Cp4.1LG19g00340 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG19g00340
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionEukaryotic translation initiation factor 3 subunit E
LocationCp4.1LG19 : 276521 .. 280288 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTTGTACGACCTAACTCCGCGAATCGCTCCAAATTTGGACCGTCATCTTGTTTTCCCTCTCCTCGAATTCCTTCAAGAGAGGCAGTTTTACCCTGACGAGCAGATCCTCAAGGCCAAAATCGAGCTTCTCAACAGGACCAATATGGTTGATTACGCCATGGACATTCACAAGTCGCTGTATCACACCGACGATGTTCCTCAAGGCATGGCCATCTCTTGGTTTTTTATTTTATTTTGTTACTTGTTTTTTGTATGTTGACGTGTTTGTGATGGGATTGGTGCAGACATGGTGGATAGAAGGGTGGAAGTGGTGGCGAGGCTTAAGGCTTTGGAGGAGTCCGCGGCGCCACTTGTTGCTTTTCTGCAGAATCCGGCTGCTGTTCAGGAACTGAGGGCTGATAAGCAGTACAATCTTCAAATGCTTAATGATCGTTATCAGGTACATTCATGGTCTCAGAATTACAATTTATTTTTTCTGTTGTACTTATGCCTTCTCTCCAATAAACAACGTTCAATTCTTTGTTCGGATGTAATATCATCTTGGTTGAAGCTCAGTGCTGCTATTTATGTTCTTTCTTTTATGTTCTAGCTCCTTTTGCATAAAGCTCTTGTTACATTTGATTGGTTTGGGGGTTCTTTAACTTTACATTTAGTATTGAGAGTGGTTATTGAATTAGCTTTTTGGGTTTCGTAAAAACCTATTTTCAGATTGGTCCAGATCAAATAGAAGCGTTATACCAATATGCCAAATTTCAGTTCGAGTGTGGGAACTACTCTGGTGCTGCTGACTATCTCTATCAGTACAGAGCCTTATGCACAGACAGTGAAAGGAGCCTGAGTGCTCTGTGGGGAAAATTGGCAGCTGAAATTTTAATGCAGAATTGGGATATTGCTGTCGAGGAGCTTAATCGTTTAAAAGAGATTATCGACTCCAAGGTGGGGTGACCTATCTAGCTCTTTTTATTTGTGTGTACAATACATGCCATCGCTCTACTGACTTTCTTTCTTGTGATGCCTAATGAAGAATTTCTCATCACCGATGAAACAAGTGCAAGGCAGAATATGGTTGATGCATTGGAGCCTCTTCATATTTTTCAATCACGACAATGGAAGAACACAGATAATTGACCTGTTTAATCAAGATAAGTAAGTCTACTGGGTCTTGTCTGTTTTCACTACTTTTTATTGATAATACATGTAGAAGTACTCTTCCCTGTTTTGATAAGTTAATTATCTGCAATTCTTAATTATGTGAAGACATCTTCTTAAAAAAAAAAGAAGTTCCTTTAGGGCTCATTTTGCTTGATTGGAGCCTCTTAAAAATAATGCTTCATATGTTCTCCATGATAAGGTCATGGAAGACAAAATGAAAAACATGCCCTTATGTAGATGAGATAATTGATGTGGATATTCATAATGAGGGCCCATGTCTAACAGTAAAACATGAAAATAAGTTTGTGACATGAATTAAGAATAGAGGATCCATCTGAGTGATGAGTTAATTCAGGCCTTTCCCTGTTGTTTTAATGAGGTGATACTTTTCTATTCTGTAGGTATTTAAATGCCATTCAAACCAATGCTCCCCATCTTTTACGCTATTTGGCCACTGCATTCATTGTTAACAAAAGGCGGCGGCCACAATTCAAAGATTTTATCAAGGTTATTCAGCAGGAACAATATTCCTATAATGATCCCATCACAGAGTTTTTGACTTGTGTGTATGTCAATTATGATTTCGATGGGGCACAAAAGAAGATGAGGGAGTGCGAAGAAGTAAGTTTCCTGATTCTTTTTTTCTTTACGAGTAATTAGAGAGTATATCCTTATTTCCAATGGTGCTTTTTGTTCATTGTTTAGAGGTGGTGTTCGGACGGTTTGGTTACAAAGTCTTAGCTGGTCGTGAACGATAAATGCTGTCAATTCTTAAAATTCTGTTGTGTTTTCAAGGCATAATTTACCACTTGTCCTCAATGTAGGTTATATTGAACGATCCTTTCCTAGGAAAGAGGCTTGAAGAAGGTAACCTTTCCACCGTTCCTTTGAGAGATGAGTTTTTGGAAACTGCTCGTCTTTTCGTCTTTGAGACTTTCTGCAGAATACATCAGCGTATTGATATGAGGTGCATACTTATTCATTCTCTCTTAAAAGTTGTTATCTACTGATAGTTATTTATTGGGTGAATAATGCTACTCTTTCCTTGTGTACGATAGAAAAGTGTATATCATGCAAGATTTTGGAGGGTCAAAATCCTGATGATAGCATTGAACATGCATTGAGCAATTAACATGCTTGTATATTTACACATTTTCTGTGACAATTGTGGAAACTAACGAATAGTAGCTAGCTGTGTAATCAAGAGAAAAGACTTTTGGCTTACCTTCTCAGCATTTTTAAACTTGTCTGTGGTTTCTACTCTACGAGTTTACAATACTCTCTCCTTTTTACTTTTTTTAGGAGCTTAAATTTGCAAACGGGTGTCAACAATATTCATTGGGAGTTTGAAATTTATATCATACAAATTGTATTGATTAGAACTGTAGATGAATTTTAAGATATCTAATTTGAGAAGCTCATCTTTGTTTCTTGTTTGTGTTTACCTCCTCTGTTCTCCATTCTTATCACTTGAAGATGGGATGGGTGGGAGCAAAAGAGGAAGAAAGGAGGTTTTACTCTAAGTTTGTAGTAAGATTGCCTTCAGCCAGTTAGTAACAGATCTGATTCTAAATCCTCTCTTTTAGTGCTGCTAAATAATGAGGTTCTCTAATGTATAAAGCTTGGTTCTCAGGATTTGGATTGGTAAAACAATACTTCCTGACCATTATTGTATATCTTCTGTCATTATAACTTGTGACTTTTCTTGGTTCATTTCGTTGTTATTATCTCAAGTGCTGGTAACTTGTGGCAGCGTCCTTGCTGAAAAGTTGAACTTGAATTATGAGGAAGCTGAGCGGTGGATTGTAAATCTCGTGCGCACGTCAAAGCTTGATGCAAAGCTTGATTCAAAGACAGGAACGGTTATAATGGAAACGAACGAGCCTGACGTGTAAGTTTATTTCCTTTGTTTTCTCAACCTTCCCCCACAGTCCGTCCTATATCTGTGAAATGTTTACAACTCTTAGATTACTGCCACAAAGTACTGTTCTTTTTAGTCAAATGAAATTTTGATCATTGAATTTTCAGGGTTGGGTCTGCTAGGCATTTGAAAAACTCTAGCCTTCGAACTTGTAATTGGACTTAGTTCTTAAACTTTGAGAAAAATTTCAAAATTTTGAAAGTTTACAAGGACCAAAACTTATAATTGGACTTAGTTTTGGCTCAATTATTTGAGGTTGTAGAACTTGTGGTAATAAATTGTTAATATGAAATTGACACGCTTCGTTTTCAGGCATGAGCAATTGATCGACCACACGAAGTCATTATCTGGGCGTACTTACAAGTTAGTGACCCAACTTCTAGAGCATGCACAGGCTCAAGCAGCTAGATAAATTTTGGGTGGTGCCTCTTTTTTTCCTGAATTTATGTTTTTTTTTTTTTTTTNTCACTATGAGATTAGAGCAAGATTTCCATATCTTTTCCCCCATAATTTATGCTAATTTTATGCTTCCATATTCTTATACCAATGATTATTCTAGAAAAATCTTAACAAAAATGTAAAGAATTTTTTTAATATACTAATTACTAATAAATGTTTTGTAATATTTATGTGGAGACCACCATTTCTCTCATTATTTTTATCTTAGTTCTGTTGATCCTACACTTTCGA

mRNA sequence

ATGGCGTTGTACGACCTAACTCCGCGAATCGCTCCAAATTTGGACCGTCATCTTGTTTTCCCTCTCCTCGAATTCCTTCAAGAGAGGCAGTTTTACCCTGACGAGCAGATCCTCAAGGCCAAAATCGAGCTTCTCAACAGGACCAATATGGTTGATTACGCCATGGACATTCACAAGTCGCTGTATCACACCGACGATGTTCCTCAAGGCATGGCCATCTCTTGGTTTTTTATTTTATTTTACATGGTGGATAGAAGGGTGGAAGTGGTGGCGAGGCTTAAGGCTTTGGAGGAGTCCGCGGCGCCACTTGTTGCTTTTCTGCAGAATCCGGCTGCTGTTCAGGAACTGAGGGCTGATAAGCAGTACAATCTTCAAATGCTTAATGATCGTTATCAGAATTTCTCATCACCGATGAAACAAGTGCAAGGCAGAATATGGTTGATGCATTGGAGCCTCTTCATATTTTTCAATCACGACAATGGAAGAACACAGATAATTGACCTGTTTAATCAAGATAAGTATTTAAATGCCATTCAAACCAATGCTCCCCATCTTTTACGCTATTTGGCCACTGCATTCATTGTTAACAAAAGGCGGCGGCCACAATTCAAAGATTTTATCAAGGTTATTCAGCAGGAACAATATTCCTATAATGATCCCATCACAGAGTTTTTGACTTGTGTGTATGTCAATTATGATTTCGATGGGGCACAAAAGAAGATGAGGGAGTGCGAAGAAGATTTGGATTGCGTCCTTGCTGAAAAGTTGAACTTGAATTATGAGGAAGCTGAGCGGTGGATTGTAAATCTCGTGCGCACGTCAAAGCTTGATGCAAAGCTTGATTCAAAGACAGGAACGGTTATAATGGAAACGAACGAGCCTGACGTGCATGAGCAATTGATCGACCACACGAAGTCATTATCTGGGCGTACTTACAAGTTAGTGACCCAACTTCTAGAGCATGCACAGGCTCAAGCAGCTAGATAAATTTTGGGTGGTGCCTCTTTTTTTCCTGAATTTATGTTTTTTTTTTTTTTTTNTCACTATGAGATTAGAGCAAGATTTCCATATCTTTTCCCCCATAATTTATGCTAATTTTATGCTTCCATATTCTTATACCAATGATTATTCTAGAAAAATCTTAACAAAAATGTAAAGAATTTTTTTAATATACTAATTACTAATAAATGTTTTGTAATATTTATGTGGAGACCACCATTTCTCTCATTATTTTTATCTTAGTTCTGTTGATCCTACACTTTCGA

Coding sequence (CDS)

ATGGCGTTGTACGACCTAACTCCGCGAATCGCTCCAAATTTGGACCGTCATCTTGTTTTCCCTCTCCTCGAATTCCTTCAAGAGAGGCAGTTTTACCCTGACGAGCAGATCCTCAAGGCCAAAATCGAGCTTCTCAACAGGACCAATATGGTTGATTACGCCATGGACATTCACAAGTCGCTGTATCACACCGACGATGTTCCTCAAGGCATGGCCATCTCTTGGTTTTTTATTTTATTTTACATGGTGGATAGAAGGGTGGAAGTGGTGGCGAGGCTTAAGGCTTTGGAGGAGTCCGCGGCGCCACTTGTTGCTTTTCTGCAGAATCCGGCTGCTGTTCAGGAACTGAGGGCTGATAAGCAGTACAATCTTCAAATGCTTAATGATCGTTATCAGAATTTCTCATCACCGATGAAACAAGTGCAAGGCAGAATATGGTTGATGCATTGGAGCCTCTTCATATTTTTCAATCACGACAATGGAAGAACACAGATAATTGACCTGTTTAATCAAGATAAGTATTTAAATGCCATTCAAACCAATGCTCCCCATCTTTTACGCTATTTGGCCACTGCATTCATTGTTAACAAAAGGCGGCGGCCACAATTCAAAGATTTTATCAAGGTTATTCAGCAGGAACAATATTCCTATAATGATCCCATCACAGAGTTTTTGACTTGTGTGTATGTCAATTATGATTTCGATGGGGCACAAAAGAAGATGAGGGAGTGCGAAGAAGATTTGGATTGCGTCCTTGCTGAAAAGTTGAACTTGAATTATGAGGAAGCTGAGCGGTGGATTGTAAATCTCGTGCGCACGTCAAAGCTTGATGCAAAGCTTGATTCAAAGACAGGAACGGTTATAATGGAAACGAACGAGCCTGACGTGCATGAGCAATTGATCGACCACACGAAGTCATTATCTGGGCGTACTTACAAGTTAGTGACCCAACTTCTAGAGCATGCACAGGCTCAAGCAGCTAGATAA

Protein sequence

MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKSLYHTDDVPQGMAISWFFILFYMVDRRVEVVARLKALEESAAPLVAFLQNPAAVQELRADKQYNLQMLNDRYQNFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYDFDGAQKKMRECEEDLDCVLAEKLNLNYEEAERWIVNLVRTSKLDAKLDSKTGTVIMETNEPDVHEQLIDHTKSLSGRTYKLVTQLLEHAQAQAAR
Homology
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BLAST of Cp4.1LG19g00340 vs. Swiss-Prot
Match: EIF3E_ARATH (Eukaryotic translation initiation factor 3 subunit E OS=Arabidopsis thaliana GN=TIF3E1 PE=1 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 9.9e-63
Identity = 136/241 (56.43%), Postives = 159/241 (65.98%), Query Frame = 1 

Query: 132 QNFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLAT 191
           ++FSSP+ QVQ RIWLMHW L+IFFNHDNGRTQIIDLFNQDKYLNAIQT+APHLLRYLAT
Sbjct: 201 KSFSSPLNQVQNRIWLMHWGLYIFFNHDNGRTQIIDLFNQDKYLNAIQTSAPHLLRYLAT 260

Query: 192 AFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYDFDGAQKKMRECEEDL--D 251
           AFIVNKRRRPQ K+FIKVIQQE YSY DPI EFL CV+VNYDFDGAQKKM+ECEE +  D
Sbjct: 261 AFIVNKRRRPQLKEFIKVIQQEHYSYKDPIIEFLACVFVNYDFDGAQKKMKECEEVIVND 320

Query: 252 CVLAEKL---NLN--------YEEAERWIVNL-----------VRTSKLDAKLDSKTGTV 311
             L +++   N +         E A  ++              V   KL+   +     +
Sbjct: 321 PFLGKRVEDGNFSTVPLRDEFLENARLFVFETYCKIHQRIDMGVLAEKLNLNYEEAERWI 380

Query: 312 I--METNEPDV------------------HEQLIDHTKSLSGRTYKLVTQLLEHAQAQAA 329
           +  + T++ D                   HEQLI+HTK LSGRTYKLV QLLEH QAQA 
Sbjct: 381 VNLIRTSKLDAKIDSESGTVIMEPTQPNVHEQLINHTKGLSGRTYKLVNQLLEHTQAQAT 440

[Close]
BLAST of Cp4.1LG19g00340 vs. Swiss-Prot
Match: EIF3E_NEMVE (Eukaryotic translation initiation factor 3 subunit E OS=Nematostella vectensis GN=v1g163572 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 5.8e-55
Identity = 118/228 (51.75%), Postives = 146/228 (64.04%), Query Frame = 1 

Query: 123 NLQMLNDRYQNFSSP--MKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLF-NQDKYLNAIQ 182
           +L  L D  ++ +S   ++ +Q R WL+HWSLF+FFNH  GR  IIDL   Q +YLNAIQ
Sbjct: 189 DLNRLKDVIESNTSAGTLQLLQERTWLIHWSLFVFFNHPKGRDLIIDLILYQPQYLNAIQ 248

Query: 183 TNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYDFDGAQK 242
           T  PH+LRYL TA I NKRRRP  KD +KVIQQE Y+Y DPITEFL C+YVN+DFDGAQK
Sbjct: 249 TMCPHILRYLTTAVITNKRRRPVLKDLVKVIQQESYTYRDPITEFLECLYVNFDFDGAQK 308

Query: 243 KMRECEEDL-----------------------------DCV----LAEKLNLNYEEAERW 302
           K+RECE  L                              C+    LAEKLN+  EEAERW
Sbjct: 309 KLRECETVLLNDFFLVACRDDFIENARLFIFETFCRIHQCISISMLAEKLNMTPEEAERW 368

Query: 303 IVNLVRTSKLDAKLDSKTGTVIMETNEPDVHEQLIDHTKSLSGRTYKL 315
           IVNL+R +KLDAK+DSK G V+M    P V++Q+I+ TK+L  +T  L
Sbjct: 369 IVNLIRNAKLDAKIDSKLGHVVMGVQAPSVYQQVIEKTKNLQYKTQVL 416

[Close]
BLAST of Cp4.1LG19g00340 vs. Swiss-Prot
Match: EIF3E_HUMAN (Eukaryotic translation initiation factor 3 subunit E OS=Homo sapiens GN=EIF3E PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 4.9e-54
Identity = 114/221 (51.58%), Postives = 142/221 (64.25%), Query Frame = 1 

Query: 135 SSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLF-NQDKYLNAIQTNAPHLLRYLATAF 194
           SSP++ +Q R WL+HWSLF+FFNH  GR  IIDLF  Q +YLNAIQT  PH+LRYL TA 
Sbjct: 202 SSPLQSLQQRTWLIHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAV 261

Query: 195 IVNK---RRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYDFDGAQKKMRECEEDL-- 254
           I NK   +RR   KD +KVIQQE Y+Y DPITEF+ C+YVN+DFDGAQKK+RECE  L  
Sbjct: 262 ITNKDVRKRRQVLKDLVKVIQQESYTYKDPITEFVECLYVNFDFDGAQKKLRECESVLVN 321

Query: 255 ---------------------------DCV----LAEKLNLNYEEAERWIVNLVRTSKLD 314
                                       C+    LA+KLN+  EEAERWIVNL+R ++LD
Sbjct: 322 DFFLVACLEDFIENARLFIFETFCRIHQCISINMLADKLNMTPEEAERWIVNLIRNARLD 381

Query: 315 AKLDSKTGTVIMETNEPDVHEQLIDHTKSLSGRTYKLVTQL 319
           AK+DSK G V+M  N    ++Q+I+ TKSLS R+  L   +
Sbjct: 382 AKIDSKLGHVVMGNNAVSPYQQVIEKTKSLSFRSQMLAMNI 422

[Close]
BLAST of Cp4.1LG19g00340 vs. Swiss-Prot
Match: EIF3E_MACFA (Eukaryotic translation initiation factor 3 subunit E OS=Macaca fascicularis GN=EIF3E PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 4.9e-54
Identity = 114/221 (51.58%), Postives = 142/221 (64.25%), Query Frame = 1 

Query: 135 SSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLF-NQDKYLNAIQTNAPHLLRYLATAF 194
           SSP++ +Q R WL+HWSLF+FFNH  GR  IIDLF  Q +YLNAIQT  PH+LRYL TA 
Sbjct: 202 SSPLQSLQQRTWLIHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAV 261

Query: 195 IVNK---RRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYDFDGAQKKMRECEEDL-- 254
           I NK   +RR   KD +KVIQQE Y+Y DPITEF+ C+YVN+DFDGAQKK+RECE  L  
Sbjct: 262 ITNKDVRKRRQVLKDLVKVIQQESYTYKDPITEFVECLYVNFDFDGAQKKLRECESVLVN 321

Query: 255 ---------------------------DCV----LAEKLNLNYEEAERWIVNLVRTSKLD 314
                                       C+    LA+KLN+  EEAERWIVNL+R ++LD
Sbjct: 322 DFFLVACLEDFIENARLFIFETFCRIHQCISINMLADKLNMTPEEAERWIVNLIRNARLD 381

Query: 315 AKLDSKTGTVIMETNEPDVHEQLIDHTKSLSGRTYKLVTQL 319
           AK+DSK G V+M  N    ++Q+I+ TKSLS R+  L   +
Sbjct: 382 AKIDSKLGHVVMGNNAVSPYQQVIEKTKSLSFRSQMLAMNI 422

[Close]
BLAST of Cp4.1LG19g00340 vs. Swiss-Prot
Match: EIF3E_MOUSE (Eukaryotic translation initiation factor 3 subunit E OS=Mus musculus GN=Eif3e PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 4.9e-54
Identity = 114/221 (51.58%), Postives = 142/221 (64.25%), Query Frame = 1 

Query: 135 SSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLF-NQDKYLNAIQTNAPHLLRYLATAF 194
           SSP++ +Q R WL+HWSLF+FFNH  GR  IIDLF  Q +YLNAIQT  PH+LRYL TA 
Sbjct: 202 SSPLQSLQQRTWLIHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAV 261

Query: 195 IVNK---RRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYDFDGAQKKMRECEEDL-- 254
           I NK   +RR   KD +KVIQQE Y+Y DPITEF+ C+YVN+DFDGAQKK+RECE  L  
Sbjct: 262 ITNKDVRKRRQVLKDLVKVIQQESYTYKDPITEFVECLYVNFDFDGAQKKLRECESVLVN 321

Query: 255 ---------------------------DCV----LAEKLNLNYEEAERWIVNLVRTSKLD 314
                                       C+    LA+KLN+  EEAERWIVNL+R ++LD
Sbjct: 322 DFFLVACLEDFIENARLFIFETFCRIHQCISINMLADKLNMTPEEAERWIVNLIRNARLD 381

Query: 315 AKLDSKTGTVIMETNEPDVHEQLIDHTKSLSGRTYKLVTQL 319
           AK+DSK G V+M  N    ++Q+I+ TKSLS R+  L   +
Sbjct: 382 AKIDSKLGHVVMGNNAVSPYQQVIEKTKSLSFRSQMLAMNI 422

[Close]
BLAST of Cp4.1LG19g00340 vs. TrEMBL
Match: A0A103XJU0_CYNCS (Eukaryotic translation initiation factor 3 subunit E OS=Cynara cardunculus var. scolymus GN=Ccrd_005970 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 5.8e-78
Identity = 153/202 (75.74%), Postives = 175/202 (86.63%), Query Frame = 1 

Query: 132 QNFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLAT 191
           QNFSS + QVQ RIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLAT
Sbjct: 282 QNFSSSLNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLAT 341

Query: 192 AFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYDFDGAQKKMRE----CEED 251
           AFIVNK+RRP FK+FIKVIQQEQ+S+ DPITEFL CVY  +  + A+  + E      E 
Sbjct: 342 AFIVNKKRRPLFKEFIKVIQQEQHSFADPITEFLACVYDEF-LENARLFIFETYCRIHER 401

Query: 252 LDC-VLAEKLNLNYEEAERWIVNLVRTSKLDAKLDSKTGTVIMETNEPDVHEQLIDHTKS 311
           ++  VLAEKLNLNYE+AERWI+NL+RTSKLDAK+D++TGTV+ME N P+V+EQLIDHTK 
Sbjct: 402 INMGVLAEKLNLNYEDAERWILNLIRTSKLDAKIDTQTGTVVMEPNHPNVYEQLIDHTKG 461

Query: 312 LSGRTYKLVTQLLEHAQAQAAR 329
           LSGRTYKLVTQLLE++Q QAAR
Sbjct: 462 LSGRTYKLVTQLLENSQPQAAR 482

[Close]
BLAST of Cp4.1LG19g00340 vs. TrEMBL
Match: A0A0E0HX29_ORYNI (Eukaryotic translation initiation factor 3 subunit E OS=Oryza nivara PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 7.6e-78
Identity = 181/384 (47.14%), Postives = 232/384 (60.42%), Query Frame = 1 

Query: 1   MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60
           MA +DLT R+A +LD HLV PLLEFLQER  YP+E+IL+AKI LL  TNMVDYAMDIHKS
Sbjct: 1   MAEHDLTARMAGHLDCHLVLPLLEFLQERHLYPEEEILEAKIRLLRGTNMVDYAMDIHKS 60

Query: 61  LYHTDDVPQGMAISWFFILFYMVDRRV-----EVVARLKALEESAAPLVAFLQNPAAVQE 120
            Y TDD+      + +    +  D  +     + + + +AL  +    ++ L    A + 
Sbjct: 61  RYGTDDIGPDQIETLYQCAKFQFDCGIYSFAAQYLHQYRALCTNIERSLSALWGKLAAEI 120

Query: 121 LRADKQYNLQMLNDRYQ-----NFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLFN 180
           L  +    L+ LN   +     NFSSP+ Q+Q RIWLMHWS+FIF+NH+NGR  IIDLF 
Sbjct: 121 LMQNWDVALEELNRLKEIIDSKNFSSPLNQLQNRIWLMHWSIFIFYNHENGRNGIIDLFF 180

Query: 181 QDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYV 240
           Q++YLNAIQTNAPHLLRYLATA +VNKRRR   K+ IKVIQQEQ+SY DPITEFL C++V
Sbjct: 181 QERYLNAIQTNAPHLLRYLATAVVVNKRRRNMLKELIKVIQQEQHSYKDPITEFLECLFV 240

Query: 241 NYDFDGAQKKMRECEEDL--DCVLAEKLNLN-----------YEEAERWIVNL------- 300
           NYDFDGAQ+K+ ECEE +  D  L +++               E A  +I          
Sbjct: 241 NYDFDGAQQKLIECEEVILNDPFLGKRIEEGNSITVPLRDEFLENARLFIFETYCRIHRS 300

Query: 301 ------------------------VRTSKLDAKLDSKTGTVIMETNEPDVHEQLIDHTKS 329
                                   VR SKLDAK+DS +GT+IM TN  ++HEQ I+  K+
Sbjct: 301 IDIGLLSQKLNMRYDEGELWIMNLVRNSKLDAKIDSVSGTLIMTTNHVNIHEQFIESLKN 360

[Close]
BLAST of Cp4.1LG19g00340 vs. TrEMBL
Match: A0A0J8CSR4_BETVU (Eukaryotic translation initiation factor 3 subunit E OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g062050 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.1e-76
Identity = 157/239 (65.69%), Postives = 174/239 (72.80%), Query Frame = 1 

Query: 134 FSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLATAF 193
           F+SP+ QVQ RIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLATAF
Sbjct: 199 FTSPLNQVQNRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLATAF 258

Query: 194 IVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYDF------------------- 253
           IVNKRRRPQFKDF+KVIQQEQ SY DPITEFL CVYVNYDF                   
Sbjct: 259 IVNKRRRPQFKDFVKVIQQEQNSYKDPITEFLACVYVNYDFEGAQKKLRECEEVILNDPF 318

Query: 254 ------DGAQKKMRECEEDLD------C-------------VLAEKLNLNYEEAERWIVN 313
                 +G+   +   +E L+      C             VLAEKLNL+YEEAERWI+ 
Sbjct: 319 LGKRVEEGSYTTVPLRDEFLENARLFICETYCKIHQRIDLGVLAEKLNLSYEEAERWIMT 378

Query: 314 LVRTSKLDAKLDSKTGTVIMETNEPDVHEQLIDHTKSLSGRTYKLVTQLLEHAQAQAAR 329
           L+RTSKLDAK+DSK GT++ME+N P+V+EQLIDHTK LSGRTYKLV QLLE  Q Q AR
Sbjct: 379 LIRTSKLDAKIDSKLGTIVMESNYPNVYEQLIDHTKGLSGRTYKLVGQLLEQGQPQVAR 437

[Close]
BLAST of Cp4.1LG19g00340 vs. TrEMBL
Match: G3NP77_GASAC (Eukaryotic translation initiation factor 3 subunit E OS=Gasterosteus aculeatus GN=eif3e PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 2.3e-74
Identity = 168/379 (44.33%), Postives = 230/379 (60.69%), Query Frame = 1 

Query: 1   MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60
           MA YDLT +IA  LDRHLVFPLLEFL  ++ Y ++++L  K++LL+ TNMVD+AMD+++S
Sbjct: 1   MAEYDLTTKIAHFLDRHLVFPLLEFLSVKEIYNEQELLHGKLDLLSETNMVDFAMDVYRS 60

Query: 61  LYHTDDVPQGMAISWFFILFYMVDRRVEVVARLKALEESAAPLV------------AFLQ 120
           LY   ++P  +            ++R EVVA+LK L+    P+V              L 
Sbjct: 61  LYSEKEIPHTLR-----------EKRTEVVAQLKQLQSETEPIVPATDRNALNSLWGKLA 120

Query: 121 NPAAVQELRADKQYNLQMLNDRYQNFS--SPMKQVQGRIWLMHWSLFIFFNHDNGRTQII 180
           +   +Q   A  + +L  L +   N S  SP++ +Q R WL+HWSLF+FFNH  GR  II
Sbjct: 121 SEILMQNWEAAME-DLTRLRETIDNNSVTSPLQALQQRTWLIHWSLFVFFNHPKGRDNII 180

Query: 181 DLF-NQDKYLNAIQTNAPHLLRYLATAFIVNK---RRRPQFKDFIKVIQQEQYSYNDPIT 240
           +LF  Q +YLNAIQT  PH+LRYL TA I NK   +RR   KD +KVIQQE Y+Y DPIT
Sbjct: 181 ELFLYQPQYLNAIQTMCPHILRYLTTAIITNKDVRKRRQVLKDLVKVIQQESYTYKDPIT 240

Query: 241 EFLTCVYVNYDFDGAQKKMRECEEDL-----------------------------DCV-- 300
           EF+ C+YVN+DFD AQKK+RECE  L                              C+  
Sbjct: 241 EFVECLYVNFDFDSAQKKLRECESVLVNDFFLVACLEDFIENARLFIFETFCRIHQCISI 300

Query: 301 --LAEKLNLNYEEAERWIVNLVRTSKLDAKLDSKTGTVIMETNEPDVHEQLIDHTKSLSG 329
             LA+KLN+  E+AERWIVNL+R ++LDAK+DSK G V+M  N    ++Q+I+ TKSLS 
Sbjct: 301 SMLADKLNMTPEDAERWIVNLIRNARLDAKIDSKLGHVVMGNNAISPYQQVIEKTKSLSF 360

[Close]
BLAST of Cp4.1LG19g00340 vs. TrEMBL
Match: V8NVR5_OPHHA (Eukaryotic translation initiation factor 3 subunit E OS=Ophiophagus hannah GN=EIF3E PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 4.0e-71
Identity = 168/372 (45.16%), Postives = 221/372 (59.41%), Query Frame = 1 

Query: 1   MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60
           MA YDLT RIA  LDRHLVFPLLEFL  +  Y ++++L+ K+ELL+ TNMVD+AMD++++
Sbjct: 1   MAEYDLTNRIANFLDRHLVFPLLEFLSVKGIYNEKELLQGKLELLDDTNMVDFAMDVYRN 60

Query: 61  LYHTDDVPQGMAISWFFILFYMVDRRVEVVARLKALEE---------------SAAPLVA 120
           LY +DD+PQGM    +    Y   +         A  E               + + L  
Sbjct: 61  LY-SDDIPQGMVGQEYLDSLYRFAKFQYKCGNYTAASEYLYLFRVLVPSTDRNALSSLWG 120

Query: 121 FLQNPAAVQELRADKQYNLQMLNDRYQN--FSSPMKQVQGRIWLMHWSLFIFFNHDNGRT 180
            L +   +Q+  A  + +L  L +   N   SSP++ +Q R WL+HWSLF+FFNH  GR 
Sbjct: 121 KLASGILMQDWDAAME-DLTRLKETIDNSSVSSPLQALQQRTWLIHWSLFVFFNHIKGRD 180

Query: 181 QIIDLF-NQDKYLNAIQTNAPHLLRYLATAFIVNK---RRRPQFKDFIKVIQQEQYSYND 240
            IIDLF  Q +Y+NAIQT  PH+LRYL TA I NK   +RR   KD +KVIQQE Y+Y D
Sbjct: 181 NIIDLFLYQPQYINAIQTMCPHILRYLTTAVITNKDVRKRRQVLKDLVKVIQQESYTYKD 240

Query: 241 PITEFLTCVYVNYDFDGAQKKMRECE-------------EDL----------------DC 300
           PITEF+ C+YVN DFDGAQKK+RECE             ED                  C
Sbjct: 241 PITEFVECLYVNVDFDGAQKKLRECELVLVNDFFLVACLEDFIENARLFVFETFCRIHQC 300

Query: 301 V----LAEKLNLNYEEAERWIVNLVRTSKLDAKLDSKTGTVIMETNEPDVHEQLIDHTKS 319
           +    LA+KLN+  EEAERWIVNL+R ++LDAK+DSK G V+M  N    ++Q+I+ TKS
Sbjct: 301 ISINMLADKLNMTPEEAERWIVNLIRNARLDAKIDSKLGHVVMGNNAVSPYQQVIEKTKS 360

[Close]
BLAST of Cp4.1LG19g00340 vs. TAIR10
Match: AT3G57290.1 (AT3G57290.1 eukaryotic translation initiation factor 3E)

HSP 1 Score: 241.9 bits (616), Expect = 5.6e-64
Identity = 136/241 (56.43%), Postives = 159/241 (65.98%), Query Frame = 1 

Query: 132 QNFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLAT 191
           ++FSSP+ QVQ RIWLMHW L+IFFNHDNGRTQIIDLFNQDKYLNAIQT+APHLLRYLAT
Sbjct: 201 KSFSSPLNQVQNRIWLMHWGLYIFFNHDNGRTQIIDLFNQDKYLNAIQTSAPHLLRYLAT 260

Query: 192 AFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYDFDGAQKKMRECEEDL--D 251
           AFIVNKRRRPQ K+FIKVIQQE YSY DPI EFL CV+VNYDFDGAQKKM+ECEE +  D
Sbjct: 261 AFIVNKRRRPQLKEFIKVIQQEHYSYKDPIIEFLACVFVNYDFDGAQKKMKECEEVIVND 320

Query: 252 CVLAEKL---NLN--------YEEAERWIVNL-----------VRTSKLDAKLDSKTGTV 311
             L +++   N +         E A  ++              V   KL+   +     +
Sbjct: 321 PFLGKRVEDGNFSTVPLRDEFLENARLFVFETYCKIHQRIDMGVLAEKLNLNYEEAERWI 380

Query: 312 I--METNEPDV------------------HEQLIDHTKSLSGRTYKLVTQLLEHAQAQAA 329
           +  + T++ D                   HEQLI+HTK LSGRTYKLV QLLEH QAQA 
Sbjct: 381 VNLIRTSKLDAKIDSESGTVIMEPTQPNVHEQLINHTKGLSGRTYKLVNQLLEHTQAQAT 440

[Close]
BLAST of Cp4.1LG19g00340 vs. NCBI nr
Match: gi|698466364|ref|XP_009782891.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit E [Nicotiana sylvestris])

HSP 1 Score: 305.4 bits (781), Expect = 1.2e-79
Identity = 162/241 (67.22%), Postives = 182/241 (75.52%), Query Frame = 1 

Query: 132 QNFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLAT 191
           ++FS+P+ QVQ RIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQT+APHLLRYLAT
Sbjct: 198 KSFSTPLNQVQNRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTSAPHLLRYLAT 257

Query: 192 AFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYDF----------------- 251
           AFIVNKRRRPQFKDFIKVIQQEQYS  DPITEFL C+YVNYDF                 
Sbjct: 258 AFIVNKRRRPQFKDFIKVIQQEQYSCKDPITEFLACIYVNYDFDGAQKKMKECEEVILND 317

Query: 252 --------DGAQKKMRECEEDLD----------C---------VLAEKLNLNYEEAERWI 311
                   +G+   +   +E L+          C         VLAEKLNLNYEEAERWI
Sbjct: 318 PFLGKRVEEGSFSSVPLRDEFLENARLFISETYCRIHQRVDMGVLAEKLNLNYEEAERWI 377

Query: 312 VNLVRTSKLDAKLDSKTGTVIMETNEPDVHEQLIDHTKSLSGRTYKLVTQLLEHAQAQAA 329
           VNL+RTSKLDAK+DS++GTVIME  +P+V+EQLIDHTK+LSGRTYKLV+QLLEHAQ QAA
Sbjct: 378 VNLIRTSKLDAKIDSESGTVIMEPTQPNVYEQLIDHTKALSGRTYKLVSQLLEHAQTQAA 437

[Close]
BLAST of Cp4.1LG19g00340 vs. NCBI nr
Match: gi|697093851|ref|XP_009630704.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit E {ECO:0000255|HAMAP-Rule:MF_03004} [Nicotiana tomentosiformis])

HSP 1 Score: 305.4 bits (781), Expect = 1.2e-79
Identity = 162/241 (67.22%), Postives = 182/241 (75.52%), Query Frame = 1 

Query: 132 QNFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLAT 191
           ++FS+P+ QVQ RIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQT+APHLLRYLAT
Sbjct: 198 KSFSTPLNQVQNRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTSAPHLLRYLAT 257

Query: 192 AFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYDF----------------- 251
           AFIVNKRRRPQFKDFIKVIQQEQYS  DPITEFL C+YVNYDF                 
Sbjct: 258 AFIVNKRRRPQFKDFIKVIQQEQYSCKDPITEFLACIYVNYDFDGAQKKMKECEEVILND 317

Query: 252 --------DGAQKKMRECEEDLD----------C---------VLAEKLNLNYEEAERWI 311
                   +G+   +   +E L+          C         VLAEKLNLNYEEAERWI
Sbjct: 318 PFLGKRVEEGSFSSVPLRDEFLENARLFISETYCRIHQRVDMGVLAEKLNLNYEEAERWI 377

Query: 312 VNLVRTSKLDAKLDSKTGTVIMETNEPDVHEQLIDHTKSLSGRTYKLVTQLLEHAQAQAA 329
           VNL+RTSKLDAK+DS++GTVIME  +P+V+EQLIDHTK+LSGRTYKLV+QLLEHAQ QAA
Sbjct: 378 VNLIRTSKLDAKIDSQSGTVIMEPTQPNVYEQLIDHTKALSGRTYKLVSQLLEHAQTQAA 437

[Close]
BLAST of Cp4.1LG19g00340 vs. NCBI nr
Match: gi|976904283|gb|KVH92008.1| (Eukaryotic translation initiation factor 3 (eIF3), subunit 6, N-terminal [Cynara cardunculus var. scolymus])

HSP 1 Score: 299.3 bits (765), Expect = 8.3e-78
Identity = 153/202 (75.74%), Postives = 175/202 (86.63%), Query Frame = 1 

Query: 132 QNFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLAT 191
           QNFSS + QVQ RIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLAT
Sbjct: 282 QNFSSSLNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLAT 341

Query: 192 AFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYDFDGAQKKMRE----CEED 251
           AFIVNK+RRP FK+FIKVIQQEQ+S+ DPITEFL CVY  +  + A+  + E      E 
Sbjct: 342 AFIVNKKRRPLFKEFIKVIQQEQHSFADPITEFLACVYDEF-LENARLFIFETYCRIHER 401

Query: 252 LDC-VLAEKLNLNYEEAERWIVNLVRTSKLDAKLDSKTGTVIMETNEPDVHEQLIDHTKS 311
           ++  VLAEKLNLNYE+AERWI+NL+RTSKLDAK+D++TGTV+ME N P+V+EQLIDHTK 
Sbjct: 402 INMGVLAEKLNLNYEDAERWILNLIRTSKLDAKIDTQTGTVVMEPNHPNVYEQLIDHTKG 461

Query: 312 LSGRTYKLVTQLLEHAQAQAAR 329
           LSGRTYKLVTQLLE++Q QAAR
Sbjct: 462 LSGRTYKLVTQLLENSQPQAAR 482

[Close]
BLAST of Cp4.1LG19g00340 vs. NCBI nr
Match: gi|731324331|ref|XP_010672915.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit E [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 295.0 bits (754), Expect = 1.6e-76
Identity = 157/239 (65.69%), Postives = 174/239 (72.80%), Query Frame = 1 

Query: 134 FSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLATAF 193
           F+SP+ QVQ RIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLATAF
Sbjct: 199 FTSPLNQVQNRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLATAF 258

Query: 194 IVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYDF------------------- 253
           IVNKRRRPQFKDF+KVIQQEQ SY DPITEFL CVYVNYDF                   
Sbjct: 259 IVNKRRRPQFKDFVKVIQQEQNSYKDPITEFLACVYVNYDFEGAQKKLRECEEVILNDPF 318

Query: 254 ------DGAQKKMRECEEDLD------C-------------VLAEKLNLNYEEAERWIVN 313
                 +G+   +   +E L+      C             VLAEKLNL+YEEAERWI+ 
Sbjct: 319 LGKRVEEGSYTTVPLRDEFLENARLFICETYCKIHQRIDLGVLAEKLNLSYEEAERWIMT 378

Query: 314 LVRTSKLDAKLDSKTGTVIMETNEPDVHEQLIDHTKSLSGRTYKLVTQLLEHAQAQAAR 329
           L+RTSKLDAK+DSK GT++ME+N P+V+EQLIDHTK LSGRTYKLV QLLE  Q Q AR
Sbjct: 379 LIRTSKLDAKIDSKLGTIVMESNYPNVYEQLIDHTKGLSGRTYKLVGQLLEQGQPQVAR 437

[Close]
BLAST of Cp4.1LG19g00340 vs. NCBI nr
Match: gi|6735308|emb|CAB68135.1| (translation initiation factor 3-like protein [Arabidopsis thaliana])

HSP 1 Score: 294.7 bits (753), Expect = 2.0e-76
Identity = 197/422 (46.68%), Postives = 236/422 (55.92%), Query Frame = 1 

Query: 4   YDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKSLYH 63
           YDLTP IAPNLDRHLVFP+ EFLQERQ YPDEQILK+KI+LLN+TNMVDYAMDIHKSLYH
Sbjct: 8   YDLTPLIAPNLDRHLVFPIFEFLQERQLYPDEQILKSKIQLLNQTNMVDYAMDIHKSLYH 67

Query: 64  TDDVPQGMAISWFFILFYMVDRRVEVVARLKALEESAAPLVAFLQNP------------- 123
           T+D PQ M           V+RR EVVARLK+LEE+AAPLV+FL NP             
Sbjct: 68  TEDAPQEM-----------VERRTEVVARLKSLEEAAAPLVSFLLNPNAVQELRADKQYN 127

Query: 124 ---------AAVQELRADKQY--------NLQMLND---RYQNFSSPMKQVQGRIWLMHW 183
                        ++ A  QY        N     D   +Y+   S +++    +W    
Sbjct: 128 LQMLKERYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRTLCSNLERSLSALWGKLA 187

Query: 184 SLFIFFNHD------NGRTQIID--------------LFNQDKYLNAIQTNAPHLLRYLA 243
           S  +  N D      N   +IID              L +   YLNAIQT+APHLLRYLA
Sbjct: 188 SEILMQNWDIALEELNRLKEIIDSKFFIAVKPGAEQDLVDALGYLNAIQTSAPHLLRYLA 247

Query: 244 TAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYDFDGAQKKMRECEEDL-- 303
           TAFIVNKRRRPQ K+FIKVIQQE YSY DPI EFL CV+VNYDFDGAQKKM+ECEE +  
Sbjct: 248 TAFIVNKRRRPQLKEFIKVIQQEHYSYKDPIIEFLACVFVNYDFDGAQKKMKECEEVIVN 307

Query: 304 DCVLAEKL---NLN--------YEEAERWIVNL-----------VRTSKLDAKLDSKTGT 329
           D  L +++   N +         E A  ++              V   KL+   +     
Sbjct: 308 DPFLGKRVEDGNFSTVPLRDEFLENARLFVFETYCKIHQRIDMGVLAEKLNLNYEEAERW 367

The following BLAST results are available for this feature:
BLAST of Cp4.1LG19g00340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EIF3E_ARATH9.9e-6356.43Eukaryotic translation initiation factor 3 subunit E OS=Arabidopsis thaliana GN=... [more]
EIF3E_NEMVE5.8e-5551.75Eukaryotic translation initiation factor 3 subunit E OS=Nematostella vectensis G... [more]
EIF3E_HUMAN4.9e-5451.58Eukaryotic translation initiation factor 3 subunit E OS=Homo sapiens GN=EIF3E PE... [more]
EIF3E_MACFA4.9e-5451.58Eukaryotic translation initiation factor 3 subunit E OS=Macaca fascicularis GN=E... [more]
EIF3E_MOUSE4.9e-5451.58Eukaryotic translation initiation factor 3 subunit E OS=Mus musculus GN=Eif3e PE... [more]
BLAST of Cp4.1LG19g00340 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A103XJU0_CYNCS5.8e-7875.74Eukaryotic translation initiation factor 3 subunit E OS=Cynara cardunculus var. ... [more]
A0A0E0HX29_ORYNI7.6e-7847.14Eukaryotic translation initiation factor 3 subunit E OS=Oryza nivara PE=3 SV=1[more]
A0A0J8CSR4_BETVU1.1e-7665.69Eukaryotic translation initiation factor 3 subunit E OS=Beta vulgaris subsp. vul... [more]
G3NP77_GASAC2.3e-7444.33Eukaryotic translation initiation factor 3 subunit E OS=Gasterosteus aculeatus G... [more]
V8NVR5_OPHHA4.0e-7145.16Eukaryotic translation initiation factor 3 subunit E OS=Ophiophagus hannah GN=EI... [more]
BLAST of Cp4.1LG19g00340 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G57290.15.6e-6456.43 eukaryotic translation initiation factor 3E[more]
BLAST of Cp4.1LG19g00340 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|698466364|ref|XP_009782891.1|1.2e-7967.22PREDICTED: eukaryotic translation initiation factor 3 subunit E [Nicotiana sylve... [more]
gi|697093851|ref|XP_009630704.1|1.2e-7967.22PREDICTED: eukaryotic translation initiation factor 3 subunit E {ECO:0000255|HAM... [more]
gi|976904283|gb|KVH92008.1|8.3e-7875.74Eukaryotic translation initiation factor 3 (eIF3), subunit 6, N-terminal [Cynara... [more]
gi|731324331|ref|XP_010672915.1|1.6e-7665.69PREDICTED: eukaryotic translation initiation factor 3 subunit E [Beta vulgaris s... [more]
gi|6735308|emb|CAB68135.1|2.0e-7646.68translation initiation factor 3-like protein [Arabidopsis thaliana][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR019010eIF3e_N
IPR016650eIF3e
IPR011991Winged helix-turn-helix DNA-binding domain
IPR000717PCI_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006446 regulation of translational initiation
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0005840 ribosome
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005515 protein binding
molecular_function GO:0003743 translation initiation factor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g00340.1Cp4.1LG19g00340.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 252..290
score: 2.
IPR011991Winged helix-turn-helix DNA-binding domainGENE3DG3DSA:1.10.10.10coord: 252..294
score: 8.
IPR011991Winged helix-turn-helix DNA-binding domainunknownSSF46785"Winged helix" DNA-binding domaincoord: 252..294
score: 1.6
IPR016650Eukaryotic translation initiation factor 3 subunit EPANTHERPTHR10317EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Ecoord: 2..328
score: 1.1E
IPR019010Eukaryotic translation initiation factor 3 subunit E, N-terminalPFAMPF09440eIF3_Ncoord: 5..132
score: 2.8
IPR019010Eukaryotic translation initiation factor 3 subunit E, N-terminalSMARTSM01186eIF3_N_2coord: 5..135
score: 6.5
NoneNo IPR availableunknownCoilCoilcoord: 234..254
scor

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG19g00340Cucurbita pepo (Zucchini)cpecpeB079
Cp4.1LG19g00340Cucurbita pepo (Zucchini)cpecpeB085
Cp4.1LG19g00340Cucumber (Gy14) v1cgycpeB0695
Cp4.1LG19g00340Cucurbita maxima (Rimu)cmacpeB669
Cp4.1LG19g00340Cucurbita maxima (Rimu)cmacpeB880
Cp4.1LG19g00340Cucurbita moschata (Rifu)cmocpeB620
Cp4.1LG19g00340Cucurbita moschata (Rifu)cmocpeB817
Cp4.1LG19g00340Wild cucumber (PI 183967)cpecpiB502
Cp4.1LG19g00340Cucumber (Chinese Long) v2cpecuB501
Cp4.1LG19g00340Cucumber (Chinese Long) v2cpecuB502
Cp4.1LG19g00340Bottle gourd (USVL1VR-Ls)cpelsiB392
Cp4.1LG19g00340Bottle gourd (USVL1VR-Ls)cpelsiB401
Cp4.1LG19g00340Watermelon (Charleston Gray)cpewcgB437
Cp4.1LG19g00340Watermelon (97103) v1cpewmB488
Cp4.1LG19g00340Melon (DHL92) v3.5.1cpemeB454
Cp4.1LG19g00340Cucumber (Gy14) v2cgybcpeB535
Cp4.1LG19g00340Melon (DHL92) v3.6.1cpemedB546
Cp4.1LG19g00340Melon (DHL92) v3.6.1cpemedB538
Cp4.1LG19g00340Silver-seed gourdcarcpeB0668
Cp4.1LG19g00340Silver-seed gourdcarcpeB0744
Cp4.1LG19g00340Cucumber (Chinese Long) v3cpecucB0615
Cp4.1LG19g00340Wax gourdcpewgoB0613
Cp4.1LG19g00340Wax gourdcpewgoB0617