Cp4.1LG19g03070 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTAAATTTTTAAAATTTTATTTATTTATTTTATTTTTTCAAGTAACGCGTTGTCGCCTTTCTTATTCAAATACTCCGTCTTCGCTGGCTTCTCTTCTTCAACGCAATCTCTGATTTTCGTTCATCTCTTGCTCCAATAGATCTCAATTCTCCCTTCACCAATTTTGATTTTCACTTTTTATTCCATCTCAAGTTTTCTAATCCTTTGATTCTCTATCCGATTTCCTTCACCCTCTCATTCTTCCTTCTTTTTGGAGGGAATTCAAATTTATCCCTCGTTGTTGAGATTACAGACGCGATTCTTCCATCCAGAGGTTTATTTTCTTGTAATTCTGTTTATGTTCGCCATGAGCGATGTTGAGTTTTCGAGGTTGATTCTTGAGTAATATGGAATTGGCTGTTGCACGGATTGAAAATGAATCTTTACATTCGTCGGGAAACTTCGAAGGTTGGTTATCTTAATTTGCTATATTACGATTTCTTATAACGCTGTTTAGTTTCTTCTTTGATGTTGCTTTTGTTTAATGTGTTTATTGTTTTTTTTTTGTTGTTGTGGCGGAAAGCTTTTGAAGAGAGTCTCCGCAGAAACCACCACGGAGATCATCCTTCTCGGAGAGAATTGGAAATATCTTCTCGGGGGACTCGTTTGTCAGGTATCCTTTAATTGTGAGAATTTTAATGGGAATTTTTCTGCAAACTCAATTGTTGGTATCCAATTTTCTGTGTAATGGTGTTTATGCTAACAATAGAATAGTTCTTGGAATCTGGATTAGAAAAGGTGTTTAAATTCTTAGAAAGTTCCAATAACATTCAAATATGCTTATAAATTTGAGAGGATAGTAATTGTTCTTTAGATGTTATGTCAAAGAGTTGAGTATATTGAAGCTTTTGTTGTTTGTTTCTTTAGTCTGTAATTTTTTCATCGTCCTCCATGTCTGACATGCGAAATATTTCTTTTGGACAGTACATACACGGTCTAGCTGCTAGAGGAGTTCATTATATACATAGGCCTGGACCTGTACTTCAGGATGTTGGCTTCTATCTTCTTCCGGTTAGTATCAAAATATTGCATCCTTTGATTTATAATTACATTATCTTCGATTTTTGTGTTTATTTTGTTTGTGTTTCGATGTAGGAGCTCGGACCCGACAAAGCTTATCTCAGTGAAACTTTGTTTTCTTTCGTCTTTTTATCCTTTTTCTTGGTGAGGTTCCACCCTTTGCTTTTGCTATTAGTTTTCTTTCATCTTTCTGTCTTGCTTGTTTTATTATCAGTCACAACAAGCATGAATTCCTGCTGGCATGTTAATATACACCTTTTGCATCAAAATTGTCTTAATGAGGCTCTGATTTCATCCTCTATTTGCTCCCCTTTTTACATTCAACATTGTTACTATGGTAATGAACTATTGTCTTTCACATTTTGTTCGAGTTCTTGAGTTTGAGCGTTCTGAACTGAGGGCTTCTTTCTAAGGCTTGAATTTTTGACATTTTGTTTCGAAGGGGGCGAAAACAATTGTCATATGAAGTATGAACAAAAGGGGTCTTTCTTGGTTGATTCCTGAAATTTTAGTACAAATTTTAGGTGGAATATAAATAAGATGCCCTTATAGTCTAATGTCCATGACATAGTTTCTCATTAAGAAAAAAACTTGATAATGATTTTGTTTTACTTTCTTTCATTTAGATGCAAATTTGGTTTTCTGATATCTATTATCTATTCATTGACATACATCGATTTTCTTGAGTGTTTCTAATGGTGGAACTTTCTGTTGCAGTGGACTTTCCATCCTTTCATTCTCAAAACTAAAAAGATCTACACAGTTCTGTTATGGTGTAGGGTTCTAGCATTTTTAGTTGTAAGTACAACTTCTACTACTTGGTTAATATTTTGACTCTAGTGGAATGATTTTCATTTTAACGTTGCCACAATCATCTCCCTTACCCCCTCACCCCACTCAAAACCTGGTTTCATGATCGGTTTCTTGAAAGAAAATATTTTAAGAACTAGATATTTTATGTTACATCCAACTTCCTTCACATTGATATTATATGCCCCTTTTACTTGTTTTTGCAGGCTTCTCAAATTCTCCGAATTCTTACATTCTACTCGACCCAACTTCCAGGTCCAAACTACCATTGCCGTGAGGTACAATTTCTACTGATATCTGAATATGGATTTGTTCATGAACTTGGTTGATCAATATAAGGTTTCTATTTTGTAATAATTTCAATATGGCTACTATAAAAGGAAAACGTAAGTGACTTTTGCACCATTTTTTTACAGGGTTCAAAGCTTGCCACGTTACCTCCCCCCAAAAGTATCCTTGAAGTTTTCTTGATATGTAAGGAATCACCACGAATGTCCAAAGTCATTAGAGATATTATATAGTTGACATTGTTCCTCATATGGTTGTTGCATTTGCAGTTCCGAGGGGTGTATTGTATGGTTGTGGAGACTTAATTTTCTCATCACACATGATCTTTACTCTTGTTTTTGTGCGCTCGTATCAGATATATGGTACTCAGAGGTATGTTCTTAAAAAATTACTGCAATACAAACAAAGAAGTGGTCAATTTTCTAGCATATTCAGCTGTGGATGCATTAAAATTTTGAAGTCTAGCTGATGGTTTGTTTTTGCGACATTTTAGGTTCATAAAGCAGTTGGCCTGGTTGCTGGCTATAGTTCAGAGCTTCTTAATTGTAGCCTCACGGAAACATTACACTGTTGATGTTGTAGTAGCATGGTATAAAAGATGGCCTTTCCTCTTGCTGACTCGTATGTTGATAATGTAGTTATGCTTTTTAATTTTTCACTTCCTAAACCGTTTAGCTTTCTGCAGGTATACGGTGAACCTAGTTGTATTCTTTGTCGATAAGAAATTGCCAGGTTAATTCTACTTTCTTATCACCCCCTTCATTTAATTCCATAGACCGTTATTGAATATTGTTACTGAAATACACAAGTTTCTTATTCCAGAACTGCCAGATCGAACCAATGTCGGTGTATCTACATTGTTACCATTGAGCACGAAAGATACCAAGACAAAAGACGAGAACCATAAGCTCATCAACGGGAACACCGGGGACTCTGCAGATAGGGTACGTATCAAGCATATATGTTCTATTCTACATATGAGAATTGCATCTTTTTCCTGACAATTACATGGTTCCACTCCAGAGGTCGAGAACTCAAGTAAATGGCAAGATTCTTGAAGAGGGAAATGCGGTTCAAATCAACGCCTCTATGAATGGTGGTGCATAGAGCAACAGTAAGTTTTTCAAATGGGCCTGGAAAAGAGATTCATATGAAACTGCTCAATCATAGATTTAGGAGGGTTGGATGAATCTGGTTTGGAATCTGTATCTGGGATTGTTGAATTGAGTTAGTAGTTTTAACTCACATTTGACCCCCACAAAAAAGAAAAAAAAAAAAAAGAAAAAAGGAGTAATTGAGTTATGCTTCTTTGAAAAATTTGCTGCATCTTTTCTCTACTTCTTCTCTGCCTTAAATAGCGCATTAAATGGATCATAAGTGTGGAGGAATTGATGGAAAATGGACAAAGCATTTAGAAAATAACACACACTAGAAAGCATTAAACAGGGTGGAAGAGAGAGCCCACATTAGAGAGCAGCAACGTTTGGAATGAAAAAGTTTGATGAAATAACATGCGGGAAAGCAGCCACATGATAATGATGTTGCCTTGTATGATGAGGATCTTGCATGTGCTGTCCCAGCTAAATTAATGCTTTTCCTGCTCATCCCCACCCTCAAACCAAATCTTTCTCTGTAGGGAAGTTCTTTGTGTGTCCTTTTTATTTTTTTTAATTTTGATCCCAACAGTATCAAACAT TTTTAAATTTTTAAAATTTTATTTATTTATTTTATTTTTTCAAGTAACGCGTTGTCGCCTTTCTTATTCAAATACTCCGTCTTCGCTGGCTTCTCTTCTTCAACGCAATCTCTGATTTTCGTTCATCTCTTGCTCCAATAGATCTCAATTCTCCCTTCACCAATTTTGATTTTCACTTTTTATTCCATCTCAAGTTTTCTAATCCTTTGATTCTCTATCCGATTTCCTTCACCCTCTCATTCTTCCTTCTTTTTGGAGGGAATTCAAATTTATCCCTCGTTGTTGAGATTACAGACGCGATTCTTCCATCCAGAGGTTTATTTTCTTGTAATTCTGTTTATGTTCGCCATGAGCGATGTTGAGTTTTCGAGGTTGATTCTTGAGTAATATGGAATTGGCTGTTGCACGGATTGAAAATGAATCTTTACATTCGTCGGGAAACTTCGAAGCTTTTGAAGAGAGTCTCCGCAGAAACCACCACGGAGATCATCCTTCTCGGAGAGAATTGGAAATATCTTCTCGGGGGACTCGTTTGTCAGTACATACACGGTCTAGCTGCTAGAGGAGTTCATTATATACATAGGCCTGGACCTGTACTTCAGGATGTTGGCTTCTATCTTCTTCCGGAGCTCGGACCCGACAAAGCTTATCTCAGTGAAACTTTGTTTTCTTTCGTCTTTTTATCCTTTTTCTTGTGGACTTTCCATCCTTTCATTCTCAAAACTAAAAAGATCTACACAGTTCTGTTATGGTGTAGGGTTCTAGCATTTTTAGTTGCTTCTCAAATTCTCCGAATTCTTACATTCTACTCGACCCAACTTCCAGGTCCAAACTACCATTGCCGTGAGGGTTCAAAGCTTGCCACGTTACCTCCCCCCAAAAGTATCCTTGAAGTTTTCTTGATATTTCCGAGGGGTGTATTGTATGGTTGTGGAGACTTAATTTTCTCATCACACATGATCTTTACTCTTGTTTTTGTGCGCTCGTATCAGATATATGGTACTCAGAGGTTCATAAAGCAGTTGGCCTGGTTGCTGGCTATAGTTCAGAGCTTCTTAATTGTAGCCTCACGGAAACATTACACTGTTGATGTTGTAGTAGCATGGTATACGGTGAACCTAGTTGTATTCTTTGTCGATAAGAAATTGCCAGAACTGCCAGATCGAACCAATGTCGGTGTATCTACATTGTTACCATTGAGCACGAAAGATACCAAGACAAAAGACGAGAACCATAAGCTCATCAACGGGAACACCGGGGACTCTGCAGATAGGAGGTCGAGAACTCAAGTAAATGGCAAGATTCTTGAAGAGGGAAATGCGGTTCAAATCAACGCCTCTATGAATGGTGGTGCATAGAGCAACAGTAAGTTTTTCAAATGGGCCTGGAAAAGAGATTCATATGAAACTGCTCAATCATAGATTTAGGAGGGTTGGATGAATCTGGTTTGGAATCTGTATCTGGGATTGTTGAATTGAGTTAGTAGTTTTAACTCACATTTGACCCCCACAAAAAAGAAAAAAAAAAAAAAGAAAAAAGGAGTAATTGAGTTATGCTTCTTTGAAAAATTTGCTGCATCTTTTCTCTACTTCTTCTCTGCCTTAAATAGCGCATTAAATGGATCATAAGTGTGGAGGAATTGATGGAAAATGGACAAAGCATTTAGAAAATAACACACACTAGAAAGCATTAAACAGGGTGGAAGAGAGAGCCCACATTAGAGAGCAGCAACGTTTGGAATGAAAAAGTTTGATGAAATAACATGCGGGAAAGCAGCCACATGATAATGATGTTGCCTTGTATGATGAGGATCTTGCATGTGCTGTCCCAGCTAAATTAATGCTTTTCCTGCTCATCCCCACCCTCAAACCAAATCTTTCTCTGTAGGGAAGTTCTTTGTGTGTCCTTTTTATTTTTTTTAATTTTGATCCCAACAGTATCAAACAT ATGAATCTTTACATTCGTCGGGAAACTTCGAAGCTTTTGAAGAGAGTCTCCGCAGAAACCACCACGGAGATCATCCTTCTCGGAGAGAATTGGAAATATCTTCTCGGGGGACTCGTTTGTCAGTACATACACGGTCTAGCTGCTAGAGGAGTTCATTATATACATAGGCCTGGACCTGTACTTCAGGATGTTGGCTTCTATCTTCTTCCGGAGCTCGGACCCGACAAAGCTTATCTCAGTGAAACTTTGTTTTCTTTCGTCTTTTTATCCTTTTTCTTGTGGACTTTCCATCCTTTCATTCTCAAAACTAAAAAGATCTACACAGTTCTGTTATGGTGTAGGGTTCTAGCATTTTTAGTTGCTTCTCAAATTCTCCGAATTCTTACATTCTACTCGACCCAACTTCCAGGTCCAAACTACCATTGCCGTGAGGGTTCAAAGCTTGCCACGTTACCTCCCCCCAAAAGTATCCTTGAAGTTTTCTTGATATTTCCGAGGGGTGTATTGTATGGTTGTGGAGACTTAATTTTCTCATCACACATGATCTTTACTCTTGTTTTTGTGCGCTCGTATCAGATATATGGTACTCAGAGGTTCATAAAGCAGTTGGCCTGGTTGCTGGCTATAGTTCAGAGCTTCTTAATTGTAGCCTCACGGAAACATTACACTGTTGATGTTGTAGTAGCATGGTATACGGTGAACCTAGTTGTATTCTTTGTCGATAAGAAATTGCCAGAACTGCCAGATCGAACCAATGTCGGTGTATCTACATTGTTACCATTGAGCACGAAAGATACCAAGACAAAAGACGAGAACCATAAGCTCATCAACGGGAACACCGGGGACTCTGCAGATAGGAGGTCGAGAACTCAAGTAAATGGCAAGATTCTTGAAGAGGGAAATGCGGTTCAAATCAACGCCTCTATGAATGGTGGTGCATAG MNLYIRRETSKLLKRVSAETTTEIILLGENWKYLLGGLVCQYIHGLAARGVHYIHRPGPVLQDVGFYLLPELGPDKAYLSETLFSFVFLSFFLWTFHPFILKTKKIYTVLLWCRVLAFLVASQILRILTFYSTQLPGPNYHCREGSKLATLPPPKSILEVFLIFPRGVLYGCGDLIFSSHMIFTLVFVRSYQIYGTQRFIKQLAWLLAIVQSFLIVASRKHYTVDVVVAWYTVNLVVFFVDKKLPELPDRTNVGVSTLLPLSTKDTKTKDENHKLINGNTGDSADRRSRTQVNGKILEEGNAVQINASMNGGA
BLAST of Cp4.1LG19g03070 vs. Swiss-Prot
Match: IPCS2_ARATH (Phosphatidylinositol:ceramide inositolphosphotransferase 2 OS=Arabidopsis thaliana GN=IPCS2 PE=2 SV=1) HSP 1 Score: 457.2 bits (1175), Expect = 1.4e-127 Identity = 232/311 (74.60%), Postives = 264/311 (84.89%), Query Frame = 1
BLAST of Cp4.1LG19g03070 vs. Swiss-Prot
Match: IPCS1_ARATH (Phosphatidylinositol:ceramide inositolphosphotransferase 1 OS=Arabidopsis thaliana GN=IPCS1 PE=2 SV=1) HSP 1 Score: 453.0 bits (1164), Expect = 2.7e-126 Identity = 228/312 (73.08%), Postives = 265/312 (84.94%), Query Frame = 1
BLAST of Cp4.1LG19g03070 vs. Swiss-Prot
Match: IPCS_ORYSI (Phosphatidylinositol:ceramide inositolphosphotransferase OS=Oryza sativa subsp. indica GN=ERH1 PE=3 SV=1) HSP 1 Score: 427.9 bits (1099), Expect = 9.3e-119 Identity = 219/327 (66.97%), Postives = 260/327 (79.51%), Query Frame = 1
BLAST of Cp4.1LG19g03070 vs. Swiss-Prot
Match: IPCS_ORYSJ (Phosphatidylinositol:ceramide inositolphosphotransferase OS=Oryza sativa subsp. japonica GN=ERH1 PE=2 SV=1) HSP 1 Score: 427.9 bits (1099), Expect = 9.3e-119 Identity = 219/327 (66.97%), Postives = 260/327 (79.51%), Query Frame = 1
BLAST of Cp4.1LG19g03070 vs. Swiss-Prot
Match: IPCS3_ARATH (Phosphatidylinositol:ceramide inositolphosphotransferase 3 OS=Arabidopsis thaliana GN=IPCS3 PE=2 SV=1) HSP 1 Score: 385.2 bits (988), Expect = 6.9e-106 Identity = 188/283 (66.43%), Postives = 232/283 (81.98%), Query Frame = 1
BLAST of Cp4.1LG19g03070 vs. TrEMBL
Match: A0A0A0KXU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G304840 PE=4 SV=1) HSP 1 Score: 583.2 bits (1502), Expect = 1.9e-163 Identity = 296/313 (94.57%), Postives = 300/313 (95.85%), Query Frame = 1
BLAST of Cp4.1LG19g03070 vs. TrEMBL
Match: M5WBZ5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008895mg PE=4 SV=1) HSP 1 Score: 509.6 bits (1311), Expect = 2.7e-141 Identity = 255/314 (81.21%), Postives = 277/314 (88.22%), Query Frame = 1
BLAST of Cp4.1LG19g03070 vs. TrEMBL
Match: A0A0B2RGX9_GLYSO (Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Glycine soja GN=glysoja_042591 PE=4 SV=1) HSP 1 Score: 501.1 bits (1289), Expect = 9.6e-139 Identity = 248/314 (78.98%), Postives = 280/314 (89.17%), Query Frame = 1
BLAST of Cp4.1LG19g03070 vs. TrEMBL
Match: I1JLW4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_U027900 PE=4 SV=1) HSP 1 Score: 500.7 bits (1288), Expect = 1.3e-138 Identity = 247/314 (78.66%), Postives = 280/314 (89.17%), Query Frame = 1
BLAST of Cp4.1LG19g03070 vs. TrEMBL
Match: A0A059A6Z6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K03013 PE=4 SV=1) HSP 1 Score: 498.0 bits (1281), Expect = 8.1e-138 Identity = 251/314 (79.94%), Postives = 277/314 (88.22%), Query Frame = 1
BLAST of Cp4.1LG19g03070 vs. TAIR10
Match: AT2G37940.1 (AT2G37940.1 Arabidopsis Inositol phosphorylceramide synthase 2) HSP 1 Score: 457.2 bits (1175), Expect = 8.0e-129 Identity = 232/311 (74.60%), Postives = 264/311 (84.89%), Query Frame = 1
BLAST of Cp4.1LG19g03070 vs. TAIR10
Match: AT3G54020.1 (AT3G54020.1 Arabidopsis Inositol phosphorylceramide synthase 1) HSP 1 Score: 453.0 bits (1164), Expect = 1.5e-127 Identity = 228/312 (73.08%), Postives = 265/312 (84.94%), Query Frame = 1
BLAST of Cp4.1LG19g03070 vs. TAIR10
Match: AT2G29525.1 (AT2G29525.1 Arabidopsis Inositol phosphorylceramide synthase 3) HSP 1 Score: 385.2 bits (988), Expect = 3.9e-107 Identity = 188/283 (66.43%), Postives = 232/283 (81.98%), Query Frame = 1
BLAST of Cp4.1LG19g03070 vs. NCBI nr
Match: gi|659069242|ref|XP_008448858.1| (PREDICTED: LOW QUALITY PROTEIN: phosphatidylinositol:ceramide inositolphosphotransferase 2 [Cucumis melo]) HSP 1 Score: 584.3 bits (1505), Expect = 1.2e-163 Identity = 295/313 (94.25%), Postives = 300/313 (95.85%), Query Frame = 1
BLAST of Cp4.1LG19g03070 vs. NCBI nr
Match: gi|449460337|ref|XP_004147902.1| (PREDICTED: phosphatidylinositol:ceramide inositolphosphotransferase 2 [Cucumis sativus]) HSP 1 Score: 583.2 bits (1502), Expect = 2.8e-163 Identity = 296/313 (94.57%), Postives = 300/313 (95.85%), Query Frame = 1
BLAST of Cp4.1LG19g03070 vs. NCBI nr
Match: gi|595826563|ref|XP_007205594.1| (hypothetical protein PRUPE_ppa008895mg [Prunus persica]) HSP 1 Score: 509.6 bits (1311), Expect = 3.9e-141 Identity = 255/314 (81.21%), Postives = 277/314 (88.22%), Query Frame = 1
BLAST of Cp4.1LG19g03070 vs. NCBI nr
Match: gi|645220374|ref|XP_008239977.1| (PREDICTED: phosphatidylinositol:ceramide inositolphosphotransferase 1 [Prunus mume]) HSP 1 Score: 508.4 bits (1308), Expect = 8.6e-141 Identity = 254/314 (80.89%), Postives = 277/314 (88.22%), Query Frame = 1
BLAST of Cp4.1LG19g03070 vs. NCBI nr
Match: gi|734403491|gb|KHN32515.1| (Phosphatidylcholine:ceramide cholinephosphotransferase 1 [Glycine soja]) HSP 1 Score: 501.1 bits (1289), Expect = 1.4e-138 Identity = 248/314 (78.98%), Postives = 280/314 (89.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|