Cp4.1LG19g00530 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTCATGAACGGTGTGGAAAGGGTTAGAAGGGAATTGGATTAGCGATTGGCATAAGCATCCCGCGAGAAAAAGAAAGTCGGTGTTCTTGTTCCGTGAATGGAATGCGACCAAAACCCCGCATCCCTATTTCTCTCTATTTCTTTTTATTTTTCTGAATCGCTTTGTTTCCCTACAAATACGAGAATGCTCCTCAAACTTCCCTACGCCACTTCTCTCTTCTGTAGCGCTTCTAATTTCTTCTATTCTGGGGTTCTTGTGATTTTGTAGAAACCAGGAGCGAAGTTTTTTCTGGGTTTCACACAACACATTCAATTACTCTTGCGATTTCGCGAGCTTAGCGGCCCCTTAGCTCGGAATTCGCAACAGGTAACATTGTCTGATGCCTTTCGATTTTGTTTTTTGGCTTTGATTTTGATGATTCTGGCTCTGGTTTTGCCTCGTTCTTACATTTGTTATATGTTTCTGAATGTGGCGCTTGGATTCTTAGAGATCGTGGATTTGTGTTTGTTTTCTGGCGCTTGGATTCTTTGTTTTTTTTTCATAGATTTTATGTGTTTTGGAACTCTCCATTTACATTATTGATAGTGCTTCTGGGAATTGGATTTTTGGAGTTTATTATGCTTTTGGAGGGCTTGAGTTGGGAATCTGTGATATCCGAGAACGAAACATTCTTGTTTTAAAAACCTTAAGGGAAAGGCTAGAGAGGACAATATTTGCTAGTGGTAGGTTTGGGCCGTTACAAATGGTATCAGAGGCCGACACTAGGCGATGTGCTAGTGGAAGGCTGAGCCCTGAAGGAGGGTGGACACGAGGTGGTGTGACAACGAGGTCTTTGGGCCCTGAAGAAGGGTGGATTGTGAGATCCCACATTAGTTGGGGAGGAAAATGAAACATTATTTATAAGGGTGTGGAAACTTCTCCCTAGGAGACGTTTTAAAAACCTTGAGGGGAAGCTTGAAAGGGAAAGCCCAAAGAACACAATATTTGCTAACGGTGGACTTGGGCCGTTACATATGGTATCAGAGTAGACACTGAGCGATGTGCTAGTGGAAGGTTGAGCTCCGAAGGATGGTGGACATGAGGCGGTGTGCCAACGAGGACGCTGGGCCCCGAAGGAGGGTGGATTGTGAGATCCCACCTCGGTTGAAACATTATTTATACGGGTGTCGAAAACTCTCCCTAGCAAACATGCTTTAAAAACCTTGAGGGGAATCCCGAAAGAGAGCCTAAAGAGGACAATATCTACTAGCGCTGAGCTTGGGCCGTTACGAAATCCTTGTTCGTTCTTTCTTTCTTGCTGGTTTATGTGTTGTAATTTCATTATTTCGTGCAATTTCTTGTGTGTTTATGATTGAATGTTTTGAGTTTCTTCTTGAATCCTCAAGTATTTTGATTTGAATCTCATCTCTCATTCCATCTGTCTTGATCAGGGTAATCTAGAACTTGGAGGATTAAATTTCTCCATGGTGAGCTTTTAATTCTTCTTCAAAAAACCTTTCCTGTTCTGGCAAAAATATGCTTAAACTTTGATTAATTATGTGGACTACGTAAAAGAGCCAATTGTGTTGGCTTTTGTGCTCATTAGGGAGAAGCCGCAGCTTTCTTGGTTCATGATTTGAAGGAGGGATTCCCGAACGGGTTCGGTTTAAAATCGAAAGGTTGTGAAACAGCCACCGTCATCGGCAATAAAACAGTACGCTGACTTACTTTGTATTGTTTGTTCTATAGTTATTGTGATGCATCAAGAACTCATCTCTGAAAGTCTTAGCTTTTTGATATGCTTTGGTAGTATGTCGTTGACGGAGGCTGTGATGACTCGATATTGTCCTTTCGAGTTCAAGTATTCGATCATTCGACAGGAACACGGTGAGCTTCTCCCGTGGTTATGCAATTTATTCTTTTAGTTCTAGTCTTCTAAGTTTCGGTGGATTTTCAGGATCGATCCTGTCGTTTTGGGAACGATACCGAATCCATGTAAAGGGCATTCGGCAATAGCTTTAAACGAAGATCGTATATTGTTTATTAAGGGTGGATCGCCCTTACATGATTCCTTTTGGTTTCTCGAGGTATGTGTTCATGAGGATTCAACAACACAAGATCACTCAGTGTTACACCTGATTCTTATGATATGTATCAATTTTTATACGAGTAGGTGAATACTCCATATGTCCAAGAACGAACACGATCTTTGGGTTGTGAAGTTGTTGCTTGGAGTAAAGGGGTGAGGGGAACTGTTGAGAAGCCGATCGTTGTTAGCGGTCCGTCTGGGGTGGGTAAGGGTACTCTTATATCCATGCTCATGAAAGAATTCCCGTCTTTGTTTGGATTCTCTGTTAGCCACACGACCCGTGCTCCGAGAAACATGGAGAAAGATGGGCTTCATTACCATTTTACGGAACGAAACGCAATGGAAAAGGACATAAAAGAGGGGAAATTTCTCGAGTTTGCTTCAGTTCACGGAAACCTCTATGGAACAAGTGTCGAAGCTGTTGAAGTGGTCGCCGATGCCGGGAAAGTATGAAAATTCAGTTTGCTTCCATTTGAGAATCGTTTTTCGGTTTTATCGAATCTGTATGATATATTCATCATATCTTCTGGATCTTCCATGTAGAGATGCATTCTCGACATTGATGTTCAAGGTGCAAGGTCCGTGAAGGCTAGCTCCCTCGACGCTATATTCATCTTCATCTGTCCACCTTCAATGGCTGAACTCGAGAAACGTCTTCGTGCAAGGTGAGTTAAACGATACCATCGTCCATTCACGTTACGAGTCTGAATATATGCATTGTTACATCCTCAGGGGAACCGAAACCGAAGAACAAATCCTCAAACGACTACAAAACGCCAAGGCCGAGATCGTGCAAGGAGAATCATCTGGAATATTTGATCATTTCTTGTACAATGATAACCTTGAAGAGTGCTACAAGAATCTCAAGGTAATTCCTCATGAAATGGAATGAAACTATGTGTTCAATCATCTTTTTGATGATTCAAATCATTTCAGAAACTCTTGGGGCTTGATGGGAGTGTCAATACTTGCACTAAATCAATCCCAGAAGATTTCGACCTTCCTCCGATCGTTCATTCGGTGTCGAGGATCGATAACAAAATAATAATAACCAACCGAGCTTCAAATCTCAAGAACGAATCCCGAAAGACGTAAGTACTCGAGTCACGATTTCTATCGATATGATTTGAAAGTTAGGGTGTTCAATGTGTTTATTTACAACTTTTTCGGAAGCAGGATCGTGCTGGATTTAACCTCGCTCAAAGGTGGTGCACCTGGCCGGACTAGAGGGCTGGATGTGTATCCGATCGATTCGGTTTCTAACGGCTCGAATATGATCAATCAGCTTAGCTAACAGCTCTACCAATGATTTATGCTACTAACCTGTTACTACCCTTTCACAGATGACGTCGAACTTCGACGGTGCATTCCCAATTGAATTATATTGATTCGAGACGACGTTACAAGTTTGATTTTTCTCGCTCGCGTTTTAAGTTAGGAAGAGAAACGACTCGATTGAAAAGGTCGAACGATCATTATTGTTTCTTAGGTAGGCTGGTAGAACGTGATCATTGATTTTTCTTTGCCAAATTGGGTCTGATCATTTATCCAACACTAATTTGTTATTGCTTTCTTCTTAGAAATTGAAAGTCCTATTTTTTCAGATTTCTTTTTTATGTTGAATGGGTTTCTCTGGGTTCTTGC TATTCATGAACGGTGTGGAAAGGGTTAGAAGGGAATTGGATTAGCGATTGGCATAAGCATCCCGCGAGAAAAAGAAAAAACCAGGAGCGAAGTTTTTTCTGGGTTTCACACAACACATTCAATTACTCTTGCGATTTCGCGAGCTTAGCGGCCCCTTAGCTCGGAATTCGCAACAGGGAGAAGCCGCAGCTTTCTTGGTTCATGATTTGAAGGAGGGATTCCCGAACGGGTTCGGTTTAAAATCGAAAGGTTGTGAAACAGCCACCGTCATCGGCAATAAAACATATGTCGTTGACGGAGGCTGTGATGACTCGATATTGTCCTTTCGAGTTCAAGTATTCGATCATTCGACAGGAACACGGATCGATCCTGTCGTTTTGGGAACGATACCGAATCCATGTAAAGGGCATTCGGCAATAGCTTTAAACGAAGATCGTATATTGTTTATTAAGGGTGGATCGCCCTTACATGATTCCTTTTGGTTTCTCGAGGTGAATACTCCATATGTCCAAGAACGAACACGATCTTTGGGTTGTGAAGTTGTTGCTTGGAGTAAAGGGGTGAGGGGAACTGTTGAGAAGCCGATCGTTGTTAGCGGTCCGTCTGGGGTGGGTAAGGGTACTCTTATATCCATGCTCATGAAAGAATTCCCGTCTTTGTTTGGATTCTCTAGATGCATTCTCGACATTGATGTTCAAGGTGCAAGGTCCGTGAAGGCTAGCTCCCTCGACGCTATATTCATCTTCATCTGTCCACCTTCAATGGCTGAACTCGAGAAACGTCTTCGTGCAAGGGGAACCGAAACCGAAGAACAAATCCTCAAACGACTACAAAACGCCAAGGCCGAGATCGTGCAAGGAGAATCATCTGGAATATTTGATCATTTCTTGTACAATGATAACCTTGAAGAGTGCTACAAGAATCTCAAGAAACTCTTGGGGCTTGATGGGAGTGTCAATACTTGCACTAAATCAATCCCAGAAGATTTCGACCTTCCTCCGATCGTTCATTCGGTGTCGAGGATCGATAACAAAATAATAATAACCAACCGAGCTTCAAATCTCAAGAACGAATCCCGAAAGACGATCGTGCTGGATTTAACCTCGCTCAAAGGTGGTGCACCTGGCCGGACTAGAGGGCTGGATGTGTATCCGATCGATTCGGTTTCTAACGGCTCGAATATGATCAATCAGCTTAGCTAACAGCTCTACCAATGATTTATGCTACTAACCTGTTACTACCCTTTCACAGATGACGTCGAACTTCGACGGTGCATTCCCAATTGAATTATATTGATTCGAGACGACGTTACAAGTTTGATTTTTCTCGCTCGCGTTTTAAGTTAGGAAGAGAAACGACTCGATTGAAAAGGTCGAACGATCATTATTGTTTCTTAGGTAGGCTGGTAGAACGTGATCATTGATTTTTCTTTGCCAAATTGGGTCTGATCATTTATCCAACACTAATTTGTTATTGCTTTCTTCTTAGAAATTGAAAGTCCTATTTTTTCAGATTTCTTTTTTATGTTGAATGGGTTTCTCTGGGTTCTTGC ATGCTCATGAAAGAATTCCCGTCTTTGTTTGGATTCTCTAGATGCATTCTCGACATTGATGTTCAAGGTGCAAGGTCCGTGAAGGCTAGCTCCCTCGACGCTATATTCATCTTCATCTGTCCACCTTCAATGGCTGAACTCGAGAAACGTCTTCGTGCAAGGGGAACCGAAACCGAAGAACAAATCCTCAAACGACTACAAAACGCCAAGGCCGAGATCGTGCAAGGAGAATCATCTGGAATATTTGATCATTTCTTGTACAATGATAACCTTGAAGAGTGCTACAAGAATCTCAAGAAACTCTTGGGGCTTGATGGGAGTGTCAATACTTGCACTAAATCAATCCCAGAAGATTTCGACCTTCCTCCGATCGTTCATTCGGTGTCGAGGATCGATAACAAAATAATAATAACCAACCGAGCTTCAAATCTCAAGAACGAATCCCGAAAGACGATCGTGCTGGATTTAACCTCGCTCAAAGGTGGTGCACCTGGCCGGACTAGAGGGCTGGATGTGTATCCGATCGATTCGGTTTCTAACGGCTCGAATATGATCAATCAGCTTAGCTAA MLMKEFPSLFGFSRCILDIDVQGARSVKASSLDAIFIFICPPSMAELEKRLRARGTETEEQILKRLQNAKAEIVQGESSGIFDHFLYNDNLEECYKNLKKLLGLDGSVNTCTKSIPEDFDLPPIVHSVSRIDNKIIITNRASNLKNESRKTIVLDLTSLKGGAPGRTRGLDVYPIDSVSNGSNMINQLS
BLAST of Cp4.1LG19g00530 vs. Swiss-Prot
Match: GMK2_ARATH (Guanylate kinase 2 OS=Arabidopsis thaliana GN=GK-2 PE=2 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 3.0e-48 Identity = 104/157 (66.24%), Postives = 121/157 (77.07%), Query Frame = 1
BLAST of Cp4.1LG19g00530 vs. Swiss-Prot
Match: GMK1_ARATH (Guanylate kinase 1 OS=Arabidopsis thaliana GN=GK-1 PE=1 SV=3) HSP 1 Score: 191.8 bits (486), Expect = 6.7e-48 Identity = 105/157 (66.88%), Postives = 123/157 (78.34%), Query Frame = 1
BLAST of Cp4.1LG19g00530 vs. Swiss-Prot
Match: GMK1_ORYSJ (Guanylate kinase 1 OS=Oryza sativa subsp. japonica GN=GK1 PE=2 SV=2) HSP 1 Score: 177.9 bits (450), Expect = 1.0e-43 Identity = 92/163 (56.44%), Postives = 117/163 (71.78%), Query Frame = 1
BLAST of Cp4.1LG19g00530 vs. Swiss-Prot
Match: KGUA_SCHPO (Guanylate kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1198.05 PE=3 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.5e-18 Identity = 45/88 (51.14%), Postives = 62/88 (70.45%), Query Frame = 1
BLAST of Cp4.1LG19g00530 vs. Swiss-Prot
Match: KGUA_PIG (Guanylate kinase OS=Sus scrofa GN=GUK1 PE=1 SV=2) HSP 1 Score: 91.3 bits (225), Expect = 1.2e-17 Identity = 42/88 (47.73%), Postives = 62/88 (70.45%), Query Frame = 1
BLAST of Cp4.1LG19g00530 vs. TrEMBL
Match: A0A0A0KZN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G161850 PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 3.3e-78 Identity = 149/176 (84.66%), Postives = 165/176 (93.75%), Query Frame = 1
BLAST of Cp4.1LG19g00530 vs. TrEMBL
Match: B9H9W8_POPTR (GUANYLATE KINASE 1 family protein OS=Populus trichocarpa GN=POPTR_0006s05200g PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 5.2e-63 Identity = 128/176 (72.73%), Postives = 145/176 (82.39%), Query Frame = 1
BLAST of Cp4.1LG19g00530 vs. TrEMBL
Match: A9PAB6_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 1.5e-62 Identity = 127/176 (72.16%), Postives = 145/176 (82.39%), Query Frame = 1
BLAST of Cp4.1LG19g00530 vs. TrEMBL
Match: B9SUG2_RICCO (Guanylate kinase, putative OS=Ricinus communis GN=RCOM_0751830 PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 4.8e-61 Identity = 125/176 (71.02%), Postives = 144/176 (81.82%), Query Frame = 1
BLAST of Cp4.1LG19g00530 vs. TrEMBL
Match: A0A0B0MX82_GOSAR (Guanylate kinase OS=Gossypium arboreum GN=F383_29885 PE=4 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 2.4e-60 Identity = 123/170 (72.35%), Postives = 143/170 (84.12%), Query Frame = 1
BLAST of Cp4.1LG19g00530 vs. TAIR10
Match: AT3G57550.2 (AT3G57550.2 guanylate kinase) HSP 1 Score: 195.3 bits (495), Expect = 3.4e-50 Identity = 104/157 (66.24%), Postives = 120/157 (76.43%), Query Frame = 1
BLAST of Cp4.1LG19g00530 vs. TAIR10
Match: AT2G41880.1 (AT2G41880.1 guanylate kinase 1) HSP 1 Score: 191.8 bits (486), Expect = 3.8e-49 Identity = 105/157 (66.88%), Postives = 123/157 (78.34%), Query Frame = 1
BLAST of Cp4.1LG19g00530 vs. NCBI nr
Match: gi|778692226|ref|XP_004150465.2| (PREDICTED: guanylate kinase 2 [Cucumis sativus]) HSP 1 Score: 299.3 bits (765), Expect = 4.8e-78 Identity = 149/176 (84.66%), Postives = 165/176 (93.75%), Query Frame = 1
BLAST of Cp4.1LG19g00530 vs. NCBI nr
Match: gi|659121695|ref|XP_008460779.1| (PREDICTED: MAGUK p55 subfamily member 3-like [Cucumis melo]) HSP 1 Score: 295.4 bits (755), Expect = 6.9e-77 Identity = 148/176 (84.09%), Postives = 163/176 (92.61%), Query Frame = 1
BLAST of Cp4.1LG19g00530 vs. NCBI nr
Match: gi|224087031|ref|XP_002308036.1| (GUANYLATE KINASE 1 family protein [Populus trichocarpa]) HSP 1 Score: 248.8 bits (634), Expect = 7.4e-63 Identity = 128/176 (72.73%), Postives = 145/176 (82.39%), Query Frame = 1
BLAST of Cp4.1LG19g00530 vs. NCBI nr
Match: gi|743817110|ref|XP_011020343.1| (PREDICTED: guanylate kinase 2 [Populus euphratica]) HSP 1 Score: 248.8 bits (634), Expect = 7.4e-63 Identity = 129/176 (73.30%), Postives = 145/176 (82.39%), Query Frame = 1
BLAST of Cp4.1LG19g00530 vs. NCBI nr
Match: gi|118482805|gb|ABK93319.1| (unknown [Populus trichocarpa]) HSP 1 Score: 247.3 bits (630), Expect = 2.2e-62 Identity = 127/176 (72.16%), Postives = 145/176 (82.39%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|