Cp4.1LG18g02880 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG18g02880
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Transmembrane proteins 14C
Location	Cp4.1LG18 : 4379761 .. 4384276 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATGTATGTATGTATGTATGTATGTATGTATGTATGTGTATATATATATATATATATATATATATATTTGACTTCCACAGTCTTCGCTCGAAAATCAAAACCCACTTGGAGGTTTACGGGATTCTTTCGGAAGAAGGAAAATGGCGGAGGTTTTAGCCGGAGTGTCTCAGGCGTCATTAGTTTTCCGGCCGCGAGTCGGTGGAGCTCTGAGGAGCAATAATTTTTCAATTAGACGCCTGCAATTTCAATCTACAATCGGTAGAGGTAAGCAATCGTGTTTTTACGGCATCATTTGATACTCTTTGTAGATTTGCGCTGTTTATCCGTTTCGGATCGTCATCTAGATTTAATGTTAGTTAATTACTTAATTAATGCGATGATTGAAACACATTCTGAATTTCATGTTTTCCGTAGGGATTTCCTTTGATTGTAAGAAAGTAGTATCTGCTATCCGTGCGACCGACTCTGAAAATGACATCGAGATTTATCCAGACGCCACTGGCGGTGATTCTTCTGATAAAGGGATTCACGGCGATGGAGGAGGTGGTAGCGGCGGAGGTAAAGGTGGTAGAGGCGATAATGATGGCAATAGCGGGGAGGGAGAGGAATCTAATGACAGCAGCCGGAAGAAAGCTTTGTCAATGTCGCAGAAATTAACTCTTGGATATGCAGCACTAGTAGGAGGTTCTATTTTCCATTACTTATTTCCTTTTTTTTTTTTTTTTTTTTTGTTGTTGTAAATTTGAAGCGAAGGTGTCAATTATGTTCATACGGAATGTATTATAATTGTTCTTGGTTGCAATATTAATTCAGTCCTTCTCCTTTTCACTTCGCAGTTGGCGGCTTAATGGGATATTTGAAAAGTGGCAGCCAAAAGTCGCTCATGGCAGGGGGAGTCTCAGCCTCACTGTTACTTGTCGTTTATAAACTGCTCCCCAGCAACCCTGTTCTTGCATCGTCTCTGGGTCTTGGTAAGGATTGGTTATATCTCTTAACTAGCTCCCGTTTGATTACTTGTTTAGCTTTTGAAAATTAAGTTTATAAATACTGTTTTCACTTATGAGTCCTATTGTTTTGTTAGCAATGTTTTCAAGATCCATGACAAGTTTTAGAAACTAAAAAATAAGTACCTTTTAGAAATTTGTGTTTATTTTTTAAACCTGGCTAGAAACTCAATTGTTAGATGAAGACCAATGCAAAGAGGTTGCAAGAAAACAAGCACAAGTTTCAAAAACAAAAAAAACTAACAATCAAATGATTATTAAATGGACCTCGATTGTCATACGTTTTTCCTTATCACATAGCTGATATAAACTGTCCTATTGGGAACTTCCAGTTCTTGAATCCTTATTAGAAACAATGAGCAGATACACTTCGTTTTGGGATGTATATGCAATTTCTAGCTATGAATAACAAGTTCTCCCCTCTTCTTTACATTAAATTTGGTTTAATGGAAAGGAACGAACTCGAGTGTGTCCATAATTAAGTTTTCTACGCCAAAGTAGATTGGTTGCTAGTCTTTCATAGGAAACGACGAAATTAGTTATGGAAACACTATTAAGCGTCCCGGTTAATTCGTTCAAAGATTAGTTATATGGATTTGCCAGAGTTTTCAGAGTGTTTGTTGTGGAGTTTGTTAGTGGCAGTGGCAGTTGAATACAAAGGAAAGCGTGGTAAGTGAAACATGAGGAGAATATTGAGAGTTCTATGTTAATCTTCCCTTAGGTCGTGGTCCAGTTTCCTTGAGTCGCCTCTGATCTTATTGACAATTTGTATCTTCTTATTTTGGTCATTCTATATAAGGCCTGGTTTCTTGAAAACTAGTAGCGGAGCATTCATTCTTTAAAATGGAGTCAGAATTTAGAAAAGAATTCTTGAGCGGAAATGATAGTGTTTTGGCATCAATTTGTTGCCAAGTGGGATTGGGATGCAATCAAAGCTGGATATGAGTCTACATTACAGATACGTGGTCCAAATTATTTCTAGATTATGAGATTTTGAGTATAACCTTCGATGTTGGTCGTGTTCTCAGTTCATCTCAGTTCACCTTTCTTATCTGTAGTTTTATAGCAAAAGTTGTGCTGTCGGGATTCTTTGTTGGGGAAACTCAATTGCTTAGCTCTCACATTGGGAATACCAAAAAGAAAGAAAACACAAGTATCAGAAAGATAGAAGGAAATGTATTGCAATATCAAGAGAAATCACAATATCAATAGCCTTTTGAGAGGACTATATCTCTCCATCGCGTCCCATAGTCGGACAATTCACCACAATGATCCTTTTTTTCCCTTAGATCCTGAACTCTCCCTATTTAGAATCAAGTTACCCTGCAATAATGTTCTGTTGGTCAAATGGTTGTGGTGGTTTCATCTAGAATCCAATTCCTTGTGGCAAAAGGTTATAGTGAGTAAATATGGGTCTCCTTTTGAGTGGAGCTCAAGTCAAAGGCACATCCAGAAATCCTTGAAAAAGTATTGTTGAGGATCTTCCGTTCTGTTCTCTTGCTGTTTGTAACTTAGTTGGAGATGGCAGAAACGTTTTTTTTGGGAGGATAGATGGTTGGAGGATAAACATTGCTGCTATTTATTCTCTCGGTTATTTCATTTGTCCTTGATGAGAAATAGTTTGGTGGCAGCTGTTTTGGCTCAGTCCACATCCTCTCCTTCGTTGGGGTCTAGTTGAGCTTTGTTCAATAGCGAAACACAAGATATTATTGATTGTCTATTGATATTTGGTGTAACAGCTCAAGCCCACCGCTAGCAGATATATGCTTCGTTCTCCTCTCCAATCGATGTGGGATCTCACAATCCACCCCCCTTCGAGGCCCAACATCCTCGTTGGCACTCGTTCCCCTCTCCAATCAATGTGGGACCCCCCAATCCACCCCCTTCGGGCCTAGTGTCCTCGCTGACACATCGCCCTGTGTTTGGCTTTGATACCATTTGTAATAGCTAAAGCCCACCACTAGCAAATATTGTCCTCTTTGGGCTTTTCCTTCCGGGCTCCCCCTCAAAGTTTTAAACGGGTCTGCTTGGGAGAAGTTTCCACACTCTTATAAATAATGTTTCGTTCCCCTCTCCACTCTATTGATACTGTACGTTGTGTTGAGATGACCTTCCATACTGAGGACAAAAATCAGCCTTGATAAAGAATGGGGATGGACCACGTTCATCATCTCGAGGACAAGGCGATACTTTATTTATGAGTAGTGTAGGCATCTAGGATAGTTGGTTCATTAGCTATATGGGTATCTGGAGTTTCCTTCCGTGTTAGTTGTGGGACTCGATAGTGCTTAGCGGTTTTAAACTAGGGAATAGGATAGCGAATGAAATGTAAGGTGAAGATTGAGAATCTTGTAATGAGCTTGGCTCATGGAAGGCTTTCAGATTCTTAAGTTACCTGCAGCTATCCCGTTTGCTTGCTTTTCGGCTTTTAGCCATTTTATACGAGTTTGGACTGTTTCGATTCAGTCGAAACTTTGCAAAATAGTGCTTAGTTTCATTTCAATATTTCCTCTTCCACACGAGTAGCTTAGAATGATTATACATAAGGTCATTGTTTTAACTTAATCTCCTCGTTTCATCAAACCCGTCTCAACTTGCTTTTATTCTTAATCTACAGGCCTGTCTGCTTCGCTACTGGTAGTAATGGGATCTCGTTTCAAGAATTCGGGGAAGATATTTCCAGCCGGTATCGTATCTCTCGTGTCGTTTGTAATGACTGGAGGTTACATGCATGGAATTTTACGTAGCGCGCATTGAATGTATGGCGTTTGATGAAAAACTGGTGAGGATAGTCATAAACTGTAATCGGCAGATGTGGTTGTTGCTGTAGAATCCTTTTTTCTGTGGATTGGAGTCTTAGATCTGTGGAATTGATTTTGATGTGCCTTCAACTTTGTTCTTCAAGTACCTTTATGCAACCATATGAACAATGGTAATAATACTAGACTTTCAATGTTCAAAGGTTAATGAACAGGCTTGTTCTTGTTCTTGTTCTTTCCAGATTTGGAAGCTGCTTTTGAATGGAATGGTGTAAAAATTTGTCTGTTCAACCGTTTTAGCACAAATTTTATTTTTCAATGGAAGATTTCACAATCTTTTAAGCTTATAAACACTATTTCGACTTTTTTTTTGTTTTTTTTTTATGGTTGAGTGCTCTCCCCTCGTCAGAAACTAATCGAACTTAGATTATGTGTGGGATGCAATCCTTAATAGTCCATGGTTGGTGAAAGTCCGTCAATGTCGCAGGGACTCATTCTGACTGAAACAAGAGATGGATCTTAACCAACTTTCAGATATTCGTGATTTGAGAGAAGCCAAAAGATGGGAGCGGAAGGAGCGAGCCTTATTAAAGAAAAAAAAAGCCCCTCTCGAACAAAGTAAGGGATTGAGTAGCGTGAAAGCCACGACTTCTGTTCGATGTACCATTTGAACTCTCCTTTGTTGCATGATTTCTTCCTTCCACCTCTCTTCTACAAATGGGTGGAGACTAAGGGATATGGACGTTAGAGC

mRNA sequence

TATATGTATGTATGTATGTATGTATGTATGTATGTATGTGTATATATATATATATATATATATATATATTTGACTTCCACAGTCTTCGCTCGAAAATCAAAACCCACTTGGAGGTTTACGGGATTCTTTCGGAAGAAGGAAAATGGCGGAGGTTTTAGCCGGAGTGTCTCAGGCGTCATTAGTTTTCCGGCCGCGAGTCGGTGGAGCTCTGAGGAGCAATAATTTTTCAATTAGACGCCTGCAATTTCAATCTACAATCGGTAGAGGGATTTCCTTTGATTGTAAGAAAGTAGTATCTGCTATCCGTGCGACCGACTCTGAAAATGACATCGAGATTTATCCAGACGCCACTGGCGGTGATTCTTCTGATAAAGGGATTCACGGCGATGGAGGAGGTGGTAGCGGCGGAGGTAAAGGTGGTAGAGGCGATAATGATGGCAATAGCGGGGAGGGAGAGGAATCTAATGACAGCAGCCGGAAGAAAGCTTTGTCAATGTCGCAGAAATTAACTCTTGGATATGCAGCACTAGTAGGAGAGTTTTCAGAGTGTTTGTTGTGGAGTTTGTTAGTGGCAGTGGCAGTTGAATACAAAGGAAAGCGTGGCCTGTCTGCTTCGCTACTGGTAGTAATGGGATCTCGTTTCAAGAATTCGGGGAAGATATTTCCAGCCGGTATCGTATCTCTCGTGTCGTTTGTAATGACTGGAGGTTACATGCATGGAATTTTACGTAGCGCGCATTGAATGTATGGCGTTTGATGAAAAACTGGTGAGGATAGTCATAAACTGTAATCGGCAGATGTGGTTGTTGCTGTAGAATCCTTTTTTCTGTGGATTGGAGTCTTAGATCTGTGGAATTGATTTTGATGTGCCTTCAACTTTGTTCTTCAAGTACCTTTATGCAACCATATGAACAATGGGACTCATTCTGACTGAAACAAGAGATGGATCTTAACCAACTTTCAGATATTCGTGATTTGAGAGAAGCCAAAAGATGGGAGCGGAAGGAGCGAGCCTTATTAAAGAAAAAAAAAGCCCCTCTCGAACAAAGTAAGGGATTGAGTAGCGTGAAAGCCACGACTTCTGTTCGATGTACCATTTGAACTCTCCTTTGTTGCATGATTTCTTCCTTCCACCTCTCTTCTACAAATGGGTGGAGACTAAGGGATATGGACGTTAGAGC

Coding sequence (CDS)

ATGGCGGAGGTTTTAGCCGGAGTGTCTCAGGCGTCATTAGTTTTCCGGCCGCGAGTCGGTGGAGCTCTGAGGAGCAATAATTTTTCAATTAGACGCCTGCAATTTCAATCTACAATCGGTAGAGGGATTTCCTTTGATTGTAAGAAAGTAGTATCTGCTATCCGTGCGACCGACTCTGAAAATGACATCGAGATTTATCCAGACGCCACTGGCGGTGATTCTTCTGATAAAGGGATTCACGGCGATGGAGGAGGTGGTAGCGGCGGAGGTAAAGGTGGTAGAGGCGATAATGATGGCAATAGCGGGGAGGGAGAGGAATCTAATGACAGCAGCCGGAAGAAAGCTTTGTCAATGTCGCAGAAATTAACTCTTGGATATGCAGCACTAGTAGGAGAGTTTTCAGAGTGTTTGTTGTGGAGTTTGTTAGTGGCAGTGGCAGTTGAATACAAAGGAAAGCGTGGCCTGTCTGCTTCGCTACTGGTAGTAATGGGATCTCGTTTCAAGAATTCGGGGAAGATATTTCCAGCCGGTATCGTATCTCTCGTGTCGTTTGTAATGACTGGAGGTTACATGCATGGAATTTTACGTAGCGCGCATTGA

Protein sequence

MAEVLAGVSQASLVFRPRVGGALRSNNFSIRRLQFQSTIGRGISFDCKKVVSAIRATDSENDIEIYPDATGGDSSDKGIHGDGGGGSGGGKGGRGDNDGNSGEGEESNDSSRKKALSMSQKLTLGYAALVGEFSECLLWSLLVAVAVEYKGKRGLSASLLVVMGSRFKNSGKIFPAGIVSLVSFVMTGGYMHGILRSAH

Homology

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BLAST of Cp4.1LG18g02880 vs. Swiss-Prot
Match: FAX2_ARATH (Protein FATTY ACID EXPORT 2, chloroplastic OS=Arabidopsis thaliana GN=FAX2 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.1e-13
Identity = 76/185 (41.08%), Postives = 100/185 (54.05%), Query Frame = 1


Query: 38  TIGRGISFDCKKVVSAIRATDSENDIEIYPDATGGDSSDKGIHGDGGGGSGGGKGGRGDN 97
           TI   I+ +C  V S ++A + E  I    D  GG     GI GD  GG GGG  G G++
Sbjct: 69  TITSTITANC--VDSGVKAVEVEPTI----DYGGGG----GIGGDKFGGGGGG--GDGND 128

Query: 98  DGNSGEGEESNDSSRKKALSMSQKLTLGYAALVGE----------FSECLLWSLLVAVAV 157
           DG   + EES D  +   LSMSQKLTLGYA LVG             + LL   L A  +
Sbjct: 129 DGGEDDKEES-DGKKSTPLSMSQKLTLGYAFLVGVGGLMGYLKSGSQKSLLAGGLSAAVL 188

Query: 158 EYKGKR-------------GLSASLLVVMGSRFKNSGKIFPAGIVSLVSFVMTGGYMHGI 200
            Y   +              ++ +L+ VMG+R+  S KIFPAG+VS++SF+MTGGY+HGI
Sbjct: 189 LYVFSQLPTKPVLASTVGVVMAGALMYVMGTRYMRSKKIFPAGVVSIMSFIMTGGYIHGI 240

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BLAST of Cp4.1LG18g02880 vs. Swiss-Prot
Match: FAX7_ARATH (Protein FATTY ACID EXPORT 7 OS=Arabidopsis thaliana GN=FAX7 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.9e-07
Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 1


Query: 117 SMSQKLTLGYAALVG---------EFSECLLWS------LLVAVAVEYKGKRGLSASLLV 176
           S+SQK TL YA+L+G           S+  L +      L   V  E  G   L++S+ +
Sbjct: 4   SLSQKFTLAYASLLGVGGLMGYLKRGSKISLVAGGGSAALFYYVYTELPGNPVLASSIGI 63

Query: 177 V--------MGSRFKNSGKIFPAGIVSLVSFVMTGGYMHGILRSA 199
           V        MGSR+  + K+ PAG+VS+VS VMTG Y+HG++RS+
Sbjct: 64  VGSAALTGMMGSRYLRTRKVVPAGLVSVVSLVMTGAYLHGLIRSS 108

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BLAST of Cp4.1LG18g02880 vs. TrEMBL
Match: A0A0A0M2B1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G598860 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.5e-68
Identity = 164/223 (73.54%), Postives = 176/223 (78.92%), Query Frame = 1


Query: 1   MAEVLAGVSQASLVFRPRVGGALRSNNFSIRRLQFQSTIGRGISFDCKKVVSAIRATDSE 60
           MAEVLAGVSQASLVFRPR+GGALR+NNFS++RLQFQSTIGRGISFDCK VVSAIRATDS+
Sbjct: 1   MAEVLAGVSQASLVFRPRLGGALRTNNFSVKRLQFQSTIGRGISFDCKTVVSAIRATDSK 60

Query: 61  N-DIEIYPDATGGDSSDKGIHGDGGGGSGGGKGGRGDNDGNSGEGEESNDSSRKKALSMS 120
           N DI+IYPD TGGDSSDKGI   GGGGSGGG GGRGDN GNSGEGEESN  SRKKALSMS
Sbjct: 61  NEDIDIYPDTTGGDSSDKGI---GGGGSGGGNGGRGDNGGNSGEGEESNADSRKKALSMS 120

Query: 121 QKLTLGYAALVGE---------------FSECLLWSLLVAV--------AVEYKGKRGLS 180
           QKLTLGYAALVG                 +  +  SLL+ V         +      GLS
Sbjct: 121 QKLTLGYAALVGVGGLMGYLKGGSQKSLMAGGVSASLLLVVFKLLPNNPVLASSLGLGLS 180

Query: 181 ASLLVVMGSRFKNSGKIFPAGIVSLVSFVMTGGYMHGILRSAH 200
           ASLLVVMGSRFKNSGKIFPAGIVSLVSF+MTGGYMHGILRS+H
Sbjct: 181 ASLLVVMGSRFKNSGKIFPAGIVSLVSFIMTGGYMHGILRSSH 220

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BLAST of Cp4.1LG18g02880 vs. TrEMBL
Match: W9S3X9_9ROSA (UPF0136 membrane protein OS=Morus notabilis GN=L484_019582 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.5e-25
Identity = 111/252 (44.05%), Postives = 136/252 (53.97%), Query Frame = 1


Query: 1   MAEVLAGVSQASLVFRPRVGGALR-----------SNNFSIRRLQ-----FQSTIGRGIS 60
           MAEVL GVSQ+SL+  P++G +             SN     R Q     F S+  R + 
Sbjct: 1   MAEVLFGVSQSSLLLHPKIGFSCGRAISPGLPSPPSNPVGTARYQLFGTSFGSSRLRSVH 60

Query: 61  FD--CKKVVSAIRAT-----DSEN-DIEIYP------DATGGDSSDKGIHGDGGGGSGGG 120
            +  C  +VS  +A+     DSEN ++EI        D  GGD    G  GD GGG  GG
Sbjct: 61  RNPLCAAIVSDTKASNTFTVDSENKEVEIESGTGVESDTGGGDGDGFGDRGDSGGG--GG 120

Query: 121 KGGRGDNDGNSGEGEESNDSSRKKALSMSQKLTLGYAALVGE----------FSECLLWS 180
           +GG  + D   G+GE    S +K ALSMSQKLTLGYAALVG             + LL  
Sbjct: 121 RGGDSNRDKGDGDGESHEKSEKKMALSMSQKLTLGYAALVGVGGLMGYLKSGSQKSLLAG 180

Query: 181 LLVAVAVEYKGKR-------------GLSASLLVVMGSRFKNSGKIFPAGIVSLVSFVMT 200
            + A  + Y   +             GLSA+LL VMGSRFK+SGKIFPAG+VSLVS VMT
Sbjct: 181 GISASLLYYVHTQLPTNPVFASTLGLGLSAALLGVMGSRFKSSGKIFPAGVVSLVSLVMT 240

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BLAST of Cp4.1LG18g02880 vs. TrEMBL
Match: M5WA80_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010755mg PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.5e-23
Identity = 109/238 (45.80%), Postives = 125/238 (52.52%), Query Frame = 1


Query: 8   VSQASLVFRPRVGGALRSNNFSI---RRLQFQSTIGRGISFDCKKVV------------- 67
           VSQ+SLV RP++G AL + N SI   +RLQ  +   RG        +             
Sbjct: 6   VSQSSLVLRPKIG-ALHNLNTSISPAQRLQHNNLSYRGFGASSGNALLLRHASIQKLGVV 65

Query: 68  -----SAIRATDSE-NDIEIYPDATGGDSSDKGIHGDGGGGSGGGKGGRGDNDGNSGEGE 127
                S I   DS   DI I P ATGG     G  GD GG  GGG GG GDN  + GEGE
Sbjct: 66  SDTKSSTIFTVDSGIKDIGIEP-ATGGG----GGGGDFGGRGGGGGGGGGDNSDDKGEGE 125

Query: 128 ESNDSSR-KKALSMSQKLTLGYAALVGE----------FSECLLWSLLVAVAVEYKGKR- 187
           E  +  R KK +SMSQKLTLGYAALVG             + LL   L A  + Y     
Sbjct: 126 EGPEEKREKKGMSMSQKLTLGYAALVGVGGLMGFLKSGSQKSLLAGGLSAALLFYVSTEL 185

Query: 188 ------------GLSASLLVVMGSRFKNSGKIFPAGIVSLVSFVMTGGYMHGILRSAH 200
                       GLSA+LL VMGSRFK SGK+FPAG+VSLVS VMTGGY+HGILR  H
Sbjct: 186 PVRPVFASSIGLGLSAALLGVMGSRFKKSGKVFPAGVVSLVSLVMTGGYLHGILRGMH 237

[Close]

BLAST of Cp4.1LG18g02880 vs. TrEMBL
Match: A0A061GSK8_THECC (Transmembrane proteins 14C OS=Theobroma cacao GN=TCM_037428 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.5e-23
Identity = 101/234 (43.16%), Postives = 125/234 (53.42%), Query Frame = 1


Query: 1   MAEVLAGVSQASLV-FRPRVGGALRS---NNFSIRRLQFQS------TIGRGISFDCKKV 60
           MA++L GVSQ+SL+  +P++G   R    NN+   R           T+   +S D K  
Sbjct: 1   MADLLVGVSQSSLLRLQPKLGSFRRLQLFNNYGYPRFGNSQLDLKGVTVAGVVSSDSKAP 60

Query: 61  VSAIRATD-SENDIEIYPDATGGDSSDKGIHGDGGGGSGGGKGGRGDNDGNSGEGEESND 120
                + D ++  IEI  D   G   +      GGGG GGG    G + GN GEGE S+D
Sbjct: 61  TILTNSVDFAKGGIEIEVDTGNGGGDNFDNRSGGGGGGGGGDNSGGGDSGNKGEGEFSDD 120

Query: 121 SSRKK-ALSMSQKLTLGYAALVGE---------------FSECLLWSLLVAVAVEYKGKR 180
            S+K  ALSMSQKLTLGYAALVG                 +  L  SLL  V  +   K 
Sbjct: 121 GSKKTMALSMSQKLTLGYAALVGVGGVMGYIKSGSQKSLMAGGLSASLLYYVYTQLPAKP 180

Query: 181 --------GLSASLLVVMGSRFKNSGKIFPAGIVSLVSFVMTGGYMHGILRSAH 200
                   G SA+LL VMG RFK SGK+FPAG+VSLVS VMTGGY+HGI+RS H
Sbjct: 181 VFGSSLGLGTSAALLGVMGFRFKRSGKVFPAGVVSLVSLVMTGGYLHGIMRSLH 234

[Close]

BLAST of Cp4.1LG18g02880 vs. TrEMBL
Match: A0A0D2N4I2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G018900 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.0e-22
Identity = 102/234 (43.59%), Postives = 127/234 (54.27%), Query Frame = 1


Query: 1   MAEVLAGVSQASLV-FRP------RVGGALRSNNFSIRRLQFQS-TIGRGISFDCKKVVS 60
           MA++  GVSQ+SL+  +P      R+ G  R    S R+L F+  T+   +S D K   +
Sbjct: 1   MADLFIGVSQSSLLHLQPKLASFQRLTGGPRFAVASNRQLHFRRLTVTGVVSSDSKAPTT 60

Query: 61  AIRATDSEN---DIEIYPDATGGDSSDKGIHGDGGGGSGGGKGGRGDNDGNSGEGEESND 120
                 SE    DIE+     GGD  D      GGGG GG   G G +  + GEGE S+D
Sbjct: 61  VTSTVGSEKGGIDIEVDTGNGGGDKFDDR---SGGGGDGGDNSGGGGDSESKGEGEFSDD 120

Query: 121 SSRKK-ALSMSQKLTLGYAALVGE----------FSECLLWSLLVAVAVEYKGKR----- 180
             +KK ALSMSQKLTLGYAALVG             + L    L A  + Y   +     
Sbjct: 121 GGKKKMALSMSQKLTLGYAALVGVGGVMGYVKSGSQKSLAAGGLSAAVLYYVYTQLPTNP 180

Query: 181 --------GLSASLLVVMGSRFKNSGKIFPAGIVSLVSFVMTGGYMHGILRSAH 200
                   G+SA+LL VMGSRFK SGK+FPAG+VSLVS VMTGGY+HGI+RS H
Sbjct: 181 VFASSVGLGISAALLGVMGSRFKRSGKVFPAGVVSLVSLVMTGGYLHGIMRSMH 231

[Close]

BLAST of Cp4.1LG18g02880 vs. TAIR10
Match: AT3G43520.1 (AT3G43520.1 Transmembrane proteins 14C)

HSP 1 Score: 78.2 bits (191), Expect = 6.4e-15
Identity = 76/185 (41.08%), Postives = 100/185 (54.05%), Query Frame = 1


Query: 38  TIGRGISFDCKKVVSAIRATDSENDIEIYPDATGGDSSDKGIHGDGGGGSGGGKGGRGDN 97
           TI   I+ +C  V S ++A + E  I    D  GG     GI GD  GG GGG  G G++
Sbjct: 69  TITSTITANC--VDSGVKAVEVEPTI----DYGGGG----GIGGDKFGGGGGG--GDGND 128

Query: 98  DGNSGEGEESNDSSRKKALSMSQKLTLGYAALVGE----------FSECLLWSLLVAVAV 157
           DG   + EES D  +   LSMSQKLTLGYA LVG             + LL   L A  +
Sbjct: 129 DGGEDDKEES-DGKKSTPLSMSQKLTLGYAFLVGVGGLMGYLKSGSQKSLLAGGLSAAVL 188

Query: 158 EYKGKR-------------GLSASLLVVMGSRFKNSGKIFPAGIVSLVSFVMTGGYMHGI 200
            Y   +              ++ +L+ VMG+R+  S KIFPAG+VS++SF+MTGGY+HGI
Sbjct: 189 LYVFSQLPTKPVLASTVGVVMAGALMYVMGTRYMRSKKIFPAGVVSIMSFIMTGGYIHGI 240

[Close]

BLAST of Cp4.1LG18g02880 vs. TAIR10
Match: AT2G26240.1 (AT2G26240.1 Transmembrane proteins 14C)

HSP 1 Score: 55.5 bits (132), Expect = 4.5e-08
Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 1


Query: 117 SMSQKLTLGYAALVG---------EFSECLLWS------LLVAVAVEYKGKRGLSASLLV 176
           S+SQK TL YA+L+G           S+  L +      L   V  E  G   L++S+ +
Sbjct: 4   SLSQKFTLAYASLLGVGGLMGYLKRGSKISLVAGGGSAALFYYVYTELPGNPVLASSIGI 63

Query: 177 V--------MGSRFKNSGKIFPAGIVSLVSFVMTGGYMHGILRSA 199
           V        MGSR+  + K+ PAG+VS+VS VMTG Y+HG++RS+
Sbjct: 64  VGSAALTGMMGSRYLRTRKVVPAGLVSVVSLVMTGAYLHGLIRSS 108

[Close]

BLAST of Cp4.1LG18g02880 vs. NCBI nr
Match: gi|449452628|ref|XP_004144061.1| (PREDICTED: neurogenic protein mastermind [Cucumis sativus])

HSP 1 Score: 266.5 bits (680), Expect = 3.6e-68
Identity = 164/223 (73.54%), Postives = 176/223 (78.92%), Query Frame = 1


Query: 1   MAEVLAGVSQASLVFRPRVGGALRSNNFSIRRLQFQSTIGRGISFDCKKVVSAIRATDSE 60
           MAEVLAGVSQASLVFRPR+GGALR+NNFS++RLQFQSTIGRGISFDCK VVSAIRATDS+
Sbjct: 1   MAEVLAGVSQASLVFRPRLGGALRTNNFSVKRLQFQSTIGRGISFDCKTVVSAIRATDSK 60

Query: 61  N-DIEIYPDATGGDSSDKGIHGDGGGGSGGGKGGRGDNDGNSGEGEESNDSSRKKALSMS 120
           N DI+IYPD TGGDSSDKGI   GGGGSGGG GGRGDN GNSGEGEESN  SRKKALSMS
Sbjct: 61  NEDIDIYPDTTGGDSSDKGI---GGGGSGGGNGGRGDNGGNSGEGEESNADSRKKALSMS 120

Query: 121 QKLTLGYAALVGE---------------FSECLLWSLLVAV--------AVEYKGKRGLS 180
           QKLTLGYAALVG                 +  +  SLL+ V         +      GLS
Sbjct: 121 QKLTLGYAALVGVGGLMGYLKGGSQKSLMAGGVSASLLLVVFKLLPNNPVLASSLGLGLS 180

Query: 181 ASLLVVMGSRFKNSGKIFPAGIVSLVSFVMTGGYMHGILRSAH 200
           ASLLVVMGSRFKNSGKIFPAGIVSLVSF+MTGGYMHGILRS+H
Sbjct: 181 ASLLVVMGSRFKNSGKIFPAGIVSLVSFIMTGGYMHGILRSSH 220

[Close]

BLAST of Cp4.1LG18g02880 vs. NCBI nr
Match: gi|659100205|ref|XP_008450981.1| (PREDICTED: uncharacterized protein LOC103492404 [Cucumis melo])

HSP 1 Score: 261.5 bits (667), Expect = 1.2e-66
Identity = 163/223 (73.09%), Postives = 175/223 (78.48%), Query Frame = 1


Query: 1   MAEVLAGVSQASLVFRPRVGGALRSNNFSIRRLQFQSTIGRGISFDCKKVVSAIRATDSE 60
           MAEVLAGVSQASL FRPR+GG LRSN FS++RLQFQSTIGRGISFDCK VVSAIRATDS+
Sbjct: 1   MAEVLAGVSQASLFFRPRLGGTLRSNKFSVKRLQFQSTIGRGISFDCKTVVSAIRATDSK 60

Query: 61  N-DIEIYPDATGGDSSDKGIHGDGGGGSGGGKGGRGDNDGNSGEGEESNDSSRKKALSMS 120
           N DI+IYPD TGGDSSDKGI   GGGGSGGG GGRGDN+GNSGEGEESN  SRKKALSMS
Sbjct: 61  NEDIDIYPDTTGGDSSDKGI---GGGGSGGGDGGRGDNEGNSGEGEESNADSRKKALSMS 120

Query: 121 QKLTLGYAALVGE----------FSECLLW-----SLLVAV--------AVEYKGKRGLS 180
           QKLTLGYAALVG             + LL      SLL+ V         +      GLS
Sbjct: 121 QKLTLGYAALVGVGGLMGYLKGGSQKSLLAGGVSASLLLVVFKLLPDNPVLASSLGLGLS 180

Query: 181 ASLLVVMGSRFKNSGKIFPAGIVSLVSFVMTGGYMHGILRSAH 200
           A+LLVVMGSRFKNSGKIFPAGIVSLVSF+MTGGYMHGILRS+H
Sbjct: 181 AALLVVMGSRFKNSGKIFPAGIVSLVSFIMTGGYMHGILRSSH 220

[Close]

BLAST of Cp4.1LG18g02880 vs. NCBI nr
Match: gi|1009142879|ref|XP_015888960.1| (PREDICTED: protein FATTY ACID EXPORT 2, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 125.2 bits (313), Expect = 1.3e-25
Identity = 107/247 (43.32%), Postives = 133/247 (53.85%), Query Frame = 1


Query: 1   MAEVLAGVSQASLVFRPRVG-------GALRSNNFSIRRLQ------------FQSTIGR 60
           MAE L GVSQ+SL+ RP++G       G+  S++   RRL             FQ++ G 
Sbjct: 1   MAETLCGVSQSSLLLRPKIGLLHSDNRGSSISSSGGGRRLLQSSPLKLSRHQGFQASFGF 60

Query: 61  GISFDCKKVVSAIRATDSENDIEIYPDATGGDSS-DKGIHGDGGG----GSGGGKGGRGD 120
             S      V  +    + +++ +       D   D G  G GGG    G GGG+GG G 
Sbjct: 61  STSRQDSISVGVVSGPTASSNLSVDSGTKEVDIELDSGSGGGGGGSAGDGDGGGRGGGGG 120

Query: 121 NDGNSGEGEESNDSSRKK-ALSMSQKLTLGYAALVGE----------FSECLLWSLLVAV 180
             GN GEGE+ +D  +KK ALSMSQKLTLGYAALVG             + LL   L A 
Sbjct: 121 GGGNEGEGEDRSDGKKKKMALSMSQKLTLGYAALVGVGGLMGYLKSGSQKSLLSGGLSAA 180

Query: 181 AVEYKGKR-------------GLSASLLVVMGSRFKNSGKIFPAGIVSLVSFVMTGGYMH 200
            + Y   +             GLSA+LL VMGSRFK+SGKIFPAG+VSLVS VMTGGY+H
Sbjct: 181 VLYYVYTKLPTSPVVASSIGFGLSAALLFVMGSRFKSSGKIFPAGVVSLVSLVMTGGYLH 240

[Close]

BLAST of Cp4.1LG18g02880 vs. NCBI nr
Match: gi|703139947|ref|XP_010107104.1| (UPF0136 membrane protein [Morus notabilis])

HSP 1 Score: 123.2 bits (308), Expect = 5.0e-25
Identity = 111/252 (44.05%), Postives = 136/252 (53.97%), Query Frame = 1


Query: 1   MAEVLAGVSQASLVFRPRVGGALR-----------SNNFSIRRLQ-----FQSTIGRGIS 60
           MAEVL GVSQ+SL+  P++G +             SN     R Q     F S+  R + 
Sbjct: 1   MAEVLFGVSQSSLLLHPKIGFSCGRAISPGLPSPPSNPVGTARYQLFGTSFGSSRLRSVH 60

Query: 61  FD--CKKVVSAIRAT-----DSEN-DIEIYP------DATGGDSSDKGIHGDGGGGSGGG 120
            +  C  +VS  +A+     DSEN ++EI        D  GGD    G  GD GGG  GG
Sbjct: 61  RNPLCAAIVSDTKASNTFTVDSENKEVEIESGTGVESDTGGGDGDGFGDRGDSGGG--GG 120

Query: 121 KGGRGDNDGNSGEGEESNDSSRKKALSMSQKLTLGYAALVGE----------FSECLLWS 180
           +GG  + D   G+GE    S +K ALSMSQKLTLGYAALVG             + LL  
Sbjct: 121 RGGDSNRDKGDGDGESHEKSEKKMALSMSQKLTLGYAALVGVGGLMGYLKSGSQKSLLAG 180

Query: 181 LLVAVAVEYKGKR-------------GLSASLLVVMGSRFKNSGKIFPAGIVSLVSFVMT 200
            + A  + Y   +             GLSA+LL VMGSRFK+SGKIFPAG+VSLVS VMT
Sbjct: 181 GISASLLYYVHTQLPTNPVFASTLGLGLSAALLGVMGSRFKSSGKIFPAGVVSLVSLVMT 240

[Close]

BLAST of Cp4.1LG18g02880 vs. NCBI nr
Match: gi|645273973|ref|XP_008242132.1| (PREDICTED: protein argonaute 12 [Prunus mume])

HSP 1 Score: 120.9 bits (302), Expect = 2.5e-24
Identity = 111/238 (46.64%), Postives = 128/238 (53.78%), Query Frame = 1


Query: 8   VSQASLVFRPRVGGALRSNNFSI---RRLQFQSTIGRGISFDCKKVV------------- 67
           VSQ+SLV RP++G AL + N SI   RRLQ  +   RG        +             
Sbjct: 5   VSQSSLVLRPKIG-ALHNLNTSISPARRLQHNNLSYRGFGASSDNALLLRHASIQKLGVV 64

Query: 68  -----SAIRATDSE-NDIEIYPDATGGDSSDKGIHGDGGGGSGGGKGGRGDNDGNSGEGE 127
                S I   DS   DI I P ATGG     G  GD GG  GGG GG GDN  + GEGE
Sbjct: 65  SDTKSSTIFTVDSGIKDIGIEP-ATGGG----GGGGDFGGRGGGGGGGGGDNSDDKGEGE 124

Query: 128 ESNDSSR-KKALSMSQKLTLGYAALVGE---------------FSECLLWSLLVAVAVEY 187
           E  +  R KK +SMSQKLTLGYAALVG                 +  L  +LLV V+ E 
Sbjct: 125 EGPEEKREKKGMSMSQKLTLGYAALVGVGGLMGFLKSGSQKSLLAGGLSAALLVYVSTEL 184

Query: 188 KGKR--------GLSASLLVVMGSRFKNSGKIFPAGIVSLVSFVMTGGYMHGILRSAH 200
             +         GLSA+LL VMGSRFK SGK+FPAG+VSLVS VMTGGY+HGILR  H
Sbjct: 185 PVRPVFASSIGLGLSAALLGVMGSRFKKSGKVFPAGVVSLVSLVMTGGYLHGILRGMH 236

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g02880 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FAX2_ARATH	1.1e-13	41.08	Protein FATTY ACID EXPORT 2, chloroplastic OS=Arabidopsis thaliana GN=FAX2 PE=2 ...	[more]
FAX7_ARATH	7.9e-07	38.10	Protein FATTY ACID EXPORT 7 OS=Arabidopsis thaliana GN=FAX7 PE=3 SV=1	[more]

BLAST of Cp4.1LG18g02880 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M2B1_CUCSA	2.5e-68	73.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G598860 PE=4 SV=1	[more]
W9S3X9_9ROSA	3.5e-25	44.05	UPF0136 membrane protein OS=Morus notabilis GN=L484_019582 PE=4 SV=1	[more]
M5WA80_PRUPE	2.5e-23	45.80	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010755mg PE=4 SV=1	[more]
A0A061GSK8_THECC	5.5e-23	43.16	Transmembrane proteins 14C OS=Theobroma cacao GN=TCM_037428 PE=4 SV=1	[more]
A0A0D2N4I2_GOSRA	8.0e-22	43.59	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G018900 PE=4 SV=1	[more]

BLAST of Cp4.1LG18g02880 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G43520.1	6.4e-15	41.08	Transmembrane proteins 14C	[more]
AT2G26240.1	4.5e-08	38.10	Transmembrane proteins 14C	[more]

BLAST of Cp4.1LG18g02880 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452628\|ref\|XP_004144061.1\|	3.6e-68	73.54	PREDICTED: neurogenic protein mastermind [Cucumis sativus]	[more]
gi\|659100205\|ref\|XP_008450981.1\|	1.2e-66	73.09	PREDICTED: uncharacterized protein LOC103492404 [Cucumis melo]	[more]
gi\|1009142879\|ref\|XP_015888960.1\|	1.3e-25	43.32	PREDICTED: protein FATTY ACID EXPORT 2, chloroplastic [Ziziphus jujuba]	[more]
gi\|703139947\|ref\|XP_010107104.1\|	5.0e-25	44.05	UPF0136 membrane protein [Morus notabilis]	[more]
gi\|645273973\|ref\|XP_008242132.1\|	2.5e-24	46.64	PREDICTED: protein argonaute 12 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR005349	TMEM14

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g02880.1	Cp4.1LG18g02880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005349	TMEM14 family	PANTHER	PTHR12668	TRANSMEMBRANE PROTEIN 14, 15	coord: 31..199 score: 1.0
IPR005349	TMEM14 family	PFAM	PF03647	Tmemb_14	coord: 141..190 score: 3.
None	No IPR available	PANTHER	PTHR12668:SF5	UPF0136 MEMBRANE PROTEIN YJR085C	coord: 31..199 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG18g02880	Cucsa.142140	Cucumber (Gy14) v1	cgycpeB0383
Cp4.1LG18g02880	CmaCh10G008010	Cucurbita maxima (Rimu)	cmacpeB080
Cp4.1LG18g02880	CmaCh11G007670	Cucurbita maxima (Rimu)	cmacpeB132
Cp4.1LG18g02880	CmoCh10G008280	Cucurbita moschata (Rifu)	cmocpeB055
Cp4.1LG18g02880	CmoCh11G007760	Cucurbita moschata (Rifu)	cmocpeB108
Cp4.1LG18g02880	Csa1G598860	Cucumber (Chinese Long) v2	cpecuB362
Cp4.1LG18g02880	MELO3C015559	Melon (DHL92) v3.5.1	cpemeB335
Cp4.1LG18g02880	ClCG03G014690	Watermelon (Charleston Gray)	cpewcgB321
Cp4.1LG18g02880	CSPI01G29100	Wild cucumber (PI 183967)	cpecpiB362
Cp4.1LG18g02880	Lsi06G003770	Bottle gourd (USVL1VR-Ls)	cpelsiB305
Cp4.1LG18g02880	MELO3C015559.2	Melon (DHL92) v3.6.1	cpemedB393
Cp4.1LG18g02880	CsaV3_1G041480	Cucumber (Chinese Long) v3	cpecucB0443
Cp4.1LG18g02880	Bhi02G001469	Wax gourd	cpewgoB0458
Cp4.1LG18g02880	CsGy1G028310	Cucumber (Gy14) v2	cgybcpeB054
Cp4.1LG18g02880	Carg25195	Silver-seed gourd	carcpeB0706
Cp4.1LG18g02880	Carg12924	Silver-seed gourd	carcpeB0138

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG18g02880	Cp4.1LG04g11340	Cucurbita pepo (Zucchini)	cpecpeB360

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG18g02880	Watermelon (97103) v1	cpewmB349