Cp4.1LG18g06180 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGGACGTAACTTGGGGAGATGGTCGAGGACAAATCATGGACAATGCCAATCTCCTTGCGCTGTCTCTTGATAAAGCTTCTGGATCAGGCTTCCAGTCCAAGAATCAATATCTCTTTGGCAGGTTTGATATCAAAATTAAACTTGTACCTGGCAACTCAGCTGGCACAGTCACGGCCTATTATGTAAGAACAACCCTCTCTATTGTTGTTTTTATTCCATTACGATGTCGTTTGAATTAACCACGTCGATTTTTGTGTGTATGTTTTATTGTAGTTGCGTTCACAAGAGTCGTTGTGGGATGAGATAGACTTCGAGTTCCTTGGAAACTTGAGTGGCCAACCTTATATTGTGCATACCAATGTTTATATACAAGGACAGGGTGATAGGGAGCAACAATTCTACCTTTGGTTTGATCCGACTGCTGATTTTCACACCTACTCCTTCCTCTGGAATCCTACTCATGTAGTGTAAGTTCACTCTCGTGCACCATTTCTTGTTGATAGTCTCATTACTGTTATTTTCTGATAAGTGGAGACGTTGGCTAATTTAGGAAATAATCATGAGTTTATAAGTAAGCAATAATCTCCATTGATACGAGGTCTCATGAGAGTTAATGCTCAAAATGAACAATATCGTATTATTGTAGAGAGTTGTGGTTCTTATCAAAGTGGACAATATCATATCATTGTAGAGAGCTGTGGTTTCTGTTGGATGATAGAAGTCACACAGCTAATTTAAGGAATGATCCTGGGTTTATAAGTGAGGAATACTAACTTAATTGATATGAGGACTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGATTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTATAATAGTTTCTACTTCTCTTTTATTGTACATGACTGTAGCCAATATTTCTCCCTCCTTTTCTGTGTTTAATTATTTGTGTTCGTCTAGATTGAGTGTGTGCACTGTTATGGGGTATGGTGTTAGGTGGTACGTGGATGGGAGGCCAATAAGGGAGTTCAAGAACATGGAAACCAAGGGGGTGCCATATCCAAAGAAACAGGCAATGAGGCTATACGCGAGCTTATGGGACGCGGAGGAGTGGGCGACAAGAGGAGGGCTAGTGAAAACGGACTGGACCAAAGCACCCTTCACGGCTTCCTTCAGGAGCTACAATGCCAATGGATGTGTGTGGAGCGATGCAGCGTCGTGGTGTGGCCAGAACTCGACGCCGTGGCTATCGGAGGCGCTTGATTCAGGCAGCCAGAAAGTGCTGCGATGGGTTCGGAAGAAGTATATGATTTATGATTACTGCACTGATCAAATGAGATTCCCTCAAGGCCTTCCTCGGGAGTGCCCTGTCCGCACCAACCCATAGACTATGGTTGCATGCCTATGACAAGCCAAAACTTTTATGTCTTTTCATGTTCTAATATTTTACTTTTGTATTTTTAGGAAGCATGACGTTTTGAAAAAATCATGTCTTAAGCCTGACATACATGAAATGCCCTAGCACTAGTTGTCAACTTCTCATTCCCAAAAATTATATATTATGAGCAGTTGTTGTTACTCTCTTGCTTGCATATATAACGTATCTTTCAAAATCTCTCTCTACCCTCATTTTCTAAAACCTTCTTCTTAAATCGAGGTCAGAGGCTCGAGCATACGTCGCTTGCCTGTAGGTGACATAAGAACGAATTGGATTAGCTCACTTGTCGTTGGAAAGTGAGTGCCGCACAATCGCAAGTCCGCTACTATCAAGAGTGCGATTGTGACAAGTGATATCATAGCTTTGTTAGCACAGTAACATAGAAAAGACCGAAACGTCGTACTTCCTATAAATACAAAAGTAAAATACTAGAACATGGAAAGATATAAAGAGCTTGACTTATCATGGGTATACGGCTATGAGAAACACGCCTTGAACGAGCATGACCGTAACACGCACTAGCGCGGGAGATGGTGCACATTACAAAAGCAAACAAAGAAACACCGAAGACGGTGGTTCAGAGGAACCCGCGTAAGAAGCTTCATCTACTATCCTCTACCTGCATCTCCAGCTGGATCCCATATTCACCGTCCCATCCCTTATTATTATTATATTATTTCTTTCTTCAATATTTTAAAATTTAAAATTTAAACTATATTATATTCTCCACTTTTATTCTAGAAATGTATTTTCAAATATATATATATATATAAACAAAAGTATATTGATTTATTATTTACCAACATTATATTGAAAAATAATTTTTTTAAAATAACTCTATTCAAAAATAATAATAATAATAGAGGATAAATTATTCAAAGAATTTAATCTTTAAATTACTCGTCAGAAATCTAGGTTTAAATTTTTGTAAAAATAAATGAAGAATTTCATGGAGATAAAACAGAAAAGACTTTTCCATCTTCACTCAAACTAATTGGAAGACGCTACAAACAATTGAATCAATACACAGCTGTCAAATTAAGCCACTTTTCTAAATTCAATTTTATTTTGGAAGACTATTTTCTGTCCTTCCTAATCTATCATGTTTACACCTTGAATTAAAAAAAAAAAAAAAAAATCAATTTTGCATTTAATAAGTTATTAATTTTAAAAAAATATATATATATATATATAAATGGATTTATTAAGCATTTAAGGAAAATTAATATTGTGACATAAAATTTGTATGGTGTGATCGTGGTGGAGTGGAGGAGGCGGTGCGAACCGCGTAGCAGGCTTTATGCGTTAGGATGATTCCCCAAACCCAACCATCTCCAGCTGTACGCAGCATTCCAATGAACCTTCTCCGCGTTTGCCTTTCCCATTGGCCGCCTTCCTCATCCCTCGCTATATATAACCCCCTGCTTCCTTCTTCCCTCTTCATCTCACACTGCAATTCCAAATCAACCAACATGGCCTCATCCACTGCTTTCCTGCTTCCTCTACTATTCGCCGCCGCCTCCCTCCTTTCCTCTGCCGCTGCTAATTTCCACCAATCAACCGATATTACCTGGGGAGATGGCCGCGCTCAGATTCTCAACAATGGCGACCTTCTTTCTCTGTCCCTCGACAGAGCCTCTGGCTCTGGCTTCCGCTCCAGGAATGAGTATTTATATGGGAAAATCGATATGCAAATCAAGCTCGTTCCTGGCAACTCTGCCGGCACTGTCACTGCCTACTACGTACGTTTTACACTTTGAATCTTCTTTTACAGTGGATGCTCGCTCATTCCGATTCTTACATTCGTCTTTGTTTTATGAATTTGCAGTTGCGCTCAGAAGGGTCTGCGTGGGACGAAATCGATTTCGAGTTTTTGGGGAATCTGAGCGGCGATCCTTACACTGTTCACACCAATGTGTTCAGCCAGGGGAAGGGCAACAGAGAGCAGCAGTTCCATCTCTGGTTCGACCCAACTGCTGATTTCCACACCTATTCAATTCTCTGGAATCCCCAGCGCATTGTGTAAGCACTCTAAATTCAATTATCCACTCCAACCAAAAGTGTGAATTGTAATCGCAATTGAAATTGAAATTTGCTCTGTTTTTGCTTTACAGCTTCTACGTGGACGGCACACCCATTAGAGAGTTCAAGAACCAGGAGTCAATTGGCGTTGCATTCCCCAAAAATCAGCCCATGAGGCTTCAATCCAGTCTCTGGAACGCCGATGATTGGGCAACCAGAGGTGGGTTAGTGAAGACCGATTGGACTCAGGCTCCATTCACCGCATCTTACAGAAACTTCAATGAAAACGCTTGCATTTGGTCATCGGGACAGTCGTCTTGTGGGTCGAATTCGCAGCCGACCTCCGACGACAAGTCGTGGTTCTCTCAGGAACTGGATTCCGACAGCCAAGGAAGGATGAACTGGGTCCAAAAGAACTACATGATCTACAATTACTGCACCGATATTAAGCGATTTCCTCAGGGCATGCCTCCCGAATGCAATGCCACTGCC TGGACGTAACTTGGGGAGATGGTCGAGGACAAATCATGGACAATGCCAATCTCCTTGCGCTGTCTCTTGATAAAGCTTCTGGATCAGGCTTCCAGTCCAAGAATCAATATCTCTTTGGCAGGTTTGATATCAAAATTAAACTTGTACCTGGCAACTCAGCTGGCACAGTCACGGCCTATTATTTGCGTTCACAAGAGTCGTTGTGGGATGAGATAGACTTCGAGTTCCTTGGAAACTTGAGTGGCCAACCTTATATTGTGCATACCAATGTTTATATACAAGGACAGGGTGATAGGGAGCAACAATTCTACCTTTGGTTTGATCCGACTGCTGATTTTCACACCTACTCCTTCCTCTGGAATCCTACTCATGCAATGAGGCTATACGCGAGCTTATGGGACGCGGAGGAGTGGGCGACAAGAGGAGGGCTAGTGAAAACGGACTGGACCAAAGCACCCTTCACGGCTTCCTTCAGGAGCTACAATGCCAATGGATGTGTGTGGAGCGATGCAGCGTCGTGGTGTGGCCAGAACTCGACGCCGTGGCTATCGGAGGCGCTTGATTCAGGCAGCCAGAAAGTGCTGCGATGGATTCTCAACAATGGCGACCTTCTTTCTCTGTCCCTCGACAGAGCCTCTGGCTCTGGCTTCCGCTCCAGGAATGAGTATTTATATGGGAAAATCGATATGCAAATCAAGCTCGTTCCTGGCAACTCTGCCGGCACTGTCACTGCCTACTACTTGCGCTCAGAAGGGTCTGCGTGGGACGAAATCGATTTCGAGTTTTTGGGGAATCTGAGCGGCGATCCTTACACTGTTCACACCAATGTGTTCAGCCAGGGGAAGGGCAACAGAGAGCAGCAGTTCCATCTCTGGTTCGACCCAACTGCTGATTTCCACACCTATTCAATTCTCTGGAATCCCCAGCGCATTGTCTTCTACGTGGACGGCACACCCATTAGAGAGTTCAAGAACCAGGAGTCAATTGGCGTTGCATTCCCCAAAAATCAGCCCATGAGGCTTCAATCCAGTCTCTGGAACGCCGATGATTGGGCAACCAGAGGTGGGTTAGTGAAGACCGATTGGACTCAGGCTCCATTCACCGCATCTTACAGAAACTTCAATGAAAACGCTTGCATTTGGTCATCGGGACAGTCGTCTTGTGGGTCGAATTCGCAGCCGACCTCCGACGACAAGTCGTGGTTCTCTCAGGAACTGGATTCCGACAGCCAAGGAAGGATGAACTGGGTCCAAAAGAACTACATGATCTACAATTACTGCACCGATATTAAGCGATTTCCTCAGGGCATGCCTCCCGAATGCAATGCCACTGCC ATGGACAATGCCAATCTCCTTGCGCTGTCTCTTGATAAAGCTTCTGGATCAGGCTTCCAGTCCAAGAATCAATATCTCTTTGGCAGGTTTGATATCAAAATTAAACTTGTACCTGGCAACTCAGCTGGCACAGTCACGGCCTATTATTTGCGTTCACAAGAGTCGTTGTGGGATGAGATAGACTTCGAGTTCCTTGGAAACTTGAGTGGCCAACCTTATATTGTGCATACCAATGTTTATATACAAGGACAGGGTGATAGGGAGCAACAATTCTACCTTTGGTTTGATCCGACTGCTGATTTTCACACCTACTCCTTCCTCTGGAATCCTACTCATGCAATGAGGCTATACGCGAGCTTATGGGACGCGGAGGAGTGGGCGACAAGAGGAGGGCTAGTGAAAACGGACTGGACCAAAGCACCCTTCACGGCTTCCTTCAGGAGCTACAATGCCAATGGATGTGTGTGGAGCGATGCAGCGTCGTGGTGTGGCCAGAACTCGACGCCGTGGCTATCGGAGGCGCTTGATTCAGGCAGCCAGAAAGTGCTGCGATGGATTCTCAACAATGGCGACCTTCTTTCTCTGTCCCTCGACAGAGCCTCTGGCTCTGGCTTCCGCTCCAGGAATGAGTATTTATATGGGAAAATCGATATGCAAATCAAGCTCGTTCCTGGCAACTCTGCCGGCACTGTCACTGCCTACTACTTGCGCTCAGAAGGGTCTGCGTGGGACGAAATCGATTTCGAGTTTTTGGGGAATCTGAGCGGCGATCCTTACACTGTTCACACCAATGTGTTCAGCCAGGGGAAGGGCAACAGAGAGCAGCAGTTCCATCTCTGGTTCGACCCAACTGCTGATTTCCACACCTATTCAATTCTCTGGAATCCCCAGCGCATTGTCTTCTACGTGGACGGCACACCCATTAGAGAGTTCAAGAACCAGGAGTCAATTGGCGTTGCATTCCCCAAAAATCAGCCCATGAGGCTTCAATCCAGTCTCTGGAACGCCGATGATTGGGCAACCAGAGGTGGGTTAGTGAAGACCGATTGGACTCAGGCTCCATTCACCGCATCTTACAGAAACTTCAATGAAAACGCTTGCATTTGGTCATCGGGACAGTCGTCTTGTGGGTCGAATTCGCAGCCGACCTCCGACGACAAGTCGTGGTTCTCTCAGGAACTGGATTCCGACAGCCAAGGAAGGATGAACTGGGTCCAAAAGAACTACATGATCTACAATTACTGCACCGATATTAAGCGATTTCCTCAGGGCATGCCTCCCGAATGCAATGCCACTGCC MDNANLLALSLDKASGSGFQSKNQYLFGRFDIKIKLVPGNSAGTVTAYYLRSQESLWDEIDFEFLGNLSGQPYIVHTNVYIQGQGDREQQFYLWFDPTADFHTYSFLWNPTHAMRLYASLWDAEEWATRGGLVKTDWTKAPFTASFRSYNANGCVWSDAASWCGQNSTPWLSEALDSGSQKVLRWILNNGDLLSLSLDRASGSGFRSRNEYLYGKIDMQIKLVPGNSAGTVTAYYLRSEGSAWDEIDFEFLGNLSGDPYTVHTNVFSQGKGNREQQFHLWFDPTADFHTYSILWNPQRIVFYVDGTPIREFKNQESIGVAFPKNQPMRLQSSLWNADDWATRGGLVKTDWTQAPFTASYRNFNENACIWSSGQSSCGSNSQPTSDDKSWFSQELDSDSQGRMNWVQKNYMIYNYCTDIKRFPQGMPPECNATA
BLAST of Cp4.1LG18g06180 vs. Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1) HSP 1 Score: 412.5 bits (1059), Expect = 5.6e-114 Identity = 192/246 (78.05%), Postives = 212/246 (86.18%), Query Frame = 1
BLAST of Cp4.1LG18g06180 vs. Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 1.1e-112 Identity = 181/246 (73.58%), Postives = 216/246 (87.80%), Query Frame = 1
BLAST of Cp4.1LG18g06180 vs. Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2) HSP 1 Score: 388.3 bits (996), Expect = 1.1e-106 Identity = 175/244 (71.72%), Postives = 206/244 (84.43%), Query Frame = 1
BLAST of Cp4.1LG18g06180 vs. Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2) HSP 1 Score: 386.3 bits (991), Expect = 4.3e-106 Identity = 176/248 (70.97%), Postives = 208/248 (83.87%), Query Frame = 1
BLAST of Cp4.1LG18g06180 vs. Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1) HSP 1 Score: 377.5 bits (968), Expect = 2.0e-103 Identity = 163/243 (67.08%), Postives = 204/243 (83.95%), Query Frame = 1
BLAST of Cp4.1LG18g06180 vs. TrEMBL
Match: Q84JB9_CUCSA (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus GN=XTH3 PE=2 SV=1) HSP 1 Score: 501.1 bits (1289), Expect = 1.3e-138 Identity = 228/248 (91.94%), Postives = 239/248 (96.37%), Query Frame = 1
BLAST of Cp4.1LG18g06180 vs. TrEMBL
Match: A0A061GXF9_THECC (Xyloglucan endotransglucosylase/hydrolase OS=Theobroma cacao GN=TCM_038912 PE=3 SV=1) HSP 1 Score: 447.6 bits (1150), Expect = 1.7e-122 Identity = 204/244 (83.61%), Postives = 223/244 (91.39%), Query Frame = 1
BLAST of Cp4.1LG18g06180 vs. TrEMBL
Match: V4UQS4_9ROSI (Xyloglucan endotransglucosylase/hydrolase OS=Citrus clementina GN=CICLE_v10008778mg PE=3 SV=1) HSP 1 Score: 446.4 bits (1147), Expect = 3.9e-122 Identity = 204/245 (83.27%), Postives = 223/245 (91.02%), Query Frame = 1
BLAST of Cp4.1LG18g06180 vs. TrEMBL
Match: V4U1H8_9ROSI (Xyloglucan endotransglucosylase/hydrolase OS=Citrus clementina GN=CICLE_v10008951mg PE=3 SV=1) HSP 1 Score: 445.7 bits (1145), Expect = 6.6e-122 Identity = 203/245 (82.86%), Postives = 223/245 (91.02%), Query Frame = 1
BLAST of Cp4.1LG18g06180 vs. TrEMBL
Match: A5C3A3_VITVI (Xyloglucan endotransglucosylase/hydrolase OS=Vitis vinifera GN=VIT_11s0052g01300 PE=3 SV=1) HSP 1 Score: 445.7 bits (1145), Expect = 6.6e-122 Identity = 206/248 (83.06%), Postives = 222/248 (89.52%), Query Frame = 1
BLAST of Cp4.1LG18g06180 vs. TAIR10
Match: AT4G25810.1 (AT4G25810.1 xyloglucan endotransglycosylase 6) HSP 1 Score: 412.5 bits (1059), Expect = 3.1e-115 Identity = 192/246 (78.05%), Postives = 212/246 (86.18%), Query Frame = 1
BLAST of Cp4.1LG18g06180 vs. TAIR10
Match: AT5G57560.1 (AT5G57560.1 Xyloglucan endotransglucosylase/hydrolase family protein) HSP 1 Score: 408.3 bits (1048), Expect = 5.9e-114 Identity = 181/246 (73.58%), Postives = 216/246 (87.80%), Query Frame = 1
BLAST of Cp4.1LG18g06180 vs. TAIR10
Match: AT5G57550.1 (AT5G57550.1 xyloglucan endotransglucosylase/hydrolase 25) HSP 1 Score: 388.3 bits (996), Expect = 6.3e-108 Identity = 175/244 (71.72%), Postives = 206/244 (84.43%), Query Frame = 1
BLAST of Cp4.1LG18g06180 vs. TAIR10
Match: AT4G30270.1 (AT4G30270.1 xyloglucan endotransglucosylase/hydrolase 24) HSP 1 Score: 386.3 bits (991), Expect = 2.4e-107 Identity = 176/248 (70.97%), Postives = 208/248 (83.87%), Query Frame = 1
BLAST of Cp4.1LG18g06180 vs. TAIR10
Match: AT5G48070.1 (AT5G48070.1 xyloglucan endotransglucosylase/hydrolase 20) HSP 1 Score: 377.5 bits (968), Expect = 1.1e-104 Identity = 163/243 (67.08%), Postives = 204/243 (83.95%), Query Frame = 1
BLAST of Cp4.1LG18g06180 vs. NCBI nr
Match: gi|659107330|ref|XP_008453618.1| (PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Cucumis melo]) HSP 1 Score: 501.9 bits (1291), Expect = 1.1e-138 Identity = 229/248 (92.34%), Postives = 240/248 (96.77%), Query Frame = 1
BLAST of Cp4.1LG18g06180 vs. NCBI nr
Match: gi|525507073|ref|NP_001267579.1| (probable xyloglucan endotransglucosylase/hydrolase protein 23-like precursor [Cucumis sativus]) HSP 1 Score: 501.1 bits (1289), Expect = 1.9e-138 Identity = 228/248 (91.94%), Postives = 239/248 (96.37%), Query Frame = 1
BLAST of Cp4.1LG18g06180 vs. NCBI nr
Match: gi|590580780|ref|XP_007014165.1| (Xyloglucan endotransglucosylase/hydrolase family protein [Theobroma cacao]) HSP 1 Score: 447.6 bits (1150), Expect = 2.5e-122 Identity = 204/244 (83.61%), Postives = 223/244 (91.39%), Query Frame = 1
BLAST of Cp4.1LG18g06180 vs. NCBI nr
Match: gi|567922828|ref|XP_006453420.1| (hypothetical protein CICLE_v10008778mg [Citrus clementina]) HSP 1 Score: 446.4 bits (1147), Expect = 5.6e-122 Identity = 204/245 (83.27%), Postives = 223/245 (91.02%), Query Frame = 1
BLAST of Cp4.1LG18g06180 vs. NCBI nr
Match: gi|225446117|ref|XP_002274827.1| (PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Vitis vinifera]) HSP 1 Score: 445.7 bits (1145), Expect = 9.5e-122 Identity = 206/248 (83.06%), Postives = 222/248 (89.52%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |