Cp4.1LG18g05240 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAAGCTTCCGTGGCAGTGGATCAGTGTCAATACGACGCCGTAAAGTGAGTTTACGAAGACACCACTTTCTTCTTCCTCTCGTCGTGGCCGTCGTCGTCCTTTCGCTCCCAGCTGGTAATTCCTCACCCTTCCAGTTTGCTTCCCTCGTTTTCACCATTGTGAGTTCGTTTGAGGACACAGAGATGAGGGAATTTATGTGGCTGGTTCTTATAGCTGGTAGTTTTTGCTACTCTGCGTTTGCTGACCAGATCTTCCCAGCTCAATTAGGTGAAGTTCTTCTCCTCGTCTTTTCTCTCTTGAATTTTTTCATGAAATGTTTCAAAATAAATGTCTGTTTTATGCGTACAATCTCGATTGATGAATTTGTGATATGGTTATTATTTATTTATTTTTGTTTTGAATTCAGTATTTAGAAATGGTTTTCTGTCTATCTTACTTTTTAATGAGTTTTGAGTCTTTTGCTTCCGATTGATTGAGGACATGATGCTTGGATTCCGAAGGATAATGCTGGTGGTGGGAGGTTCTTTTGAACTTATTGATGATTATTGGATCAATTGATGGCTTATTAGCAATGATCGTTTTGAGTTGTGATTGCGATTATTTGTAGAAGTCGTGGGGATTGCCGTGATTTTGAAGGGATAGATATCCATTTCAGAATAAAATGATTTTCTATTTTTAAATTTCAGAAGTAAAATCCAGTTCTTAAATTCATTTCTCAAACCATGTTTGATTGAATTGTGGGCAGTTGCTTAGATAATAAGTGTCACATATGGGAATAGGTGAACTCTGAAATCTAAATCGTAGAATTTCGTCCCACCGGAGGCTGATATTTCATAGGTTGTTGAACACAACTTGAAACCTCAAAATGTAGTGCGTTGAACCATCTTTACATTTATGACTTTTGCGTATTGTGACAATAACTTATCAGTATGAAATATTATTATTCGTTCTTTCTGATTGATGATAAGCAGGTGGTACATTTAGTCGCAACTCTCGTGGGCCAAAATACAATATTGAATTCCATCCAGAAGACTCGCCTTACAATCCGGTAAGCTTTATGTACTTAGTTGTTGATTCTTGATACTAACAGAATTTTTTTTTTTATAAGAGTCAATTTCATTGATGATTGAAATTTACAAAAGGATGTAATATCCATGATGTTTACAAAAAAGACCTTCTCAATTGACAATGAGGGAGGTATAAATATAGGAAGTAAAAATATCATACCGTTTACACCAAGATTTGTTGAAAAGTTTTGTATAACAAGATTCTACTCGCGATGTCGAAAAATTCTTATGACTTTACTTATGATGATCTTCCTCTTATCTAGCCATTGTTGAACTTTTGTCACGTTCTTAACAATTCTCCCCTCAAACAAAGTACCATTTAGTCTCCCGTCAAATAGAAATAGCCATCTTTTCATCCAACTCTTAACCAGTCCAACTCCTCTTCACCATAGCATACTGCTTATCTGATAGAACTCAATCACATATCACACCATAATTATATCTTTGAAGGCTTGCACTTCTTTGTTCGGCACTCGAGGATTCTACCAACATAGCATGGTTTTGAACCACTTGTTAGGGACAACAAAACTCTTATATATCTTCACAATAGTATGTATTGTTGACTTTGGGTATAAGCCCTCATGACTCTACTTTTGGTTTCATTAAAAGTCCGCATACCAACGAAGATATCGCCTCTCACTTTTATCCCCATGATTTTTCTCTTTTCTAGCTAATGTGGAACTTTGATCTCATTCTCAGCAATTTGTCTTCAGAATTTAAGAATAAGAAGGTATGTTCAATGCCATATGCGCTTACTATGTTTTTGTGCCTTTGCAGGATGATGACCAGGAATCTGTGTTTATGCCCAAAAAAAATGGAAAGAATTACTTATGTTACTTGCCTAAGGTGGAGAAGTCCAAGAGTGAAAAGCCAGCTATTCAACCGAACATGACTAGCATGATTATGGAATCTGAGAAGCGGGTTAAATTGAAGACTCCAGATGAGCTACTTGAGGCATTAAAAGAGCAATGCTTTGTCAGGGTTAGGATTTATCGTTGAATATTGTTTTGCATGCATATGATGACTATCTTATCTATATTTTAATATCACATCTCAAAAGAAAAACAAAGTTGTATCTTGTAAACAGTGTTTTTTAATGTGTGCCTTCAGAAATCAGGCATCCCAACAAAAAGTTAAAGAACTTAGATATTTTCTTCCTTGGTTATTTTCTTTAATTTTATAAATAATATATATTAAAAATATATGATATGCTTAAGTAGCGCAAGTGAAGTTTGTGCTTTTAGGTTGCCTTGCTTCACGTGAGACAAGGTGTCTTTGGTTGCGCTCAACACTGAAGCTATTTAAGACTTTGGTCGTTTGTGGCAAATTATGTGCATTTTTAGGTAAACCATGTGATGATTATGTTATAACATGTTGGCCTTGCATCGTTAATTTCTTTTTGCAGCAAGAGGGTTGGTGGACATATGAATTTTGTTACCAGAAAACGCTACGACAATTTCATTTGGAGGATGATAAGGTAGTCTCTTCTAGCACATCCTAATGCATTCTTTATGTGATTCTCGAATCCTTGTGCTTAAAATGGGGGATTGATGTTAATACTCGTAAAGAACCTTGTTTTTTAGCTTATGAATAAGGAGGGCAACTGTCATGGTTTATTGGTTAATTATAAATGTAAATTCATGCTCTGCTATTTGTGATGATCTAATGGTAAACTGTTTAGTAGTAAAGACTTCGAAGGTTCTGTCGTTTTGTCTTACAGGTAGTTCAGGAGTTTGTATTGGGTGTCTATGATGCAGAGGAAACCGCTAATCTCAATGAGAATCTCTCTGATATATCTACTTTGAAGGATCCTCGCTCCAAAGATGCATCTCAAAGGTGTGCTTATATTATAATTAGTTAAGTTAAGAATTATGAACAGAATTTAAGTAATGGGCAAAGACGATCTTTGATTAGTAAAGCTTGTAATTTTCCTAGTTCTAACACTTCTCAAAAGTAGTAAGATGGAGGCATACATGGAAGAAGAAACTTGTATGAGTTTTAATCCGCCATTCTATTGTTGATTTGGCTTTGAGTTTCTTTCATAATCATTTCTTACATGTGCCAAATGTGACATTCAGACATGAAACAAAAAACTCGTATGAATTTTGTGTTTGGATGCCACAGTCGCAATATTATAGCAGGAAAGCTAGGAAGGAAGTGTGTTAATCTGCTCATTATTTAAAATTGAGAACAGTGCAAGAGAAAGATTGGTGATTCGTTGAGTCATGTCATGTACAAGATTTGTGTGATAGACATGAGATCTATTAGTTGATAACTAAACAACTAATCTCAATTTCTAAAATGATTACTGATCTACCCGACTCACTCAGGTATCATGCTCATCATTACACAAATGGAACCATGTGTGATCTCACAAATCGACCACGAGAAACCGAGGTACAAAGTAATTAATGATTTACCTTGTCACTTTTTTTTTCTTCTTTTTTTCCCATCAACGAACATTGGTTTTTAATTGCGTTGCAGGTTAGATTTGTTTGCTCGGAGCCAAGAGCGATGATCGACTCTATCACAGAACTATCAACATGCAAGTATGCACTTACAGTGCGATGCCCGACGCTTTGCAAGCATCTGTAAATCTCTCCTTCTCTCCTTTCTCTTTTACCTATACACACACATCCATTTTGCTCATTTTTAGCTGAAATATAGCGACAAAATCAAGTGTTACTGCCACAACCTGCTATCAGTTTAACCGATTGTGTAGCTACATTGTGTACGAGGCAATCAATAGGAGATAGGAAACTAGCATAGGAACTCAAAAAGAAAGGAAGTTATCCCAATTTAAAAGAGTTAACATCAAAATGTCAATGTGATTGATAGGTATAGTTTCTATTCTATCCCTTGTCCGATCATTTTGTTTTGACTGGGCAGGTTATTCCAGGAAGAGAGACCAGTGTGGTACACCATTAACTGCAACGTGCTCCCTGATGATTACAAGGAAACAGAGCCAAGTGAAGACTTAGAAGACGAGATCGTCATGGTTACAGACGTCAAATACCCAAAAAATGAATCCGAAGAGTAATGTGAATATTTATATTGTAGAAGTTTTAACAACCAAACTAACCTTACAAAAGAAGCCATTCCTCTGTAGATTTGGATTCTGTTCTCGAATTCAACTATACAGTTGCTATGGAGATCAATCCACCGATTTTCAGGCCCCACGACGAACAACTCCCATGTGGAATTTCATATGCTTTGATCATATCTGAATATAGGTCAACCTGAAAGCTACTGATATGGCAGTCGTTTATGGGATTTATTGTATTGGACAATGATTCAACTTATTGGAGGGGAAAAGCAGCGAGTTTGAATTGGTAAACTCATAGCTTGCTTTTATTGAGACATTTACAACACTTCCACAATAACCACGATTGAGAGACGATATTATTTGAGTCAATAACATCATATGGATCTCAGAAAGATCCAAATTTCTTTTGTTATTATTTTATTTTAGGTACAGTTCTCAAATGGGTATGCAACCATTCTTCCCACTAGTACCCACTTGATGTCTATGCTTCATTTGTGCTCTGTTCAGTCCACAATCTCCACTACAGCTTTTCCCAAAGCATGTGCCTTCCCTTCTTGTAAAGCAAAACTTAATGGTTCCCAACCTTCTGGCAATACCCAAGTGGTCTTTCATGCTTCAATGGCGAAATCATAGGCTGAGGCTATGATTCAACCACCATCTCCCTAACATCAATTATTTTCTGGGTCTATTATATGTATTAGGATTTCATTAATTCAATCAGCTATTAGTTATTTGTTAGGTTTGCTTTTATAATATGTTTTAGATGCAAAGGCAAGCAGCTTTCTTTCACCCCTCCTTGTTTTTTCTTTTGCAGTGCATTCATTTATCCCTACTACACTAGCTCTTGGTACAAGCTCTACAAGATTTATGGTTGAAAATATGGATGCAACGGTACAACTTTTAAGGTATAAATTTACTCTCTTGAATAATTTCGGATCAGATGATATTTCTAGATCTTTATCTTTTTAACATGCACTCATTTCCTCTAGGTTAGTGATTCAAATCCTCGAGCCTTGTCGTACTAAGAAAAATCTATATCTTCTCTATTAAGACAGTTTTCTTTATAGATCAACCTTTTGTACTTTTCCATCACCCGACCAAGTCAACAAATACCTATATTTCTACGATTCTATAGACTTTCCCACTGTTAAACAATCCAAGAGTCAAGTGCAAGGGACAAAGTTAAGAGACTCAAATTTTGACTTCGATGAGACTCAAATTTTGACTTCGATGAAGAAAGCTTTTGTAGCGTTATATTAATCTAAATGTTTTCTAAACTTTTGTGGGAGTAGGTTTTATATCTTTATTACAAGGCTCTATGTAAGTGGTTGTTTTGTCTTTATATATTTTGAAAGTGTATTTAATAATTTAAAAGTGGGCATTGTAAAGCCACAAAAACCTCCCAACATTTGCAGCATCTATGCCCTTAAGATCAGCAATGTGGTAGTAGGTTACTGAATTTAAT TGAAGCTTCCGTGGCAGTGGATCAGTGTCAATACGACGCCGTAAAGTGAGTTTACGAAGACACCACTTTCTTCTTCCTCTCGTCGTGGCCGTCGTCGTCCTTTCGCTCCCAGCTGGTAATTCCTCACCCTTCCAGTTTGCTTCCCTCGTTTTCACCATTGTGAGTTCGTTTGAGGACACAGAGATGAGGGAATTTATGTGGCTGGTTCTTATAGCTGGTAGTTTTTGCTACTCTGCGTTTGCTGACCAGATCTTCCCAGCTCAATTAGGTGGTACATTTAGTCGCAACTCTCGTGGGCCAAAATACAATATTGAATTCCATCCAGAAGACTCGCCTTACAATCCGGATGATGACCAGGAATCTGTGTTTATGCCCAAAAAAAATGGAAAGAATTACTTATGTTACTTGCCTAAGGTGGAGAAGTCCAAGAGTGAAAAGCCAGCTATTCAACCGAACATGACTAGCATGATTATGGAATCTGAGAAGCGGGTTAAATTGAAGACTCCAGATGAGCTACTTGAGGCATTAAAAGAGCAATGCTTTGTCAGGCAAGAGGGTTGGTGGACATATGAATTTTGTTACCAGAAAACGCTACGACAATTTCATTTGGAGGATGATAAGGTAGTTCAGGAGTTTGTATTGGGTGTCTATGATGCAGAGGAAACCGCTAATCTCAATGAGAATCTCTCTGATATATCTACTTTGAAGGATCCTCGCTCCAAAGATGCATCTCAAAGGTATCATGCTCATCATTACACAAATGGAACCATGTGTGATCTCACAAATCGACCACGAGAAACCGAGGTTAGATTTGTTTGCTCGGAGCCAAGAGCGATGATCGACTCTATCACAGAACTATCAACATGCAAGTATGCACTTACAGTGCGATGCCCGACGCTTTGCAAGCATCTGTTATTCCAGGAAGAGAGACCAGTGTGGTACACCATTAACTGCAACGTGCTCCCTGATGATTACAAGGAAACAGAGCCAAGTGAAGACTTAGAAGACGAGATCGTCATGGTTACAGACGTCAAATACCCAAAAAATGAATCCGAAGAGTAATGTGAATATTTATATTGTAGAAGTTTTAACAACCAAACTAACCTTACAAAAGAAGCCATTCCTCTGTAGATTTGGATTCTGTTCTCGAATTCAACTATACAGTTGCTATGGAGATCAATCCACCGATTTTCAGGCCCCACGACGAACAACTCCCATGTGGAATTTCATATGCTTTGATCATATCTGAATATAGGTCAACCTGAAAGCTACTGATATGGCAGTCGTTTATGGGATTTATTGTATTGGACAATGATTCAACTTATTGGAGGGGAAAAGCAGCGAGTTTGAATTGTGCATTCATTTATCCCTACTACACTAGCTCTTGGTACAAGCTCTACAAGATTTATGGTTGAAAATATGGATGCAACGGTACAACTTTTAAGGTTAGTGATTCAAATCCTCGAGCCTTGTCGTACTAAGAAAAATCTATATCTTCTCTATTAAGACAGTTTTCTTTATAGATCAACCTTTTGTACTTTTCCATCACCCGACCAAGTCAACAAATACCTATATTTCTACGATTCTATAGACTTTCCCACTGTTAAACAATCCAAGAGTCAAGTGCAAGGGACAAAGTTAAGAGACTCAAATTTTGACTTCGATGAGACTCAAATTTTGACTTCGATGAAGAAAGCTTTTGTAGCGTTATATTAATCTAAATGTTTTCTAAACTTTTGTGGGAGTAGGTTTTATATCTTTATTACAAGGCTCTATGTAAGTGGTTGTTTTGTCTTTATATATTTTGAAAGTGTATTTAATAATTTAAAAGTGGGCATTGTAAAGCCACAAAAACCTCCCAACATTTGCAGCATCTATGCCCTTAAGATCAGCAATGTGGTAGTAGGTTACTGAATTTAAT ATGAGGGAATTTATGTGGCTGGTTCTTATAGCTGGTAGTTTTTGCTACTCTGCGTTTGCTGACCAGATCTTCCCAGCTCAATTAGGTGGTACATTTAGTCGCAACTCTCGTGGGCCAAAATACAATATTGAATTCCATCCAGAAGACTCGCCTTACAATCCGGATGATGACCAGGAATCTGTGTTTATGCCCAAAAAAAATGGAAAGAATTACTTATGTTACTTGCCTAAGGTGGAGAAGTCCAAGAGTGAAAAGCCAGCTATTCAACCGAACATGACTAGCATGATTATGGAATCTGAGAAGCGGGTTAAATTGAAGACTCCAGATGAGCTACTTGAGGCATTAAAAGAGCAATGCTTTGTCAGGCAAGAGGGTTGGTGGACATATGAATTTTGTTACCAGAAAACGCTACGACAATTTCATTTGGAGGATGATAAGGTAGTTCAGGAGTTTGTATTGGGTGTCTATGATGCAGAGGAAACCGCTAATCTCAATGAGAATCTCTCTGATATATCTACTTTGAAGGATCCTCGCTCCAAAGATGCATCTCAAAGGTATCATGCTCATCATTACACAAATGGAACCATGTGTGATCTCACAAATCGACCACGAGAAACCGAGGTTAGATTTGTTTGCTCGGAGCCAAGAGCGATGATCGACTCTATCACAGAACTATCAACATGCAAGTATGCACTTACAGTGCGATGCCCGACGCTTTGCAAGCATCTGTTATTCCAGGAAGAGAGACCAGTGTGGTACACCATTAACTGCAACGTGCTCCCTGATGATTACAAGGAAACAGAGCCAAGTGAAGACTTAGAAGACGAGATCGTCATGGTTACAGACGTCAAATACCCAAAAAATGAATCCGAAGAGTAA MREFMWLVLIAGSFCYSAFADQIFPAQLGGTFSRNSRGPKYNIEFHPEDSPYNPDDDQESVFMPKKNGKNYLCYLPKVEKSKSEKPAIQPNMTSMIMESEKRVKLKTPDELLEALKEQCFVRQEGWWTYEFCYQKTLRQFHLEDDKVVQEFVLGVYDAEETANLNENLSDISTLKDPRSKDASQRYHAHHYTNGTMCDLTNRPRETEVRFVCSEPRAMIDSITELSTCKYALTVRCPTLCKHLLFQEERPVWYTINCNVLPDDYKETEPSEDLEDEIVMVTDVKYPKNESEE
BLAST of Cp4.1LG18g05240 vs. Swiss-Prot
Match: OS9_ARATH (Protein OS-9 homolog OS=Arabidopsis thaliana GN=OS9 PE=1 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 9.6e-86 Identity = 160/279 (57.35%), Postives = 207/279 (74.19%), Query Frame = 1
BLAST of Cp4.1LG18g05240 vs. Swiss-Prot
Match: OS9_ORYSJ (Protein OS-9 homolog OS=Oryza sativa subsp. japonica GN=OS9 PE=2 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 1.7e-74 Identity = 145/279 (51.97%), Postives = 194/279 (69.53%), Query Frame = 1
BLAST of Cp4.1LG18g05240 vs. Swiss-Prot
Match: OS9_HUMAN (Protein OS-9 OS=Homo sapiens GN=OS9 PE=1 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 4.9e-21 Identity = 80/245 (32.65%), Postives = 113/245 (46.12%), Query Frame = 1
BLAST of Cp4.1LG18g05240 vs. Swiss-Prot
Match: OS9_BOVIN (Protein OS-9 OS=Bos taurus GN=OS9 PE=2 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 4.9e-21 Identity = 81/245 (33.06%), Postives = 113/245 (46.12%), Query Frame = 1
BLAST of Cp4.1LG18g05240 vs. Swiss-Prot
Match: OS9_MOUSE (Protein OS-9 OS=Mus musculus GN=Os9 PE=1 SV=2) HSP 1 Score: 96.7 bits (239), Expect = 4.6e-19 Identity = 86/290 (29.66%), Postives = 131/290 (45.17%), Query Frame = 1
BLAST of Cp4.1LG18g05240 vs. TrEMBL
Match: A0A0A0LWI4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G264000 PE=4 SV=1) HSP 1 Score: 523.1 bits (1346), Expect = 2.2e-145 Identity = 254/294 (86.39%), Postives = 273/294 (92.86%), Query Frame = 1
BLAST of Cp4.1LG18g05240 vs. TrEMBL
Match: V4UQ02_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009016mg PE=4 SV=1) HSP 1 Score: 434.9 bits (1117), Expect = 7.9e-119 Identity = 210/295 (71.19%), Postives = 248/295 (84.07%), Query Frame = 1
BLAST of Cp4.1LG18g05240 vs. TrEMBL
Match: A0A061GN28_THECC (OS-9 OS=Theobroma cacao GN=TCM_038204 PE=4 SV=1) HSP 1 Score: 427.6 bits (1098), Expect = 1.3e-116 Identity = 209/283 (73.85%), Postives = 238/283 (84.10%), Query Frame = 1
BLAST of Cp4.1LG18g05240 vs. TrEMBL
Match: B9N6Z5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s06030g PE=4 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 2.4e-115 Identity = 204/293 (69.62%), Postives = 240/293 (81.91%), Query Frame = 1
BLAST of Cp4.1LG18g05240 vs. TrEMBL
Match: A0A068UQ93_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00031237001 PE=4 SV=1) HSP 1 Score: 419.9 bits (1078), Expect = 2.6e-114 Identity = 204/292 (69.86%), Postives = 244/292 (83.56%), Query Frame = 1
BLAST of Cp4.1LG18g05240 vs. TAIR10
Match: AT5G35080.1 (AT5G35080.1 INVOLVED IN: biological_process unknown) HSP 1 Score: 318.2 bits (814), Expect = 5.4e-87 Identity = 160/279 (57.35%), Postives = 207/279 (74.19%), Query Frame = 1
BLAST of Cp4.1LG18g05240 vs. NCBI nr
Match: gi|659086418|ref|XP_008443924.1| (PREDICTED: protein OS-9 isoform X2 [Cucumis melo]) HSP 1 Score: 532.7 bits (1371), Expect = 4.0e-148 Identity = 256/293 (87.37%), Postives = 275/293 (93.86%), Query Frame = 1
BLAST of Cp4.1LG18g05240 vs. NCBI nr
Match: gi|659086416|ref|XP_008443923.1| (PREDICTED: protein OS-9 isoform X1 [Cucumis melo]) HSP 1 Score: 528.1 bits (1359), Expect = 9.8e-147 Identity = 256/294 (87.07%), Postives = 275/294 (93.54%), Query Frame = 1
BLAST of Cp4.1LG18g05240 vs. NCBI nr
Match: gi|449457953|ref|XP_004146712.1| (PREDICTED: protein OS-9 homolog isoform X2 [Cucumis sativus]) HSP 1 Score: 527.7 bits (1358), Expect = 1.3e-146 Identity = 254/293 (86.69%), Postives = 273/293 (93.17%), Query Frame = 1
BLAST of Cp4.1LG18g05240 vs. NCBI nr
Match: gi|778660161|ref|XP_011655712.1| (PREDICTED: protein OS-9 homolog isoform X1 [Cucumis sativus]) HSP 1 Score: 523.1 bits (1346), Expect = 3.2e-145 Identity = 254/294 (86.39%), Postives = 273/294 (92.86%), Query Frame = 1
BLAST of Cp4.1LG18g05240 vs. NCBI nr
Match: gi|1000940996|ref|XP_015582774.1| (PREDICTED: protein OS-9 homolog [Ricinus communis]) HSP 1 Score: 439.5 bits (1129), Expect = 4.6e-120 Identity = 208/285 (72.98%), Postives = 242/285 (84.91%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |