Cp4.1LG19g01820 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG19g01820
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDNA replication complex GINS protein PSF2
LocationCp4.1LG19 : 1436190 .. 1440767 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGATGTGATTTTCGCACACTTTTTCGCAGCGAGCTTAAAAATTGGTTTACGTTCATTTCCCCCCTCAAATTTTGCCAAGATTTTCAGTTTTGAATTTTCTCCCAACTCTTGCCGCTGCTTCTGTTTCCCTAGTAATCGACTTCCGATCTTCACGAATTATTCAGATTGAAGCTTTCGTTAGGTAAATTTTCAGATTGCTTTTGTTTCTCTTCTCCATTTGAAACTCTACAGATCCTCTAATTTGTAACAACCATTGAAATTTATACGCTTTTCGCTGGAATTTTAGTTGCTCTTTACCGATTTACTTTTGCAGTTTGGTTCATTCGCTGTAGCTTGTTCGATTTGATGATTTTAACAGTTGCCACGTAGTTATTTGATTTATATTTGATATCACTTTCTATAATTCCGTTTATATTCTACAGATGAAACTGATACCATTATCGTTGAATGTGCTAGCACGAATTTTTATTCTGGTTTGAAGATGATAAATCAGATAATGTTTAGATTGGGCAGTGGATGGTTTTTCATAGCATGGTTTTGTAATTTCTGGAGGAGGAAAATCTTTGAACTTAGAAGTTAGACATCAAGCCTAGAGATCTAAGTGGAGGGTTTAGAAGCATGGGTTGATGAAAACTGTGTTTGGGATGCAGATTTTAGATGCTTTGGTCTTGTTAAACCCTTGAATTTGTGTCATAAACCATAGGCGTGAGAATACTCCTTGACTAAACTCAAACCCTCCCTCAAATACCCTCTAGAATTTGCTAGTGTGTAGCAAAATTTCTGCTCTTGGTTTTTCTGTACGGTGGGGGCGCTTTTAAGTTTCTGGGAAGTGTTTACTTTGAATTGCCAATCCAAAATTTGTGAGAACAACTTTTAACCTTGCTAGGATACGAACCAAGACATTTAAATCCTGCAATATGAACGTTAAGGAAGATGTGAAGAAAATGTTGTTAAATTACCACAAGATCTCTAGTCACATGGAGTGAAATCAAGTTGCAATTAGTGCTATATTAAAGAAGAATCCAGCTTTATTTTGCAACAATGGATTCAAGTGAGGTTTCATTTATTCTTAGATGGTTATGAATTCTTGGGTGGACGATTGAAATCTACTATTTTTGAATTTATGGTGTTTCATTAGTGTATTTTTTAGTTTTAAGACTTTTTATTTACTTTATAGTTATATTTACATAATGACTAATTATGGTACGAAGGTTGTAACTTTTGAAATGTCTCATAGAAGGTCAAGAATTTCATTTTGAGGCTATATAGAACCATGTATGTTGTCTTTGTAAAGGAAATTTGAAAAATGTATTAAAAAGATTATTTGTGCAGATAAGTTTTTGTTTAGGCTACATGCTTAGAATTATTTAATGAATTTTGTTTGTGGGGTGATTCGAATAACAAACATGTTTTCTTGCCTTAAGATATCTGATCAACAAAGTTCTCCAGATCTTATTTTCCCTTGGATGAATTCTTTATCGTTTTGGGATTCTTGGATATTTTAGATGTAAAGGTATTGTTCTTCAATAAGACTATTAGATGAAACTCCCAAGAGTTTCATATCATTTAGGATGAAATCATCTTGAATTAGAGTTTTTAACCGGTATGATCTAGGGGTTTGCATATCCATTATGGGTTCTTAGATCCAATTGGCTAGAGTTTTCATACCATGCTCTCTTTAGTTATCCGTATCAAGAATGAAACTGTTATTTTATATTTGAATAGTCTGATTTCCTTTTAACAGAAATGGCTGGTCAATCAGATCCTCACCTGACCCTATTTTCTGCAGAAGAGGTATCCTCTTCTTGCTCTGTCTAAATGGTTAAAGCAATGTTATCTGTCATTGATGCTAAATTGTTTCGGGGATTCTTGTCCAGATCGAGTTTGTAGCTGAAGATGAAATGGTGGAGATTGTTCCCAATATGAGAATGGATTCTCTAAATTTGATTTGTGTATGTTGTCTTCTTCACCTATTCTGTTCATGTTTAAAAGATGCTGTCTGCTTTATTGCAAGGATTCTTCAATTCTTCATTGTTGTGTGTTTTTTATCTTTTCTTCCTGCTAATGCTGAGTGTTTTTAATTTCCTTGTTTCCTCAAGGGGGATTATGGTCCATTCTATCCCCAAATCGCCACTGAAGTTCCATTGTGGCTAGCGATTGCTCTGAAAAAAAGAGGGAAATGTGCAATTAGGCCTCCAGAGTGGATGTCTGTTGGTAAGTTCTATCTGTTATATATGGTGAAATTTCTTTCATGCATAACACGCGTAATCTGCAGGCTTTTTCTTCGTTCTTTTTTGGTGAATGTCGACGGATACTCCTGGATTAAGTATCTTAATCTGATGCAATTACTAGTCTGCATACTCAATTGGAGGATATAATATCTGTAGATCTAGAATTTACGTCGGTTTTGTAGATTAATATCGAAGAGATCATTACATTCCAAGTATATAGGAATCAGTGCTGTTGAGCAATCCTCCTATCATGGACCATGGTTTCAAGCTTGAAACACAGGGTCACGCCAACATGAATGGGATATAATGCTTTCTTTATGCAATAGAAGAACTCCTAGCATCCTTGCAAACCATATATCAATTTAGTGGATGAATATCAAAAAATTATAGAGTGGTTCTATGTTTAATATTACGTTCTTCGGACCTACGTGAAGGATTCATCGTCAAGGAAACTCCATCTCCCAGAGAAAAACCAAATAAAGTTACAATTCTATGGTACAGCTGACCTTAGCTTGTTACTTTTTCTTTAGAGCTCGTAGTCTAAAAAATATCCAAAAGATATTGAGATATGGATTCCAAATTTTGACTAGGGATCTTATCCTGGTTTCATTACATTCGATGTCGATGATCTGTTTTTAGACGTCTGTCAATCATGAGAACACTTTTCGGTTATGCACTAAGAATCCTAAGATTATGATTTCTCAGACGGGAAAAAACTAGTTGTAGCTTCCTCAGACACAAAAGAGCTGAATCTTTATGGTGGCTTGGAGGGGAAATGTGTTGGTGTTAGCACACAACTACTTTCTTTCTTGCATGCATTTTTAATTGTATCAAATTTTAAGATATTGCTGCTGGTTTCATTGATATCTTGGTTAGGTACATGAGTAGCATGGATTACCCAATAGTACCTAAGAGTAACATTTTTCACAATTTATTTCTTGTAATCCAAATATTTTAGATTTCTTCCTTCTGATGGGTGCAATAGGCATGAACTCTTTAATTTTTTTCAATGTGATGAAGAGAATAGAAGAAATATTGGGCTATAAAAAGACTGAAAAAGAAGAGAGATATAATCCATTACAGTCAGGGTAGATAGTTTGTAATCTCACTGTTTTCGGCTTTCTGGACTAGAAAAGTTGACACAAACGTTGGAGGCAGAACGAGAGTCTCAAGGATCTTTCCAGATACTACCCTTCCATTACGTCGAAATATCGAAACTTCTTTTTGACCAGTAAGTATTACGAGATCTTTAACATAACGAATTTTCTTTATGGTCATTAAAAGTGTTGATGTTAACTGTATGTTGTGGATGATAGCGCACGAGACGACGTTCCTGACATGTATTTGGTGAGTTGGGAGCTTTTGTTTTGAGTTTCAGCATGTAATTAACTTCTTTTCATGAGTCATTTGATTGAGTTGCTTTTCATAGGTAAGGTCTCTTATTGAAGATATCAGGGATGTTCGGTTTCACAAAGTTGAAACCAGTTTGGAGTCGATTGATACACGCACATCCGCAGTGAAGGTCGACTTCTGACTAAGAGCTTATTTTTATTTTCTTCTTCTTTTCTTATATACTGACCAAATTTATGAACTTACAGCTTTATTAGTGTATTATTTGTAACAGAAAAGATACTAAATGCATCGTTCTTACCCACTAGGTTTTGTCTTTTTGATTATGTGCTGATGTGATCAGGGTCTTCTGGTTTTGTGATCCTAGATTAAAGATCTATCTGCCATGGAAGTGAATATAGTTCGACCGTTTGTCGGTAGAGCGTTGCAGGCAATTTACAAGCACGGAAATCCAGAGTTGGTCCCAGATCAAGAAAGAATGACCAATGTGCAGTCACAAGGACATGATCATGGGCAAAGGGTATGTGCCTCTTTTGCAACTCTATGCATCAACGATCCCTACTGATAATGTTGCTACCTACTGATGTAAGTATTTGCTCAATATGACGTTTCTAATGTTATGTCTATGTCTGTTTTCTCCAGAGACCTCTTCGGAGACGGTAGAATCCGCGTCAATTATGATAAGTACATTCTTATTTATATGAGCAGTTCTAAATGAAGCTAGCATAGATTCTTCTTCAAAACCAATTTATGTGTTCACTTATATTTCTTACTCTTAGCTAAACTCTCTCTAGATCATCCCTTTATTACTAGAACGTATGATGCTCATTGTAGATTTGTTAGCATAATAGGCTAACTGGATGTATATGGATCCATGTAGTGATGCTTGTTTACCTTAGATGAAAGGTCAATGATCCAAGTTGTTTTTAATTTAAATGTCTATTTATTTTATTTAGCCTAAAGAGGGGAGCGAGTTACAAATGGTATTAGAGCCAG

mRNA sequence

TGGATGTGATTTTCGCACACTTTTTCGCAGCGAGCTTAAAAATTGGTTTACGTTCATTTCCCCCCTCAAATTTTGCCAAGATTTTCAGTTTTGAATTTTCTCCCAACTCTTGCCGCTGCTTCTGTTTCCCTAGTAATCGACTTCCGATCTTCACGAATTATTCAGATTGAAGCTTTCGTTAGAAATGGCTGGTCAATCAGATCCTCACCTGACCCTATTTTCTGCAGAAGAGATCGAGTTTGTAGCTGAAGATGAAATGGTGGAGATTGTTCCCAATATGAGAATGGATTCTCTAAATTTGATTTGTGGGGATTATGGTCCATTCTATCCCCAAATCGCCACTGAAGTTCCATTGTGGCTAGCGATTGCTCTGAAAAAAAGAGGGAAATGTGCAATTAGGCCTCCAGAGTGGATGTCTGTTGAAAAGTTGACACAAACGTTGGAGGCAGAACGAGAGTCTCAAGGATCTTTCCAGATACTACCCTTCCATTACGTCGAAATATCGAAACTTCTTTTTGACCACGCACGAGACGACGTTCCTGACATGTATTTGGTAAGGTCTCTTATTGAAGATATCAGGGATGTTCGGTTTCACAAAGTTGAAACCAGTTTGGAGTCGATTGATACACGCACATCCGCAGTGAAGATTAAAGATCTATCTGCCATGGAAGTGAATATAGTTCGACCGTTTGTCGGTAGAGCGTTGCAGGCAATTTACAAGCACGGAAATCCAGAGTTGGTCCCAGATCAAGAAAGAATGACCAATGTGCAGTCACAAGGACATGATCATGGGCAAAGGAGACCTCTTCGGAGACGGTAGAATCCGCGTCAATTATGATAAGTACATTCTTATTTATATGAGCAGTTCTAAATGAAGCTAGCATAGATTCTTCTTCAAAACCAATTTATGTGTTCACTTATATTTCTTACTCTTAGCTAAACTCTCTCTAGATCATCCCTTTATTACTAGAACGTATGATGCTCATTGTAGATTTGTTAGCATAATAGGCTAACTGGATGTATATGGATCCATGTAGTGATGCTTGTTTACCTTAGATGAAAGGTCAATGATCCAAGTTGTTTTTAATTTAAATGTCTATTTATTTTATTTAGCCTAAAGAGGGGAGCGAGTTACAAATGGTATTAGAGCCAG

Coding sequence (CDS)

ATGGCTGGTCAATCAGATCCTCACCTGACCCTATTTTCTGCAGAAGAGATCGAGTTTGTAGCTGAAGATGAAATGGTGGAGATTGTTCCCAATATGAGAATGGATTCTCTAAATTTGATTTGTGGGGATTATGGTCCATTCTATCCCCAAATCGCCACTGAAGTTCCATTGTGGCTAGCGATTGCTCTGAAAAAAAGAGGGAAATGTGCAATTAGGCCTCCAGAGTGGATGTCTGTTGAAAAGTTGACACAAACGTTGGAGGCAGAACGAGAGTCTCAAGGATCTTTCCAGATACTACCCTTCCATTACGTCGAAATATCGAAACTTCTTTTTGACCACGCACGAGACGACGTTCCTGACATGTATTTGGTAAGGTCTCTTATTGAAGATATCAGGGATGTTCGGTTTCACAAAGTTGAAACCAGTTTGGAGTCGATTGATACACGCACATCCGCAGTGAAGATTAAAGATCTATCTGCCATGGAAGTGAATATAGTTCGACCGTTTGTCGGTAGAGCGTTGCAGGCAATTTACAAGCACGGAAATCCAGAGTTGGTCCCAGATCAAGAAAGAATGACCAATGTGCAGTCACAAGGACATGATCATGGGCAAAGGAGACCTCTTCGGAGACGGTAG

Protein sequence

MAGQSDPHLTLFSAEEIEFVAEDEMVEIVPNMRMDSLNLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRPPEWMSVEKLTQTLEAERESQGSFQILPFHYVEISKLLFDHARDDVPDMYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYKHGNPELVPDQERMTNVQSQGHDHGQRRPLRRR
Homology
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BLAST of Cp4.1LG19g01820 vs. Swiss-Prot
Match: PSF2_ARATH (DNA replication complex GINS protein PSF2 OS=Arabidopsis thaliana GN=GINS2 PE=2 SV=2)

HSP 1 Score: 286.6 bits (732), Expect = 2.2e-76
Identity = 141/211 (66.82%), Postives = 173/211 (81.99%), Query Frame = 1 

Query: 1   MAGQSDPHLTLFSAEEIEFVAEDEMVEIVPNMRMDSLNLICGDYGPFYPQIATEVPLWLA 60
           MAGQ+DPH++LFS +E+EF+AEDE+VEIVPNM M+ LN I GD+G F PQI T+VPLWLA
Sbjct: 1   MAGQTDPHISLFSPQEVEFMAEDELVEIVPNMNMEQLNFISGDFGRFIPQIPTKVPLWLA 60

Query: 61  IALKKRGKCAIRPPEWMSVEKLTQTLEAERESQGSFQILPFHYVEISKLLFDHARDDVPD 120
           +ALK+RGKC  RPP WMSV+ LTQ LEAERESQ +FQ LPF YVEI++LLFDHARDD+PD
Sbjct: 61  VALKRRGKCTFRPPGWMSVDNLTQILEAERESQSTFQALPFSYVEIARLLFDHARDDIPD 120

Query: 121 MYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYKH 180
           MY+VRSL+EDIRDVR HK+ET+L S    TSAVKI ++SAMEVNIVRPFV RAL+A YKH
Sbjct: 121 MYMVRSLVEDIRDVRLHKLETNLGSFQ-GTSAVKISNVSAMEVNIVRPFVIRALEAFYKH 180

Query: 181 GNPELVPDQERMTNVQSQGHDHGQRRPLRRR 212
             PE   D++  ++ Q +  ++  RRPLR+R
Sbjct: 181 DKPEADVDRDTRSSRQQRETNNEPRRPLRQR 210

[Close]
BLAST of Cp4.1LG19g01820 vs. Swiss-Prot
Match: PSF2_MOUSE (DNA replication complex GINS protein PSF2 OS=Mus musculus GN=Gins2 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.6e-34
Identity = 74/167 (44.31%), Postives = 108/167 (64.67%), Query Frame = 1 

Query: 14  AEEIEFVAEDEMVEIVPNMRMDSLNLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRP 73
           A E+EF+AE E+V I+PN  +D + LI GD GPF P +  +VPLWLAI LK+R KC + P
Sbjct: 3   AAEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVDVPLWLAINLKQRQKCRLLP 62

Query: 74  PEWMSVEKLTQTLEAERESQGSFQILPFHYVEISKLLFDHARDDVPDMYLVRSLIEDIRD 133
           PEWM VEKL Q  + ER+ +    +   HY+EI+KLL +HA D++P    +R+LI+D+ D
Sbjct: 63  PEWMDVEKLEQMRDEERKEETFTPVPSPHYMEITKLLLNHASDNIPKADTIRTLIKDLWD 122

Query: 134 VRFHKVETSLESIDTRTSA-VKIKDLSAMEVNIVRPFVGRALQAIYK 180
            R  K+  S +S   +  A  K+ +L+ ME++    F+ +AL  +YK
Sbjct: 123 TRMAKLRVSADSFVRQQEAHAKLDNLTLMEISSSGAFLTQALNHMYK 169

[Close]
BLAST of Cp4.1LG19g01820 vs. Swiss-Prot
Match: PSF2_HUMAN (DNA replication complex GINS protein PSF2 OS=Homo sapiens GN=GINS2 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.2e-33
Identity = 72/167 (43.11%), Postives = 108/167 (64.67%), Query Frame = 1 

Query: 14  AEEIEFVAEDEMVEIVPNMRMDSLNLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRP 73
           A E+EF+AE E+V I+PN  +D + LI GD GPF P +  EVPLWLAI LK+R KC + P
Sbjct: 3   AAEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLP 62

Query: 74  PEWMSVEKLTQTLEAERESQGSFQILPFHYVEISKLLFDHARDDVPDMYLVRSLIEDIRD 133
           PEWM VEKL +  + ER+ +    +   +Y+E++KLL +HA D++P    +R+L++D+ D
Sbjct: 63  PEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDMWD 122

Query: 134 VRFHKVETSLESIDTRTSA-VKIKDLSAMEVNIVRPFVGRALQAIYK 180
            R  K+  S +S   +  A  K+ +L+ ME+N    F+ +AL  +YK
Sbjct: 123 TRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYK 169

[Close]
BLAST of Cp4.1LG19g01820 vs. Swiss-Prot
Match: PSF2_XENLA (DNA replication complex GINS protein PSF2 OS=Xenopus laevis GN=gins2 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.4e-32
Identity = 70/167 (41.92%), Postives = 104/167 (62.28%), Query Frame = 1 

Query: 14  AEEIEFVAEDEMVEIVPNMRMDSLNLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRP 73
           A E+EF+AE E V ++PN  +D + LI GD GPF P +  EVPLWLAI LK+R KC I P
Sbjct: 3   ASEVEFLAEKEQVTVIPNFSLDKVYLIGGDLGPFNPSLPVEVPLWLAINLKQRQKCRIVP 62

Query: 74  PEWMSVEKLTQTLEAERESQGSFQILPFHYVEISKLLFDHARDDVPDMYLVRSLIEDIRD 133
           PEWM VEKL    + ER  +    +   +Y+E++KLL +HA D++P    +R+L++D  D
Sbjct: 63  PEWMDVEKLEAIRDQERREETFTPMPSPYYMELTKLLLNHAADNIPKADEIRTLVKDTWD 122

Query: 134 VRFHKVETSLES-IDTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYK 180
            R  K+  S +S +  + +  K+ +L+ ME+N +  F   +L  +YK
Sbjct: 123 TRIAKLRLSADSFVKGQEAHAKLDNLTLMEINTIGTFFTESLNHMYK 169

[Close]
BLAST of Cp4.1LG19g01820 vs. Swiss-Prot
Match: PSF2_CRYNJ (DNA replication complex GINS protein PSF2 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=PSF2 PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.3e-28
Identity = 63/133 (47.37%), Postives = 88/133 (66.17%), Query Frame = 1 

Query: 15  EEIEFVAEDEMVEIVPNMRMDSLNLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRPP 74
           +E+ F+AE + + IVP   M  + LI G YGPF P  A+ VPLWL ++LKK+ KC I PP
Sbjct: 14  DELAFLAEHDHISIVPLFSMTRVRLISGIYGPFRPPSASRVPLWLGLSLKKKRKCRIVPP 73

Query: 75  EWMSVEKLTQTLEAERESQGSFQILPFHYVEISKLLFDHARDDVPDMYLVRSLIEDIRDV 134
           EW+S E+L   L  E+E+   F+ LP  ++EISK+L D A DD+    L+RSL++DIR+V
Sbjct: 74  EWLSAERLQAFLRDEKENSEGFERLPRRFMEISKVLLDIASDDLSQPTLLRSLLKDIREV 133

Query: 135 RFHKVETSLESID 148
           R  K+   L+S D
Sbjct: 134 RQAKIRMGLQSED 146

[Close]
BLAST of Cp4.1LG19g01820 vs. TrEMBL
Match: A0A0D2VRY9_GOSRA (DNA replication complex GINS protein PSF2 OS=Gossypium raimondii GN=B456_011G261500 PE=3 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 1.2e-87
Identity = 158/210 (75.24%), Postives = 187/210 (89.05%), Query Frame = 1 

Query: 1   MAGQSDPHLTLFSAEEIEFVAEDEMVEIVPNMRMDSLNLICGDYGPFYPQIATEVPLWLA 60
           MAGQSDPH++LFSAEE+EF+AEDE++EIVPNMRMD LN ICGD+GPF PQIA++VPLWLA
Sbjct: 1   MAGQSDPHISLFSAEEVEFMAEDELIEIVPNMRMDPLNFICGDFGPFLPQIASQVPLWLA 60

Query: 61  IALKKRGKCAIRPPEWMSVEKLTQTLEAERESQGSFQILPFHYVEISKLLFDHARDDVPD 120
           +ALKKRGKCAIRPP+WMSVE LT+ LE ERESQG+FQ+LPFHYVEIS+LLFDHAR+D+PD
Sbjct: 61  VALKKRGKCAIRPPQWMSVENLTRVLEGERESQGAFQVLPFHYVEISRLLFDHAREDIPD 120

Query: 121 MYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYKH 180
           MY+VRSLIEDIRDVR HKVETSLE   + TSAVKI +LSAMEVNI+RPFVGRALQA YKH
Sbjct: 121 MYMVRSLIEDIRDVRIHKVETSLEKF-SGTSAVKIPNLSAMEVNIIRPFVGRALQAFYKH 180

Query: 181 GNPELVPDQERMTNVQSQGHDHGQRRPLRR 211
            NPE +PD +R ++ Q++  ++  RR LRR
Sbjct: 181 DNPEKIPDVDRASSAQTRAANNEPRRQLRR 209

[Close]
BLAST of Cp4.1LG19g01820 vs. TrEMBL
Match: A0A0B0MWL0_GOSAR (DNA replication complex GINS protein PSF2 OS=Gossypium arboreum GN=F383_27995 PE=3 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 1.2e-87
Identity = 158/210 (75.24%), Postives = 187/210 (89.05%), Query Frame = 1 

Query: 1   MAGQSDPHLTLFSAEEIEFVAEDEMVEIVPNMRMDSLNLICGDYGPFYPQIATEVPLWLA 60
           MAGQSDPH++LFSAEE+EF+AEDE++EIVPNMRMD LN ICGD+GPF PQIA++VPLWLA
Sbjct: 1   MAGQSDPHISLFSAEEVEFMAEDELIEIVPNMRMDPLNFICGDFGPFLPQIASQVPLWLA 60

Query: 61  IALKKRGKCAIRPPEWMSVEKLTQTLEAERESQGSFQILPFHYVEISKLLFDHARDDVPD 120
           +ALKKRGKCAIRPP+WMSVE LT+ LE ERESQG+FQ+LPFHYVEIS+LLFDHAR+D+PD
Sbjct: 61  VALKKRGKCAIRPPQWMSVENLTRVLEGERESQGAFQVLPFHYVEISRLLFDHAREDIPD 120

Query: 121 MYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYKH 180
           MY+VRSLIEDIRDVR HKVETSLE   + TSAVKI +LSAMEVNI+RPFVGRALQA YKH
Sbjct: 121 MYMVRSLIEDIRDVRIHKVETSLEKF-SGTSAVKIPNLSAMEVNIIRPFVGRALQAFYKH 180

Query: 181 GNPELVPDQERMTNVQSQGHDHGQRRPLRR 211
            NPE +PD +R ++ Q++  ++  RR LRR
Sbjct: 181 DNPEKIPDVDRASSAQTRAANNEPRRQLRR 209

[Close]
BLAST of Cp4.1LG19g01820 vs. TrEMBL
Match: A0A061FNA9_THECC (DNA replication complex GINS protein PSF2 OS=Theobroma cacao GN=TCM_042758 PE=3 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.5e-87
Identity = 159/210 (75.71%), Postives = 187/210 (89.05%), Query Frame = 1 

Query: 1   MAGQSDPHLTLFSAEEIEFVAEDEMVEIVPNMRMDSLNLICGDYGPFYPQIATEVPLWLA 60
           MAGQSDPH++LFSAEE+EF+AEDE++EIVPNMRMD LN ICGD+GPF PQIAT+VP+WLA
Sbjct: 1   MAGQSDPHISLFSAEEVEFMAEDELIEIVPNMRMDPLNFICGDFGPFLPQIATQVPMWLA 60

Query: 61  IALKKRGKCAIRPPEWMSVEKLTQTLEAERESQGSFQILPFHYVEISKLLFDHARDDVPD 120
           +ALKKRGKCAIRPP WMSVE LT+ LE ER+SQG+FQ+LPFHYVEIS+LLFDHARDD+PD
Sbjct: 61  VALKKRGKCAIRPPLWMSVENLTKVLEGERDSQGAFQVLPFHYVEISRLLFDHARDDIPD 120

Query: 121 MYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYKH 180
           MY+VRSLIEDIRDVR HKVETSLE   + TSAVKI +LSAMEVNI+RPFVGRALQA YKH
Sbjct: 121 MYMVRSLIEDIRDVRVHKVETSLEKF-SGTSAVKIPNLSAMEVNIIRPFVGRALQAFYKH 180

Query: 181 GNPELVPDQERMTNVQSQGHDHGQRRPLRR 211
            NPE +PD +R ++ Q++  ++  RRPLRR
Sbjct: 181 DNPEKIPDVDRASSGQTRVANNEPRRPLRR 209

[Close]
BLAST of Cp4.1LG19g01820 vs. TrEMBL
Match: W9SBK8_9ROSA (DNA replication complex GINS protein PSF2 OS=Morus notabilis GN=L484_012008 PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.1e-85
Identity = 156/210 (74.29%), Postives = 186/210 (88.57%), Query Frame = 1 

Query: 1   MAGQSDPHLTLFSAEEIEFVAEDEMVEIVPNMRMDSLNLICGDYGPFYPQIATEVPLWLA 60
           MAGQSDPH + FSA+E+EF+AEDE++EIVPNM+M+ LNLICGDYGPF+PQ+ T+VP+WLA
Sbjct: 1   MAGQSDPHPSHFSAQEVEFMAEDEIIEIVPNMKMEPLNLICGDYGPFFPQMVTQVPIWLA 60

Query: 61  IALKKRGKCAIRPPEWMSVEKLTQTLEAERESQGSFQILPFHYVEISKLLFDHARDDVPD 120
           IALKKRGKCAIRPP WMS+E LT+ LE+ERESQ +FQ+LPFHYVEIS+LLFDHARDD+ D
Sbjct: 61  IALKKRGKCAIRPPSWMSIESLTRILESERESQEAFQVLPFHYVEISRLLFDHARDDISD 120

Query: 121 MYLVRSLIEDIRDVRFHKVETSLESI-DTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYK 180
           +Y+VRSLIEDIRDVRFHKVETSLES  D R+SAV+I +LSAMEVNIVRPFVGRALQA YK
Sbjct: 121 IYMVRSLIEDIRDVRFHKVETSLESFEDARSSAVRINNLSAMEVNIVRPFVGRALQAFYK 180

Query: 181 HGNPELVPDQERMTNVQS----QGHDHGQR 206
           HG+P+L+P+ ER++N  S    Q  D GQR
Sbjct: 181 HGSPDLIPNPERVSNSISNRWQQAPDQGQR 210

[Close]
BLAST of Cp4.1LG19g01820 vs. TrEMBL
Match: A0A0J8CXJ5_BETVU (DNA replication complex GINS protein PSF2 OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g024770 PE=3 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.5e-82
Identity = 152/211 (72.04%), Postives = 181/211 (85.78%), Query Frame = 1 

Query: 1   MAGQSDPHLTLFSAEEIEFVAEDEMVEIVPNMRMDSLNLICGDYGPFYPQIATEVPLWLA 60
           MAGQSDP  ++FSA E+EF+AEDEM+EIVPNMRMD+LNLI GDYGPF PQIAT+VPLWLA
Sbjct: 1   MAGQSDPQSSVFSAAEMEFLAEDEMIEIVPNMRMDALNLISGDYGPFRPQIATKVPLWLA 60

Query: 61  IALKKRGKCAIRPPEWMSVEKLTQTLEAERESQGSFQILPFHYVEISKLLFDHARDDVPD 120
           +ALKKRGKC +RPPEWM++++LTQ LEAER+S   FQ LPFHYVEIS+LLFDHARDD+PD
Sbjct: 61  VALKKRGKCTVRPPEWMTIDRLTQILEAERDSPKEFQPLPFHYVEISRLLFDHARDDIPD 120

Query: 121 MYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYKH 180
           +Y+VRSLIEDIRDVRFHKVE+ LE+I  RT AVK+K+LSAMEVNIVRPFV R LQA YKH
Sbjct: 121 IYMVRSLIEDIRDVRFHKVESGLETISARTHAVKLKNLSAMEVNIVRPFVIRTLQAFYKH 180

Query: 181 GNPELVPDQERMTNVQSQGHDHGQRRPLRRR 212
            +PE++    +M++ + Q  D G RR LRRR
Sbjct: 181 DSPEMIQQPVQMSSRRPQVTDRGPRRDLRRR 211

[Close]
BLAST of Cp4.1LG19g01820 vs. TAIR10
Match: AT3G12530.1 (AT3G12530.1 PSF2)

HSP 1 Score: 286.6 bits (732), Expect = 1.3e-77
Identity = 141/211 (66.82%), Postives = 173/211 (81.99%), Query Frame = 1 

Query: 1   MAGQSDPHLTLFSAEEIEFVAEDEMVEIVPNMRMDSLNLICGDYGPFYPQIATEVPLWLA 60
           MAGQ+DPH++LFS +E+EF+AEDE+VEIVPNM M+ LN I GD+G F PQI T+VPLWLA
Sbjct: 1   MAGQTDPHISLFSPQEVEFMAEDELVEIVPNMNMEQLNFISGDFGRFIPQIPTKVPLWLA 60

Query: 61  IALKKRGKCAIRPPEWMSVEKLTQTLEAERESQGSFQILPFHYVEISKLLFDHARDDVPD 120
           +ALK+RGKC  RPP WMSV+ LTQ LEAERESQ +FQ LPF YVEI++LLFDHARDD+PD
Sbjct: 61  VALKRRGKCTFRPPGWMSVDNLTQILEAERESQSTFQALPFSYVEIARLLFDHARDDIPD 120

Query: 121 MYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYKH 180
           MY+VRSL+EDIRDVR HK+ET+L S    TSAVKI ++SAMEVNIVRPFV RAL+A YKH
Sbjct: 121 MYMVRSLVEDIRDVRLHKLETNLGSFQ-GTSAVKISNVSAMEVNIVRPFVIRALEAFYKH 180

Query: 181 GNPELVPDQERMTNVQSQGHDHGQRRPLRRR 212
             PE   D++  ++ Q +  ++  RRPLR+R
Sbjct: 181 DKPEADVDRDTRSSRQQRETNNEPRRPLRQR 210

[Close]
BLAST of Cp4.1LG19g01820 vs. NCBI nr
Match: gi|659125855|ref|XP_008462891.1| (PREDICTED: DNA replication complex GINS protein PSF2 isoform X1 [Cucumis melo])

HSP 1 Score: 398.3 bits (1022), Expect = 8.5e-108
Identity = 197/211 (93.36%), Postives = 206/211 (97.63%), Query Frame = 1 

Query: 1   MAGQSDPHLTLFSAEEIEFVAEDEMVEIVPNMRMDSLNLICGDYGPFYPQIATEVPLWLA 60
           MAGQSDP L LFSAEE+EFVAEDEM+EIVPNMRMDSL+LICGDYGPFYPQIATEVPLWLA
Sbjct: 1   MAGQSDPQLNLFSAEEVEFVAEDEMLEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLA 60

Query: 61  IALKKRGKCAIRPPEWMSVEKLTQTLEAERESQGSFQILPFHYVEISKLLFDHARDDVPD 120
           IALKKRGKCAIR PEWMSVEKLTQ LEAER+SQGSFQILPFHYVEISKLLFDHARDDVPD
Sbjct: 61  IALKKRGKCAIRTPEWMSVEKLTQILEAERDSQGSFQILPFHYVEISKLLFDHARDDVPD 120

Query: 121 MYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYKH 180
           MYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFV RALQAIYKH
Sbjct: 121 MYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVVRALQAIYKH 180

Query: 181 GNPELVPDQERMTNVQSQGHDHGQRRPLRRR 212
           GNPELVPDQ+R+TN+Q+QGH+HGQRRPLRRR
Sbjct: 181 GNPELVPDQDRITNMQTQGHEHGQRRPLRRR 211

[Close]
BLAST of Cp4.1LG19g01820 vs. NCBI nr
Match: gi|449438757|ref|XP_004137154.1| (PREDICTED: DNA replication complex GINS protein PSF2 isoform X1 [Cucumis sativus])

HSP 1 Score: 397.5 bits (1020), Expect = 1.4e-107
Identity = 199/212 (93.87%), Postives = 206/212 (97.17%), Query Frame = 1 

Query: 1   MAGQSDPHLTLFSAEEIEFVAEDEMVEIVPNMRMDSLNLICGDYGPFYPQIATEVPLWLA 60
           MAGQSDPHL LFSAEE+EFVAEDEMVEI+PNMRMDSL+LICGDYGPFYPQIATEVPLWLA
Sbjct: 1   MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLA 60

Query: 61  IALKKRGKCAIRPPEWMSVEKLTQTLEAERESQGSFQILPFHYVEISKLLFDHARDDVPD 120
           IALKKRGKCAIR PEWMSVEKLTQ LEAER+SQGSFQILPFHYVEISKLLFDHARDDVPD
Sbjct: 61  IALKKRGKCAIRTPEWMSVEKLTQILEAERDSQGSFQILPFHYVEISKLLFDHARDDVPD 120

Query: 121 MYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYKH 180
           MYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFV RALQAIYKH
Sbjct: 121 MYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVVRALQAIYKH 180

Query: 181 GNPELVPDQERMTNVQSQGHDHGQ-RRPLRRR 212
           GNPELVPDQ+RMTN+Q+QG DHGQ RRPLRRR
Sbjct: 181 GNPELVPDQDRMTNMQTQGQDHGQRRRPLRRR 212

[Close]
BLAST of Cp4.1LG19g01820 vs. NCBI nr
Match: gi|470143706|ref|XP_004307512.1| (PREDICTED: DNA replication complex GINS protein PSF2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 336.3 bits (861), Expect = 3.9e-89
Identity = 164/212 (77.36%), Postives = 190/212 (89.62%), Query Frame = 1 

Query: 1   MAGQSDPHLTLFSAEEIEFVAEDEMVEIVPNMRMDSLNLICGDYGPFYPQIATEVPLWLA 60
           MAGQSDPHL++FSAEE+EF+AEDE+VEIVPNMRMD L LICGD+GPF+PQ+  +VPLWLA
Sbjct: 1   MAGQSDPHLSIFSAEEVEFMAEDELVEIVPNMRMDKLTLICGDFGPFFPQMPAQVPLWLA 60

Query: 61  IALKKRGKCAIRPPEWMSVEKLTQTLEAERESQGSFQILPFHYVEISKLLFDHARDDVPD 120
           IALKKRGKC IR P+WMSVE L+QTLEAER+SQ SFQ+LPFHYVEIS+LLFDHAR D+PD
Sbjct: 61  IALKKRGKCTIRLPDWMSVENLSQTLEAERDSQESFQVLPFHYVEISRLLFDHARGDIPD 120

Query: 121 MYLVRSLIEDIRDVRFHKVETSLESI-DTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYK 180
           +Y VRSLIEDIRDVRFHKVETSLES  D R+SAVK+K+LSAMEVN+VRPFVGRALQA YK
Sbjct: 121 VYTVRSLIEDIRDVRFHKVETSLESFEDARSSAVKVKNLSAMEVNLVRPFVGRALQAFYK 180

Query: 181 HGNPELVPDQERMTNVQSQGHDHGQRRPLRRR 212
           HG+P+LVP+ ERM   + Q  D+ QRRPLR+R
Sbjct: 181 HGSPDLVPNPERMPPRRPQATDNVQRRPLRKR 212

[Close]
BLAST of Cp4.1LG19g01820 vs. NCBI nr
Match: gi|823250144|ref|XP_012457669.1| (PREDICTED: DNA replication complex GINS protein PSF2 [Gossypium raimondii])

HSP 1 Score: 330.9 bits (847), Expect = 1.7e-87
Identity = 158/210 (75.24%), Postives = 187/210 (89.05%), Query Frame = 1 

Query: 1   MAGQSDPHLTLFSAEEIEFVAEDEMVEIVPNMRMDSLNLICGDYGPFYPQIATEVPLWLA 60
           MAGQSDPH++LFSAEE+EF+AEDE++EIVPNMRMD LN ICGD+GPF PQIA++VPLWLA
Sbjct: 1   MAGQSDPHISLFSAEEVEFMAEDELIEIVPNMRMDPLNFICGDFGPFLPQIASQVPLWLA 60

Query: 61  IALKKRGKCAIRPPEWMSVEKLTQTLEAERESQGSFQILPFHYVEISKLLFDHARDDVPD 120
           +ALKKRGKCAIRPP+WMSVE LT+ LE ERESQG+FQ+LPFHYVEIS+LLFDHAR+D+PD
Sbjct: 61  VALKKRGKCAIRPPQWMSVENLTRVLEGERESQGAFQVLPFHYVEISRLLFDHAREDIPD 120

Query: 121 MYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYKH 180
           MY+VRSLIEDIRDVR HKVETSLE   + TSAVKI +LSAMEVNI+RPFVGRALQA YKH
Sbjct: 121 MYMVRSLIEDIRDVRIHKVETSLEKF-SGTSAVKIPNLSAMEVNIIRPFVGRALQAFYKH 180

Query: 181 GNPELVPDQERMTNVQSQGHDHGQRRPLRR 211
            NPE +PD +R ++ Q++  ++  RR LRR
Sbjct: 181 DNPEKIPDVDRASSAQTRAANNEPRRQLRR 209

[Close]
BLAST of Cp4.1LG19g01820 vs. NCBI nr
Match: gi|590563300|ref|XP_007009331.1| (PSF2 isoform 1 [Theobroma cacao])

HSP 1 Score: 330.5 bits (846), Expect = 2.2e-87
Identity = 159/210 (75.71%), Postives = 187/210 (89.05%), Query Frame = 1 

Query: 1   MAGQSDPHLTLFSAEEIEFVAEDEMVEIVPNMRMDSLNLICGDYGPFYPQIATEVPLWLA 60
           MAGQSDPH++LFSAEE+EF+AEDE++EIVPNMRMD LN ICGD+GPF PQIAT+VP+WLA
Sbjct: 1   MAGQSDPHISLFSAEEVEFMAEDELIEIVPNMRMDPLNFICGDFGPFLPQIATQVPMWLA 60

Query: 61  IALKKRGKCAIRPPEWMSVEKLTQTLEAERESQGSFQILPFHYVEISKLLFDHARDDVPD 120
           +ALKKRGKCAIRPP WMSVE LT+ LE ER+SQG+FQ+LPFHYVEIS+LLFDHARDD+PD
Sbjct: 61  VALKKRGKCAIRPPLWMSVENLTKVLEGERDSQGAFQVLPFHYVEISRLLFDHARDDIPD 120

Query: 121 MYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYKH 180
           MY+VRSLIEDIRDVR HKVETSLE   + TSAVKI +LSAMEVNI+RPFVGRALQA YKH
Sbjct: 121 MYMVRSLIEDIRDVRVHKVETSLEKF-SGTSAVKIPNLSAMEVNIIRPFVGRALQAFYKH 180

Query: 181 GNPELVPDQERMTNVQSQGHDHGQRRPLRR 211
            NPE +PD +R ++ Q++  ++  RRPLRR
Sbjct: 181 DNPEKIPDVDRASSGQTRVANNEPRRPLRR 209

The following BLAST results are available for this feature:
BLAST of Cp4.1LG19g01820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PSF2_ARATH2.2e-7666.82DNA replication complex GINS protein PSF2 OS=Arabidopsis thaliana GN=GINS2 PE=2 ... [more]
PSF2_MOUSE3.6e-3444.31DNA replication complex GINS protein PSF2 OS=Mus musculus GN=Gins2 PE=1 SV=1[more]
PSF2_HUMAN5.2e-3343.11DNA replication complex GINS protein PSF2 OS=Homo sapiens GN=GINS2 PE=1 SV=1[more]
PSF2_XENLA3.4e-3241.92DNA replication complex GINS protein PSF2 OS=Xenopus laevis GN=gins2 PE=1 SV=1[more]
PSF2_CRYNJ2.3e-2847.37DNA replication complex GINS protein PSF2 OS=Cryptococcus neoformans var. neofor... [more]
BLAST of Cp4.1LG19g01820 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D2VRY9_GOSRA1.2e-8775.24DNA replication complex GINS protein PSF2 OS=Gossypium raimondii GN=B456_011G261... [more]
A0A0B0MWL0_GOSAR1.2e-8775.24DNA replication complex GINS protein PSF2 OS=Gossypium arboreum GN=F383_27995 PE... [more]
A0A061FNA9_THECC1.5e-8775.71DNA replication complex GINS protein PSF2 OS=Theobroma cacao GN=TCM_042758 PE=3 ... [more]
W9SBK8_9ROSA3.1e-8574.29DNA replication complex GINS protein PSF2 OS=Morus notabilis GN=L484_012008 PE=3... [more]
A0A0J8CXJ5_BETVU1.5e-8272.04DNA replication complex GINS protein PSF2 OS=Beta vulgaris subsp. vulgaris GN=BV... [more]
BLAST of Cp4.1LG19g01820 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12530.11.3e-7766.82 PSF2[more]
BLAST of Cp4.1LG19g01820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659125855|ref|XP_008462891.1|8.5e-10893.36PREDICTED: DNA replication complex GINS protein PSF2 isoform X1 [Cucumis melo][more]
gi|449438757|ref|XP_004137154.1|1.4e-10793.87PREDICTED: DNA replication complex GINS protein PSF2 isoform X1 [Cucumis sativus... [more]
gi|470143706|ref|XP_004307512.1|3.9e-8977.36PREDICTED: DNA replication complex GINS protein PSF2 [Fragaria vesca subsp. vesc... [more]
gi|823250144|ref|XP_012457669.1|1.7e-8775.24PREDICTED: DNA replication complex GINS protein PSF2 [Gossypium raimondii][more]
gi|590563300|ref|XP_007009331.1|2.2e-8775.71PSF2 isoform 1 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR021151GINS_A
IPR007257GINS_Psf2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006260 DNA replication
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g01820.1Cp4.1LG19g01820.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007257DNA replication complex GINS protein Psf2PIRPIRSF028998GINS_PSF2coord: 2..211
score: 2.6
IPR007257DNA replication complex GINS protein Psf2PANTHERPTHR12772DNA REPLICATION COMPLEX GINS PROTEIN PSF2coord: 1..206
score: 4.4
IPR021151GINS complexPFAMPF05916Sld5coord: 53..162
score: 4.3
NoneNo IPR availablePANTHERPTHR12772:SF0DNA REPLICATION COMPLEX GINS PROTEIN PSF2coord: 1..206
score: 4.4
NoneNo IPR availableunknownSSF158573GINS helical bundle-likecoord: 73..182
score: 1.1
NoneNo IPR availableunknownSSF160059PriA/YqbF domaincoord: 12..71
score: 3.92

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG19g01820CmaCh07G011860Cucurbita maxima (Rimu)cmacpeB880
Cp4.1LG19g01820CmoCh07G012330Cucurbita moschata (Rifu)cmocpeB817
Cp4.1LG19g01820Carg12625Silver-seed gourdcarcpeB0400
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG19g01820Cucumber (Gy14) v2cgybcpeB520
Cp4.1LG19g01820Cucumber (Gy14) v2cgybcpeB533
Cp4.1LG19g01820Melon (DHL92) v3.6.1cpemedB542
Cp4.1LG19g01820Silver-seed gourdcarcpeB0893
Cp4.1LG19g01820Cucumber (Chinese Long) v3cpecucB0598
Cp4.1LG19g01820Cucumber (Chinese Long) v3cpecucB0612
Cp4.1LG19g01820Wax gourdcpewgoB0598
Cp4.1LG19g01820Cucurbita pepo (Zucchini)cpecpeB077
Cp4.1LG19g01820Cucurbita maxima (Rimu)cmacpeB672
Cp4.1LG19g01820Cucurbita moschata (Rifu)cmocpeB625
Cp4.1LG19g01820Wild cucumber (PI 183967)cpecpiB487
Cp4.1LG19g01820Cucumber (Chinese Long) v2cpecuB486
Cp4.1LG19g01820Bottle gourd (USVL1VR-Ls)cpelsiB391
Cp4.1LG19g01820Watermelon (Charleston Gray)cpewcgB436
Cp4.1LG19g01820Watermelon (97103) v1cpewmB491
Cp4.1LG19g01820Melon (DHL92) v3.5.1cpemeB459