Cp4.1LG18g05410 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG18g05410
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTemperature-induced lipocalin
LocationCp4.1LG18 : 6081541 .. 6082846 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GACAGCTGAAAAGACCTTATAGATAAGCATCCACACAAGTAATCCTGTGTCTACAAATATGTTGTCCAGAAACCAACATTTCAGTGTGTTGTTTCACATTTGAAACGATGGCAAAGAAAGAGATGGAAGTGGTTAAAGGGTTGGATCTTGAGAAGTACATGGGAAGATGGTATGAGATAGCTTCAATTCCATCGAGAAATCAACCAAAGAATGGTGTGAACACAAGGGCTACTTATACGCTCAAAGAAGATGGAACTGTGAAAGTGGTGAATGAAACTTGGAGCGATGGCAAGAGAAGTTCCATAGAAGGTGTGGCTTATAAGGCTGAGCCTTCAAGCCAGGAGGCCAAGTTCAAGGTCAAATTCTATTTGCCTCCCTTCCTTCCAATCATTCCAGTTGTTGGGAATTACTGGGTTTTGTATATTGATGGTGATTATCAGTATGTCCTGGTTGGGGAGCCTTCAAGGAAGAATCTTTGGGTATGTTTTCAAATTTCACTCTCATTCCAAAGTTTCATATTCTGGGTTTTGTATACTGATGGTGTTTTTTTGGTGTATTGTGCAGATATTGTGCAGAAATACTCATCTTAACGAGGAGATATACAATGAGCTGCTTGAAAAAGCCAAGGAATTGGGTTATGATGTAAACAAACTGCACAAGACACCACAGAGCGATCCTCCACCAGAAGGTGAAGGTCCCAAAGATACAAAAGGCATATGGTGGATAAAGTCCATTCTTCTGGGAAAGTAAACAGATCACAGAAGCTTATGTTTATAACATCAGAACCCTATCTTGCTACTCTTCTCATCAGTTGTGTAAAATGTTGGTTTGTGAGTACATATTATGTGTGTATCTCGGTATGATCGTGCTTTAAATTGCACTCATGGTTTACTGATCATAAGTACAACTTGTTAGTAAGATCCGAACTCGTCTAATAAAAATGTGATTGCAAGAGGTAACTCGATCGACATTTATCAGCATTGATTAACATCAAGAGGGATCAATAATGAACATTCCATTGAAAATGGAAACAAGCATATGTGAACTAACACCAATGAAGAAAATGAGACGTCAATATACTATACGAGTAGGATCTACGCCCAACATTTTGTTCCCCCATCTTTTAAACAACAAACGAGGATAAAATTCACAAGATTCAGTGAAACAAACAAATTGTAAAGGATATAATCATATTACAATCATCAATTATCTGGTTCAACTTTCTATGTGATGCCATCAAAAGCTTACAGTATGGTACAACACTGGTTGGTCTTTTTAGCTTGTTTGTAGAACATCTGTTCAATCA

mRNA sequence

GACAGCTGAAAAGACCTTATAGATAAGCATCCACACAAGTAATCCTGTGTCTACAAATATGTTGTCCAGAAACCAACATTTCAGTGTGTTGTTTCACATTTGAAACGATGGCAAAGAAAGAGATGGAAGTGGTTAAAGGGTTGGATCTTGAGAAGTACATGGGAAGATGGTATGAGATAGCTTCAATTCCATCGAGAAATCAACCAAAGAATGGTGTGAACACAAGGGCTACTTATACGCTCAAAGAAGATGGAACTGTGAAAGTGGTGAATGAAACTTGGAGCGATGGCAAGAGAAGTTCCATAGAAGGTGTGGCTTATAAGGCTGAGCCTTCAAGCCAGGAGGCCAAGTTCAAGGTCAAATTCTATTTGCCTCCCTTCCTTCCAATCATTCCAGTTGTTGGGAATTACTGGGTTTTGTATATTGATGGTGATTATCAGTATGTCCTGGTTGGGGAGCCTTCAAGGAAGAATCTTTGGATATTGTGCAGAAATACTCATCTTAACGAGGAGATATACAATGAGCTGCTTGAAAAAGCCAAGGAATTGGGTTATGATGTAAACAAACTGCACAAGACACCACAGAGCGATCCTCCACCAGAAGGTGAAGGTCCCAAAGATACAAAAGGCATATGGTGGATAAAGTCCATTCTTCTGGGAAAGTAAACAGATCACAGAAGCTTATGTTTATAACATCAGAACCCTATCTTGCTACTCTTCTCATCAGTTGTGTAAAATGTTGGTTTGTGAGTACATATTATGTGTGTATCTCGGTATGATCGTGCTTTAAATTGCACTCATGGTTTACTGATCATAAGTACAACTTGTTAGTAAGATCCGAACTCGTCTAATAAAAATGTGATTGCAAGAGGTAACTCGATCGACATTTATCAGCATTGATTAACATCAAGAGGGATCAATAATGAACATTCCATTGAAAATGGAAACAAGCATATGTGAACTAACACCAATGAAGAAAATGAGACGTCAATATACTATACGAGTAGGATCTACGCCCAACATTTTGTTCCCCCATCTTTTAAACAACAAACGAGGATAAAATTCACAAGATTCAGTGAAACAAACAAATTGTAAAGGATATAATCATATTACAATCATCAATTATCTGGTTCAACTTTCTATGTGATGCCATCAAAAGCTTACAGTATGGTACAACACTGGTTGGTCTTTTTAGCTTGTTTGTAGAACATCTGTTCAATCA

Coding sequence (CDS)

ATGGCAAAGAAAGAGATGGAAGTGGTTAAAGGGTTGGATCTTGAGAAGTACATGGGAAGATGGTATGAGATAGCTTCAATTCCATCGAGAAATCAACCAAAGAATGGTGTGAACACAAGGGCTACTTATACGCTCAAAGAAGATGGAACTGTGAAAGTGGTGAATGAAACTTGGAGCGATGGCAAGAGAAGTTCCATAGAAGGTGTGGCTTATAAGGCTGAGCCTTCAAGCCAGGAGGCCAAGTTCAAGGTCAAATTCTATTTGCCTCCCTTCCTTCCAATCATTCCAGTTGTTGGGAATTACTGGGTTTTGTATATTGATGGTGATTATCAGTATGTCCTGGTTGGGGAGCCTTCAAGGAAGAATCTTTGGATATTGTGCAGAAATACTCATCTTAACGAGGAGATATACAATGAGCTGCTTGAAAAAGCCAAGGAATTGGGTTATGATGTAAACAAACTGCACAAGACACCACAGAGCGATCCTCCACCAGAAGGTGAAGGTCCCAAAGATACAAAAGGCATATGGTGGATAAAGTCCATTCTTCTGGGAAAGTAA

Protein sequence

MAKKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRATYTLKEDGTVKVVNETWSDGKRSSIEGVAYKAEPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSRKNLWILCRNTHLNEEIYNELLEKAKELGYDVNKLHKTPQSDPPPEGEGPKDTKGIWWIKSILLGK
Homology
[Close]
BLAST of Cp4.1LG18g05410 vs. Swiss-Prot
Match: TIL_ARATH (Temperature-induced lipocalin-1 OS=Arabidopsis thaliana GN=TIL PE=1 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.0e-73
Identity = 130/184 (70.65%), Postives = 151/184 (82.07%), Query Frame = 1 

Query: 3   KKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRATYTLKEDGTVKVVNETWSDGK 62
           KKEMEVVKGL++E+YMGRWYEIAS PSR QPKNGV+TRATYTL  DGT+ V+NETWS+GK
Sbjct: 4   KKEMEVVKGLNVERYMGRWYEIASFPSRFQPKNGVDTRATYTLNPDGTIHVLNETWSNGK 63

Query: 63  RSSIEGVAYKAEPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSRKN 122
           R  IEG AYKA+P S EAK KVKFY+PPFLPIIPV G+YWVLYID DYQ+ L+G+PSR  
Sbjct: 64  RGFIEGSAYKADPKSDEAKLKVKFYVPPFLPIIPVTGDYWVLYIDPDYQHALIGQPSRSY 123

Query: 123 LWILCRNTHLNEEIYNELLEKAKELGYDVNKLHKTPQSDPPPEGE-GPKDTKGIWWIKSI 182
           LWIL R   + EE Y +L+EKA E GYD++KLHKTPQSD PPE    P+D+KG+WW KS 
Sbjct: 124 LWILSRTAQMEEETYKQLVEKAVEEGYDISKLHKTPQSDTPPESNTAPEDSKGVWWFKS- 183

Query: 183 LLGK 186
           L GK
Sbjct: 184 LFGK 186

[Close]
BLAST of Cp4.1LG18g05410 vs. Swiss-Prot
Match: YR877_MIMIV (Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R877 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.5e-15
Identity = 54/155 (34.84%), Postives = 81/155 (52.26%), Query Frame = 1 

Query: 2   AKKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRATYTLKEDGTVKVVNETWSDG 61
           +K+++     LD+++YMG WYEIA +P+  Q K  VN+ A Y L E   ++V N    +G
Sbjct: 18  SKRDVVSQSSLDIQRYMGTWYEIARLPTSFQ-KGCVNSTANYQLLEPNKIQVTNNCEING 77

Query: 62  KRSSIEGVAYKAEPSSQEAKFKVKFYLPPFLPIIPVVG--NYWVLYIDGDYQYVLVGEPS 121
           + +S+ G A  A       +    F  P  L +    G   Y V++ID +YQY +V    
Sbjct: 78  RINSVTGTAIPA----ANTRIVSGFLTPASLMVNFGYGFSPYNVIFIDENYQYAIV-SGG 137

Query: 122 RKNLWILCRNTHLNEEIYNELLEKAKELGYDVNKL 155
              LWIL R  ++N+  YN+L+      GYDVN L
Sbjct: 138 NDTLWILSRFKNINQSTYNQLVTIVYNQGYDVNNL 166

[Close]
BLAST of Cp4.1LG18g05410 vs. Swiss-Prot
Match: APOD_CAVPO (Apolipoprotein D OS=Cavia porcellus GN=APOD PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-13
Identity = 60/164 (36.59%), Postives = 84/164 (51.22%), Query Frame = 1 

Query: 8   VVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRATYTLKEDGTVKVVN-ETWSDGKRSSI 67
           V +  DL KY+GRWYEI  IP   +  N +  +A Y+LKE+G VKV+N E   DG  + I
Sbjct: 33  VQENFDLNKYLGRWYEIEKIPVSFEKGNCI--QANYSLKENGRVKVLNQELRPDGTVNQI 92

Query: 68  EGVAYKAEPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSR------ 127
           EG A  +   ++ AK  VKF+    +P  P    YWVL  D D  Y LV   +       
Sbjct: 93  EGEATHSN-ITEPAKLGVKFF--QLMPSAP----YWVLATDYD-NYALVYSCTNIIWLFH 152

Query: 128 -KNLWILCRNTHLNEEIYNELLEKAKELGYDVNKLHKTPQSDPP 164
             ++WIL RN +L +E    L +       D+ K+  T Q++ P
Sbjct: 153 VDHIWILGRNRYLPQETVTYLKDILTSNNIDIEKMTLTDQANCP 186

[Close]
BLAST of Cp4.1LG18g05410 vs. Swiss-Prot
Match: APOD_MACFA (Apolipoprotein D OS=Macaca fascicularis GN=APOD PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.4e-13
Identity = 60/163 (36.81%), Postives = 81/163 (49.69%), Query Frame = 1 

Query: 8   VVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRATYTLKEDGTVKVVN-ETWSDGKRSSI 67
           V +  D  KY GRWYEI  IP+  +   G   +A Y+LKE+G +KV+N E  +DG  + I
Sbjct: 33  VQENFDPNKYFGRWYEIEKIPTTFE--KGRCIQANYSLKENGKIKVLNQELRADGTVNQI 92

Query: 68  EGVAYKAEPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSRKNL--- 127
           EG A      ++ AK +VKF+   F+P  P    YWVL  D +   ++    S  NL   
Sbjct: 93  EGEASPVN-ITEPAKLEVKFFW--FMPSAP----YWVLATDYENYALVYSCVSIINLFRV 152

Query: 128 ---WILCRNTHLNEEIYNELLEKAKELGYDVNKLHKTPQSDPP 164
              WIL RN HL  E  + L         DV K+  T Q + P
Sbjct: 153 DYAWILARNRHLPSETVDFLKNILTSNNIDVKKMTVTDQENCP 186

[Close]
BLAST of Cp4.1LG18g05410 vs. Swiss-Prot
Match: APOD_MOUSE (Apolipoprotein D OS=Mus musculus GN=Apod PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.0e-13
Identity = 55/164 (33.54%), Postives = 87/164 (53.05%), Query Frame = 1 

Query: 8   VVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRATYTLKEDGTVKVVNETWS-DGKRSSI 67
           V +  D++KY+GRWYEI  IP+  +  N +  +A Y+L E+G ++V+N+  S DG  + +
Sbjct: 33  VQENFDVKKYLGRWYEIEKIPASFEKGNCI--QANYSLMENGNIEVLNKELSPDGTMNQV 92

Query: 68  EGVAYKAEPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSR------ 127
           +G A K    S+ AK +V+F+  P +P  P    YW+L  D +  Y LV   +       
Sbjct: 93  KGEA-KQSNVSEPAKLEVQFF--PLMPPAP----YWILATDYE-NYALVYSCTTFFWLFH 152

Query: 128 -KNLWILCRNTHLNEEIYNELLEKAKELGYDVNKLHKTPQSDPP 164
              +WIL RN +L  E    L +     G D+ K+  T Q++ P
Sbjct: 153 VDFVWILGRNPYLPPETITYLKDILTSNGIDIEKMTTTDQANCP 186

[Close]
BLAST of Cp4.1LG18g05410 vs. TrEMBL
Match: A0A0A0LW70_CUCSA (Temperature-induced lipocalin OS=Cucumis sativus GN=Csa_1G268280 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 4.2e-94
Identity = 168/183 (91.80%), Postives = 174/183 (95.08%), Query Frame = 1 

Query: 1   MAKKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRATYTLKEDGTVKVVNETWSD 60
           MAKKEMEVVKGLDLEKYMGRWYEIAS+PSRNQPKNGVNTRA Y+L EDGTVKVVNETWSD
Sbjct: 1   MAKKEMEVVKGLDLEKYMGRWYEIASVPSRNQPKNGVNTRANYSLNEDGTVKVVNETWSD 60

Query: 61  GKRSSIEGVAYKAEPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSR 120
           GKRSSIEGVAYKA+PSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSR
Sbjct: 61  GKRSSIEGVAYKADPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSR 120

Query: 121 KNLWILCRNTHLNEEIYNELLEKAKELGYDVNKLHKTPQSDPPPE-GEGPKDTKGIWWIK 180
           KNLWILCRNT LNE IYNELL+KAK+ GYDV KLHKTPQS+PPPE  EGPKDTKGIWW K
Sbjct: 121 KNLWILCRNTQLNEAIYNELLQKAKDEGYDVTKLHKTPQSEPPPETDEGPKDTKGIWWFK 180

Query: 181 SIL 183
           SIL
Sbjct: 181 SIL 183

[Close]
BLAST of Cp4.1LG18g05410 vs. TrEMBL
Match: Q38JB8_9ROSI (Temperature-induced lipocalin OS=Populus tremula x Populus tremuloides GN=TIL PE=2 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.0e-84
Identity = 145/180 (80.56%), Postives = 164/180 (91.11%), Query Frame = 1 

Query: 3   KKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRATYTLKEDGTVKVVNETWSDGK 62
           KKEMEVVKG+DL++YMGRWYEIAS PSR QPKNGVNTRATYTL EDGTV V+NETW+DGK
Sbjct: 4   KKEMEVVKGVDLKRYMGRWYEIASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWNDGK 63

Query: 63  RSSIEGVAYKAEPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSRKN 122
           R SIEG AYKA+P+S EAK KVKFY+PPFLPIIPVVG+YW+LY+D DYQY L+G+PSR +
Sbjct: 64  RGSIEGSAYKADPNSDEAKLKVKFYVPPFLPIIPVVGDYWILYLDDDYQYALIGQPSRSS 123

Query: 123 LWILCRNTHLNEEIYNELLEKAKELGYDVNKLHKTPQSDPPPEGEGPKDTKGIWWIKSIL 182
           LWILCR TH+ +EIYN+L+EKAKE GYDV KLHKTPQ+DPPPE EGPKDTKGIWWIKSIL
Sbjct: 124 LWILCRKTHMEDEIYNQLVEKAKEEGYDVGKLHKTPQTDPPPEEEGPKDTKGIWWIKSIL 183

[Close]
BLAST of Cp4.1LG18g05410 vs. TrEMBL
Match: Q38JD5_POPBA (Temperature-induced lipocalin OS=Populus balsamifera GN=TIL' PE=2 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.3e-84
Identity = 145/180 (80.56%), Postives = 163/180 (90.56%), Query Frame = 1 

Query: 3   KKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRATYTLKEDGTVKVVNETWSDGK 62
           KKEMEVVKG+DL++YMGRWYEIAS PSR QPKNGVNTRATYTL EDGTV V+NETW+DGK
Sbjct: 4   KKEMEVVKGVDLKRYMGRWYEIASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWNDGK 63

Query: 63  RSSIEGVAYKAEPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSRKN 122
           R SIEG AYKA+P+S EAK KVKFY+PPFLPIIPVVG+YW+LY+D DYQY L+G+PSR  
Sbjct: 64  RGSIEGSAYKADPNSDEAKLKVKFYVPPFLPIIPVVGDYWILYLDDDYQYALIGQPSRSY 123

Query: 123 LWILCRNTHLNEEIYNELLEKAKELGYDVNKLHKTPQSDPPPEGEGPKDTKGIWWIKSIL 182
           LWILCR TH+ +EIYN+L+EKAKE GYDV KLHKTPQ+DPPPE EGPKDTKGIWWIKSIL
Sbjct: 124 LWILCRKTHMEDEIYNQLVEKAKEEGYDVGKLHKTPQTDPPPEEEGPKDTKGIWWIKSIL 183

[Close]
BLAST of Cp4.1LG18g05410 vs. TrEMBL
Match: B6V700_POPCN (Temperature-induced lipocalin OS=Populus canescens GN=TIL PE=2 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.3e-84
Identity = 145/180 (80.56%), Postives = 163/180 (90.56%), Query Frame = 1 

Query: 3   KKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRATYTLKEDGTVKVVNETWSDGK 62
           KKEMEVVKG+DL++YMGRWYEIAS PSR QPKNGVNTRATYTL EDGTV V+NETW+DGK
Sbjct: 4   KKEMEVVKGVDLKRYMGRWYEIASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWNDGK 63

Query: 63  RSSIEGVAYKAEPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSRKN 122
           R SIEG AYKA+P+S EAK KVKFY+PPFLPIIPVVG+YW+LY+D DYQY L+G+PSR  
Sbjct: 64  RGSIEGSAYKADPNSDEAKLKVKFYVPPFLPIIPVVGDYWILYLDDDYQYALIGQPSRSY 123

Query: 123 LWILCRNTHLNEEIYNELLEKAKELGYDVNKLHKTPQSDPPPEGEGPKDTKGIWWIKSIL 182
           LWILCR TH+ +EIYN+L+EKAKE GYDV KLHKTPQ+DPPPE EGPKDTKGIWWIKSIL
Sbjct: 124 LWILCRKTHMEDEIYNQLVEKAKEEGYDVGKLHKTPQTDPPPEEEGPKDTKGIWWIKSIL 183

[Close]
BLAST of Cp4.1LG18g05410 vs. TrEMBL
Match: I3S4M4_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 6.8e-84
Identity = 145/181 (80.11%), Postives = 167/181 (92.27%), Query Frame = 1 

Query: 1   MAKKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRATYTLKEDGTVKVVNETWSD 60
           MAK+EM+VVKGLDLE+YMGRWYEIA  PSR+QPK+GVNTRATY L +DGTV V+NETWS 
Sbjct: 1   MAKEEMQVVKGLDLERYMGRWYEIACFPSRDQPKDGVNTRATYALNDDGTVNVLNETWSG 60

Query: 61  GKRSSIEGVAYKAEPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSR 120
           GKRS I+G AYKAEP++ EAKFKVKF++PPFLPIIPVVG+YWVLYID DYQY L+G+ SR
Sbjct: 61  GKRSYIQGSAYKAEPNTDEAKFKVKFFVPPFLPIIPVVGDYWVLYIDQDYQYALIGQGSR 120

Query: 121 KNLWILCRNTHLNEEIYNELLEKAKELGYDVNKLHKTPQSDPPPEGEGPKDTKGIWWIKS 180
           K+LWILCRNTHL++EIYNEL+EKAK +GYDV+KLHKTPQSDPPPE EGP+DTKGIWWIKS
Sbjct: 121 KSLWILCRNTHLDDEIYNELVEKAKNVGYDVSKLHKTPQSDPPPEKEGPQDTKGIWWIKS 180

Query: 181 I 182
           I
Sbjct: 181 I 181

[Close]
BLAST of Cp4.1LG18g05410 vs. TAIR10
Match: AT5G58070.1 (AT5G58070.1 temperature-induced lipocalin)

HSP 1 Score: 276.6 bits (706), Expect = 1.1e-74
Identity = 130/184 (70.65%), Postives = 151/184 (82.07%), Query Frame = 1 

Query: 3   KKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRATYTLKEDGTVKVVNETWSDGK 62
           KKEMEVVKGL++E+YMGRWYEIAS PSR QPKNGV+TRATYTL  DGT+ V+NETWS+GK
Sbjct: 4   KKEMEVVKGLNVERYMGRWYEIASFPSRFQPKNGVDTRATYTLNPDGTIHVLNETWSNGK 63

Query: 63  RSSIEGVAYKAEPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSRKN 122
           R  IEG AYKA+P S EAK KVKFY+PPFLPIIPV G+YWVLYID DYQ+ L+G+PSR  
Sbjct: 64  RGFIEGSAYKADPKSDEAKLKVKFYVPPFLPIIPVTGDYWVLYIDPDYQHALIGQPSRSY 123

Query: 123 LWILCRNTHLNEEIYNELLEKAKELGYDVNKLHKTPQSDPPPEGE-GPKDTKGIWWIKSI 182
           LWIL R   + EE Y +L+EKA E GYD++KLHKTPQSD PPE    P+D+KG+WW KS 
Sbjct: 124 LWILSRTAQMEEETYKQLVEKAVEEGYDISKLHKTPQSDTPPESNTAPEDSKGVWWFKS- 183

Query: 183 LLGK 186
           L GK
Sbjct: 184 LFGK 186

[Close]
BLAST of Cp4.1LG18g05410 vs. NCBI nr
Match: gi|659086333|ref|XP_008443878.1| (PREDICTED: apolipoprotein D-like [Cucumis melo])

HSP 1 Score: 354.0 bits (907), Expect = 1.6e-94
Identity = 169/183 (92.35%), Postives = 176/183 (96.17%), Query Frame = 1 

Query: 1   MAKKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRATYTLKEDGTVKVVNETWSD 60
           MAKKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRA Y+L EDGTVKVVNETWSD
Sbjct: 1   MAKKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRANYSLNEDGTVKVVNETWSD 60

Query: 61  GKRSSIEGVAYKAEPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSR 120
           GKRSSIEGVAYKA+PSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSR
Sbjct: 61  GKRSSIEGVAYKADPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSR 120

Query: 121 KNLWILCRNTHLNEEIYNELLEKAKELGYDVNKLHKTPQSDPPPE-GEGPKDTKGIWWIK 180
           KNLWILCRNT LNEE+YNELL+KAK+ GYDV KLH+TPQS+PPPE  EGPKDTKGIWWIK
Sbjct: 121 KNLWILCRNTQLNEEMYNELLQKAKDEGYDVTKLHRTPQSEPPPETDEGPKDTKGIWWIK 180

Query: 181 SIL 183
           SIL
Sbjct: 181 SIL 183

[Close]
BLAST of Cp4.1LG18g05410 vs. NCBI nr
Match: gi|449457921|ref|XP_004146696.1| (PREDICTED: apolipoprotein D [Cucumis sativus])

HSP 1 Score: 352.1 bits (902), Expect = 6.1e-94
Identity = 168/183 (91.80%), Postives = 174/183 (95.08%), Query Frame = 1 

Query: 1   MAKKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRATYTLKEDGTVKVVNETWSD 60
           MAKKEMEVVKGLDLEKYMGRWYEIAS+PSRNQPKNGVNTRA Y+L EDGTVKVVNETWSD
Sbjct: 1   MAKKEMEVVKGLDLEKYMGRWYEIASVPSRNQPKNGVNTRANYSLNEDGTVKVVNETWSD 60

Query: 61  GKRSSIEGVAYKAEPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSR 120
           GKRSSIEGVAYKA+PSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSR
Sbjct: 61  GKRSSIEGVAYKADPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSR 120

Query: 121 KNLWILCRNTHLNEEIYNELLEKAKELGYDVNKLHKTPQSDPPPE-GEGPKDTKGIWWIK 180
           KNLWILCRNT LNE IYNELL+KAK+ GYDV KLHKTPQS+PPPE  EGPKDTKGIWW K
Sbjct: 121 KNLWILCRNTQLNEAIYNELLQKAKDEGYDVTKLHKTPQSEPPPETDEGPKDTKGIWWFK 180

Query: 181 SIL 183
           SIL
Sbjct: 181 SIL 183

[Close]
BLAST of Cp4.1LG18g05410 vs. NCBI nr
Match: gi|77744905|gb|ABB02406.1| (temperature-induced lipocalin [Populus tremula x Populus tremuloides])

HSP 1 Score: 320.9 bits (821), Expect = 1.5e-84
Identity = 145/180 (80.56%), Postives = 164/180 (91.11%), Query Frame = 1 

Query: 3   KKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRATYTLKEDGTVKVVNETWSDGK 62
           KKEMEVVKG+DL++YMGRWYEIAS PSR QPKNGVNTRATYTL EDGTV V+NETW+DGK
Sbjct: 4   KKEMEVVKGVDLKRYMGRWYEIASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWNDGK 63

Query: 63  RSSIEGVAYKAEPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSRKN 122
           R SIEG AYKA+P+S EAK KVKFY+PPFLPIIPVVG+YW+LY+D DYQY L+G+PSR +
Sbjct: 64  RGSIEGSAYKADPNSDEAKLKVKFYVPPFLPIIPVVGDYWILYLDDDYQYALIGQPSRSS 123

Query: 123 LWILCRNTHLNEEIYNELLEKAKELGYDVNKLHKTPQSDPPPEGEGPKDTKGIWWIKSIL 182
           LWILCR TH+ +EIYN+L+EKAKE GYDV KLHKTPQ+DPPPE EGPKDTKGIWWIKSIL
Sbjct: 124 LWILCRKTHMEDEIYNQLVEKAKEEGYDVGKLHKTPQTDPPPEEEGPKDTKGIWWIKSIL 183

[Close]
BLAST of Cp4.1LG18g05410 vs. NCBI nr
Match: gi|77744871|gb|ABB02389.1| (temperature-induced lipocalin' [Populus balsamifera])

HSP 1 Score: 319.7 bits (818), Expect = 3.4e-84
Identity = 145/180 (80.56%), Postives = 163/180 (90.56%), Query Frame = 1 

Query: 3   KKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRATYTLKEDGTVKVVNETWSDGK 62
           KKEMEVVKG+DL++YMGRWYEIAS PSR QPKNGVNTRATYTL EDGTV V+NETW+DGK
Sbjct: 4   KKEMEVVKGVDLKRYMGRWYEIASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWNDGK 63

Query: 63  RSSIEGVAYKAEPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSRKN 122
           R SIEG AYKA+P+S EAK KVKFY+PPFLPIIPVVG+YW+LY+D DYQY L+G+PSR  
Sbjct: 64  RGSIEGSAYKADPNSDEAKLKVKFYVPPFLPIIPVVGDYWILYLDDDYQYALIGQPSRSY 123

Query: 123 LWILCRNTHLNEEIYNELLEKAKELGYDVNKLHKTPQSDPPPEGEGPKDTKGIWWIKSIL 182
           LWILCR TH+ +EIYN+L+EKAKE GYDV KLHKTPQ+DPPPE EGPKDTKGIWWIKSIL
Sbjct: 124 LWILCRKTHMEDEIYNQLVEKAKEEGYDVGKLHKTPQTDPPPEEEGPKDTKGIWWIKSIL 183

[Close]
BLAST of Cp4.1LG18g05410 vs. NCBI nr
Match: gi|388494300|gb|AFK35216.1| (unknown [Lotus japonicus])

HSP 1 Score: 318.2 bits (814), Expect = 9.8e-84
Identity = 145/181 (80.11%), Postives = 167/181 (92.27%), Query Frame = 1 

Query: 1   MAKKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRATYTLKEDGTVKVVNETWSD 60
           MAK+EM+VVKGLDLE+YMGRWYEIA  PSR+QPK+GVNTRATY L +DGTV V+NETWS 
Sbjct: 1   MAKEEMQVVKGLDLERYMGRWYEIACFPSRDQPKDGVNTRATYALNDDGTVNVLNETWSG 60

Query: 61  GKRSSIEGVAYKAEPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSR 120
           GKRS I+G AYKAEP++ EAKFKVKF++PPFLPIIPVVG+YWVLYID DYQY L+G+ SR
Sbjct: 61  GKRSYIQGSAYKAEPNTDEAKFKVKFFVPPFLPIIPVVGDYWVLYIDQDYQYALIGQGSR 120

Query: 121 KNLWILCRNTHLNEEIYNELLEKAKELGYDVNKLHKTPQSDPPPEGEGPKDTKGIWWIKS 180
           K+LWILCRNTHL++EIYNEL+EKAK +GYDV+KLHKTPQSDPPPE EGP+DTKGIWWIKS
Sbjct: 121 KSLWILCRNTHLDDEIYNELVEKAKNVGYDVSKLHKTPQSDPPPEKEGPQDTKGIWWIKS 180

Query: 181 I 182
           I
Sbjct: 181 I 181

The following BLAST results are available for this feature:
BLAST of Cp4.1LG18g05410 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TIL_ARATH2.0e-7370.65Temperature-induced lipocalin-1 OS=Arabidopsis thaliana GN=TIL PE=1 SV=1[more]
YR877_MIMIV1.5e-1534.84Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R877 PE=1 SV... [more]
APOD_CAVPO1.4e-1336.59Apolipoprotein D OS=Cavia porcellus GN=APOD PE=2 SV=1[more]
APOD_MACFA2.4e-1336.81Apolipoprotein D OS=Macaca fascicularis GN=APOD PE=2 SV=1[more]
APOD_MOUSE4.0e-1333.54Apolipoprotein D OS=Mus musculus GN=Apod PE=1 SV=1[more]
BLAST of Cp4.1LG18g05410 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LW70_CUCSA4.2e-9491.80Temperature-induced lipocalin OS=Cucumis sativus GN=Csa_1G268280 PE=3 SV=1[more]
Q38JB8_9ROSI1.0e-8480.56Temperature-induced lipocalin OS=Populus tremula x Populus tremuloides GN=TIL PE... [more]
Q38JD5_POPBA2.3e-8480.56Temperature-induced lipocalin OS=Populus balsamifera GN=TIL' PE=2 SV=1[more]
B6V700_POPCN2.3e-8480.56Temperature-induced lipocalin OS=Populus canescens GN=TIL PE=2 SV=1[more]
I3S4M4_LOTJA6.8e-8480.11Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
BLAST of Cp4.1LG18g05410 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58070.11.1e-7470.65 temperature-induced lipocalin[more]
BLAST of Cp4.1LG18g05410 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659086333|ref|XP_008443878.1|1.6e-9492.35PREDICTED: apolipoprotein D-like [Cucumis melo][more]
gi|449457921|ref|XP_004146696.1|6.1e-9491.80PREDICTED: apolipoprotein D [Cucumis sativus][more]
gi|77744905|gb|ABB02406.1|1.5e-8480.56temperature-induced lipocalin [Populus tremula x Populus tremuloides][more]
gi|77744871|gb|ABB02389.1|3.4e-8480.56temperature-induced lipocalin' [Populus balsamifera][more]
gi|388494300|gb|AFK35216.1|9.8e-8480.11unknown [Lotus japonicus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: INTERPRO
TermDefinition
IPR022272Lipocalin_CS
IPR022271Lipocalin_ApoD
IPR012674Calycin
IPR011038Calycin-like
IPR002446Lipocalin_bac
IPR000566Lipocln_cytosolic_FA-bd_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042538 hyperosmotic salinity response
biological_process GO:0009408 response to heat
biological_process GO:0009416 response to light stimulus
biological_process GO:0006810 transport
biological_process GO:0009735 response to cytokinin
biological_process GO:0008150 biological_process
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0005215 transporter activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG18g05410.1Cp4.1LG18g05410.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000566Lipocalin/cytosolic fatty-acid binding domainPFAMPF08212Lipocalin_2coord: 12..159
score: 1.5
IPR002446Lipocalin, bacterialPRINTSPR01171BCTLIPOCALINcoord: 49..58
score: 2.3E-5coord: 121..132
score: 2.3E-5coord: 12..26
score: 2.3E-5coord: 148..158
score: 2.
IPR011038Calycin-likeunknownSSF50814Lipocalinscoord: 5..166
score: 7.48
IPR012674CalycinGENE3DG3DSA:2.40.128.20coord: 4..161
score: 2.2
IPR022271Lipocalin, ApoD typePIRPIRSF036893Lipocalin_ApoDcoord: 1..169
score: 2.9
IPR022272Lipocalin family conserved sitePROSITEPS00213LIPOCALINcoord: 11..24
scor
NoneNo IPR availablePANTHERPTHR10612APOLIPOPROTEIN Dcoord: 5..182
score: 1.3E
NoneNo IPR availablePANTHERPTHR10612:SF19SUBFAMILY NOT NAMEDcoord: 5..182
score: 1.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG18g05410Cucsa.350880Cucumber (Gy14) v1cgycpeB0916
Cp4.1LG18g05410CmaCh10G004820Cucurbita maxima (Rimu)cmacpeB080
Cp4.1LG18g05410CmoCh10G005150Cucurbita moschata (Rifu)cmocpeB055
Cp4.1LG18g05410CmoCh11G004750Cucurbita moschata (Rifu)cmocpeB108
Cp4.1LG18g05410Cla018714Watermelon (97103) v1cpewmB372
Cp4.1LG18g05410Csa1G268280Cucumber (Chinese Long) v2cpecuB350
Cp4.1LG18g05410MELO3C010244Melon (DHL92) v3.5.1cpemeB334
Cp4.1LG18g05410ClCG06G012210Watermelon (Charleston Gray)cpewcgB335
Cp4.1LG18g05410CSPI01G17460Wild cucumber (PI 183967)cpecpiB351
Cp4.1LG18g05410Lsi11G003660Bottle gourd (USVL1VR-Ls)cpelsiB285
Cp4.1LG18g05410Lsi06G010380Bottle gourd (USVL1VR-Ls)cpelsiB308
Cp4.1LG18g05410MELO3C010244.2Melon (DHL92) v3.6.1cpemedB392
Cp4.1LG18g05410CsaV3_2G003400Cucumber (Chinese Long) v3cpecucB0454
Cp4.1LG18g05410CsaV3_1G028710Cucumber (Chinese Long) v3cpecucB0429
Cp4.1LG18g05410Bhi02G000710Wax gourdcpewgoB0466
Cp4.1LG18g05410CsGy2G002300Cucumber (Gy14) v2cgybcpeB208
Cp4.1LG18g05410Carg17470Silver-seed gourdcarcpeB0358
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG18g05410Cp4.1LG04g08960Cucurbita pepo (Zucchini)cpecpeB360
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG18g05410Cucurbita pepo (Zucchini)cpecpeB113
Cp4.1LG18g05410Cucurbita pepo (Zucchini)cpecpeB370
Cp4.1LG18g05410Cucumber (Gy14) v1cgycpeB0352
Cp4.1LG18g05410Cucurbita maxima (Rimu)cmacpeB038
Cp4.1LG18g05410Cucurbita maxima (Rimu)cmacpeB132
Cp4.1LG18g05410Cucurbita maxima (Rimu)cmacpeB775
Cp4.1LG18g05410Cucurbita moschata (Rifu)cmocpeB013
Cp4.1LG18g05410Cucurbita moschata (Rifu)cmocpeB730
Cp4.1LG18g05410Bottle gourd (USVL1VR-Ls)cpelsiB297
Cp4.1LG18g05410Watermelon (Charleston Gray)cpewcgB334
Cp4.1LG18g05410Watermelon (97103) v1cpewmB362
Cp4.1LG18g05410Melon (DHL92) v3.5.1cpemeB343
Cp4.1LG18g05410Cucumber (Gy14) v2cgybcpeB040
Cp4.1LG18g05410Cucumber (Gy14) v2cgybcpeB499
Cp4.1LG18g05410Melon (DHL92) v3.6.1cpemedB405
Cp4.1LG18g05410Silver-seed gourdcarcpeB0897
Cp4.1LG18g05410Silver-seed gourdcarcpeB0185
Cp4.1LG18g05410Silver-seed gourdcarcpeB0715
Cp4.1LG18g05410Cucumber (Chinese Long) v3cpecucB0460
Cp4.1LG18g05410Wax gourdcpewgoB0454