Cp4.1LG18g05350 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG18g05350
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptionserine-rich protein-related
LocationCp4.1LG18 : 5969691 .. 5974532 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTTTCTTCTAGAAGATCGAGCGGGCCTGTTATGAGGTCTCTCTCACCTTCTGGGAGATTCTGTGGCTCCTATTCTTCTTCTTCGTCTTCGTCTCCGTCTTCTTCGTCATCGGCGTTTGCGTCTTCCACATCAAGCTTTTCCACTGAAAACCCTACTTCGTTTTTCCGTAGATCTCTGTCTCCGTCTCGTGTTCATCTACAAGGTTCTTCTTCTTCTACGTCGGCGTCGTCCGTGAGATTTGCACTGGACCGGTCTATTTCTCCGAATCGGCATATCTCTGTTTTGACTCGTGGCGGTGGGAATCAAGTAGTGAAGAGGCAGAGCAACCAGAAGAGGACGTGCTTGTGCTCTCCGACCACGCATCCTGGTTCGTTTCGGTGTAGTCTCCATAAAGGCGTTCCGTCGCAGCCTACGACTCCTTACTCGTCTAATCGACTCAACGCGCGGAGATCGGCGATGACGAACTCTTTGGTTAGAATCGGAGGAGTTGAAGGCGATTTAGTGAGGCGGGCCCTGGCGTCTCTTATCCGACCTTCGTCTCACAGTCAAAGGCGTCGAGCGGATTTCTGTCCGCGACCGAGCCGGCTTTCAATCATGTCGAAAGCCGATGATCTGTGATGGAAATTTTGGTACGTTGGCCAATAACCTCTGGTTTATTAATCTTTTTATCTCTTCTCTGAGCTTTCAACGACGAAGACGGTGGATTCCGACCACAGGTTCGACGGAAGTGATGGATCTTAGCGCAGGGATACAGAGTTGGAGGCGAAGTATGGGAATCGAATCTGGTTGCCTCTTCAGTGTACCTCGCTTCACGGAGTTGAACTAAAGAACCTATATAACTCTGTGTGTATACATAGCATAAATATATATGGAAGTAAATACAGTTGCCGCGATATTGATAACAATTCGTGGAACTTTTGAACCCTAATTTTTCACCAATTTCAAAATGAAACATAATCAAACCCTAACTGGTTGTAGTTTCGAACTGTACAGGGCTTCTAATTCGAAAAGGAACGATTCAAAATTATTTGCGCCTGCTAATCGCTGAAATCAGTTCATCGTTATCCATATTCCATACGATTCAAATTGTTTCCAGAACACCTATGTTTGTTATTTTGTTCAACGTACACGTCTCCTTCCTTCTGCTGTCGCCTCCGTTCATGGTGGCCGTGAAATTGAAGCCGGTAATTTACGCATTCATGCTTGCCGTACTCCGTTTTGTCAATCGGATGATTTCTTAAAGGTGATTCAATCTCCATCTTTCTTCTTCCTATTTCCCTTGTTTCTTTGAGTTAGATGTTTGTAATTTCTGTTTGTTCTGTTTACAGATGCATTTGAAGGTTGAAACCTAAGAGCTCTGATTTTGAACTGTGAATTTTGTGATCTGAAAGTAAATTCAGGTGGAGATGATTCAAATTTGAATGAAGTTATGAACTAAGACAGACGATGGAATTCTTGACAGCGACTGAACAATTATAATTGGAATTAATTGGAAACAAATCCTGGAATTCAAAAAGGTAAATAACATCAGAGCTGAGATGAAGTTAGAATGGAATAGAAAAGAATCGAATGAAACATTGAATGGTAGGGTAACTCGGTGGTGCGGTGGAGTGGATGGTTGACCTGTCAAGGCTCAAATGGGTGGAAGGAACCGACTGCTATCTGCCTATGAAAAACCAATCCAAATCCCTATTGATTGTTCATAAAACTATTCAATGGAAGAATGCCCCTTTGAGAGATGAAGAGCTGCCTATGTCAGGAGATGTTACATCTTTTTTGCCGAAGGAAACTATGAAGGGATGGTTAAAAAGTGAAAGGAAATTCTGATTGAGATGGTTTCTCACGTTAACCCACAGGGAATGATCATGAATTTGCTCATTGGGTTGGTATGAGGCCTTTTGGAAAAGCTCAAGAACCATATGAAGTTTTTGGAAAAGCTTAAAGACCATATGAAGCCTTTTGGGAAAGCTCAAAGTAAAACTTTGAAAGCTTATACTCAAAGTGGACAATATCATACCAGACGTAATGTTAGAAATATTGGTTCCGGTAGGGATTACGAGTATTTGGTCTCAGGGAATTGAGTGTAAGACTAGTAGGTGGAAAAGAAAAGAAGGAACACACAAAAGAGGATAAGACGATAATGAAGTGAATAAGTGGCGGTCTTCTCTTGTCGCATTATCATTATCGAGAATCCCACTTTTACCAATTCTGTATGTTCTTTCTTCTCATCTTTTTAAACTAGCAAAATTAAACGTAATAGTTAGCCATATGATGTTGGTCATCTGTAAATCGTTCCACTCACGCCACGCTTCTTAGTTTTTTTGTTTGGTAATGTTGCGTGTCTCCAATTTATCATCTTAGCAGCCATAATAATGATAACTATAACAACAATTTAAGACTAAACATGTTTTTTAGGAACTGTATATTATTTTATGGTCAACATTACGAAGTTATCTGATTTTTGTTGTGATCATTTTGAACTGTAATAGGTGGGCAGAGAAGGACCAGGAAGTTCACCCACCCATCACCATTCTTATGAGGTATGAGTTCTTTTCTAAGTCTCTAAACTTTAGAATATTCTCCATCTTTGTGAAGTCTTTATCTTCCTTTCCTATTTCTTGTAGACCTCAACCCCACACATTACGCGTCCGACACTGACCCTCTTCAATTCTCCTTTTCATTTTTCTAGTACCAAAATTCCCACCAAAAAGCCACCCAATCTCAATCCTGTGTCCCAATGTTCACTCCACACACACACACGCACAGCGATTGCGACAACTAAAAAAGAACCCATGAAATTATGGGACTCCTGAAATCTGTTTGGTTCACTCACTGTGATCTGAAACTAAAACCCCACTTAGAGAGACTTTTCAAGGGCTTTGGGCTGTATATTTGGGCTTTAATTGTCCGCTTTTTAGTGGGCCTTTAATCCTCTGGTCCAATTTTCAAGCCCATTCATAATGCATGTAGGCCCAACACACCTTTTGAACACCTGAAAATTCTATAATTGATATAAAAATATAACAAAAATAGTAACTAAGAAGTTAACTTAAACATTTTAAACATACCCACAAAAATCACATACATATCCATGACCTTTTAGTTGAGTCGAAAATATATACCTAAACTTTGTTAGACAAACACAACTCTCCACAGTGAGATGATATTGTCCGCTTTGAGCATAAGCTCTCATAGCTTGGCCGCTTTGAGCATAAGCTCTCATAGCTTTGTTTTGGGTTTTCCAAAAGGTGAGATGATATTGTCCGCTTTGAGCATAAGCTCTCATAGCTTTGTTTTGGGTTCTCCAAAAGGTTCCATACCAATTGAGAGAGTATTCTTTAATTATAAACCTATTATCTTTCCCTAAATTAGCTGATGAACCGATGTGGGACTTTTATCATCCAACAAACTTGTCGGACAGAAAAAAAAGAAAGAAAAAAGAAACACAAAACTATATCATGAGTTATGTAAATAGTTGCCTCATTACAAAATTTCCAAGGACAACGTTGTTTTAGTTGCATTGGCATTTAAATCAAATGCACATATCACATAAAAACAACCTTAAAATAAATAAAGGGATTCAAGTGGGCTTCATGTCATAGAACAATGAAACCCACAATGAGTGATAATCATCGTCGGTTTCCATCCTCTCTCTATTACAACGACAGCAAATTTTTGGGCTTCCATCTCGTCCATCCAGCGGCCCAGATACTCTTGGGCTCCGGCTCGGTGGTATCAGCCTCATCATTCTCCCCTGCGGCGGTCCATTCAGCTTTGGGCTTCTACTCGAGGCCCAATCAGATACTCTCCCATCCAGAGGCCCAGATGACCTTGGGCTTCTTGGAAACATGGGCCTCTCTTTCCTATCCAACGGCCCAGATAGCTTTAGGCTTTTACTGTTCGTCATTAACTTCTCGTGCGTTCTCCCGTCCAACGGCCCGGACAGCGACACGTGTTTACTGCGTCGTTTCGGCGGCTTGAGCACCTCCTTAACCTCCAGTTTCCGGCTGAGATCCTCGCTGTAGGTAATCGGCTCTGGGGAAATCACCGCCGCGTCTTCCCGGAAAATCCCCTTCTCCGACTTGGCGTTGGTGAAAATAAGCTTCCTGAGGCAGTTCCGGAGGCAGTTCTTGGTCTTGGCGAAAGCGGAAAGGAGCAATTTCTTTTGGGTGGCTTCTTCTCTGTCGCATTTGGCGAGTTTCAGAATCTCGAGCCTGTGTTTGGCGATGGAAACTCCGATTTTCTGGAGAAAATCGTGGTTGAAACGAGGAATGTCTTCGGGTCTGAGGCCATTTCGGGCGAAAACGAGGCCATATTCGTAAGTGTGAAGTGGGTCGAGGCCAGTTCTTGAGAGCCAAGAGAACCAGTCCATCGGAGGTGGCCGACCAAGCTGAGAAATGCTCAAGAGTTTGGAAATTGTGACGTACATATATAGCGTGAGAGAGAGAGAGAGAGAGGGGAGGAGAGTGCAAAAAAAAAATAATAATAATAATAACAATAATAATAATTAAATGCGACCGGCTCCGCTCTTTTATTCTCGTCAATTATACATACATAAAATATTAATTATTTTAAAAATTCATAAATAAATTTATATATTTATATATAATGGATTAATTTTTTTGAATTTATTACCTTAAAGGGTAAAAAAATTGATGGTAAAATTAAATGGACCACAATAATAATTTCAGATGAGAGTGAGGGAAAGAGAGGGATATGGTGTAAAGATCCGTTGCTTTCGGTATGGATCAATTATTTATGTAATTTTGGAAGTATTTTGAACGTTGTATTACCATTATGTCCTCTTTAGTTTAGTTTTTTTCTTTTCTTCTTCTT

mRNA sequence

ATGGCGGTTTCTTCTAGAAGATCGAGCGGGCCTGTTATGAGGTCTCTCTCACCTTCTGGGAGATTCTGTGGCTCCTATTCTTCTTCTTCGTCTTCGTCTCCGTCTTCTTCGTCATCGGCGTTTGCGTCTTCCACATCAAGCTTTTCCACTGAAAACCCTACTTCGTTTTTCCGTAGATCTCTGTCTCCGTCTCGTGTTCATCTACAAGGTTCTTCTTCTTCTACGTCGGCGTCGTCCGTGAGATTTGCACTGGACCGGTCTATTTCTCCGAATCGGCATATCTCTGTTTTGACTCGTGGCGGTGGGAATCAAGTAGTGAAGAGGCAGAGCAACCAGAAGAGGACGTGCTTGTGCTCTCCGACCACGCATCCTGGTTCGTTTCGGTGTAGTCTCCATAAAGGCGTTCCGTCGCAGCCTACGACTCCTTACTCGTCTAATCGACTCAACGCGCGGAGATCGGCGATGACGAACTCTTTGAACACCTATGTTTGTTATTTTGTTCAACGTACACGTCTCCTTCCTTCTGCTGTCGCCTCCGTTCATGGTGGCCGTGAAATTGAAGCCGGTAATTTACGCATTCATGCTTGCCGTACTCCGTTTTGTCAATCGGATGATTTCTTAAAGATGCATTTGAAGGTTGAAACCTAAGAGCTCTGATTTTGAACTGTGAATTTTGTGATCTGAAAGTAAATTCAGGTGGAGATGATTCAAATTTGAATGAAGTTATGAACTAAGACAGACGATGGAATTCTTGACAGCGACTGAACAATTATAATTGGAATTAATTGGAAACAAATCCTGGAATTCAAAAAGGTAAATAACATCAGAGCTGAGATGAAGTTAGAATGGAATAGAAAAGAATCGAATGAAACATTGAATGGTAGGGTAACTCGGTGGTGCGGTGGAGTGGATGGTTGACCTGTCAAGGCTCAAATGGGTGGAAGGAACCGACTGCTATCTGCCTATGAAAAACCAATCCAAATCCCTATTGATTGTTCATAAAACTATTCAATGGAAGAATGCCCCTTTGAGAGATGAAGAGCTGCCTATGTCAGGAGATGTTACATCTTTTTTGCCGAAGGAAACTATGAAGGGATGGTTAAAAAGTGAAAGGAAATTCTGATTGAGATGGTTTCTCACGTTAACCCACAGGGAATGATCATGAATTTGCTCATTGGGTTGGTATGAGGCCTTTTGGAAAAGCTCAAGAACCATATGAAGTTTTTGGAAAAGCTTAAAGACCATATGAAGCCTTTTGGGAAAGCTCAAAGTAAAACTTTGAAAGCTTATACTCAAAGTGGACAATATCATACCAGACGTAATGTTAGAAATATTGGTTCCGGTAGGGATTACGAGTATTTGGTCTCAGGGAATTGAGTGTAAGACTAGTAGGTGGAAAAGAAAAGAAGGAACACACAAAAGAGGATAAGACGATAATGAAGTGAATAAGTGGCGGTCTTCTCTTGTCGCATTATCATTATCGAGAATCCCACTTTTACCAATTCTGTATGTTCTTTCTTCTCATCTTTTTAAACTAGCAAAATTAAACGTAATAGTTAGCCATATGATGTTGGTCATCTGTAAATCGTTCCACTCACGCCACGCTTCTTAGTTTTTTTGTTTGGTAATGTTGCGTGTCTCCAATTTATCATCTTAGCAGCCATAATAATGATAACTATAACAACAATTTAAGACTAAACATGTTTTTTAGGAACTGTATATTATTTTATGGTCAACATTACGAAGTTATCTGATTTTTGTTGTGATCATTTTGAACTGTAATAGGTGGGCAGAGAAGGACCAGGAAGTTCACCCACCCATCACCATTCTTATGAGGTATGAGTTCTTTTCTAAGTCTCTAAACTTTAGAATATTCTCCATCTTTGTGAAGTCTTTATCTTCCTTTCCTATTTCTTGTAGACCTCAACCCCACACATTACGCGTCCGACACTGACCCTCTTCAATTCTCCTTTTCATTTTTCTAGTACCAAAATTCCCACCAAAAAGCCACCCAATCTCAATCCTGTGTCCCAATGTTCACTCCACACACACACACGCACAGCGATTGCGACAACTAAAAAAGAACCCATGAAATTATGGGACTCCTGAAATCTGTTTGGTTCACTCACTGTGATCTGAAACTAAAACCCCACTTAGAGAGACTTTTCAAGGGCTTTGGGCTGTATATTTGGGCTTTAATTGTCCGCTTTTTAGTGGGCCTTTAATCCTCTGGTCCAATTTTCAAGCCCATTCATAATGCATGTAGGCCCAACACACCTTTTGAACACCTGAAAATTCTATAATTGATATAAAAATATAACAAAAATAGTAACTAAGAAGTTAACTTAAACATTTTAAACATACCCACAAAAATCACATACATATCCATGACCTTTTAGTTGAGTCGAAAATATATACCTAAACTTTGTTAGACAAACACAACTCTCCACAGTGAGATGATATTGTCCGCTTTGAGCATAAGCTCTCATAGCTTGGCCGCTTTGAGCATAAGCTCTCATAGCTTTGTTTTGGGTTTTCCAAAAGGTGAGATGATATTGTCCGCTTTGAGCATAAGCTCTCATAGCTTTGTTTTGGGTTCTCCAAAAGGTTCCATACCAATTGAGAGAGTATTCTTTAATTATAAACCTATTATCTTTCCCTAAATTAGCTGATGAACCGATGTGGGACTTTTATCATCCAACAAACTTGTCGGACAGAAAAAAAAGAAAGAAAAAAGAAACACAAAACTATATCATGAGTTATGTAAATAGTTGCCTCATTACAAAATTTCCAAGGACAACGTTGTTTTAGTTGCATTGGCATTTAAATCAAATGCACATATCACATAAAAACAACCTTAAAATAAATAAAGGGATTCAAGTGGGCTTCATGTCATAGAACAATGAAACCCACAATGAGTGATAATCATCGTCGGTTTCCATCCTCTCTCTATTACAACGACAGCAAATTTTTGGGCTTCCATCTCGTCCATCCAGCGGCCCAGATACTCTTGGGCTCCGGCTCGGTGGTATCAGCCTCATCATTCTCCCCTGCGGCGGTCCATTCAGCTTTGGGCTTCTACTCGAGGCCCAATCAGATACTCTCCCATCCAGAGGCCCAGATGACCTTGGGCTTCTTGGAAACATGGGCCTCTCTTTCCTATCCAACGGCCCAGATAGCTTTAGGCTTTTACTGTTCGTCATTAACTTCTCGTGCGTTCTCCCGTCCAACGGCCCGGACAGCGACACGTGTTTACTGCGTCGTTTCGGCGGCTTGAGCACCTCCTTAACCTCCAGTTTCCGGCTGAGATCCTCGCTGTAGGTAATCGGCTCTGGGGAAATCACCGCCGCGTCTTCCCGGAAAATCCCCTTCTCCGACTTGGCGTTGGTGAAAATAAGCTTCCTGAGGCAGTTCCGGAGGCAGTTCTTGGTCTTGGCGAAAGCGGAAAGGAGCAATTTCTTTTGGGTGGCTTCTTCTCTGTCGCATTTGGCGAGTTTCAGAATCTCGAGCCTGTGTTTGGCGATGGAAACTCCGATTTTCTGGAGAAAATCGTGGTTGAAACGAGGAATGTCTTCGGGTCTGAGGCCATTTCGGGCGAAAACGAGGCCATATTCGTAAGTGTGAAGTGGGTCGAGGCCAGTTCTTGAGAGCCAAGAGAACCAGTCCATCGGAGGTGGCCGACCAAGCTGAGAAATGCTCAAGAGTTTGGAAATTGTGACGTACATATATAGCGTGAGAGAGAGAGAGAGAGAGGGGAGGAGAGTGCAAAAAAAAAATAATAATAATAATAACAATAATAATAATTAAATGCGACCGGCTCCGCTCTTTTATTCTCGTCAATTATACATACATAAAATATTAATTATTTTAAAAATTCATAAATAAATTTATATATTTATATATAATGGATTAATTTTTTTGAATTTATTACCTTAAAGGGTAAAAAAATTGATGGTAAAATTAAATGGACCACAATAATAATTTCAGATGAGAGTGAGGGAAAGAGAGGGATATGGTGTAAAGATCCGTTGCTTTCGGTATGGATCAATTATTTATGTAATTTTGGAAGTATTTTGAACGTTGTATTACCATTATGTCCTCTTTAGTTTAGTTTTTTTCTTTTCTTCTTCTT

Coding sequence (CDS)

ATGGCGGTTTCTTCTAGAAGATCGAGCGGGCCTGTTATGAGGTCTCTCTCACCTTCTGGGAGATTCTGTGGCTCCTATTCTTCTTCTTCGTCTTCGTCTCCGTCTTCTTCGTCATCGGCGTTTGCGTCTTCCACATCAAGCTTTTCCACTGAAAACCCTACTTCGTTTTTCCGTAGATCTCTGTCTCCGTCTCGTGTTCATCTACAAGGTTCTTCTTCTTCTACGTCGGCGTCGTCCGTGAGATTTGCACTGGACCGGTCTATTTCTCCGAATCGGCATATCTCTGTTTTGACTCGTGGCGGTGGGAATCAAGTAGTGAAGAGGCAGAGCAACCAGAAGAGGACGTGCTTGTGCTCTCCGACCACGCATCCTGGTTCGTTTCGGTGTAGTCTCCATAAAGGCGTTCCGTCGCAGCCTACGACTCCTTACTCGTCTAATCGACTCAACGCGCGGAGATCGGCGATGACGAACTCTTTGAACACCTATGTTTGTTATTTTGTTCAACGTACACGTCTCCTTCCTTCTGCTGTCGCCTCCGTTCATGGTGGCCGTGAAATTGAAGCCGGTAATTTACGCATTCATGCTTGCCGTACTCCGTTTTGTCAATCGGATGATTTCTTAAAGATGCATTTGAAGGTTGAAACCTAA

Protein sequence

MAVSSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFRRSLSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSPTTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSLNTYVCYFVQRTRLLPSAVASVHGGREIEAGNLRIHACRTPFCQSDDFLKMHLKVET
BLAST of Cp4.1LG18g05350 vs. TrEMBL
Match: A0A0A0LW36_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G264020 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.8e-54
Identity = 133/160 (83.12%), Postives = 142/160 (88.75%), Query Frame = 1

Query: 1   MAVSSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFRRS 60
           MAVSSR+SSGPV+RSLSPSGRF GS SS SSSS    SSAFASSTSSFST N TSFF RS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSS----SSAFASSTSSFSTRNATSFFPRS 60

Query: 61  LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGN-QVVKRQSNQKRTCLCS 120
           +SPSRV+LQG SSS SASSVRF+LDRSISPNR ISVL+R  GN QVVK+QS QKRTC+CS
Sbjct: 61  VSPSRVNLQG-SSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCS 120

Query: 121 PTTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL 160
           PTTHPGSFRCSLHKGV SQP+TPYSSNRLNARRSAMTNSL
Sbjct: 121 PTTHPGSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSL 155

BLAST of Cp4.1LG18g05350 vs. TrEMBL
Match: A0A0A0LL69_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009440 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 7.0e-40
Identity = 107/161 (66.46%), Postives = 124/161 (77.02%), Query Frame = 1

Query: 1   MAVSSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFRRS 60
           MA +SRRSS  V+RSLSPSGRF G  +SSSS        AFASSTS+FS+ + TSFF RS
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSSSS--------AFASSTSTFSSRSATSFFCRS 60

Query: 61  LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTR--GGGNQVVKRQSNQKRTCLC 120
            SPSRV+L GS S  S  SVRF+LDR+ SPNR +SV +   GG N+VV+RQS+ KRTC+C
Sbjct: 61  TSPSRVNLHGSPS-VSVPSVRFSLDRATSPNRSVSVSSSRSGGTNRVVQRQSSTKRTCMC 120

Query: 121 SPTTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL 160
           SPTTHPGSFRCSLHKG+ SQP   YS +RLNARRSAMTNSL
Sbjct: 121 SPTTHPGSFRCSLHKGIISQPPALYSPSRLNARRSAMTNSL 152

BLAST of Cp4.1LG18g05350 vs. TrEMBL
Match: B7FGS5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.0e-35
Identity = 111/163 (68.10%), Postives = 123/163 (75.46%), Query Frame = 1

Query: 1   MAVSSRRS-SGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFRR 60
           MA +SR+S +  V+RSLSPS RFC S  S S  S SSSS+AFASSTSSF T   TSFFR 
Sbjct: 1   MAAASRKSRTNTVLRSLSPSPRFCNSQDSPSHYS-SSSSTAFASSTSSF-TSRSTSFFRA 60

Query: 61  SLSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQ--KRTCL 120
           S SP+RV L G  SS SASSVRF+LDRSISPNR IS + R G    VK+QS+   KRTC+
Sbjct: 61  STSPTRVSLYG--SSPSASSVRFSLDRSISPNRSISAVPRTG----VKKQSSSQPKRTCM 120

Query: 121 CSPTTHPGSFRCSLHKGVPSQ-PTTPYSSNRLNARRSAMTNSL 160
           CSPTTHPGSFRCSLHKG  S+   TPYS NRLNARRSAMTNSL
Sbjct: 121 CSPTTHPGSFRCSLHKGFGSRAAVTPYSQNRLNARRSAMTNSL 155

BLAST of Cp4.1LG18g05350 vs. TrEMBL
Match: I3SMU6_MEDTR (Plant/F18G18-20 protein OS=Medicago truncatula GN=MTR_4g116277 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.0e-35
Identity = 111/163 (68.10%), Postives = 123/163 (75.46%), Query Frame = 1

Query: 1   MAVSSRRS-SGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFRR 60
           MA +SR+S +  V+RSLSPS RFC S  S S  S SSSS+AFASSTSSF T   TSFFR 
Sbjct: 1   MAAASRKSRTNTVLRSLSPSPRFCNSQDSPSHYS-SSSSTAFASSTSSF-TSRSTSFFRA 60

Query: 61  SLSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQ--KRTCL 120
           S SP+RV L G  SS SASSVRF+LDRSISPNR IS + R G    VK+QS+   KRTC+
Sbjct: 61  STSPTRVSLYG--SSPSASSVRFSLDRSISPNRSISAVPRTG----VKKQSSSQPKRTCM 120

Query: 121 CSPTTHPGSFRCSLHKGVPSQ-PTTPYSSNRLNARRSAMTNSL 160
           CSPTTHPGSFRCSLHKG  S+   TPYS NRLNARRSAMTNSL
Sbjct: 121 CSPTTHPGSFRCSLHKGFGSRAAVTPYSQNRLNARRSAMTNSL 155

BLAST of Cp4.1LG18g05350 vs. TrEMBL
Match: I3SY62_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.0e-34
Identity = 109/163 (66.87%), Postives = 121/163 (74.23%), Query Frame = 1

Query: 1   MAVSSRRS-SGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFRR 60
           MA +SR+S +  V+RSLSPS RFC S  S S  S  SSS+AFASSTSSF T   TSFFR 
Sbjct: 1   MAAASRKSRTNTVLRSLSPSPRFCNSQDSPSHYS--SSSTAFASSTSSF-TSRSTSFFRA 60

Query: 61  SLSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQ--KRTCL 120
           S SP+RV L G  SS SASSVRF+LDRSISPNR IS + R G    VK+QS+   KRTC+
Sbjct: 61  STSPTRVSLYG--SSPSASSVRFSLDRSISPNRSISAVPRTG----VKKQSSSQPKRTCM 120

Query: 121 CSPTTHPGSFRCSLHKGVPSQ-PTTPYSSNRLNARRSAMTNSL 160
           CSPTTHPGSFRCSLHKG  S+   TPYS NR NARRSAMTNSL
Sbjct: 121 CSPTTHPGSFRCSLHKGFGSRAAVTPYSQNRFNARRSAMTNSL 154

BLAST of Cp4.1LG18g05350 vs. TAIR10
Match: AT5G11090.1 (AT5G11090.1 serine-rich protein-related)

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-25
Identity = 89/173 (51.45%), Postives = 108/173 (62.43%), Query Frame = 1

Query: 4   SSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFF------ 63
           S  +S+GPV+RS SPSGRFCG YS +    PSSSSSAFASSTSS  +   ++FF      
Sbjct: 6   SRTKSNGPVLRSQSPSGRFCGGYSRAV---PSSSSSAFASSTSSSFSSPSSAFFSNHRHH 65

Query: 64  ------RRSLSPSRVHLQGSSSSTSASSVRFALD-RSISP-NRHISVLTRGGGNQVVKRQ 123
                  RS SP+RV+L   ++   + S R++LD RSISP N+ ISV      NQ     
Sbjct: 66  ESNHSHHRSASPTRVNLY--TAQPMSQSFRYSLDSRSISPTNKSISV----SKNQPPSHN 125

Query: 124 SNQKRTCLCSPTTHPGSFRCSLHKGVPS---QPTTPYSSNRLNARRSAMTNSL 160
               R C+CSPTTHPGSFRCSLHK V +   Q T  Y++N LN RRSAMTNSL
Sbjct: 126 HKISRRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSL 169

BLAST of Cp4.1LG18g05350 vs. TAIR10
Match: AT5G25280.1 (AT5G25280.1 serine-rich protein-related)

HSP 1 Score: 108.2 bits (269), Expect = 6.3e-24
Identity = 88/177 (49.72%), Postives = 111/177 (62.71%), Query Frame = 1

Query: 1   MAVSSRRSS----GPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSF 60
           MA++S R++       +RS SPSGRFCG YS+   SS S SSS FASSTSS  +   T+F
Sbjct: 1   MAITSSRTTRSNGSASLRSKSPSGRFCGVYSNRMPSS-SPSSSGFASSTSSSFSSPSTAF 60

Query: 61  F----------RRSLSPSRVHLQGSSSSTSASSVRFALD-RSISPNRHISVLTRGGGNQV 120
           F           RS SP+RV+L  S+  T   S R+++D RSISPNR I+V +    N  
Sbjct: 61  FSSHNQNNHHQHRSASPTRVNLFTSAPMTQ--SFRYSIDNRSISPNRSIAVSSNKPSNH- 120

Query: 121 VKRQSNQKRTCLCSPTTHPGSFRCSLHKGVPS---QPTTPYSSNRLNARRSAMTNSL 160
             +  + +R C+CSPTTHPGSFRCSLHK V +   Q T  Y++N LN RRSAMTNSL
Sbjct: 121 -HKIPDSRRRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSL 172

BLAST of Cp4.1LG18g05350 vs. TAIR10
Match: AT1G67910.1 (AT1G67910.1 unknown protein)

HSP 1 Score: 48.9 bits (115), Expect = 4.5e-06
Identity = 21/48 (43.75%), Postives = 28/48 (58.33%), Query Frame = 1

Query: 93  HISVLTRGGGNQVVKRQSNQKRTCLCSPTTHPGSFRCSLHKGVPSQPT 141
           H +     G   + ++ S  K  CLCSPTTHPGSFRC +H+ +  Q T
Sbjct: 21  HFNSAVEVGSRGLSRQTSMTKTNCLCSPTTHPGSFRCRIHRSLSLQRT 68

BLAST of Cp4.1LG18g05350 vs. TAIR10
Match: AT3G13227.1 (AT3G13227.1 serine-rich protein-related)

HSP 1 Score: 48.5 bits (114), Expect = 5.9e-06
Identity = 18/34 (52.94%), Postives = 26/34 (76.47%), Query Frame = 1

Query: 100 GGGNQVVKRQSNQKRTCLCSPTTHPGSFRCSLHK 134
           GGG+  + + S+ ++ CLC+PTTHPGSFRC  H+
Sbjct: 49  GGGSVGMSKSSSVRQNCLCAPTTHPGSFRCRYHR 82

BLAST of Cp4.1LG18g05350 vs. NCBI nr
Match: gi|449457949|ref|XP_004146710.1| (PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 5.5e-54
Identity = 133/160 (83.12%), Postives = 142/160 (88.75%), Query Frame = 1

Query: 1   MAVSSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFRRS 60
           MAVSSR+SSGPV+RSLSPSGRF GS SS SSSS    SSAFASSTSSFST N TSFF RS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSS----SSAFASSTSSFSTRNATSFFPRS 60

Query: 61  LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGN-QVVKRQSNQKRTCLCS 120
           +SPSRV+LQG SSS SASSVRF+LDRSISPNR ISVL+R  GN QVVK+QS QKRTC+CS
Sbjct: 61  VSPSRVNLQG-SSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCS 120

Query: 121 PTTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL 160
           PTTHPGSFRCSLHKGV SQP+TPYSSNRLNARRSAMTNSL
Sbjct: 121 PTTHPGSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSL 155

BLAST of Cp4.1LG18g05350 vs. NCBI nr
Match: gi|659086409|ref|XP_008443919.1| (PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis melo])

HSP 1 Score: 217.2 bits (552), Expect = 2.7e-53
Identity = 132/160 (82.50%), Postives = 143/160 (89.38%), Query Frame = 1

Query: 1   MAVSSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFRRS 60
           MAVSSR+SSGPV+RSLSPSGRF GS SS SSSS    SSAFASSTSSFST + TSFFRRS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSS----SSAFASSTSSFSTTDHTSFFRRS 60

Query: 61  LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGN-QVVKRQSNQKRTCLCS 120
           +SPSRV+LQG SSS SASSVRF+LDRSISPNR ISVL+R  GN QVVK+QS+QKRTC+CS
Sbjct: 61  VSPSRVNLQG-SSSPSASSVRFSLDRSISPNRPISVLSRATGNHQVVKKQSHQKRTCMCS 120

Query: 121 PTTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL 160
           PTTHPGSFRCSLHKGV S P+TPYSSNRLNARRSAMTNSL
Sbjct: 121 PTTHPGSFRCSLHKGVQSHPSTPYSSNRLNARRSAMTNSL 155

BLAST of Cp4.1LG18g05350 vs. NCBI nr
Match: gi|700205637|gb|KGN60756.1| (hypothetical protein Csa_2G009440 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 1.0e-39
Identity = 107/161 (66.46%), Postives = 124/161 (77.02%), Query Frame = 1

Query: 1   MAVSSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFRRS 60
           MA +SRRSS  V+RSLSPSGRF G  +SSSS        AFASSTS+FS+ + TSFF RS
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSSSS--------AFASSTSTFSSRSATSFFCRS 60

Query: 61  LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTR--GGGNQVVKRQSNQKRTCLC 120
            SPSRV+L GS S  S  SVRF+LDR+ SPNR +SV +   GG N+VV+RQS+ KRTC+C
Sbjct: 61  TSPSRVNLHGSPS-VSVPSVRFSLDRATSPNRSVSVSSSRSGGTNRVVQRQSSTKRTCMC 120

Query: 121 SPTTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL 160
           SPTTHPGSFRCSLHKG+ SQP   YS +RLNARRSAMTNSL
Sbjct: 121 SPTTHPGSFRCSLHKGIISQPPALYSPSRLNARRSAMTNSL 152

BLAST of Cp4.1LG18g05350 vs. NCBI nr
Match: gi|1012001517|ref|XP_015932372.1| (PREDICTED: uncharacterized protein LOC107458662 [Arachis duranensis])

HSP 1 Score: 167.5 bits (423), Expect = 2.5e-38
Identity = 108/162 (66.67%), Postives = 121/162 (74.69%), Query Frame = 1

Query: 1   MAVSSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFRRS 60
           MAV+SR+   PV+RSLSPS RFC +  +S S SPS SSS FASS+SSF T   T+FF R+
Sbjct: 1   MAVTSRKPRAPVLRSLSPSPRFCNN--NSHSPSPSYSSSGFASSSSSF-TSRSTTFFHRA 60

Query: 61  LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSP 120
            SP+RV+L G S S SASSVRF+LDRSISPNR ISV  R G    VKRQ  QKRTC+CSP
Sbjct: 61  TSPTRVNLCGPS-SASASSVRFSLDRSISPNRSISVAPRTGAPTTVKRQGQQKRTCMCSP 120

Query: 121 TTHPGSFRCSLHKGVPSQ---PTTPYSSNRLNARRSAMTNSL 160
           TTHPGSFRCSLHKG  +       PYS NRLNARRSAMTNSL
Sbjct: 121 TTHPGSFRCSLHKGFSASSHAAAAPYSPNRLNARRSAMTNSL 158

BLAST of Cp4.1LG18g05350 vs. NCBI nr
Match: gi|1009110112|ref|XP_015893789.1| (PREDICTED: uncharacterized protein LOC107427897 [Ziziphus jujuba])

HSP 1 Score: 167.5 bits (423), Expect = 2.5e-38
Identity = 114/165 (69.09%), Postives = 124/165 (75.15%), Query Frame = 1

Query: 1   MAVSSRRSS--GPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFR 60
           MA SSRRSS  GP  RSLSPSGRF     SS SSS SSS+SAFASSTSSFS+ + T F  
Sbjct: 1   MAASSRRSSASGPGPRSLSPSGRFY----SSRSSSHSSSASAFASSTSSFSSRSAT-FLH 60

Query: 61  RSLSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRG---GGNQVVKRQSNQKRT 120
           RS SP RV++ G   S  ASS+RF++DR ISPNR ISV  RG   G NQVVKRQ NQKRT
Sbjct: 61  RSASPPRVNMYG--PSPPASSIRFSMDRPISPNRSISVTPRGNGNGNNQVVKRQINQKRT 120

Query: 121 CLCSPTTHPGSFRCSLHKGV-PSQPTTPYSSNRLNARRSAMTNSL 160
           C+CSPTTHPGSFRCSLHKG   S  + PYS NRLNARRSAMTNSL
Sbjct: 121 CMCSPTTHPGSFRCSLHKGFGSSHSSVPYSPNRLNARRSAMTNSL 158

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LW36_CUCSA3.8e-5483.13Uncharacterized protein OS=Cucumis sativus GN=Csa_1G264020 PE=4 SV=1[more]
A0A0A0LL69_CUCSA7.0e-4066.46Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009440 PE=4 SV=1[more]
B7FGS5_MEDTR3.0e-3568.10Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1[more]
I3SMU6_MEDTR3.0e-3568.10Plant/F18G18-20 protein OS=Medicago truncatula GN=MTR_4g116277 PE=2 SV=1[more]
I3SY62_MEDTR2.0e-3466.87Uncharacterized protein OS=Medicago truncatula PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT5G11090.11.1e-2551.45 serine-rich protein-related[more]
AT5G25280.16.3e-2449.72 serine-rich protein-related[more]
AT1G67910.14.5e-0643.75 unknown protein[more]
AT3G13227.15.9e-0652.94 serine-rich protein-related[more]
Match NameE-valueIdentityDescription
gi|449457949|ref|XP_004146710.1|5.5e-5483.13PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis sativus][more]
gi|659086409|ref|XP_008443919.1|2.7e-5382.50PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis melo][more]
gi|700205637|gb|KGN60756.1|1.0e-3966.46hypothetical protein Csa_2G009440 [Cucumis sativus][more]
gi|1012001517|ref|XP_015932372.1|2.5e-3866.67PREDICTED: uncharacterized protein LOC107458662 [Arachis duranensis][more]
gi|1009110112|ref|XP_015893789.1|2.5e-3869.09PREDICTED: uncharacterized protein LOC107427897 [Ziziphus jujuba][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG18g05350.1Cp4.1LG18g05350.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33132FAMILY NOT NAMEDcoord: 27..160
score: 5.3
NoneNo IPR availablePANTHERPTHR33132:SF12SUBFAMILY NOT NAMEDcoord: 27..160
score: 5.3

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG18g05350Cucurbita pepo (Zucchini)cpecpeB356
Cp4.1LG18g05350Cucurbita pepo (Zucchini)cpecpeB113
Cp4.1LG18g05350Cucurbita pepo (Zucchini)cpecpeB115
Cp4.1LG18g05350Cucurbita pepo (Zucchini)cpecpeB360
Cp4.1LG18g05350Cucurbita pepo (Zucchini)cpecpeB370
Cp4.1LG18g05350Cucumber (Gy14) v1cgycpeB0352
Cp4.1LG18g05350Cucurbita maxima (Rimu)cmacpeB038
Cp4.1LG18g05350Cucurbita maxima (Rimu)cmacpeB080
Cp4.1LG18g05350Cucurbita maxima (Rimu)cmacpeB132
Cp4.1LG18g05350Cucurbita maxima (Rimu)cmacpeB474
Cp4.1LG18g05350Cucurbita maxima (Rimu)cmacpeB775
Cp4.1LG18g05350Cucurbita moschata (Rifu)cmocpeB013
Cp4.1LG18g05350Cucurbita moschata (Rifu)cmocpeB055
Cp4.1LG18g05350Cucurbita moschata (Rifu)cmocpeB432
Cp4.1LG18g05350Cucurbita moschata (Rifu)cmocpeB730
Cp4.1LG18g05350Wild cucumber (PI 183967)cpecpiB351
Cp4.1LG18g05350Cucumber (Chinese Long) v2cpecuB350
Cp4.1LG18g05350Bottle gourd (USVL1VR-Ls)cpelsiB297
Cp4.1LG18g05350Bottle gourd (USVL1VR-Ls)cpelsiB300
Cp4.1LG18g05350Bottle gourd (USVL1VR-Ls)cpelsiB308
Cp4.1LG18g05350Watermelon (Charleston Gray)cpewcgB334
Cp4.1LG18g05350Watermelon (Charleston Gray)cpewcgB335
Cp4.1LG18g05350Watermelon (97103) v1cpewmB362
Cp4.1LG18g05350Watermelon (97103) v1cpewmB372
Cp4.1LG18g05350Melon (DHL92) v3.5.1cpemeB343
Cp4.1LG18g05350Melon (DHL92) v3.5.1cpemeB334
Cp4.1LG18g05350Melon (DHL92) v3.6.1cpemedB392
Cp4.1LG18g05350Silver-seed gourdcarcpeB0818
Cp4.1LG18g05350Cucumber (Chinese Long) v3cpecucB0429
Cp4.1LG18g05350Cucumber (Chinese Long) v3cpecucB0460
Cp4.1LG18g05350Wax gourdcpewgoB0466
Cp4.1LG18g05350Wax gourdcpewgoB0454