Cp4.1LG19g02740 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG19g02740
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing family protein
LocationCp4.1LG19 : 2261592 .. 2263697 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGAGCTCCCCAAAGTCCTATCCCCTAGACTGGTTCTAAAGCTCCTCAAAGCAGAGAAAAACCCCAATTCGGCGCTCGCTCTGTTCGATTCGGCGTCTCAGCATCCTGGTTATGCTCATTCACCATTCGTGTTCCAACACATTCTCCGGCGACTTATTGATCCGAAGCTCGTTGTTCACGTTGGTCGGATTGTCGAGCTGATACAAGCTCAGAGATGCATCTGCTCCGAAGATGTTGCGCTGACGGCTATCAAAGCATATACTAAGTGTTCGATGCCCGATGATGCTCTGCATTTGTTTCAGCGAATGGTAGACATTTTTGGGTGTAAACCGGGAATTAGGTCATATAATTCTATGCTTAATGCGTTCATTGAATCTAATCAATGGAGCCGTGCTGAACTGTTTTTCACATACTTTCAGACGGTGGGCATGTCGCCCAATCTGCAAACATATAATATTTTGATCAAGATATCGTGCAAGAAGAAGCAATTTGAGAAGGCGAAGAGGTTGTTGAATTGGATATCGGAGAAGGGTTTGAGCCCAAATGTTTTCAGCTATGGTACTTTAATTAATGCACTTGCTAAGAGTGGTAACCTATCGGATGCCCTGAACCTGTTCGATGAAATGTCTGAGAGAGGGGTGAACCCTGATGTTATGTGTTATAATATTCTGATTGATGGGTTTTTCAGGAAAGGAGATTTCGTGAAGGCTAGTGAGGTTTGGGAGAGATTACTGAGGGAATCTTCAGTTTATCCGAGTGTGGCGACATATAACATTATGATTAATGGTTTATGTAAGCTGGGGAAGTTCGATGAGAGTATGGAGATATGGAATAGAATGAAGAAGAACAAAAGGTCACTTGACTTATTTACTTATTGCTCTATGATCCATGGCTTGAGCAAAGCAGGAAACTTCGATGCTGCTGAGAGAGTTTTTCAGGAGATGGTTGACGTTGGGTTATCCCCTGATGTGACAACATATAATACAATGCTAAGTGCTCTATTTCAAGCCGGTAAGCTAAGTAAATGCTTTGAGTTATGGGAGCTTATGAGTAAGAATAACTGTTGCAATATTGTCAGCTATAACATATTCATTCAAGGGTTGTTTGGCAACAAGAAAGTGGAAGAAGCGATTTGTAACTGGCAGCTCTTACATGAGAGAGGCTTTACTGCAGATTCAACTACTTATGGACTGTTGATTCACGGGTTGTGTAAAAATGGATACTTGAATAAGGCTTTAAGGATATTAAAAGAAGCAGAAAATGAGGGAGCTGATTTGGATATATTTGCGTACTCCTCGATGATCGATGGGTTATGCAAAGAAGCGAGGTTGGATCAAGCGGTCGAGCTGGTTCATCAGATGAACACACATAAACATAAACTGAATTCTTATGTCTTCAATTCACTGATTAATGGATATGTCCGAGCTTCTAAGCTTGAGGAGGCTATTTTTCTTTTAAGGGAAATGAGCAAGAAAGGCTGTTCTCCTACTGTGGTCTCCTACAACACTCTTATCAATGGACTATGCAAGGCAGAAAGATTTAGCGATGCATATCTTTTTCTGAAGGAGATGCTGGAAAAGGGTTTGAAGCCTGATATGATTACCTATAGCTTATTGATTGATGGCCTTTGTCGAGGAGATAAGCTCGACATGGCACTCAACTTATGGCATCAATGTATCGACAAGGGTCTTAAGCCCGATGTAACCATACACAACATAATAATTCATGGTCTTTGTACGGCCCGGAAAGTCGATGTTGCGCTGAAATTTTTTACTGAAATGGCACAGGTGAACTGTGTTCCTGATCTTGTAACACACAACACCATCATGGAAGGCCTTTACAAGGTCGGAGACTGCGTAGAGGCTTTAAAAATTTGGGACCGTATCTTGGAAGAGGGTCTTCAGCCAGATATTCTTTCTTATAACATTACCTTTAAGGGACTCTGTTCTTGTGCTAGAGTTTCAGATGCCATTGGATTCCTATATGATGCTTTGAAACATGGAGTTCTTCCGACTGCCCCAACATGGGACATTCTTGTAAGAGCTGTTGTTGATGATAGACCTTTAATGGAATATGCTCTTGTTTCAGAGTCTAGGACGTGA

mRNA sequence

ATGGTTGAGCTCCCCAAAGTCCTATCCCCTAGACTGGTTCTAAAGCTCCTCAAAGCAGAGAAAAACCCCAATTCGGCGCTCGCTCTGTTCGATTCGGCGTCTCAGCATCCTGGTTATGCTCATTCACCATTCGTGTTCCAACACATTCTCCGGCGACTTATTGATCCGAAGCTCGTTGTTCACGTTGGTCGGATTGTCGAGCTGATACAAGCTCAGAGATGCATCTGCTCCGAAGATGTTGCGCTGACGGCTATCAAAGCATATACTAAGTGTTCGATGCCCGATGATGCTCTGCATTTGTTTCAGCGAATGGTAGACATTTTTGGGTGTAAACCGGGAATTAGGTCATATAATTCTATGCTTAATGCGTTCATTGAATCTAATCAATGGAGCCGTGCTGAACTGTTTTTCACATACTTTCAGACGGTGGGCATGTCGCCCAATCTGCAAACATATAATATTTTGATCAAGATATCGTGCAAGAAGAAGCAATTTGAGAAGGCGAAGAGGTTGTTGAATTGGATATCGGAGAAGGGTTTGAGCCCAAATGTTTTCAGCTATGGTACTTTAATTAATGCACTTGCTAAGAGTGGTAACCTATCGGATGCCCTGAACCTGTTCGATGAAATGTCTGAGAGAGGGGTGAACCCTGATGTTATGTGTTATAATATTCTGATTGATGGGTTTTTCAGGAAAGGAGATTTCGTGAAGGCTAGTGAGGTTTGGGAGAGATTACTGAGGGAATCTTCAGTTTATCCGAGTGTGGCGACATATAACATTATGATTAATGGTTTATGTAAGCTGGGGAAGTTCGATGAGAGTATGGAGATATGGAATAGAATGAAGAAGAACAAAAGGTCACTTGACTTATTTACTTATTGCTCTATGATCCATGGCTTGAGCAAAGCAGGAAACTTCGATGCTGCTGAGAGAGTTTTTCAGGAGATGGTTGACGTTGGGTTATCCCCTGATGTGACAACATATAATACAATGCTAAGTGCTCTATTTCAAGCCGGTAAGCTAAGTAAATGCTTTGAGTTATGGGAGCTTATGAGTAAGAATAACTGTTGCAATATTGTCAGCTATAACATATTCATTCAAGGGTTGTTTGGCAACAAGAAAGTGGAAGAAGCGATTTGTAACTGGCAGCTCTTACATGAGAGAGGCTTTACTGCAGATTCAACTACTTATGGACTGTTGATTCACGGGTTGTGTAAAAATGGATACTTGAATAAGGCTTTAAGGATATTAAAAGAAGCAGAAAATGAGGGAGCTGATTTGGATATATTTGCGTACTCCTCGATGATCGATGGGTTATGCAAAGAAGCGAGGTTGGATCAAGCGGTCGAGCTGGTTCATCAGATGAACACACATAAACATAAACTGAATTCTTATGTCTTCAATTCACTGATTAATGGATATGTCCGAGCTTCTAAGCTTGAGGAGGCTATTTTTCTTTTAAGGGAAATGAGCAAGAAAGGCTGTTCTCCTACTGTGGTCTCCTACAACACTCTTATCAATGGACTATGCAAGGCAGAAAGATTTAGCGATGCATATCTTTTTCTGAAGGAGATGCTGGAAAAGGGTTTGAAGCCTGATATGATTACCTATAGCTTATTGATTGATGGCCTTTGTCGAGGAGATAAGCTCGACATGGCACTCAACTTATGGCATCAATGTATCGACAAGGGTCTTAAGCCCGATGTAACCATACACAACATAATAATTCATGGTCTTTGTACGGCCCGGAAAGTCGATGTTGCGCTGAAATTTTTTACTGAAATGGCACAGGTGAACTGTGTTCCTGATCTTGTAACACACAACACCATCATGGAAGGCCTTTACAAGGTCGGAGACTGCGTAGAGGCTTTAAAAATTTGGGACCGTATCTTGGAAGAGGGTCTTCAGCCAGATATTCTTTCTTATAACATTACCTTTAAGGGACTCTGTTCTTGTGCTAGAGTTTCAGATGCCATTGGATTCCTATATGATGCTTTGAAACATGGAGTTCTTCCGACTGCCCCAACATGGGACATTCTTGTAAGAGCTGTTGTTGATGATAGACCTTTAATGGAATATGCTCTTGTTTCAGAGTCTAGGACGTGA

Coding sequence (CDS)

ATGGTTGAGCTCCCCAAAGTCCTATCCCCTAGACTGGTTCTAAAGCTCCTCAAAGCAGAGAAAAACCCCAATTCGGCGCTCGCTCTGTTCGATTCGGCGTCTCAGCATCCTGGTTATGCTCATTCACCATTCGTGTTCCAACACATTCTCCGGCGACTTATTGATCCGAAGCTCGTTGTTCACGTTGGTCGGATTGTCGAGCTGATACAAGCTCAGAGATGCATCTGCTCCGAAGATGTTGCGCTGACGGCTATCAAAGCATATACTAAGTGTTCGATGCCCGATGATGCTCTGCATTTGTTTCAGCGAATGGTAGACATTTTTGGGTGTAAACCGGGAATTAGGTCATATAATTCTATGCTTAATGCGTTCATTGAATCTAATCAATGGAGCCGTGCTGAACTGTTTTTCACATACTTTCAGACGGTGGGCATGTCGCCCAATCTGCAAACATATAATATTTTGATCAAGATATCGTGCAAGAAGAAGCAATTTGAGAAGGCGAAGAGGTTGTTGAATTGGATATCGGAGAAGGGTTTGAGCCCAAATGTTTTCAGCTATGGTACTTTAATTAATGCACTTGCTAAGAGTGGTAACCTATCGGATGCCCTGAACCTGTTCGATGAAATGTCTGAGAGAGGGGTGAACCCTGATGTTATGTGTTATAATATTCTGATTGATGGGTTTTTCAGGAAAGGAGATTTCGTGAAGGCTAGTGAGGTTTGGGAGAGATTACTGAGGGAATCTTCAGTTTATCCGAGTGTGGCGACATATAACATTATGATTAATGGTTTATGTAAGCTGGGGAAGTTCGATGAGAGTATGGAGATATGGAATAGAATGAAGAAGAACAAAAGGTCACTTGACTTATTTACTTATTGCTCTATGATCCATGGCTTGAGCAAAGCAGGAAACTTCGATGCTGCTGAGAGAGTTTTTCAGGAGATGGTTGACGTTGGGTTATCCCCTGATGTGACAACATATAATACAATGCTAAGTGCTCTATTTCAAGCCGGTAAGCTAAGTAAATGCTTTGAGTTATGGGAGCTTATGAGTAAGAATAACTGTTGCAATATTGTCAGCTATAACATATTCATTCAAGGGTTGTTTGGCAACAAGAAAGTGGAAGAAGCGATTTGTAACTGGCAGCTCTTACATGAGAGAGGCTTTACTGCAGATTCAACTACTTATGGACTGTTGATTCACGGGTTGTGTAAAAATGGATACTTGAATAAGGCTTTAAGGATATTAAAAGAAGCAGAAAATGAGGGAGCTGATTTGGATATATTTGCGTACTCCTCGATGATCGATGGGTTATGCAAAGAAGCGAGGTTGGATCAAGCGGTCGAGCTGGTTCATCAGATGAACACACATAAACATAAACTGAATTCTTATGTCTTCAATTCACTGATTAATGGATATGTCCGAGCTTCTAAGCTTGAGGAGGCTATTTTTCTTTTAAGGGAAATGAGCAAGAAAGGCTGTTCTCCTACTGTGGTCTCCTACAACACTCTTATCAATGGACTATGCAAGGCAGAAAGATTTAGCGATGCATATCTTTTTCTGAAGGAGATGCTGGAAAAGGGTTTGAAGCCTGATATGATTACCTATAGCTTATTGATTGATGGCCTTTGTCGAGGAGATAAGCTCGACATGGCACTCAACTTATGGCATCAATGTATCGACAAGGGTCTTAAGCCCGATGTAACCATACACAACATAATAATTCATGGTCTTTGTACGGCCCGGAAAGTCGATGTTGCGCTGAAATTTTTTACTGAAATGGCACAGGTGAACTGTGTTCCTGATCTTGTAACACACAACACCATCATGGAAGGCCTTTACAAGGTCGGAGACTGCGTAGAGGCTTTAAAAATTTGGGACCGTATCTTGGAAGAGGGTCTTCAGCCAGATATTCTTTCTTATAACATTACCTTTAAGGGACTCTGTTCTTGTGCTAGAGTTTCAGATGCCATTGGATTCCTATATGATGCTTTGAAACATGGAGTTCTTCCGACTGCCCCAACATGGGACATTCTTGTAAGAGCTGTTGTTGATGATAGACCTTTAATGGAATATGCTCTTGTTTCAGAGTCTAGGACGTGA

Protein sequence

MVELPKVLSPRLVLKLLKAEKNPNSALALFDSASQHPGYAHSPFVFQHILRRLIDPKLVVHVGRIVELIQAQRCICSEDVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSMLNAFIESNQWSRAELFFTYFQTVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKGLSPNVFSYGTLINALAKSGNLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKASEVWERLLRESSVYPSVATYNIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHGLSKAGNFDAAERVFQEMVDVGLSPDVTTYNTMLSALFQAGKLSKCFELWELMSKNNCCNIVSYNIFIQGLFGNKKVEEAICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKEAENEGADLDIFAYSSMIDGLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASKLEEAIFLLREMSKKGCSPTVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSLLIDGLCRGDKLDMALNLWHQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVNCVPDLVTHNTIMEGLYKVGDCVEALKIWDRILEEGLQPDILSYNITFKGLCSCARVSDAIGFLYDALKHGVLPTAPTWDILVRAVVDDRPLMEYALVSESRT
Homology
[Close]
BLAST of Cp4.1LG19g02740 vs. Swiss-Prot
Match: PP221_ARATH (Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1)

HSP 1 Score: 834.7 bits (2155), Expect = 7.4e-241
Identity = 399/686 (58.16%), Postives = 509/686 (74.20%), Query Frame = 1 

Query: 1   MVELPKVLSPRLVLKLLKAEKNPNSALALFDSASQHPGYAHSPFVFQHILRRLIDPKLVV 60
           MV  PK LSP+ VLKLLK+EKNP +A ALFDSA++HPGYAHS  V+ HILRRL + ++V 
Sbjct: 1   MVVFPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVN 60

Query: 61  HVGRIVELIQAQRCICSEDVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSM 120
           HV RIVELI++Q C C EDVAL+ IK Y K SMPD AL +F+RM +IFGC+P IRSYN++
Sbjct: 61  HVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTL 120

Query: 121 LNAFIESNQWSRAELFFTYFQTVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKGL 180
           LNAF+E+ QW + E  F YF+T G++PNLQTYN+LIK+SCKKK+FEKA+  L+W+ ++G 
Sbjct: 121 LNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGF 180

Query: 181 SPNVFSYGTLINALAKSGNLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKASE 240
            P+VFSY T+IN LAK+G L DAL LFDEMSERGV PDV CYNILIDGF ++ D   A E
Sbjct: 181 KPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAME 240

Query: 241 VWERLLRESSVYPSVATYNIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHGL 300
           +W+RLL +SSVYP+V T+NIMI+GL K G+ D+ ++IW RMK+N+R  DL+TY S+IHGL
Sbjct: 241 LWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGL 300

Query: 301 SKAGNFDAAERVFQEMVDVGLSPDVTTYNTMLSALFQAGKLSKCFELWELMSKNNCCNIV 360
             AGN D AE VF E+ +   S DV TYNTML    + GK+ +  ELW +M   N  NIV
Sbjct: 301 CDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV 360

Query: 361 SYNIFIQGLFGNKKVEEAICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKEA 420
           SYNI I+GL  N K++EA   W+L+  +G+ AD TTYG+ IHGLC NGY+NKAL +++E 
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420

Query: 421 ENEGADLDIFAYSSMIDGLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASKL 480
           E+ G  LD++AY+S+ID LCK+ RL++A  LV +M+ H  +LNS+V N+LI G +R S+L
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480

Query: 481 EEAIFLLREMSKKGCSPTVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSLL 540
            EA F LREM K GC PTVVSYN LI GLCKA +F +A  F+KEMLE G KPD+ TYS+L
Sbjct: 481 GEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540

Query: 541 IDGLCRGDKLDMALNLWHQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVNC 600
           + GLCR  K+D+AL LWHQ +  GL+ DV +HNI+IHGLC+  K+D A+     M   NC
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600

Query: 601 VPDLVTHNTIMEGLYKVGDCVEALKIWDRILEEGLQPDILSYNITFKGLCSCARVSDAIG 660
             +LVT+NT+MEG +KVGD   A  IW  + + GLQPDI+SYN   KGLC C  VS A+ 
Sbjct: 601 TANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAME 660

Query: 661 FLYDALKHGVLPTAPTWDILVRAVVD 687
           F  DA  HG+ PT  TW+ILVRAVV+
Sbjct: 661 FFDDARNHGIFPTVYTWNILVRAVVN 686

[Close]
BLAST of Cp4.1LG19g02740 vs. Swiss-Prot
Match: PP281_ARATH (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 2.8e-91
Identity = 190/640 (29.69%), Postives = 331/640 (51.72%), Query Frame = 1 

Query: 13  VLKLLKAEKNPNSALALFDSASQHPGYAHSPFVFQHILRRLIDPKLVVHVGRIVELIQAQ 72
           +L  L+++ + ++AL LF+ AS+ P ++  P +++ IL RL        + +I+E +++ 
Sbjct: 53  LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112

Query: 73  RCICSEDVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSMLNAFIESNQWSR 132
           RC       L  I++Y +  + D+ L +   M+D FG KP    YN MLN  ++ N    
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKL 172

Query: 133 AELFFTYFQTVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKGLSPNVFSYGTLIN 192
            E+        G+ P++ T+N+LIK  C+  Q   A  +L  +   GL P+  ++ T++ 
Sbjct: 173 VEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQ 232

Query: 193 ALAKSGNLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKASEVWERLLRESSVY 252
              + G+L  AL + ++M E G +   +  N+++ GF ++G    A    + +  +   +
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292

Query: 253 PSVATYNIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHGLSKAGNFDAAERV 312
           P   T+N ++NGLCK G    ++EI + M +     D++TY S+I GL K G    A  V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352

Query: 313 FQEMVDVGLSPDVTTYNTMLSALFQAGKLSKCFELWE-LMSKNNCCNIVSYNIFIQGLFG 372
             +M+    SP+  TYNT++S L +  ++ +  EL   L SK    ++ ++N  IQGL  
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412

Query: 373 NKKVEEAICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKEAENEGADLDIFA 432
            +    A+  ++ +  +G   D  TY +LI  LC  G L++AL +LK+ E  G    +  
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472

Query: 433 YSSMIDGLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASKLEEAIFLLREMS 492
           Y+++IDG CK  +  +A E+  +M  H    NS  +N+LI+G  ++ ++E+A  L+ +M 
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532

Query: 493 KKGCSPTVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSLLIDGLCRGDKLD 552
            +G  P   +YN+L+   C+      A   ++ M   G +PD++TY  LI GLC+  +++
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592

Query: 553 MALNLWHQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVN-CVPDLVTHNTI 612
           +A  L      KG+      +N +I GL   RK   A+  F EM + N   PD V++  +
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652

Query: 613 MEGLYKVGDCV-EALKIWDRILEEGLQPDILSYNITFKGL 650
             GL   G  + EA+     +LE+G  P+  S  +  +GL
Sbjct: 653 FRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692

[Close]
BLAST of Cp4.1LG19g02740 vs. Swiss-Prot
Match: PP120_ARATH (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.8e-83
Identity = 186/685 (27.15%), Postives = 349/685 (50.95%), Query Frame = 1 

Query: 8   LSPRLVLKLLKAEKNPNSALALFDSASQHPGYAHSPFVFQHILRRL-IDPKLVVHVGRIV 67
           L P+ V  ++K +K+P  AL +F+S  +  G+ H+   ++ ++ +L    K       +V
Sbjct: 5   LLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLV 64

Query: 68  ELIQAQRCICSEDVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSMLNAFIE 127
           ++ +       E V + A+K Y +     +A+++F+RM D + C+P + SYN++++  ++
Sbjct: 65  DMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVLVD 124

Query: 128 SNQWSRAELFFTYFQTVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKGLSPNVFS 187
           S  + +A   +   +  G++P++ ++ I +K  CK  +   A RLLN +S +G   NV +
Sbjct: 125 SGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVA 184

Query: 188 YGTLINALAKSGNLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKASEVWERLL 247
           Y T++    +    ++   LF +M   GV+  +  +N L+    +KGD  +  ++ ++++
Sbjct: 185 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 244

Query: 248 RESSVYPSVATYNIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHGLSKAGNF 307
           +   V P++ TYN+ I GLC+ G+ D ++ +   + +     D+ TY ++I+GL K   F
Sbjct: 245 KRG-VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKF 304

Query: 308 DAAERVFQEMVDVGLSPDVTTYNTMLSALFQAGKLSKCFEL-WELMSKNNCCNIVSYNIF 367
             AE    +MV+ GL PD  TYNT+++   + G +     +  + +      +  +Y   
Sbjct: 305 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 364

Query: 368 IQGLFGNKKVEEAICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKEAENEGA 427
           I GL    +   A+  +     +G   +   Y  LI GL   G + +A ++  E   +G 
Sbjct: 365 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 424

Query: 428 DLDIFAYSSMIDGLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASKLEEAIF 487
             ++  ++ +++GLCK   +  A  LV  M +  +  + + FN LI+GY    K+E A+ 
Sbjct: 425 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 484

Query: 488 LLREMSKKGCSPTVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSLLIDGLC 547
           +L  M   G  P V +YN+L+NGLCK  +F D     K M+EKG  P++ T+++L++ LC
Sbjct: 485 ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC 544

Query: 548 RGDKLDMALNLWHQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVNCVPDLV 607
           R  KLD AL L  +  +K + PD      +I G C    +D A   F +M +   V    
Sbjct: 545 RYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSST 604

Query: 608 -THNTIMEGLYKVGDCVEALKIWDRILEEGLQPDILSYNITFKGLCSCARVSDAIGFLYD 667
            T+N I+    +  +   A K++  +++  L PD  +Y +   G C    V+    FL +
Sbjct: 605 PTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLE 664

Query: 668 ALKHGVLPTAPTWDILVRAV-VDDR 689
            +++G +P+  T   ++  + V+DR
Sbjct: 665 MMENGFIPSLTTLGRVINCLCVEDR 687

[Close]
BLAST of Cp4.1LG19g02740 vs. Swiss-Prot
Match: PP217_ARATH (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.1e-82
Identity = 183/653 (28.02%), Postives = 328/653 (50.23%), Query Frame = 1 

Query: 19  AEKNPNSALALFDSASQHPGYAHSPFVFQHILRRLIDPKLVVHVGRIVELIQAQRCICSE 78
           A  + +  L LF    Q  GY  +  +F  ++R       V     +++ +++       
Sbjct: 180 AVNHSDMMLTLFQQM-QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADI 239

Query: 79  DVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSMLNAFIESNQWSRAELFFT 138
            +    I ++ K    D A   F   ++  G KP   +Y SM+    ++N+   A   F 
Sbjct: 240 VLYNVCIDSFGKVGKVDMAWKFFHE-IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFE 299

Query: 139 YFQTVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKGLSPNVFSYGTLINALAKSG 198
           + +     P    YN +I       +F++A  LL     KG  P+V +Y  ++  L K G
Sbjct: 300 HLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMG 359

Query: 199 NLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKASEVWERLLRESSVYPSVATY 258
            + +AL +F+EM ++   P++  YNILID   R G    A E+ + + +++ ++P+V T 
Sbjct: 360 KVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSM-QKAGLFPNVRTV 419

Query: 259 NIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHGLSKAGNFDAAERVFQEMVD 318
           NIM++ LCK  K DE+  ++  M     + D  T+CS+I GL K G  D A +V+++M+D
Sbjct: 420 NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 479

Query: 319 VGLSPDVTTYNTMLSALFQAGKLSKCFELWELMSKNNCC-NIVSYNIFIQGLFGNKKVEE 378
                +   Y +++   F  G+     ++++ M   NC  ++   N ++  +F   + E+
Sbjct: 480 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEK 539

Query: 379 AICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKEAENEGADLDIFAYSSMID 438
               ++ +  R F  D+ +Y +LIHGL K G+ N+   +    + +G  LD  AY+ +ID
Sbjct: 540 GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVID 599

Query: 439 GLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASKLEEAIFLLREMSKKGCSP 498
           G CK  ++++A +L+ +M T   +     + S+I+G  +  +L+EA  L  E   K    
Sbjct: 600 GFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 659

Query: 499 TVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSLLIDGLCRGDKLDMALNLW 558
            VV Y++LI+G  K  R  +AYL L+E+++KGL P++ T++ L+D L + ++++ AL  +
Sbjct: 660 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCF 719

Query: 559 HQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVNCVPDLVTHNTIMEGLYKV 618
               +    P+   + I+I+GLC  RK + A  F+ EM +    P  +++ T++ GL K 
Sbjct: 720 QSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKA 779

Query: 619 GDCVEALKIWDRILEEGLQPDILSYNITFKGLCSCARVSDAIGFLYDALKHGV 671
           G+  EA  ++DR    G  PD   YN   +GL +  R  DA     +  + G+
Sbjct: 780 GNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828

[Close]
BLAST of Cp4.1LG19g02740 vs. Swiss-Prot
Match: PP444_ARATH (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.4e-82
Identity = 179/644 (27.80%), Postives = 328/644 (50.93%), Query Frame = 1 

Query: 8   LSPRLVLKLLKAEKNPNSALALFDSASQHPGYAHSPFVFQHILRRLIDPKLVVHVGRIVE 67
           ++P  + KLL+   N ++++ LF       GY HS  V+Q ++ +L        + R++ 
Sbjct: 76  ITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLI 135

Query: 68  LIQAQRCICSEDVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSMLNAFIES 127
            ++ +  +  E + ++ ++ Y K   P     L   M +++ C+P  +SYN +L   +  
Sbjct: 136 QMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSG 195

Query: 128 NQWSRAELFFTYFQTVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKGLSPNVFSY 187
           N    A   F    +  + P L T+ +++K  C   + + A  LL  +++ G  PN   Y
Sbjct: 196 NCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIY 255

Query: 188 GTLINALAKSGNLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKASEVWERLLR 247
            TLI++L+K   +++AL L +EM   G  PD   +N +I G  +     +A+++  R+L 
Sbjct: 256 QTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI 315

Query: 248 ESSVYPSVATYNIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHGLSKAGNFD 307
                P   TY  ++NGLCK+G+ D + +++ R+ K     ++  + ++IHG    G  D
Sbjct: 316 RGFA-PDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP----EIVIFNTLIHGFVTHGRLD 375

Query: 308 AAERVFQEMV-DVGLSPDVTTYNTMLSALFQAGKLSKCFELWELMSKNNCC-NIVSYNIF 367
            A+ V  +MV   G+ PDV TYN+++   ++ G +    E+   M    C  N+ SY I 
Sbjct: 376 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL 435

Query: 368 IQGLFGNKKVEEAICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKEAENEGA 427
           + G     K++EA      +   G   ++  +  LI   CK   + +A+ I +E   +G 
Sbjct: 436 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 495

Query: 428 DLDIFAYSSMIDGLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASKLEEAIF 487
             D++ ++S+I GLC+   +  A+ L+  M +     N+  +N+LIN ++R  +++EA  
Sbjct: 496 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 555

Query: 488 LLREMSKKGCSPTVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSLLIDGLC 547
           L+ EM  +G     ++YN+LI GLC+A     A    ++ML  G  P  I+ ++LI+GLC
Sbjct: 556 LVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC 615

Query: 548 RGDKLDMALNLWHQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVNCVPDLV 607
           R   ++ A+    + + +G  PD+   N +I+GLC A +++  L  F ++      PD V
Sbjct: 616 RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 675

Query: 608 THNTIMEGLYKVGDCVEALKIWDRILEEGLQPDILSYNITFKGL 650
           T NT+M  L K G   +A  + D  +E+G  P+  +++I  + +
Sbjct: 676 TFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714

[Close]
BLAST of Cp4.1LG19g02740 vs. TrEMBL
Match: A0A0A0KXH4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G308460 PE=4 SV=1)

HSP 1 Score: 1208.4 bits (3125), Expect = 0.0e+00
Identity = 579/701 (82.60%), Postives = 638/701 (91.01%), Query Frame = 1 

Query: 1   MVELPKVLSPRLVLKLLKAEKNPNSALALFDSASQHPGYAHSPFVFQHILRRLIDPKLVV 60
           MVELPKV+SP LVLKLLKAEKNPN+ALA+FDSA QHPGYAH PFVF HILRRL+DPKLVV
Sbjct: 1   MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVV 60

Query: 61  HVGRIVELIQAQRCICSEDVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSM 120
           HVGRIV+L++AQRC CSEDVAL+AIKAY KCSMPD AL+LFQ MVDIFGC PGIRS+NSM
Sbjct: 61  HVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM 120

Query: 121 LNAFIESNQWSRAELFFTYFQTVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKGL 180
           LNAFIESNQW  AELFFTYFQT GMSPNLQTYNILIKISCKK+QFEK K LL W+ E GL
Sbjct: 121 LNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGL 180

Query: 181 SPNVFSYGTLINALAKSGNLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKASE 240
           +P++ SYGTLINALAKSGNL DA+ LFDEMS RGVNPDVMCYNILIDGF RKGDFVKA+E
Sbjct: 181 NPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANE 240

Query: 241 VWERLLRESSVYPSVATYNIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHGL 300
           +W+RLL ESSVYPSV TYNIMINGLCKLGK DESME+WNRMKKN++S DLFT+ SMIHGL
Sbjct: 241 IWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGL 300

Query: 301 SKAGNFDAAERVFQEMVDVGLSPDVTTYNTMLSALFQAGKLSKCFELWELMSKNNCCNIV 360
           SKAGNF+AAE+VFQEM++ GLSPDV TYN MLS LF+ GKL+KCFELW +MSKNNCCNIV
Sbjct: 301 SKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIV 360

Query: 361 SYNIFIQGLFGNKKVEEAICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKEA 420
           SYN+ IQGL  NKKVE+AIC WQLLHERG  ADSTTYGLLI+GLCKNGYLNKALRIL+EA
Sbjct: 361 SYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEA 420

Query: 421 ENEGADLDIFAYSSMIDGLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASKL 480
           ENEGADLD FAYSSM+ GLCK+  L+QAVEL+HQM  ++ KLNS+VFNSLINGYVRA KL
Sbjct: 421 ENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKL 480

Query: 481 EEAIFLLREMSKKGCSPTVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSLL 540
           EEAI +LREM  K C+PTVVSYNT+INGLCKAERFSDAYL LKEMLE+GLKPDMITYSLL
Sbjct: 481 EEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLL 540

Query: 541 IDGLCRGDKLDMALNLWHQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVNC 600
           IDGLCRG+K+DMALNLWHQCI+K LKPD+ +HNIIIHGLCTA+KVDVAL+ FT+M QVNC
Sbjct: 541 IDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNC 600

Query: 601 VPDLVTHNTIMEGLYKVGDCVEALKIWDRILEEGLQPDILSYNITFKGLCSCARVSDAIG 660
           VPDLVTHNTIMEGLYK GDCVEALKIWDRILE GLQPDI+SYNITFKGLCSCARVSDAI 
Sbjct: 601 VPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIE 660

Query: 661 FLYDALKHGVLPTAPTWDILVRAVVDDRPLMEYALVSESRT 702
           FLYDAL  G+LP APTW++LVRAVVDD+PLMEYAL +ESRT
Sbjct: 661 FLYDALDRGILPNAPTWNVLVRAVVDDKPLMEYALNTESRT 701

[Close]
BLAST of Cp4.1LG19g02740 vs. TrEMBL
Match: M5WHA8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002297mg PE=4 SV=1)

HSP 1 Score: 999.2 bits (2582), Expect = 2.5e-288
Identity = 481/687 (70.01%), Postives = 572/687 (83.26%), Query Frame = 1 

Query: 1   MVELPKVLSPRLVLKLLKAEKNPNSALALFDSASQHPGYAHSPFVFQHILRRLIDPKLVV 60
           MV+ PK LSP+ VLKLL+AEKNP+SALAL DSAS+HP Y HSP VF HILRRL+DPKLV 
Sbjct: 1   MVDFPKSLSPKRVLKLLQAEKNPHSALALLDSASRHPNYNHSPDVFHHILRRLLDPKLVA 60

Query: 61  HVGRIVELIQAQRCICSEDVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSM 120
           HV R+VELI+ Q+C C EDVALT IKAY K SMPD AL +FQ+M +IFGC PGIRSYNS+
Sbjct: 61  HVDRVVELIRTQKCKCPEDVALTVIKAYAKNSMPDKALAVFQQMEEIFGCAPGIRSYNSL 120

Query: 121 LNAFIESNQWSRAELFFTYFQTVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKGL 180
           LNAFIESNQW RAE FF YF+TVG+SPNLQTYNILIKISCKKKQFEKAK LL+W+ EKGL
Sbjct: 121 LNAFIESNQWERAEKFFAYFETVGLSPNLQTYNILIKISCKKKQFEKAKALLSWMWEKGL 180

Query: 181 SPNVFSYGTLINALAKSGNLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKASE 240
            P+VFSYGTLIN LAKSGNL DAL +FDEM ERGV+PDVMCYNILIDGFFRKGD V A+E
Sbjct: 181 KPDVFSYGTLINGLAKSGNLCDALEVFDEMVERGVSPDVMCYNILIDGFFRKGDSVNANE 240

Query: 241 VWERLLRESSVYPSVATYNIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHGL 300
           +W+RL+R+S VYP+V TYN+MI+GLCK GKFDE +EIWNRMKKN R  DLFT  S+I  L
Sbjct: 241 IWDRLVRDSEVYPNVVTYNVMIDGLCKCGKFDEGLEIWNRMKKNDRGPDLFTCSSLIQRL 300

Query: 301 SKAGNFDAAERVFQEMVDVGLSPDVTTYNTMLSALFQAGKLSKCFELWELMSKNNCCNIV 360
           S+AGN D AERV++EMV  GLSPDV  YN ML+    AGK+ +CFEL E+M K+ C N+V
Sbjct: 301 SEAGNVDGAERVYKEMVGKGLSPDVVVYNAMLNGFCLAGKVKECFELREVMEKHGCHNVV 360

Query: 361 SYNIFIQGLFGNKKVEEAICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKEA 420
           SYNIFI+GLF N KVEEAI  W+L+HE+G  ADSTTYG+LIHGLCKNGYLNKAL ILKE 
Sbjct: 361 SYNIFIRGLFENGKVEEAISVWELMHEKGCVADSTTYGVLIHGLCKNGYLNKALWILKEG 420

Query: 421 ENEGADLDIFAYSSMIDGLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASKL 480
           EN  ADLD FAYSSMI+ LCKE +LD+A  LV QM+   ++ NS+V N+LI G++RASKL
Sbjct: 421 ENTRADLDAFAYSSMINWLCKEGKLDEAARLVGQMDKCGYEPNSHVCNALIYGFIRASKL 480

Query: 481 EEAIFLLREMSKKGCSPTVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSLL 540
           E+AIF  R M  K CSP V+SYNTLINGLCKA+RFSDAY+F++EMLE+G KPD+ITYSLL
Sbjct: 481 EDAIFFFRGMRTKFCSPNVISYNTLINGLCKAKRFSDAYVFVREMLEEGWKPDVITYSLL 540

Query: 541 IDGLCRGDKLDMALNLWHQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVNC 600
           +DGLC+  K+DMALNLWHQ +DKG +PDVT+HNIIIHGLC+A K + AL+ + +M + NC
Sbjct: 541 MDGLCQDRKIDMALNLWHQALDKGSEPDVTMHNIIIHGLCSAGKAEDALQLYFQMGRWNC 600

Query: 601 VPDLVTHNTIMEGLYKVGDCVEALKIWDRILEEGLQPDILSYNITFKGLCSCARVSDAIG 660
           VP+LVT+NT+MEG YK+ DC +A +IW RI ++GLQPDI+SYN+T KG CSC+R+SDAI 
Sbjct: 601 VPNLVTYNTLMEGFYKIRDCEKASEIWARIFKDGLQPDIISYNVTLKGFCSCSRISDAIR 660

Query: 661 FLYDALKHGVLPTAPTWDILVRAVVDD 688
           FL  AL  G+LPT+ TW ILVRAV+++
Sbjct: 661 FLEKALHLGILPTSITWYILVRAVLNN 687

[Close]
BLAST of Cp4.1LG19g02740 vs. TrEMBL
Match: W9RGR7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023602 PE=4 SV=1)

HSP 1 Score: 939.5 bits (2427), Expect = 2.4e-270
Identity = 450/688 (65.41%), Postives = 553/688 (80.38%), Query Frame = 1 

Query: 1   MVELPKVLSPRLVLKLLKAEKNPNSALALFDSASQHPGYAHSPFVFQHILRRLIDPKLVV 60
           MVE  K LSP+ +L LLKAEKN + ALALF SAS+ PGYAHSP VF H+LRRLIDP LV 
Sbjct: 1   MVEFRKSLSPKQLLNLLKAEKNTHKALALFYSASRQPGYAHSPTVFHHVLRRLIDPNLVS 60

Query: 61  HVGRIVELIQAQRCICSEDVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSM 120
           HV R+VELI+ Q+C C EDVAL  IKAY K SMPD AL +F+RM +IFGCKP +RSYNS+
Sbjct: 61  HVNRVVELIRTQKCECPEDVALAVIKAYGKNSMPDQALDVFRRMDEIFGCKPEVRSYNSL 120

Query: 121 LNAFIESNQWSRAELFFTYFQ-TVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKG 180
           LNAF+E+N+W +AE FF YF  + G+SPNLQ+YN+LIK+ CKK++FEKAK+LL+W+  +G
Sbjct: 121 LNAFVEANRWDKAEQFFAYFSGSRGVSPNLQSYNVLIKVLCKKRRFEKAKKLLDWMWSEG 180

Query: 181 LSPNVFSYGTLINALAKSGNLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKAS 240
           L PN+ SYGTLIN L K+G L +AL +FDEM ERGV PDVMCYNILIDGF RKGD  KA 
Sbjct: 181 LKPNLVSYGTLINELVKNGKLWNALEVFDEMLERGVTPDVMCYNILIDGFLRKGDLEKAK 240

Query: 241 EVWERLLRESSVYPSVATYNIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHG 300
           ++WERLL  S VYP+  TYN+MINGLCK GKF+E  E+WNRMKKN+R  DLFTY S+IHG
Sbjct: 241 QIWERLLEGSEVYPNAVTYNVMINGLCKCGKFNEGFEMWNRMKKNEREPDLFTYSSLIHG 300

Query: 301 LSKAGNFDAAERVFQEMVDVGLSPDVTTYNTMLSALFQAGKLSKCFELWELMSKNNCCNI 360
           L +A N DAAE+V++EMV+ G+SPDV TYN ML+   +AG + + FE+WE M ++ C N+
Sbjct: 301 LCEAKNVDAAEQVYREMVESGVSPDVVTYNAMLNGFCRAGWIREFFEVWEAMGRSGCRNV 360

Query: 361 VSYNIFIQGLFGNKKVEEAICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKE 420
           VSYNI ++GL  N+KV+EAI  W+    +G   D TTYG+LIHGLCKNGYL+KAL IL+E
Sbjct: 361 VSYNILLKGLLENQKVDEAISFWEDFLGKGHIPDCTTYGVLIHGLCKNGYLDKALFILQE 420

Query: 421 AENEGADLDIFAYSSMIDGLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASK 480
           A+++GADLDIFAYSSMI+GLCK  RLD+A  ++ QM  H HKLNS+V NS+I+G++RASK
Sbjct: 421 AKSKGADLDIFAYSSMINGLCKGGRLDEASRVIDQMGKHGHKLNSHVCNSMIDGFIRASK 480

Query: 481 LEEAIFLLREMSKKGCSPTVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSL 540
           LE  I    EM  KGCSPTVVSYNTLI+GLCKAERFSDAYLF KEMLEKG KPDMITYSL
Sbjct: 481 LESGIHFFGEMRNKGCSPTVVSYNTLIHGLCKAERFSDAYLFAKEMLEKGWKPDMITYSL 540

Query: 541 LIDGLCRGDKLDMALNLWHQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVN 600
           LI+GL +G +++MALNLW Q +DKGLKPDVT+HNI+IH LC A KV+ AL+ + EM Q+N
Sbjct: 541 LINGLSQGKEINMALNLWKQALDKGLKPDVTMHNIVIHKLCCAGKVEDALQLYFEMRQLN 600

Query: 601 CVPDLVTHNTIMEGLYKVGDCVEALKIWDRILEEGLQPDILSYNITFKGLCSCARVSDAI 660
           CV +LVTHNT+MEG +K  DC +A  +W RIL+ GLQPDI+SYNIT KGLCSC R++DA+
Sbjct: 601 CVSNLVTHNTLMEGFFKARDCNKASHMWARILKCGLQPDIISYNITLKGLCSCNRLADAM 660

Query: 661 GFLYDALKHGVLPTAPTWDILVRAVVDD 688
            F+ DAL HG+LPT  TW ILVRAV+++
Sbjct: 661 RFVNDALDHGILPTVITWSILVRAVINN 688

[Close]
BLAST of Cp4.1LG19g02740 vs. TrEMBL
Match: B9IG54_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0016s11910g PE=4 SV=2)

HSP 1 Score: 936.0 bits (2418), Expect = 2.6e-269
Identity = 449/690 (65.07%), Postives = 552/690 (80.00%), Query Frame = 1 

Query: 1   MVELPKVLSPRLVLKLLKAEKNPNSALALFDSASQHPGYAHSPFVFQHILRRLIDPKLVV 60
           MVELPK LS R + KLLKAEK+P SALALFDSAS+ PGY HSP +F  ILRRL DPKLVV
Sbjct: 1   MVELPKPLSARQLFKLLKAEKSPKSALALFDSASRQPGYTHSPHIFLLILRRLSDPKLVV 60

Query: 61  HVGRIVELIQAQRCICSEDVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSM 120
           HV RIVELI+ Q+C C+EDV LT +KAY K  MP++AL  FQ+M +IFGCKPGIRSYN++
Sbjct: 61  HVTRIVELIKTQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNAL 120

Query: 121 LNAFIESNQWSRAELFFTYFQTVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKGL 180
           LNAFIE+N   +AE F  YF+TVG+ PNLQTYNILIKIS KK+QF +AK LL+W+  K L
Sbjct: 121 LNAFIEANLLDKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDL 180

Query: 181 SPNVFSYGTLINALAKSGNLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKASE 240
            P+V+SYGT+IN + KSG+L  AL +FDEM ERG+ PDVMCYNI+IDGFF++GD+V+  E
Sbjct: 181 KPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKE 240

Query: 241 VWERLLRESSVYPSVATYNIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHGL 300
           +WERL++ S VYP+V TYN+MINGLCK+G+FDES+E+W RMKKN+  +DLFTY S+I GL
Sbjct: 241 IWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGL 300

Query: 301 SKAGNFDAAERVFQEMVDVGLSPDVTTYNTMLSALFQAGKLSKCFELWELMSKNNCCNIV 360
              GN D A  V++EMV   +  DV TYN +L+   +AGK+ + FELW +M K NC N+V
Sbjct: 301 CDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVV 360

Query: 361 SYNIFIQGLFGNKKVEEAICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKEA 420
           SYNIFI+GLF N+KVEEAI  W+LL  RG  ADSTTYG+LIHGLCKNG+LNKAL+ILKEA
Sbjct: 361 SYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEA 420

Query: 421 ENEGADLDIFAYSSMIDGLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASKL 480
           ++ G  LD FAYSS++DGL K+ R+D+A+ +VHQM+ +  +L+ +V N LING+VRASKL
Sbjct: 421 KDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKL 480

Query: 481 EEAIFLLREMSKKGCSPTVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSLL 540
           EEAI   REM  KGCSPTVVSYNTLINGLCKAERFSDAY F+KEMLEK  KPDMITYSLL
Sbjct: 481 EEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLL 540

Query: 541 IDGLCRGDKLDMALNLWHQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVNC 600
           +DGLC+G K+DMALNLW Q + KGL+PDVT+HNI++HGLC+A K++ AL  ++ M Q NC
Sbjct: 541 MDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNC 600

Query: 601 VPDLVTHNTIMEGLYKVGDCVEALKIWDRILEEGLQPDILSYNITFKGLCSCARVSDAIG 660
           +P+LVTHNT+M+GLYK  +C  A  IW  + + G QPDI+SYNIT KGLCSC R+SD I 
Sbjct: 601 LPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIA 660

Query: 661 FLYDALKHGVLPTAPTWDILVRAVVDDRPL 691
              DALKHG+LPT+ TW ILVRAV+   PL
Sbjct: 661 LFDDALKHGILPTSITWYILVRAVLKLGPL 690

[Close]
BLAST of Cp4.1LG19g02740 vs. TrEMBL
Match: A5C4L7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034996 PE=4 SV=1)

HSP 1 Score: 922.5 bits (2383), Expect = 3.0e-265
Identity = 443/699 (63.38%), Postives = 542/699 (77.54%), Query Frame = 1 

Query: 1   MVELPKVLSPRLVLKLLKAEKNPNSALALFDSASQHPGYAHSPFVFQHILRRLIDPKLVV 60
           M   PK LSP+ V+KLLK+EKNP+SAL++FDS ++ PGY+H+P+VF HIL+RL DPKLV 
Sbjct: 1   MASAPKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVA 60

Query: 61  HVGRIVELIQAQRCICSEDVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSM 120
           H                         AY K SMPD AL +FQRM +IFGC+PGIRSYNS+
Sbjct: 61  H-------------------------AYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSL 120

Query: 121 LNAFIESNQWSRAELFFTYFQTVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKGL 180
           LNA IESN+W  AE FF YF+T+G+SPNLQTYNILIKISC+KKQF+KAK LLNW+  +G 
Sbjct: 121 LNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGF 180

Query: 181 SPNVFSYGTLINALAKSGNLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKASE 240
           SP+VFSYGTLIN+LAK+G +SDAL LFDEM ERGV PDV CYNILIDGFF+KGD + ASE
Sbjct: 181 SPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASE 240

Query: 241 VWERLLRESSVYPSVATYNIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHGL 300
           +WERLL+  SVYP++ +YN+MINGLCK GKFDES EIW+RMKKN+R  DL+TY ++IHGL
Sbjct: 241 IWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGL 300

Query: 301 SKAGNFDAAERVFQEMVDVGLSPDVTTYNTMLSALFQAGKLSKCFELWELMSKNNCCNIV 360
             +GN D A RV++EM + G+SPDV  YNTML+   +AG++ +C ELW++M K  C  +V
Sbjct: 301 CGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVV 360

Query: 361 SYNIFIQGLFGNKKVEEAICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKEA 420
           SYNI I+GLF N KV+EAI  W+LL E+   ADS TYG+L+HGLCKNGYLNKAL IL+EA
Sbjct: 361 SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEA 420

Query: 421 ENEGADLDIFAYSSMIDGLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASKL 480
           EN   DLD FAYSSMI+GLC+E RLD+   ++ QM  H  K N YV N++ING+VRASKL
Sbjct: 421 ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKL 480

Query: 481 EEAIFLLREMSKKGCSPTVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSLL 540
           E+A+     M  KGC PTVV+YNTLINGL KAERFS+AY  +KEML+KG KP+MITYSLL
Sbjct: 481 EDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLL 540

Query: 541 IDGLCRGDKLDMALNLWHQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVNC 600
           ++GLC+G KLDMALNLW Q ++KG KPDV +HNIIIHGLC++ KV+ AL+ ++EM Q NC
Sbjct: 541 MNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNC 600

Query: 601 VPDLVTHNTIMEGLYKVGDCVEALKIWDRILEEGLQPDILSYNITFKGLCSCARVSDAIG 660
           VP+LVTHNT+MEG YKV D   A KIWD IL+ GLQPDI+SYNIT KGLCSC R+SDA+G
Sbjct: 601 VPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVG 660

Query: 661 FLYDALKHGVLPTAPTWDILVRAVVDDRPLMEYALVSES 700
           FL DA+  GVLPTA TW+ILV+  +  +  ME   V  S
Sbjct: 661 FLNDAVDRGVLPTAITWNILVQGYLALKGYMEPVFVPAS 674

[Close]
BLAST of Cp4.1LG19g02740 vs. TAIR10
Match: AT3G09060.1 (AT3G09060.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 834.7 bits (2155), Expect = 4.1e-242
Identity = 399/686 (58.16%), Postives = 509/686 (74.20%), Query Frame = 1 

Query: 1   MVELPKVLSPRLVLKLLKAEKNPNSALALFDSASQHPGYAHSPFVFQHILRRLIDPKLVV 60
           MV  PK LSP+ VLKLLK+EKNP +A ALFDSA++HPGYAHS  V+ HILRRL + ++V 
Sbjct: 1   MVVFPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVN 60

Query: 61  HVGRIVELIQAQRCICSEDVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSM 120
           HV RIVELI++Q C C EDVAL+ IK Y K SMPD AL +F+RM +IFGC+P IRSYN++
Sbjct: 61  HVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTL 120

Query: 121 LNAFIESNQWSRAELFFTYFQTVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKGL 180
           LNAF+E+ QW + E  F YF+T G++PNLQTYN+LIK+SCKKK+FEKA+  L+W+ ++G 
Sbjct: 121 LNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGF 180

Query: 181 SPNVFSYGTLINALAKSGNLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKASE 240
            P+VFSY T+IN LAK+G L DAL LFDEMSERGV PDV CYNILIDGF ++ D   A E
Sbjct: 181 KPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAME 240

Query: 241 VWERLLRESSVYPSVATYNIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHGL 300
           +W+RLL +SSVYP+V T+NIMI+GL K G+ D+ ++IW RMK+N+R  DL+TY S+IHGL
Sbjct: 241 LWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGL 300

Query: 301 SKAGNFDAAERVFQEMVDVGLSPDVTTYNTMLSALFQAGKLSKCFELWELMSKNNCCNIV 360
             AGN D AE VF E+ +   S DV TYNTML    + GK+ +  ELW +M   N  NIV
Sbjct: 301 CDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV 360

Query: 361 SYNIFIQGLFGNKKVEEAICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKEA 420
           SYNI I+GL  N K++EA   W+L+  +G+ AD TTYG+ IHGLC NGY+NKAL +++E 
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420

Query: 421 ENEGADLDIFAYSSMIDGLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASKL 480
           E+ G  LD++AY+S+ID LCK+ RL++A  LV +M+ H  +LNS+V N+LI G +R S+L
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480

Query: 481 EEAIFLLREMSKKGCSPTVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSLL 540
            EA F LREM K GC PTVVSYN LI GLCKA +F +A  F+KEMLE G KPD+ TYS+L
Sbjct: 481 GEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540

Query: 541 IDGLCRGDKLDMALNLWHQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVNC 600
           + GLCR  K+D+AL LWHQ +  GL+ DV +HNI+IHGLC+  K+D A+     M   NC
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600

Query: 601 VPDLVTHNTIMEGLYKVGDCVEALKIWDRILEEGLQPDILSYNITFKGLCSCARVSDAIG 660
             +LVT+NT+MEG +KVGD   A  IW  + + GLQPDI+SYN   KGLC C  VS A+ 
Sbjct: 601 TANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAME 660

Query: 661 FLYDALKHGVLPTAPTWDILVRAVVD 687
           F  DA  HG+ PT  TW+ILVRAVV+
Sbjct: 661 FFDDARNHGIFPTVYTWNILVRAVVN 686

[Close]
BLAST of Cp4.1LG19g02740 vs. TAIR10
Match: AT3G53700.1 (AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 337.8 bits (865), Expect = 1.6e-92
Identity = 190/640 (29.69%), Postives = 331/640 (51.72%), Query Frame = 1 

Query: 13  VLKLLKAEKNPNSALALFDSASQHPGYAHSPFVFQHILRRLIDPKLVVHVGRIVELIQAQ 72
           +L  L+++ + ++AL LF+ AS+ P ++  P +++ IL RL        + +I+E +++ 
Sbjct: 53  LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112

Query: 73  RCICSEDVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSMLNAFIESNQWSR 132
           RC       L  I++Y +  + D+ L +   M+D FG KP    YN MLN  ++ N    
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKL 172

Query: 133 AELFFTYFQTVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKGLSPNVFSYGTLIN 192
            E+        G+ P++ T+N+LIK  C+  Q   A  +L  +   GL P+  ++ T++ 
Sbjct: 173 VEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQ 232

Query: 193 ALAKSGNLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKASEVWERLLRESSVY 252
              + G+L  AL + ++M E G +   +  N+++ GF ++G    A    + +  +   +
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292

Query: 253 PSVATYNIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHGLSKAGNFDAAERV 312
           P   T+N ++NGLCK G    ++EI + M +     D++TY S+I GL K G    A  V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352

Query: 313 FQEMVDVGLSPDVTTYNTMLSALFQAGKLSKCFELWE-LMSKNNCCNIVSYNIFIQGLFG 372
             +M+    SP+  TYNT++S L +  ++ +  EL   L SK    ++ ++N  IQGL  
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412

Query: 373 NKKVEEAICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKEAENEGADLDIFA 432
            +    A+  ++ +  +G   D  TY +LI  LC  G L++AL +LK+ E  G    +  
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472

Query: 433 YSSMIDGLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASKLEEAIFLLREMS 492
           Y+++IDG CK  +  +A E+  +M  H    NS  +N+LI+G  ++ ++E+A  L+ +M 
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532

Query: 493 KKGCSPTVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSLLIDGLCRGDKLD 552
            +G  P   +YN+L+   C+      A   ++ M   G +PD++TY  LI GLC+  +++
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592

Query: 553 MALNLWHQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVN-CVPDLVTHNTI 612
           +A  L      KG+      +N +I GL   RK   A+  F EM + N   PD V++  +
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652

Query: 613 MEGLYKVGDCV-EALKIWDRILEEGLQPDILSYNITFKGL 650
             GL   G  + EA+     +LE+G  P+  S  +  +GL
Sbjct: 653 FRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692

[Close]
BLAST of Cp4.1LG19g02740 vs. TAIR10
Match: AT1G74580.1 (AT1G74580.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 311.2 bits (796), Expect = 1.6e-84
Identity = 186/685 (27.15%), Postives = 349/685 (50.95%), Query Frame = 1 

Query: 8   LSPRLVLKLLKAEKNPNSALALFDSASQHPGYAHSPFVFQHILRRL-IDPKLVVHVGRIV 67
           L P+ V  ++K +K+P  AL +F+S  +  G+ H+   ++ ++ +L    K       +V
Sbjct: 5   LLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLV 64

Query: 68  ELIQAQRCICSEDVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSMLNAFIE 127
           ++ +       E V + A+K Y +     +A+++F+RM D + C+P + SYN++++  ++
Sbjct: 65  DMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVLVD 124

Query: 128 SNQWSRAELFFTYFQTVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKGLSPNVFS 187
           S  + +A   +   +  G++P++ ++ I +K  CK  +   A RLLN +S +G   NV +
Sbjct: 125 SGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVA 184

Query: 188 YGTLINALAKSGNLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKASEVWERLL 247
           Y T++    +    ++   LF +M   GV+  +  +N L+    +KGD  +  ++ ++++
Sbjct: 185 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 244

Query: 248 RESSVYPSVATYNIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHGLSKAGNF 307
           +   V P++ TYN+ I GLC+ G+ D ++ +   + +     D+ TY ++I+GL K   F
Sbjct: 245 KRG-VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKF 304

Query: 308 DAAERVFQEMVDVGLSPDVTTYNTMLSALFQAGKLSKCFEL-WELMSKNNCCNIVSYNIF 367
             AE    +MV+ GL PD  TYNT+++   + G +     +  + +      +  +Y   
Sbjct: 305 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 364

Query: 368 IQGLFGNKKVEEAICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKEAENEGA 427
           I GL    +   A+  +     +G   +   Y  LI GL   G + +A ++  E   +G 
Sbjct: 365 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 424

Query: 428 DLDIFAYSSMIDGLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASKLEEAIF 487
             ++  ++ +++GLCK   +  A  LV  M +  +  + + FN LI+GY    K+E A+ 
Sbjct: 425 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 484

Query: 488 LLREMSKKGCSPTVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSLLIDGLC 547
           +L  M   G  P V +YN+L+NGLCK  +F D     K M+EKG  P++ T+++L++ LC
Sbjct: 485 ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC 544

Query: 548 RGDKLDMALNLWHQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVNCVPDLV 607
           R  KLD AL L  +  +K + PD      +I G C    +D A   F +M +   V    
Sbjct: 545 RYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSST 604

Query: 608 -THNTIMEGLYKVGDCVEALKIWDRILEEGLQPDILSYNITFKGLCSCARVSDAIGFLYD 667
            T+N I+    +  +   A K++  +++  L PD  +Y +   G C    V+    FL +
Sbjct: 605 PTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLE 664

Query: 668 ALKHGVLPTAPTWDILVRAV-VDDR 689
            +++G +P+  T   ++  + V+DR
Sbjct: 665 MMENGFIPSLTTLGRVINCLCVEDR 687

[Close]
BLAST of Cp4.1LG19g02740 vs. TAIR10
Match: AT3G06920.1 (AT3G06920.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 309.3 bits (791), Expect = 6.1e-84
Identity = 183/653 (28.02%), Postives = 328/653 (50.23%), Query Frame = 1 

Query: 19  AEKNPNSALALFDSASQHPGYAHSPFVFQHILRRLIDPKLVVHVGRIVELIQAQRCICSE 78
           A  + +  L LF    Q  GY  +  +F  ++R       V     +++ +++       
Sbjct: 180 AVNHSDMMLTLFQQM-QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADI 239

Query: 79  DVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSMLNAFIESNQWSRAELFFT 138
            +    I ++ K    D A   F   ++  G KP   +Y SM+    ++N+   A   F 
Sbjct: 240 VLYNVCIDSFGKVGKVDMAWKFFHE-IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFE 299

Query: 139 YFQTVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKGLSPNVFSYGTLINALAKSG 198
           + +     P    YN +I       +F++A  LL     KG  P+V +Y  ++  L K G
Sbjct: 300 HLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMG 359

Query: 199 NLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKASEVWERLLRESSVYPSVATY 258
            + +AL +F+EM ++   P++  YNILID   R G    A E+ + + +++ ++P+V T 
Sbjct: 360 KVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSM-QKAGLFPNVRTV 419

Query: 259 NIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHGLSKAGNFDAAERVFQEMVD 318
           NIM++ LCK  K DE+  ++  M     + D  T+CS+I GL K G  D A +V+++M+D
Sbjct: 420 NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 479

Query: 319 VGLSPDVTTYNTMLSALFQAGKLSKCFELWELMSKNNCC-NIVSYNIFIQGLFGNKKVEE 378
                +   Y +++   F  G+     ++++ M   NC  ++   N ++  +F   + E+
Sbjct: 480 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEK 539

Query: 379 AICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKEAENEGADLDIFAYSSMID 438
               ++ +  R F  D+ +Y +LIHGL K G+ N+   +    + +G  LD  AY+ +ID
Sbjct: 540 GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVID 599

Query: 439 GLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASKLEEAIFLLREMSKKGCSP 498
           G CK  ++++A +L+ +M T   +     + S+I+G  +  +L+EA  L  E   K    
Sbjct: 600 GFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 659

Query: 499 TVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSLLIDGLCRGDKLDMALNLW 558
            VV Y++LI+G  K  R  +AYL L+E+++KGL P++ T++ L+D L + ++++ AL  +
Sbjct: 660 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCF 719

Query: 559 HQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVNCVPDLVTHNTIMEGLYKV 618
               +    P+   + I+I+GLC  RK + A  F+ EM +    P  +++ T++ GL K 
Sbjct: 720 QSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKA 779

Query: 619 GDCVEALKIWDRILEEGLQPDILSYNITFKGLCSCARVSDAIGFLYDALKHGV 671
           G+  EA  ++DR    G  PD   YN   +GL +  R  DA     +  + G+
Sbjct: 780 GNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828

[Close]
BLAST of Cp4.1LG19g02740 vs. TAIR10
Match: AT5G64320.1 (AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 308.9 bits (790), Expect = 7.9e-84
Identity = 179/644 (27.80%), Postives = 328/644 (50.93%), Query Frame = 1 

Query: 8   LSPRLVLKLLKAEKNPNSALALFDSASQHPGYAHSPFVFQHILRRLIDPKLVVHVGRIVE 67
           ++P  + KLL+   N ++++ LF       GY HS  V+Q ++ +L        + R++ 
Sbjct: 76  ITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLI 135

Query: 68  LIQAQRCICSEDVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSMLNAFIES 127
            ++ +  +  E + ++ ++ Y K   P     L   M +++ C+P  +SYN +L   +  
Sbjct: 136 QMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSG 195

Query: 128 NQWSRAELFFTYFQTVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKGLSPNVFSY 187
           N    A   F    +  + P L T+ +++K  C   + + A  LL  +++ G  PN   Y
Sbjct: 196 NCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIY 255

Query: 188 GTLINALAKSGNLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKASEVWERLLR 247
            TLI++L+K   +++AL L +EM   G  PD   +N +I G  +     +A+++  R+L 
Sbjct: 256 QTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI 315

Query: 248 ESSVYPSVATYNIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHGLSKAGNFD 307
                P   TY  ++NGLCK+G+ D + +++ R+ K     ++  + ++IHG    G  D
Sbjct: 316 RGFA-PDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP----EIVIFNTLIHGFVTHGRLD 375

Query: 308 AAERVFQEMV-DVGLSPDVTTYNTMLSALFQAGKLSKCFELWELMSKNNCC-NIVSYNIF 367
            A+ V  +MV   G+ PDV TYN+++   ++ G +    E+   M    C  N+ SY I 
Sbjct: 376 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL 435

Query: 368 IQGLFGNKKVEEAICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKEAENEGA 427
           + G     K++EA      +   G   ++  +  LI   CK   + +A+ I +E   +G 
Sbjct: 436 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 495

Query: 428 DLDIFAYSSMIDGLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASKLEEAIF 487
             D++ ++S+I GLC+   +  A+ L+  M +     N+  +N+LIN ++R  +++EA  
Sbjct: 496 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 555

Query: 488 LLREMSKKGCSPTVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSLLIDGLC 547
           L+ EM  +G     ++YN+LI GLC+A     A    ++ML  G  P  I+ ++LI+GLC
Sbjct: 556 LVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC 615

Query: 548 RGDKLDMALNLWHQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVNCVPDLV 607
           R   ++ A+    + + +G  PD+   N +I+GLC A +++  L  F ++      PD V
Sbjct: 616 RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 675

Query: 608 THNTIMEGLYKVGDCVEALKIWDRILEEGLQPDILSYNITFKGL 650
           T NT+M  L K G   +A  + D  +E+G  P+  +++I  + +
Sbjct: 676 TFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714

[Close]
BLAST of Cp4.1LG19g02740 vs. NCBI nr
Match: gi|449460383|ref|XP_004147925.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g09060 [Cucumis sativus])

HSP 1 Score: 1208.4 bits (3125), Expect = 0.0e+00
Identity = 579/701 (82.60%), Postives = 638/701 (91.01%), Query Frame = 1 

Query: 1   MVELPKVLSPRLVLKLLKAEKNPNSALALFDSASQHPGYAHSPFVFQHILRRLIDPKLVV 60
           MVELPKV+SP LVLKLLKAEKNPN+ALA+FDSA QHPGYAH PFVF HILRRL+DPKLVV
Sbjct: 1   MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVV 60

Query: 61  HVGRIVELIQAQRCICSEDVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSM 120
           HVGRIV+L++AQRC CSEDVAL+AIKAY KCSMPD AL+LFQ MVDIFGC PGIRS+NSM
Sbjct: 61  HVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM 120

Query: 121 LNAFIESNQWSRAELFFTYFQTVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKGL 180
           LNAFIESNQW  AELFFTYFQT GMSPNLQTYNILIKISCKK+QFEK K LL W+ E GL
Sbjct: 121 LNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGL 180

Query: 181 SPNVFSYGTLINALAKSGNLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKASE 240
           +P++ SYGTLINALAKSGNL DA+ LFDEMS RGVNPDVMCYNILIDGF RKGDFVKA+E
Sbjct: 181 NPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANE 240

Query: 241 VWERLLRESSVYPSVATYNIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHGL 300
           +W+RLL ESSVYPSV TYNIMINGLCKLGK DESME+WNRMKKN++S DLFT+ SMIHGL
Sbjct: 241 IWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGL 300

Query: 301 SKAGNFDAAERVFQEMVDVGLSPDVTTYNTMLSALFQAGKLSKCFELWELMSKNNCCNIV 360
           SKAGNF+AAE+VFQEM++ GLSPDV TYN MLS LF+ GKL+KCFELW +MSKNNCCNIV
Sbjct: 301 SKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIV 360

Query: 361 SYNIFIQGLFGNKKVEEAICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKEA 420
           SYN+ IQGL  NKKVE+AIC WQLLHERG  ADSTTYGLLI+GLCKNGYLNKALRIL+EA
Sbjct: 361 SYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEA 420

Query: 421 ENEGADLDIFAYSSMIDGLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASKL 480
           ENEGADLD FAYSSM+ GLCK+  L+QAVEL+HQM  ++ KLNS+VFNSLINGYVRA KL
Sbjct: 421 ENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKL 480

Query: 481 EEAIFLLREMSKKGCSPTVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSLL 540
           EEAI +LREM  K C+PTVVSYNT+INGLCKAERFSDAYL LKEMLE+GLKPDMITYSLL
Sbjct: 481 EEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLL 540

Query: 541 IDGLCRGDKLDMALNLWHQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVNC 600
           IDGLCRG+K+DMALNLWHQCI+K LKPD+ +HNIIIHGLCTA+KVDVAL+ FT+M QVNC
Sbjct: 541 IDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNC 600

Query: 601 VPDLVTHNTIMEGLYKVGDCVEALKIWDRILEEGLQPDILSYNITFKGLCSCARVSDAIG 660
           VPDLVTHNTIMEGLYK GDCVEALKIWDRILE GLQPDI+SYNITFKGLCSCARVSDAI 
Sbjct: 601 VPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIE 660

Query: 661 FLYDALKHGVLPTAPTWDILVRAVVDDRPLMEYALVSESRT 702
           FLYDAL  G+LP APTW++LVRAVVDD+PLMEYAL +ESRT
Sbjct: 661 FLYDALDRGILPNAPTWNVLVRAVVDDKPLMEYALNTESRT 701

[Close]
BLAST of Cp4.1LG19g02740 vs. NCBI nr
Match: gi|659069309|ref|XP_008449171.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g09060 [Cucumis melo])

HSP 1 Score: 1189.1 bits (3075), Expect = 0.0e+00
Identity = 571/692 (82.51%), Postives = 632/692 (91.33%), Query Frame = 1 

Query: 1   MVELPKVLSPRLVLKLLKAEKNPNSALALFDSASQHPGYAHSPFVFQHILRRLIDPKLVV 60
           MVELPKVLSP LVLKLLKAEKNPN+ALA+FDSA +HPGYAHSPFVF +ILRRLIDPKLVV
Sbjct: 1   MVELPKVLSPALVLKLLKAEKNPNAALAIFDSACRHPGYAHSPFVFHYILRRLIDPKLVV 60

Query: 61  HVGRIVELIQAQRCICSEDVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSM 120
           HVGRIV+L++AQRC CSEDVALTAIKAY KCSMPD AL+LFQ MVDIFGC+PGIRS+NSM
Sbjct: 61  HVGRIVDLMRAQRCTCSEDVALTAIKAYAKCSMPDQALNLFQNMVDIFGCEPGIRSFNSM 120

Query: 121 LNAFIESNQWSRAELFFTYFQTVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKGL 180
           LNAF+ESNQW RAELFFTYF+TVGMSPNLQTYNILIKISCKK+QFEKAK LL W+ E GL
Sbjct: 121 LNAFVESNQWRRAELFFTYFRTVGMSPNLQTYNILIKISCKKRQFEKAKGLLTWMFENGL 180

Query: 181 SPNVFSYGTLINALAKSGNLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKASE 240
            P+V SYGTLINALAKSGN+ DA+ LFDEMSERGVNPDVMCYNILIDGFFRKGDF+KA+E
Sbjct: 181 DPDVLSYGTLINALAKSGNILDAVELFDEMSERGVNPDVMCYNILIDGFFRKGDFLKANE 240

Query: 241 VWERLLRESSVYPSVATYNIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHGL 300
           +W+RLLRESSVYPSV TYNIMINGLCKLGKFDESME+WNRMKKN+RSLDLFT+ SMIHGL
Sbjct: 241 IWKRLLRESSVYPSVETYNIMINGLCKLGKFDESMEMWNRMKKNERSLDLFTFSSMIHGL 300

Query: 301 SKAGNFDAAERVFQEMVDVGLSPDVTTYNTMLSALFQAGKLSKCFELWELMSKNNCCNIV 360
           +KAGNFDA+E+VFQEM++ GLSPDV TYN MLS LF+AGKLSKCFELW++MSKNNCCNIV
Sbjct: 301 NKAGNFDASEKVFQEMIESGLSPDVRTYNAMLSGLFRAGKLSKCFELWDVMSKNNCCNIV 360

Query: 361 SYNIFIQGLFGNKKVEEAICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKEA 420
           SYNI IQGL  NKKVE+AIC WQ LHERG  ADSTTYGLLI+GLCKNGYLNKALRIL+EA
Sbjct: 361 SYNILIQGLLDNKKVEQAICYWQFLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEA 420

Query: 421 ENEGADLDIFAYSSMIDGLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASKL 480
           ENEGADLD +AYSSMI GLCK+ RL+QAVEL+HQMN +K KLNS+VFNSLINGYVRA KL
Sbjct: 421 ENEGADLDTYAYSSMIHGLCKKGRLEQAVELIHQMNKNKRKLNSHVFNSLINGYVRAFKL 480

Query: 481 EEAIFLLREMSKKGCSPTVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSLL 540
           EEAI +LREM  K C+PTVVSYNT+INGLCKAERFSDA L L+EMLE+GLKPD+ITYSLL
Sbjct: 481 EEAISVLREMKNKDCAPTVVSYNTIINGLCKAERFSDANLSLQEMLEEGLKPDIITYSLL 540

Query: 541 IDGLCRGDKLDMALNLWHQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVNC 600
           IDGLCRG+K+DMALNLW+QCI+K LKPDV +HNIIIHGLCTA+KVDVAL+ FT M QVNC
Sbjct: 541 IDGLCRGEKVDMALNLWNQCINKRLKPDVKMHNIIIHGLCTAQKVDVALEIFTRMGQVNC 600

Query: 601 VPDLVTHNTIMEGLYKVGDCVEALKIWDRILEEGLQPDILSYNITFKGLCSCARVSDAIG 660
           VPDLVTHNTIMEGLYK GDC EALKIWD ILE GLQPDI+SYNITFKGLCSCARVSDAI 
Sbjct: 601 VPDLVTHNTIMEGLYKAGDCAEALKIWDSILEAGLQPDIISYNITFKGLCSCARVSDAIE 660

Query: 661 FLYDALKHGVLPTAPTWDILVRAVVDDRPLME 693
           FLYDAL  G+LP APTW+IL+  V+  + L +
Sbjct: 661 FLYDALDRGILPNAPTWNILILVVLARKLLFD 692

[Close]
BLAST of Cp4.1LG19g02740 vs. NCBI nr
Match: gi|595822872|ref|XP_007204966.1| (hypothetical protein PRUPE_ppa002297mg [Prunus persica])

HSP 1 Score: 999.2 bits (2582), Expect = 3.6e-288
Identity = 481/687 (70.01%), Postives = 572/687 (83.26%), Query Frame = 1 

Query: 1   MVELPKVLSPRLVLKLLKAEKNPNSALALFDSASQHPGYAHSPFVFQHILRRLIDPKLVV 60
           MV+ PK LSP+ VLKLL+AEKNP+SALAL DSAS+HP Y HSP VF HILRRL+DPKLV 
Sbjct: 1   MVDFPKSLSPKRVLKLLQAEKNPHSALALLDSASRHPNYNHSPDVFHHILRRLLDPKLVA 60

Query: 61  HVGRIVELIQAQRCICSEDVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSM 120
           HV R+VELI+ Q+C C EDVALT IKAY K SMPD AL +FQ+M +IFGC PGIRSYNS+
Sbjct: 61  HVDRVVELIRTQKCKCPEDVALTVIKAYAKNSMPDKALAVFQQMEEIFGCAPGIRSYNSL 120

Query: 121 LNAFIESNQWSRAELFFTYFQTVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKGL 180
           LNAFIESNQW RAE FF YF+TVG+SPNLQTYNILIKISCKKKQFEKAK LL+W+ EKGL
Sbjct: 121 LNAFIESNQWERAEKFFAYFETVGLSPNLQTYNILIKISCKKKQFEKAKALLSWMWEKGL 180

Query: 181 SPNVFSYGTLINALAKSGNLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKASE 240
            P+VFSYGTLIN LAKSGNL DAL +FDEM ERGV+PDVMCYNILIDGFFRKGD V A+E
Sbjct: 181 KPDVFSYGTLINGLAKSGNLCDALEVFDEMVERGVSPDVMCYNILIDGFFRKGDSVNANE 240

Query: 241 VWERLLRESSVYPSVATYNIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHGL 300
           +W+RL+R+S VYP+V TYN+MI+GLCK GKFDE +EIWNRMKKN R  DLFT  S+I  L
Sbjct: 241 IWDRLVRDSEVYPNVVTYNVMIDGLCKCGKFDEGLEIWNRMKKNDRGPDLFTCSSLIQRL 300

Query: 301 SKAGNFDAAERVFQEMVDVGLSPDVTTYNTMLSALFQAGKLSKCFELWELMSKNNCCNIV 360
           S+AGN D AERV++EMV  GLSPDV  YN ML+    AGK+ +CFEL E+M K+ C N+V
Sbjct: 301 SEAGNVDGAERVYKEMVGKGLSPDVVVYNAMLNGFCLAGKVKECFELREVMEKHGCHNVV 360

Query: 361 SYNIFIQGLFGNKKVEEAICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKEA 420
           SYNIFI+GLF N KVEEAI  W+L+HE+G  ADSTTYG+LIHGLCKNGYLNKAL ILKE 
Sbjct: 361 SYNIFIRGLFENGKVEEAISVWELMHEKGCVADSTTYGVLIHGLCKNGYLNKALWILKEG 420

Query: 421 ENEGADLDIFAYSSMIDGLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASKL 480
           EN  ADLD FAYSSMI+ LCKE +LD+A  LV QM+   ++ NS+V N+LI G++RASKL
Sbjct: 421 ENTRADLDAFAYSSMINWLCKEGKLDEAARLVGQMDKCGYEPNSHVCNALIYGFIRASKL 480

Query: 481 EEAIFLLREMSKKGCSPTVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSLL 540
           E+AIF  R M  K CSP V+SYNTLINGLCKA+RFSDAY+F++EMLE+G KPD+ITYSLL
Sbjct: 481 EDAIFFFRGMRTKFCSPNVISYNTLINGLCKAKRFSDAYVFVREMLEEGWKPDVITYSLL 540

Query: 541 IDGLCRGDKLDMALNLWHQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVNC 600
           +DGLC+  K+DMALNLWHQ +DKG +PDVT+HNIIIHGLC+A K + AL+ + +M + NC
Sbjct: 541 MDGLCQDRKIDMALNLWHQALDKGSEPDVTMHNIIIHGLCSAGKAEDALQLYFQMGRWNC 600

Query: 601 VPDLVTHNTIMEGLYKVGDCVEALKIWDRILEEGLQPDILSYNITFKGLCSCARVSDAIG 660
           VP+LVT+NT+MEG YK+ DC +A +IW RI ++GLQPDI+SYN+T KG CSC+R+SDAI 
Sbjct: 601 VPNLVTYNTLMEGFYKIRDCEKASEIWARIFKDGLQPDIISYNVTLKGFCSCSRISDAIR 660

Query: 661 FLYDALKHGVLPTAPTWDILVRAVVDD 688
           FL  AL  G+LPT+ TW ILVRAV+++
Sbjct: 661 FLEKALHLGILPTSITWYILVRAVLNN 687

[Close]
BLAST of Cp4.1LG19g02740 vs. NCBI nr
Match: gi|645220855|ref|XP_008242164.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g09060 [Prunus mume])

HSP 1 Score: 996.1 bits (2574), Expect = 3.1e-287
Identity = 478/687 (69.58%), Postives = 572/687 (83.26%), Query Frame = 1 

Query: 1   MVELPKVLSPRLVLKLLKAEKNPNSALALFDSASQHPGYAHSPFVFQHILRRLIDPKLVV 60
           MV+ PK LSP+ VLKLL+AEKNP+SALAL DSAS HP Y+HSP VF HILRRLIDPKLV 
Sbjct: 1   MVDFPKSLSPKRVLKLLQAEKNPHSALALLDSASCHPNYSHSPDVFHHILRRLIDPKLVA 60

Query: 61  HVGRIVELIQAQRCICSEDVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSM 120
           HV R+VELI+ Q+C C EDVALT IKAY K SMPD AL +FQ+M +IFGC PGIRSYNS+
Sbjct: 61  HVDRVVELIRTQKCKCPEDVALTVIKAYAKNSMPDKALAVFQQMEEIFGCAPGIRSYNSL 120

Query: 121 LNAFIESNQWSRAELFFTYFQTVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKGL 180
           LNAFIESNQW RAE FF YF+TVG+SPNLQTYNILIKISCKKKQFEKAK LL+W+ EKGL
Sbjct: 121 LNAFIESNQWERAEKFFAYFETVGLSPNLQTYNILIKISCKKKQFEKAKALLSWMWEKGL 180

Query: 181 SPNVFSYGTLINALAKSGNLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKASE 240
            P+ FSYGTLIN LAKSGNL DAL +FDEM +RGV+PDVMCYNILIDGFFRKGD V A+E
Sbjct: 181 KPDAFSYGTLINGLAKSGNLCDALEVFDEMVDRGVSPDVMCYNILIDGFFRKGDSVNANE 240

Query: 241 VWERLLRESSVYPSVATYNIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHGL 300
           +W+RL+++S VYP+V TYN+MINGLCK GKF+ES++IWNRMKKN+R  DLFT  S+I GL
Sbjct: 241 IWDRLVKDSEVYPNVVTYNVMINGLCKCGKFNESLDIWNRMKKNERGPDLFTCSSLIQGL 300

Query: 301 SKAGNFDAAERVFQEMVDVGLSPDVTTYNTMLSALFQAGKLSKCFELWELMSKNNCCNIV 360
            +AGN D AERV++EMV  G+SPDV  YN ML+   +AGK+ +CFELWE+M K  C N+V
Sbjct: 301 CEAGNADGAERVYKEMVGKGVSPDVVVYNAMLNGFCRAGKVKECFELWEVMEKCGCHNVV 360

Query: 361 SYNIFIQGLFGNKKVEEAICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKEA 420
           SYNIFI+GLF N K EEAI  W+L+H +   ADSTTYG+LIHGLCKNGYLNKAL ILKEA
Sbjct: 361 SYNIFIRGLFENGKGEEAISVWELMHVKSCVADSTTYGVLIHGLCKNGYLNKALWILKEA 420

Query: 421 ENEGADLDIFAYSSMIDGLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASKL 480
           EN  ADLD FAYSSMI+ LCKE +LD+A  LV QM+   ++ NS+V N+LI G++RASKL
Sbjct: 421 ENTRADLDAFAYSSMINWLCKEGKLDEAARLVGQMDKCGYEPNSHVCNALIYGFIRASKL 480

Query: 481 EEAIFLLREMSKKGCSPTVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSLL 540
           E+AIF  R M  K CSP V+SYNTLINGLCKA+RFSDAY+F++EMLE+G KPDMITYSLL
Sbjct: 481 EDAIFFFRGMRTKFCSPNVISYNTLINGLCKAKRFSDAYVFVREMLEEGWKPDMITYSLL 540

Query: 541 IDGLCRGDKLDMALNLWHQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVNC 600
           +DGLC+  K+DMALNLWHQ +DKG +PDVT+HNIIIHGLC+A K + AL+ + +M + NC
Sbjct: 541 MDGLCQDRKIDMALNLWHQALDKGSEPDVTMHNIIIHGLCSAGKAEDALQLYFQMGRWNC 600

Query: 601 VPDLVTHNTIMEGLYKVGDCVEALKIWDRILEEGLQPDILSYNITFKGLCSCARVSDAIG 660
           VP+LVT+NT+MEG YK+ DC +A +IW RI ++GLQPDI+SYN+T KG CSC+R+SDAI 
Sbjct: 601 VPNLVTYNTLMEGFYKIRDCEKASEIWARIFKDGLQPDIISYNVTLKGFCSCSRLSDAIR 660

Query: 661 FLYDALKHGVLPTAPTWDILVRAVVDD 688
           FL  AL  G+LPT+ TW ILVRAV+++
Sbjct: 661 FLEKALHLGILPTSITWYILVRAVLNN 687

[Close]
BLAST of Cp4.1LG19g02740 vs. NCBI nr
Match: gi|694355831|ref|XP_009358847.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g09060 [Pyrus x bretschneideri])

HSP 1 Score: 995.3 bits (2572), Expect = 5.2e-287
Identity = 473/687 (68.85%), Postives = 570/687 (82.97%), Query Frame = 1 

Query: 1   MVELPKVLSPRLVLKLLKAEKNPNSALALFDSASQHPGYAHSPFVFQHILRRLIDPKLVV 60
           MV+ PK LSP+ VLKLLKAEKNP+SALAL DSA++HP Y HS  VF HILRRL+DPKLVV
Sbjct: 1   MVDFPKSLSPKRVLKLLKAEKNPHSALALLDSATRHPNYNHSSDVFHHILRRLVDPKLVV 60

Query: 61  HVGRIVELIQAQRCICSEDVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSM 120
           HV R+VELI+ Q+C C EDVALT IKAYTK SMPD AL +FQ+M +IFGC PG+RSYNS+
Sbjct: 61  HVERVVELIRTQKCKCPEDVALTVIKAYTKYSMPDKALAVFQQMEEIFGCAPGVRSYNSL 120

Query: 121 LNAFIESNQWSRAELFFTYFQTVGMSPNLQTYNILIKISCKKKQFEKAKRLLNWISEKGL 180
           LNAFIESNQW RAE FF YF+TVG+ PNLQTYN+LIKIS KKKQFEKAK LLNW+ EKGL
Sbjct: 121 LNAFIESNQWDRAEKFFAYFETVGLEPNLQTYNVLIKISGKKKQFEKAKGLLNWMWEKGL 180

Query: 181 SPNVFSYGTLINALAKSGNLSDALNLFDEMSERGVNPDVMCYNILIDGFFRKGDFVKASE 240
            P+VFSYGTLIN LAK GNLSDAL +FDEM ERGV PDVMCYNILIDGFFRKGD V A+E
Sbjct: 181 EPDVFSYGTLINGLAKGGNLSDALEVFDEMLERGVGPDVMCYNILIDGFFRKGDSVSANE 240

Query: 241 VWERLLRESSVYPSVATYNIMINGLCKLGKFDESMEIWNRMKKNKRSLDLFTYCSMIHGL 300
           +WERL++ES VYP++ TYN+MINGLCK GKF+ES+EIWNRMK N R  DL+T  S+IHGL
Sbjct: 241 IWERLVKESEVYPNIVTYNVMINGLCKCGKFNESLEIWNRMKTNDRGPDLYTCSSLIHGL 300

Query: 301 SKAGNFDAAERVFQEMVDVGLSPDVTTYNTMLSALFQAGKLSKCFELWELMSKNNCCNIV 360
            KAGN D AERV++EMVD G+ PDV  YN ML+   +AGK  +CFELW++M K  C N+V
Sbjct: 301 CKAGNVDGAERVYKEMVDKGVVPDVVVYNAMLNGFCRAGKTKECFELWDVMEKCGCRNVV 360

Query: 361 SYNIFIQGLFGNKKVEEAICNWQLLHERGFTADSTTYGLLIHGLCKNGYLNKALRILKEA 420
           SYN  I+GLF N+ V+EAI  W L+ ++   AD+TTYG+LIHGLCKNGYLNKAL+ILKEA
Sbjct: 361 SYNTLIRGLFENENVDEAISVWGLMRDKACVADATTYGVLIHGLCKNGYLNKALQILKEA 420

Query: 421 ENEGADLDIFAYSSMIDGLCKEARLDQAVELVHQMNTHKHKLNSYVFNSLINGYVRASKL 480
           EN GADLD FAYSSMI+GLCKE  LD+A  LV +M+   ++ NS+V N+LI GY++ASKL
Sbjct: 421 ENTGADLDAFAYSSMINGLCKEGILDEAARLVGKMDKCGYEPNSHVCNALIYGYIQASKL 480

Query: 481 EEAIFLLREMSKKGCSPTVVSYNTLINGLCKAERFSDAYLFLKEMLEKGLKPDMITYSLL 540
           E+AI   R M  K CSP V+SYNTLINGLCKAERFSDAY+F++EMLEKG KPD+ITYSLL
Sbjct: 481 EDAILFFRGMCTKFCSPNVISYNTLINGLCKAERFSDAYVFVREMLEKGWKPDVITYSLL 540

Query: 541 IDGLCRGDKLDMALNLWHQCIDKGLKPDVTIHNIIIHGLCTARKVDVALKFFTEMAQVNC 600
           +DGLC+G K+DMALN+WHQ +DKG +PDVT+HNIIIHGLC+A K + AL+ + +M + NC
Sbjct: 541 MDGLCQGKKIDMALNVWHQALDKGFEPDVTMHNIIIHGLCSAGKAEDALQLYFQMGRWNC 600

Query: 601 VPDLVTHNTIMEGLYKVGDCVEALKIWDRILEEGLQPDILSYNITFKGLCSCARVSDAIG 660
           VP+LVT+NT+MEG YK+ DC +A +IW R+L++GLQPDI++YN+T KG CSC+R+SDAI 
Sbjct: 601 VPNLVTYNTLMEGFYKITDCEKASEIWARLLKDGLQPDIITYNVTLKGFCSCSRISDAIR 660

Query: 661 FLYDALKHGVLPTAPTWDILVRAVVDD 688
           FL  AL  G+LPT+ TW ILVRAV+++
Sbjct: 661 FLEKALHLGILPTSITWYILVRAVLNN 687

The following BLAST results are available for this feature:
BLAST of Cp4.1LG19g02740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP221_ARATH7.4e-24158.16Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana GN... [more]
PP281_ARATH2.8e-9129.69Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
PP120_ARATH2.8e-8327.15Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... [more]
PP217_ARATH1.1e-8228.02Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN... [more]
PP444_ARATH1.4e-8227.80Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
BLAST of Cp4.1LG19g02740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXH4_CUCSA0.0e+0082.60Uncharacterized protein OS=Cucumis sativus GN=Csa_4G308460 PE=4 SV=1[more]
M5WHA8_PRUPE2.5e-28870.01Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002297mg PE=4 SV=1[more]
W9RGR7_9ROSA2.4e-27065.41Uncharacterized protein OS=Morus notabilis GN=L484_023602 PE=4 SV=1[more]
B9IG54_POPTR2.6e-26965.07Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP... [more]
A5C4L7_VITVI3.0e-26563.38Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034996 PE=4 SV=1[more]
BLAST of Cp4.1LG19g02740 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G09060.14.1e-24258.16 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G53700.11.6e-9229.69 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G74580.11.6e-8427.15 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G06920.16.1e-8428.02 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G64320.17.9e-8427.80 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Cp4.1LG19g02740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449460383|ref|XP_004147925.1|0.0e+0082.60PREDICTED: pentatricopeptide repeat-containing protein At3g09060 [Cucumis sativu... [more]
gi|659069309|ref|XP_008449171.1|0.0e+0082.51PREDICTED: pentatricopeptide repeat-containing protein At3g09060 [Cucumis melo][more]
gi|595822872|ref|XP_007204966.1|3.6e-28870.01hypothetical protein PRUPE_ppa002297mg [Prunus persica][more]
gi|645220855|ref|XP_008242164.1|3.1e-28769.58PREDICTED: pentatricopeptide repeat-containing protein At3g09060 [Prunus mume][more]
gi|694355831|ref|XP_009358847.1|5.2e-28768.85PREDICTED: pentatricopeptide repeat-containing protein At3g09060 [Pyrus x bretsc... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:1901363 heterocyclic compound binding
molecular_function GO:0097159 organic cyclic compound binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g02740.1Cp4.1LG19g02740.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 85..106
score: 0.023coord: 466..495
score: 9.
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 424..455
score: 1.1E-8coord: 563..595
score: 7.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 253..302
score: 5.3E-15coord: 183..230
score: 8.6E-15coord: 358..406
score: 2.3E-10coord: 497..546
score: 1.0E-18coord: 323..356
score: 4.4E-8coord: 602..651
score: 1.8E-11coord: 112..161
score: 2.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 431..463
score: 7.0E-6coord: 151..184
score: 4.7E-5coord: 221..254
score: 9.0E-7coord: 360..393
score: 8.5E-4coord: 500..533
score: 1.3E-10coord: 257..289
score: 6.2E-10coord: 185..219
score: 6.2E-10coord: 396..424
score: 5.4E-5coord: 535..569
score: 6.1E-6coord: 291..325
score: 5.1E-11coord: 571..603
score: 1.9E-6coord: 605..639
score: 2.7E-6coord: 465..499
score: 1.9E-9coord: 327..357
score: 6.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 533..567
score: 11.772coord: 113..147
score: 8.901coord: 638..672
score: 9.131coord: 463..497
score: 13.241coord: 77..112
score: 7.169coord: 603..637
score: 11.213coord: 324..358
score: 10.797coord: 254..288
score: 12.419coord: 498..532
score: 13.351coord: 428..462
score: 10.896coord: 289..323
score: 13.636coord: 148..182
score: 11.29coord: 183..217
score: 13.625coord: 359..392
score: 5.886coord: 218..253
score: 10.227coord: 393..427
score: 10.83coord: 568..602
score: 10
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 186..349
score: 6.5E-13coord: 94..130
score: 6.5E-13coord: 393..632
score: 7.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..13
score: 1.7E-301coord: 83..644
score: 1.7E-301coord: 31..60
score: 1.7E
NoneNo IPR availablePANTHERPTHR24015:SF626SUBFAMILY NOT NAMEDcoord: 1..13
score: 1.7E-301coord: 31..60
score: 1.7E-301coord: 83..644
score: 1.7E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 230..453
score: 4.01

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG19g02740CmaCh07G010700Cucurbita maxima (Rimu)cmacpeB880
Cp4.1LG19g02740Csa4G308460Cucumber (Chinese Long) v2cpecuB495
Cp4.1LG19g02740MELO3C003226Melon (DHL92) v3.5.1cpemeB456
Cp4.1LG19g02740CSPI04G15660Wild cucumber (PI 183967)cpecpiB496
Cp4.1LG19g02740MELO3C003226.2Melon (DHL92) v3.6.1cpemedB539
Cp4.1LG19g02740CsaV3_4G026020Cucumber (Chinese Long) v3cpecucB0609
Cp4.1LG19g02740Carg19983Silver-seed gourdcarcpeB0789
Cp4.1LG19g02740Carg13295Silver-seed gourdcarcpeB0830
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG19g02740Cp4.1LG10g08110Cucurbita pepo (Zucchini)cpecpeB081
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG19g02740Watermelon (97103) v1cpewmB474
Cp4.1LG19g02740Watermelon (97103) v1cpewmB485
Cp4.1LG19g02740Melon (DHL92) v3.5.1cpemeB442
Cp4.1LG19g02740Cucumber (Gy14) v2cgybcpeB373
Cp4.1LG19g02740Cucumber (Gy14) v2cgybcpeB812
Cp4.1LG19g02740Melon (DHL92) v3.6.1cpemedB522
Cp4.1LG19g02740Melon (DHL92) v3.6.1cpemedB525
Cp4.1LG19g02740Silver-seed gourdcarcpeB0227
Cp4.1LG19g02740Silver-seed gourdcarcpeB1390
Cp4.1LG19g02740Cucumber (Chinese Long) v3cpecucB0594
Cp4.1LG19g02740Cucumber (Chinese Long) v3cpecucB0621
Cp4.1LG19g02740Wax gourdcpewgoB0608
Cp4.1LG19g02740Cucurbita pepo (Zucchini)cpecpeB416
Cp4.1LG19g02740Cucurbita pepo (Zucchini)cpecpeB429
Cp4.1LG19g02740Cucumber (Gy14) v1cgycpeB0486
Cp4.1LG19g02740Cucurbita maxima (Rimu)cmacpeB278
Cp4.1LG19g02740Cucurbita maxima (Rimu)cmacpeB668
Cp4.1LG19g02740Cucurbita maxima (Rimu)cmacpeB829
Cp4.1LG19g02740Cucurbita moschata (Rifu)cmocpeB240
Cp4.1LG19g02740Cucurbita moschata (Rifu)cmocpeB619
Cp4.1LG19g02740Cucurbita moschata (Rifu)cmocpeB782
Cp4.1LG19g02740Cucurbita moschata (Rifu)cmocpeB817
Cp4.1LG19g02740Bottle gourd (USVL1VR-Ls)cpelsiB397
Cp4.1LG19g02740Watermelon (Charleston Gray)cpewcgB422
Cp4.1LG19g02740Watermelon (Charleston Gray)cpewcgB432