Cp4.1LG18g02510 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG18g02510
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionZinc finger CCCH domain-containing protein ZFN-like protein
LocationCp4.1LG18 : 4223686 .. 4230084 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCACTACCACCACTGAAAAAGAGAAAAGGCTAAAATGTTAGCAGGAATCTGATGAACGTGGCGTAACCAAAGCGAGAGTTAATTCTAAATCTCCTAATCGCGAGAGTCTTCAAATCTTCGTCGTCCGTTTTTCGTCTCTAAAGATCGTCAGCAACAATGGAGGGACGGATGTTTTGGTTGGTTTCGTTACTCTATTCTCTCTCTTTTTAGTTTTTTTGTGTGGAGAGGAGAAGACAACGCCCTTTCCTTTCTTTCTCTCTCCCTCTCTCTCTCTAAAAAAACCCACTTACTGAAATCGTCAATCAATCCCCATATACATAACTTTTCGTTTCGATTCTCTGTTTCCCCCCCTTTTTTTGGTTTTGGGAAGGAAATTGGATGGTGGGTTTTTGATTTTTGTCGAAATTGGTGCTCTGGTGGTGGTGGGTTGTGGTGGAAATGGGGATTTGGGTGGTGGGTTTTGATGGGATGAGTTCTTCGCCGGCGATGAGGCGGTGATTTCAGGACCATGTTCCTCTGCGATGGAGTACGATTCTGGAATTCCGATGTCTGTGACGGAGGGACACTCCTNCTACCACCACTGAAAAAGAGAAAAGGCTAAAATGTTAGCAGGAATCTGATGAACGTGGCGTAACCAAAGCGAGAGTTAATTCTAAATCTCCTAATCGCGAGAGTCTTCAAATCTTCGTCGTCCGTTTTTCGTCTCTAAAGATCGTCAGCAACAATGGAGGGACGGATGTTTTGGTTGGTTTCGTTACTCTATTCTCTCTCTTTTTAGTTTTTTTGTGTGGAGAGGAGAAGACAACGCCCTTTCCTTTCTTTCTCTCTCCCTCTCTCTCTCTAAAAAAACCCACTTACTGAAATCGTCAATCAATCCCCATATACATAACTTTTCGTTTCGATTCTCTGTTTCCCCCCCTTTTTTTGGTTTTGGGAAGGAAATTGGATGGTGGGTTTTTGATTTTTGTCGAAATTGGTGCTCTGGTGGTGGTGGGTTGTGGTGGAAATGGGGATTTGGGTGGTGGGTTTTGATGGGATGAGTTCTTCGCCGGCGATGAGGCGGTGATTTCAGGACCATGTTCCTCTGCGATGGAGTACGATTCTGGAATTCCGATGTCTGTGACGGAGGGACACTCCTCTGCTCTCACACCATCCTTGCGCGAAGGTTCTCTTGCTAATTTCGGTATCGTTTATTCGTTTCTTTTTCCCCCTTTTCCCTTTTGCAGATTGCAATTTCTTCTTACTCTCTCTCTTTTTGTTGTTTGCTTATCTGGGTTTTTGTGATGTGTTTGACTCATCCATTTCGATGTGCACATACTCTTATCTGATTGTTTTCTACGTTAATCCTCTGCTTTGCCCATGTCTTGCATCGAGTTTTCGTTTCGATCTGTGGTGTATGCCTCTGTTTTGCTGGATTTTTGTTCGTGGTTGTTGTTTTTTTGGTCTCGAATGATCCCGAGGAAGAGATTTAATTAAATTCCTGATACATTTCCGGTTCATATCTTTGTCTCAATCTCCATTGGAGGCACGATGGTTGCTCTGATGATGGTATGATCCATATAAAATGTTATTTCGTAAATTTTTACCCATTATACGTTTGTAATGTTTACAAAATTTCTGTGGAATAGAAAGTGGTTGATCCATCTTATACTCAGCTGCTTCCAGCCTCTTCTGCTTTTTATGGCAAAACTTTTGGATTCTAGACTTGGAAAGTTGAGATGCTCCCTTGAAGTTATGAGGTTCATTTTATAATGAATGTAATCGAGAATCACAAGAAAACAAAACAAAACAAAACAAAAACACAAGGATCCTTCTAGATTGGAAGGTGTTTTTGTAAGTAGTTCTTGTTGGGAGGGAGAGCCCTCTTCCCCGGCCTCTAAGTTGTCTTTCGTGTAATGCATCTTTTAAGTTTCGTTTCAAAAAAGTGCAAGTAAAAGTCCTTGATTGAAAAAGTTGTATTCGTTTAATGGGTTCGTCGACAAAGGTCCCAATTCGGTTGCATTATGAGACAGCTTAAGATGTTCTAAATGATAAAGCATTTGAAGAGGTTTTATCTACTTTTGGTTTAGCTTTTTGCTGTTTGGTTTGGTCTTAATGGGTCGTCATTTTAGTTTTTCGTTCAGACTCTTGTATTTTCGTCTTTGTTGTTGGACGTTTTAATCTATTTCCCTTTGGGTGGTTGTATCCTTGAATACTGTTCTTCCTTTTCGTCCACCGCTGAGAAGTTTGTACTTGTTAAGAAGAAAATGTGTGGATCCCTTTCCTGTTTATATCTGGCTATGTGCTCTCTTTCACAAGGTAATCCAAAAGAGTCATTATTTGTGTCACATCTCAAGAGAAAGCTTTCCGGTTATCTCTCAAATTATAGGCATTGAAGCGATTGAGCGGTAGAAAGAAATAAAACTTTGCACACACCTCTCATTCTCCCTTTATTGATATAATAGAAAGCTTAAGCCCTTTCGATTGATCACGTGAGAAGCCCTCAATGAACTGCCTATAGTATAATATATACTAATCCGAGGAAGAATTGTAGTTTCTGCACCTTGCGTGATGTCTCCCAGTCCATCACGACTTGCATGCACCTTCTCTTGTTCCAACCAACTCATGTTGTCGCCCATCCAGTGCCCAAGGAACTAGACCTTATGCAAAGAACTAGTTAATCACCTTCTCAACCTGGTTCTAAGTGATAAGGAATTAAGAATTAACTATAGTTATGGAATCAAGAAATGAATTTCGGAGGATCATAACGTGACTTATCGAAGTGCTTTACTTCGAAGAACAACAAAAAAAAGGCTCTTTTAGTGTTGTGTGTTTCCTATCAGCTATGTTGAAGCTTTTTGTAACATTCTTTTGTGCGTTCTTCTCTCCGATCATAATCAAAATGGACTGTGTTCTGACTAAGGAAGCGTATTAGCTAGGGGAAGGCGGGAAATCTTTTTAGGCATTGTAAAAATGGTTTTGTATATTACTTTGTACAATTGCCTCAAGGATGCAATGGTACTCATATTACTATTCTATTCTTGGGCGTTCTATGCATTTATTCCGTTCACGCACCGCAAACTTCTATCTATTCATCATTTTCAATTCCACTTTGAATTGTGAATTTTCTCCATTGCTTCCCCGAACCATATATTCGAGCATATCTAACTATATTTTAGTTTTTGTTCGTACGTGAGCTTCATATATTTAGAATAGTATAGGTATCAAGTTTTGTGTCTTCAATATATTTTTCTTCTTTATAATGGGAGACTTACTTATCTAATGTCATACCAGATGCACTGTGGCAAATGAACTTAGGATCAGGTGAAATAATGGGATCTGGATCTTATCCCGTGCGACCCGGAGAGCCAGACTGTTCTTATTACATCAGAACTGGCCTATGCAGATTTGGAGCTACGTGTAGATTTAATCATCCACCTAATAGGGAGCTGGTAATAAGCCGAAATGTGAATCTTTTAGTTTCTTAATTTATCGTCATTTTATGTTCTAAACATGCTAACTGAACGAACTGAACGGCTTTGGAGCTTCCCTAAAGTTGTTTATACTTAGTGGATAGAGCTATGAGTAGGAAATTAAAAGTGGTAAAACTTGTTTGTAACCTTAACTCGATGAACCTACTCGTCTCTCCGTTCATTCATTCACCTCACACTGTATAAGCCTGAAGCTAAAGATTTGAAATCATTTTATTCGCACAACAGGTTTGTCCTTGCACACACCGACCTTTTTTTTTAACTCGATTATGTGCTGAACTAAAAATAACAGATTATTCATCTACAGTATTTGAGAGTCGTTCTTGAAAATTTACAATTCATCTTGTGATGGAGTCATCCGTGATTTACTACACTTTACGTTCAGGCTATTGCCACTGCAAGAATGAAGGGGGAGTTCCCGGAAAGAATTGGACAACCAGAATGCCAGGCACGTACTTTTTTAATTAACGTATTACATCATGCGACATTTTATTCATTATAAATCTGCATATCAACATTTGGTTTTAGAGGTTTCGGTTTTGGTTTGGATTCAGGTCGTTTGTGTGACTTCGTAATACGATAGGTTTCTGTTGTTTTTTCAAGTTTTGGGGACTTCTTTTGCAACCTTTGTACTGTATAAATGAAATGTCCTTTTAAAAGAAAACACGGAAAGGAAAACCTGCACGTCATCATTAAGCTCCTAGCTACGTCGATGAGTAAACTATAACATGTTCAAGTTAATATGATGATTACATACTTCGACGGGACGAAGAAAAGAGAATTTAGGTGATCTTATTTACCTCTAGATGGTTTCTTGTAATTTTATGGTGTATAAAGTTAAGGAGATCAATGACGAGAATGATGTGATCGTTCACATAACATAGCAAGCTAATACCGGTTAAAGCACCTTAGAACTTCCTCCGAGAGACAGCCGAGAGTATTTCCATTCGATAATTACTTGGTCGAAGAATATAATCAGTTCATTAGCTAATGGGATGTACTTATTTATCTCATATGTATATCAGGAATATTATTTTTTATGGTTCGGTTTGGTTTAGAATAACAAGGTCTCGGATATTATATTGTTTCGCTGGGTCTTGATTGACTCTTGACTTTTGTGGATGCTTAGCTTTATAAGAACTTAAATGGGCTCTAAACGGTCGAAGTATAGAACGTTTCCTTTATTTTTTACTATGATAATGACGTTTTCATTTGCACGTAATCCAGTACTACCTGAAGACAGGAACTTGCAAGTTCGGGGCTACGTGCAAGTTTCATCATCCTAGAGACAAGGCTGGGATTGCTGGAAGAGTTGCCTTAAATATTATTGGCTATCCACTTCGCCCGGTTAGGATACAACTTCTCCCTTTTAAAGATCTTCGATTGTCGAGCTACCTATGCTTTTATGCTAAAAATATTCATTGTTCATCCTCTCCTCCTCACTTCCAATTGTGCAGAGTGAACCTGAATGTGCTTATTATATAAGAACTGGACAATGTAAGTTCGGAAATACATGTAAATTCCACCATCCTCAACCGACTAATATGATGGTCTCACTGCGCGGTTCTCCTATTTATCCAACCGTACAATCGCCAACTCCTGGTCAGCAATCATATCCAGGAGGAAGTACAAATTGGTCGAGGGCGTCGTTCATTCCTAGTCCACGATGGGAAGGCCCTTCCAGTTATGCATCTTTAATATTACCTCAGGGAGTTCTTTCTGTTCCAGGTTGGAATGCATTCAATGTAAGTCTTATTCCTTACCCATGTTTGGCATAAGTCTGGTGTATATATTGTTATGTTTGTTTACTTGAAAGTCGATGGTTCGATCTCCTCCTCGCAATTGTTGAACTCAAAAATATATATGTTATATGTGTGTGTATACGTTCAGCAGCTTTCGGGGGGGGGTTTTTTTCCTTTGTCTTCTGCCAATTACGTTTCGAAGAAGGTTCAATGGTGGCTGCTACACCCTCTAGTGGATAAATGTTCAGTCTATCGCTTCGTTTTACCCTTAAGTAACATAAGATGGTGATTTTTACAGGATCAGCTCGGATCGGTTTCATCTTCAGAAAGTCCACAACAAACGGTAGGACGAGTGACTGAGTTAATGCAGGATCTGTAGCAGTCTCTTCTCCGATACGTTCTAACCGTCCTATTTGGGTTTTTTGACATTGCAGAGGGAGAATGTATTCCCTGAGAGACCTGGCCAGCCTGAATGTCAGTTTTATATGAAGACTGGAGATTGCAAGTTCGGTGCCGTTTGTCGATTTCATCATCCCAGAGAAAGAGTACTTCCTGCCCCAGATTGTGTCTTGAGTCCTATAGGCCTGCCGTTACGTCCGGTGAGTTAGTCGTGATGAAATAGCTACTTTGATGTTCTAATTTACGCGGCGATATGTGGATCTGTAGATTAGAGACCCTTTTCCTGGTTTGATTCAATTCAAGTATGTTCTAACTAATATTAACACGAACAGGGAGAACCTTTGTGCATCTTCTATTCTCGTTACGGGATCTGTAAGTTCGGTCCAAGCTGCAAGTTCGATCACCCTATGGGAATCTTCACATACAATCTCTCAGCAGCAGCAGCAGCAGCAGCATCATCAGCCAACGCCCCAGTTCAGCATTTGTTTGGGACGTCTTCAGGATCAACTGCACTGAACTTGTCATCTGAAGGGCTAGTCGAAGCAGGATCTGCAAAACCGAGACGACTATCAATCTCGGAGACGCGAGAGATGCCATCTGACGACGAAAATATCGACACAGAAGGCTGAACACCGCCTTTTTACTCCTTTTACAATCTTTTGGAAGATAAAAAGAAGAAGAAGAAGAAGAGGTATTTGTAAATTCATTATGCCTTGCCTTGCAGGAAGGAAAAAAGATGTACAGGAGGGAGGGTTCATGTAAAGTTGATCCTGTTTTTTATGTCTGA

mRNA sequence

TGCACTACCACCACTGAAAAAGAGAAAAGGCTAAAATGTTAGCAGGAATCTGATGAACGTGGCGTAACCAAAGCGAGAGTTAATTCTAAATCTCCTAATCGCGAGAGTCTTCAAATCTTCGTCGTCCGTTTTTCGTCTCTAAAGATCGTCAGCAACAATGGAGGGACGGATGTTTTGGTTGGTTTCGTTACTCTATTCTCTCTCTTTTTAGTTTTTTTGTGTGGAGAGGAGAAGACAACGCCCTTTCCTTTCTTTCTCTCTCCCTCTCTCTCTCTAAAAAAACCCACTTACTGAAATCGTCAATCAATCCCCATATACATAACTTTTCGTTTCGATTCTCTGTTTCCCCCCCTTTTTTTGGTTTTGGGAAGGAAATTGGATGGTGGGTTTTTGATTTTTGTCGAAATTGGTGCTCTGGTGGTGGTGGGTTGTGGTGGAAATGGGGATTTGGGTGGTGGGTTTTGATGGGATGAGTTCTTCGCCGGCGATGAGGCGGTGATTTCAGGACCATGTTCCTCTGCGATGGAGTACGATTCTGGAATTCCGATGTCTGTGACGGAGGGACACTCCTNCTACCACCACTGAAAAAGAGAAAAGGCTAAAATGTTAGCAGGAATCTGATGAACGTGGCGTAACCAAAGCGAGAGTTAATTCTAAATCTCCTAATCGCGAGAGTCTTCAAATCTTCGTCGTCCGTTTTTCGTCTCTAAAGATCGTCAGCAACAATGGAGGGACGGATGTTTTGGTTGGTTTCGTTACTCTATTCTCTCTCTTTTTAGTTTTTTTGTGTGGAGAGGAGAAGACAACGCCCTTTCCTTTCTTTCTCTCTCCCTCTCTCTCTCTAAAAAAACCCACTTACTGAAATCGTCAATCAATCCCCATATACATAACTTTTCGTTTCGATTCTCTGTTTCCCCCCCTTTTTTTGGTTTTGGGAAGGAAATTGGATGGTGGGTTTTTGATTTTTGTCGAAATTGGTGCTCTGGTGGTGGTGGGTTGTGGTGGAAATGGGGATTTGGGTGGTGGGTTTTGATGGGATGAGTTCTTCGCCGGCGATGAGGCGGTGATTTCAGGACCATGTTCCTCTGCGATGGAGTACGATTCTGGAATTCCGATGTCTGTGACGGAGGGACACTCCTCTGCTCTCACACCATCCTTGCGCGAAGGTTCTCTTGCTAATTTCGATGCACTGTGGCAAATGAACTTAGGATCAGGTGAAATAATGGGATCTGGATCTTATCCCGTGCGACCCGGAGAGCCAGACTGTTCTTATTACATCAGAACTGGCCTATGCAGATTTGGAGCTACGTGTAGATTTAATCATCCACCTAATAGGGAGCTGTACTACCTGAAGACAGGAACTTGCAAGTTCGGGGCTACGTGCAAGTTTCATCATCCTAGAGACAAGGCTGGGATTGCTGGAAGAGTTGCCTTAAATATTATTGGCTATCCACTTCGCCCGAGTGAACCTGAATGTGCTTATTATATAAGAACTGGACAATGTAAGTTCGGAAATACATGTAAATTCCACCATCCTCAACCGACTAATATGATGGTCTCACTGCGCGGTTCTCCTATTTATCCAACCGTACAATCGCCAACTCCTGGTCAGCAATCATATCCAGGAGGAAGTACAAATTGGTCGAGGGCGTCGTTCATTCCTAGTCCACGATGGGAAGGCCCTTCCAGTTATGCATCTTTAATATTACCTCAGGGAGTTCTTTCTGTTCCAGGTTGGAATGCATTCAATGATCAGCTCGGATCGGTTTCATCTTCAGAAAGTCCACAACAAACGAGGGAGAATGTATTCCCTGAGAGACCTGGCCAGCCTGAATGTCAGTTTTATATGAAGACTGGAGATTGCAAGTTCGGTGCCGTTTGTCGATTTCATCATCCCAGAGAAAGAGTACTTCCTGCCCCAGATTGTGTCTTGAGTCCTATAGGCCTGCCGTTACGTCCGGAAGGAAAAAAGATGTACAGGAGGGAGGGTTCATGTAAAGTTGATCCTGTTTTTTATGTCTGA

Coding sequence (CDS)

ATGGAGTACGATTCTGGAATTCCGATGTCTGTGACGGAGGGACACTCCTCTGCTCTCACACCATCCTTGCGCGAAGGTTCTCTTGCTAATTTCGATGCACTGTGGCAAATGAACTTAGGATCAGGTGAAATAATGGGATCTGGATCTTATCCCGTGCGACCCGGAGAGCCAGACTGTTCTTATTACATCAGAACTGGCCTATGCAGATTTGGAGCTACGTGTAGATTTAATCATCCACCTAATAGGGAGCTGTACTACCTGAAGACAGGAACTTGCAAGTTCGGGGCTACGTGCAAGTTTCATCATCCTAGAGACAAGGCTGGGATTGCTGGAAGAGTTGCCTTAAATATTATTGGCTATCCACTTCGCCCGAGTGAACCTGAATGTGCTTATTATATAAGAACTGGACAATGTAAGTTCGGAAATACATGTAAATTCCACCATCCTCAACCGACTAATATGATGGTCTCACTGCGCGGTTCTCCTATTTATCCAACCGTACAATCGCCAACTCCTGGTCAGCAATCATATCCAGGAGGAAGTACAAATTGGTCGAGGGCGTCGTTCATTCCTAGTCCACGATGGGAAGGCCCTTCCAGTTATGCATCTTTAATATTACCTCAGGGAGTTCTTTCTGTTCCAGGTTGGAATGCATTCAATGATCAGCTCGGATCGGTTTCATCTTCAGAAAGTCCACAACAAACGAGGGAGAATGTATTCCCTGAGAGACCTGGCCAGCCTGAATGTCAGTTTTATATGAAGACTGGAGATTGCAAGTTCGGTGCCGTTTGTCGATTTCATCATCCCAGAGAAAGAGTACTTCCTGCCCCAGATTGTGTCTTGAGTCCTATAGGCCTGCCGTTACGTCCGGAAGGAAAAAAGATGTACAGGAGGGAGGGTTCATGTAAAGTTGATCCTGTTTTTTATGTCTGA

Protein sequence

MEYDSGIPMSVTEGHSSALTPSLREGSLANFDALWQMNLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNIIGYPLRPSEPECAYYIRTGQCKFGNTCKFHHPQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPSPRWEGPSSYASLILPQGVLSVPGWNAFNDQLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERVLPAPDCVLSPIGLPLRPEGKKMYRREGSCKVDPVFYV
Homology
[Close]
BLAST of Cp4.1LG18g02510 vs. Swiss-Prot
Match: ZFNL_PEA (Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 5.1e-93
Identity = 176/327 (53.82%), Postives = 207/327 (63.30%), Query Frame = 1 

Query: 24  REGSLANFDALWQMNLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRE 83
           R G+   F+      L        G +P R G+P+C Y                      
Sbjct: 46  RFGATCRFNHPPNRKLAIATARMKGEFPERLGQPECQY---------------------- 105

Query: 84  LYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNIIGYPLRPSEPECAYYIRTGQCKFGNT 143
             YLKTGTCKFGATC+FHHP+DKAG+AGRVALNI+GYPLRP+E E AYY+RTGQCKFGNT
Sbjct: 106 --YLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESERAYYLRTGQCKFGNT 165

Query: 144 CKFHHPQPTNMMVSLRGSPIYPTVQSP-TPGQQSYPGGSTNWSRASFIPSPRWEGPSSYA 203
           CKFHHPQP+NM++S+RGS +YPTVQSP TPGQQSY  G TNWS +S++PSPRW+GPSSYA
Sbjct: 166 CKFHHPQPSNMVLSMRGSTVYPTVQSPTTPGQQSYAAGITNWSSSSYVPSPRWQGPSSYA 225

Query: 204 SLILPQGVLSVPGWNAFNDQLGSVSSSESPQQTREN-------------------VFPER 263
            LILPQGV+SVPGW+ +  Q+G    SESPQQT  N                    + + 
Sbjct: 226 PLILPQGVVSVPGWSTYGGQMG----SESPQQTMRNDQTYGTSHQGELENAGLQGAYSQY 285

Query: 264 ------------------PGQPEC---QFYMKTGDCKFGAVCRFHHPRERVLPAPDCVLS 307
                             P +P+    QFYMKTGDCKFGAVCRFHHPRER +PAPDCVLS
Sbjct: 286 RSGSVPVGFYALQRDNIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRERQIPAPDCVLS 343

[Close]
BLAST of Cp4.1LG18g02510 vs. Swiss-Prot
Match: C3H63_ORYSJ (Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa subsp. japonica GN=Os11g0472000 PE=2 SV=2)

HSP 1 Score: 292.7 bits (748), Expect = 4.6e-78
Identity = 149/303 (49.17%), Postives = 178/303 (58.75%), Query Frame = 1 

Query: 48  GSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELYYLKTGTCKFGATCKFHHPRDKA 107
           G YP R G+P+C YY                        LKTGTCKFGATCKFHHPR+KA
Sbjct: 96  GEYPQRIGQPECQYY------------------------LKTGTCKFGATCKFHHPREKA 155

Query: 108 GIAGRVALNIIGYPLRPSEPECAYYIRTGQCKFGNTCKFHHPQPTNMMVSLRGSPIYPTV 167
            IA RV LN +GYPLRP+E ECAYY+RTGQCKFG+TCKFHHPQP+N MV++RGS   P  
Sbjct: 156 AIATRVQLNALGYPLRPNEKECAYYLRTGQCKFGSTCKFHHPQPSNTMVAVRGSVYSPGQ 215

Query: 168 QSPTPGQQSYPGGSTNW---SRASFIPSPRWEGPSSYASLILPQGVLSVPGWNAFNDQLG 227
              +P Q +YPG  TNW     ASFI SPRW G SSYA +I+P G++ VPGWN +  Q+G
Sbjct: 216 SVTSPSQHTYPGAVTNWPLSRSASFIASPRWPGHSSYAQVIVPPGLVQVPGWNPYAAQIG 275

Query: 228 SVSS------------------SESPQQTRENVFPER------------------PGQPE 287
           S SS                  SE+P    + +F                     P +P+
Sbjct: 276 SSSSDDQQRTAGGAQYYTGSRHSETPNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPD 335

Query: 288 C---QFYMKTGDCKFGAVCRFHHPRERVLPAPDCVLSPIGLPLRPEGK--KMYRREGSCK 307
               QFYMKTGDCKFGAVC+FHHP+ER++P P+C LS +GLPLRP       Y R G CK
Sbjct: 336 QPECQFYMKTGDCKFGAVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICK 374

[Close]
BLAST of Cp4.1LG18g02510 vs. Swiss-Prot
Match: C3H66_ORYSJ (Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica GN=Os12g0405100 PE=2 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.1e-76
Identity = 146/307 (47.56%), Postives = 182/307 (59.28%), Query Frame = 1 

Query: 47  SGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELYYLKTGTCKFGATCKFHHPRDK 106
           +G YP R G+P+C YY                        LKTGTCKFGATCKFHHPR+K
Sbjct: 105 NGEYPYRVGQPECQYY------------------------LKTGTCKFGATCKFHHPREK 164

Query: 107 AGIAGRVALNIIGYPLRPSEPECAYYIRTGQCKFGNTCKFHHPQPTNMMVSLRGSPIYPT 166
           A +A RV LN++GYP+RP+E ECAYY+RTGQCKF +TCKFHHPQP+N MV++R S   P 
Sbjct: 165 AALANRVQLNVLGYPMRPNEKECAYYLRTGQCKFASTCKFHHPQPSNTMVAVRNSMYSPG 224

Query: 167 VQSPTPGQQSYPGGSTNWS---RASFIPSPRWEGPSSYASLILPQGVLSVPGWNAFNDQL 226
             + +PGQ +YPG  TNW+    ASFI SPRW G S YA +I+PQG++ VPGWN +  Q+
Sbjct: 225 QSATSPGQHTYPGAVTNWTLSRSASFIASPRWPGHSGYAQVIVPQGLVQVPGWNPYAAQM 284

Query: 227 GSVSSSESPQQT---------------------------------------RENVFPERP 286
           GS SS +  Q+T                                        EN+    P
Sbjct: 285 GS-SSPDDQQRTPVTTQYYGSRQSETGGMGDHGMYQSYQGGSVPVGVYTVQGENI---FP 344

Query: 287 GQPEC---QFYMKTGDCKFGAVCRFHHPRERVLPAPDCVLSPIGLPLRPEGK--KMYRRE 307
            +P+    QFYMKTGDCKFGAVC+FHHP+ER++PAP+C L+ +GLPLRP       Y R 
Sbjct: 345 ERPDQPECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLRPGEPVCTFYSRY 383

[Close]
BLAST of Cp4.1LG18g02510 vs. Swiss-Prot
Match: C3H33_ARATH (Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis thaliana GN=ZFN1 PE=1 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.8e-75
Identity = 159/327 (48.62%), Postives = 184/327 (56.27%), Query Frame = 1 

Query: 24  REGSLANFDALWQMNLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRE 83
           R GS   F+      L        G YP R G+P+C Y                      
Sbjct: 56  RFGSTCRFNHPRDRELVIATARMRGEYPERIGQPECEY---------------------- 115

Query: 84  LYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNIIGYPLRPSEPECAYYIRTGQCKFGNT 143
             YLKTGTCKFG TCKFHHPR+KAGIAGRV+LN++GYPLR +E +CAY++RTG CKFG T
Sbjct: 116 --YLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFLRTGHCKFGGT 175

Query: 144 CKFHH--PQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPSPRWEGPSSY 203
           CKF+H  PQPTNMMV             PT GQQSYP     WSRASFI SPRW+ PSSY
Sbjct: 176 CKFNHPQPQPTNMMV-------------PTSGQQSYP-----WSRASFIASPRWQDPSSY 235

Query: 204 ASLILPQGVLSVPGWNAFNDQLGSVSSS-----------------ESPQQTRENVFPERP 263
           ASLI+PQGV+ V GWN ++ QLGSVS S                 ES  Q++ +     P
Sbjct: 236 ASLIMPQGVVPVQGWNPYSGQLGSVSPSGTGNDQNYRNLQQNETIESGSQSQGSFSGYNP 295

Query: 264 GQ----------------PEC------QFYMKTGDCKFGAVCRFHHPRERVLPAPDCVLS 307
           G                 PE       QFYMKTGDCKFG VC+FHHPR+R  P PDC+LS
Sbjct: 296 GSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLS 339

[Close]
BLAST of Cp4.1LG18g02510 vs. Swiss-Prot
Match: C3H57_ARATH (Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis thaliana GN=ZFN3 PE=2 SV=2)

HSP 1 Score: 277.3 bits (708), Expect = 2.0e-73
Identity = 148/290 (51.03%), Postives = 181/290 (62.41%), Query Frame = 1 

Query: 24  REGSLANFDALWQMNLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRE 83
           R GS   F+      L        G YP R G+P+C +                      
Sbjct: 58  RFGSTCRFNHPHDRKLVIATARIKGEYPERIGQPECEF---------------------- 117

Query: 84  LYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNIIGYPLRPSEPECAYYIRTGQCKFGNT 143
             YLKTGTCKFG TCKFHHPR+KAGI G V++N++ YPLRP+E +C+Y++R GQCKFG T
Sbjct: 118 --YLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGT 177

Query: 144 CKFHHP--QPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPS-PRWEGPSS 203
           CKF+HP  Q TN+MVS+RGSP+Y  +QS T GQ SY     +WSR SF+ + PR + PS 
Sbjct: 178 CKFNHPQTQSTNLMVSVRGSPVYSALQSLT-GQPSY-----SWSRTSFVANPPRLQDPSG 237

Query: 204 YASLILPQGVLSVPGWNAFND-QLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCK 263
           +AS    QG L   G+++ N   LG  +        RENVFPERPGQPECQFYMKTGDCK
Sbjct: 238 FAS--GSQGGLFSSGFHSGNSVPLGFYA------LPRENVFPERPGQPECQFYMKTGDCK 297

Query: 264 FGAVCRFHHPRERVLPAPDCVLSPIGLPLRPEGKKM---YRREGSCKVDP 307
           FG VC+FHHPR+R  P PDCVLS +GLPLRP G+ +   Y R G CK  P
Sbjct: 298 FGTVCKFHHPRDRQTPPPDCVLSSVGLPLRP-GEPLCVFYSRYGICKFGP 308

[Close]
BLAST of Cp4.1LG18g02510 vs. TrEMBL
Match: W9SVH0_9ROSA (Zinc finger CCCH domain-containing protein ZFN-like protein OS=Morus notabilis GN=L484_015122 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 1.4e-129
Identity = 233/350 (66.57%), Postives = 263/350 (75.14%), Query Frame = 1 

Query: 1   MEYDSGIPMSVTEGHSSALTPSLREGSLA-NFDALWQMNLGSGEIMGSGSYPVRPGEPDC 60
           ME+D+GIPMS+      A    LRE S + + DA+WQMNL S E M SG+YP RPGEPDC
Sbjct: 1   MEFDAGIPMSL------AAVTELRELSPSFSQDAIWQMNLRSSETMESGTYPERPGEPDC 60

Query: 61  SYYIRTGLCRFGATCRFNHPPNRELYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNIIG 120
           SYYIRTGLCRFGATCRFNHPPNR+LYYLKTGTCKFGATCKFHHPRDKAGIAGRV+LNI+G
Sbjct: 61  SYYIRTGLCRFGATCRFNHPPNRKLYYLKTGTCKFGATCKFHHPRDKAGIAGRVSLNILG 120

Query: 121 YPLRPSEPECAYYIRTGQCKFGNTCKFHHPQPTNMMVSLRGSPIYPTVQSP-TPGQQSYP 180
           YPLRP+E ECAYY+RTGQCKFG+TCKFHHPQPTNMMVS+RGSP+YPTVQSP TPGQQSY 
Sbjct: 121 YPLRPNEMECAYYLRTGQCKFGSTCKFHHPQPTNMMVSMRGSPVYPTVQSPTTPGQQSYI 180

Query: 181 GGSTNWSRASFIPSPRWEGPSSYASLILPQGVLSVPGWNAFNDQLGSVSSSESPQQ---- 240
           GG TNWSRASFIPSPRW+G SSYA +ILPQGV+SVPGWN ++ QLGSVSS E  Q     
Sbjct: 181 GGITNWSRASFIPSPRWQGSSSYAPMILPQGVVSVPGWNTYSGQLGSVSSPERQQPSGSS 240

Query: 241 ---------------TRENVFPERPGQ--------------PEC------QFYMKTGDCK 300
                          ++  + P R G               PE       QFYMKTGDCK
Sbjct: 241 QIYGTSRQSDPANTGSQGTLSPYRSGSIPVGFYALQRENVFPERTGQPECQFYMKTGDCK 300

Query: 301 FGAVCRFHHPRERVLPAPDCVLSPIGLPLRPEGKKM---YRREGSCKVDP 307
           FGAVC+FHHPRER++PAPDC+LSP+GLPLRP G+ +   Y R G CK  P
Sbjct: 301 FGAVCKFHHPRERLIPAPDCLLSPMGLPLRP-GEPLCIFYSRYGICKFGP 343

[Close]
BLAST of Cp4.1LG18g02510 vs. TrEMBL
Match: A0A103YF21_CYNCS (Zinc finger, CCCH-type OS=Cynara cardunculus var. scolymus GN=Ccrd_013709 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 9.2e-126
Identity = 218/305 (71.48%), Postives = 239/305 (78.36%), Query Frame = 1 

Query: 43  EIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELYYLKTGTCKFGATCKFHH 102
           E M  G YPVR GEPDCSYYIRTGLCRFGATCRFNHPPNR+LYYLKTGTCKFGATCKFHH
Sbjct: 21  EEMDPGPYPVREGEPDCSYYIRTGLCRFGATCRFNHPPNRKLYYLKTGTCKFGATCKFHH 80

Query: 103 PRDKAGIAGRVALNIIGYPLRPSEPECAYYIRTGQCKFGNTCKFHHPQPTNMMVSLRGSP 162
           PRDKAGIAGRV+LN++GYPLR +E ECAYY+RTGQCKFG+TCKFHHPQP+NMMVS RGSP
Sbjct: 81  PRDKAGIAGRVSLNVLGYPLRTNEAECAYYLRTGQCKFGSTCKFHHPQPSNMMVSYRGSP 140

Query: 163 IYPTVQSPT-PGQQSYPGGSTNWS--RASFIPSPRWEGPSSYASLILPQGVLSVPGWNAF 222
           +YPTVQSPT PGQQSYPGG TNWS  RASFI SPRW+ PS+YA +ILPQGV+SVPGW A+
Sbjct: 141 VYPTVQSPTSPGQQSYPGGITNWSLSRASFI-SPRWQAPSNYAPVILPQGVVSVPGWGAY 200

Query: 223 NDQLGSVSSSESPQQTR-----------------------------------ENVFPERP 282
           +  LGS+SSSES QQT                                    ENVFPERP
Sbjct: 201 SGPLGSLSSSESQQQTAGNSQIYGTSRQSEAANEAVQGTYSSYRTGYYALPSENVFPERP 260

Query: 283 GQPECQFYMKTGDCKFGAVCRFHHPRERVLPAPDCVLSPIGLPLRPEGKKM---YRREGS 307
           GQPECQFYMKTGDCKFGAVCRFHHPRER++P PDCVLSP+GLPLRP G+ +   Y R G 
Sbjct: 261 GQPECQFYMKTGDCKFGAVCRFHHPRERMIPVPDCVLSPMGLPLRP-GEPLCIFYSRYGI 320

[Close]
BLAST of Cp4.1LG18g02510 vs. TrEMBL
Match: E5GBK3_CUCME (Nucleic acid binding protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 1.2e-125
Identity = 219/286 (76.57%), Postives = 229/286 (80.07%), Query Frame = 1 

Query: 24  REGSLANFDALWQMNLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRE 83
           R G+   F+      L        G +P R G+P+C Y                      
Sbjct: 33  RFGATCRFNHPPNRELAIATARMKGEFPERIGQPECQY---------------------- 92

Query: 84  LYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNIIGYPLRPSEPECAYYIRTGQCKFGNT 143
             YLKTGTCKFGATCKFHHPRDKAGIAGRVALNI+GYPLRPSE ECAYY+RTGQCKFGNT
Sbjct: 93  --YLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPSETECAYYLRTGQCKFGNT 152

Query: 144 CKFHHPQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPSPRWEGPSSYAS 203
           CKFHHPQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPSPRW+GPSSYAS
Sbjct: 153 CKFHHPQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPSPRWQGPSSYAS 212

Query: 204 LILPQGVLSVPGWNAFNDQLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCKFGAV 263
           LILPQGVLSVPGWNAFNDQLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCKFGAV
Sbjct: 213 LILPQGVLSVPGWNAFNDQLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCKFGAV 272

Query: 264 CRFHHPRERVLPAPDCVLSPIGLPLRPEGKKM---YRREGSCKVDP 307
           CRFHHPRERVLPAPDCVLSPIGLPLRP G+ +   Y R G CK  P
Sbjct: 273 CRFHHPRERVLPAPDCVLSPIGLPLRP-GEPLCIFYSRYGICKFGP 293

[Close]
BLAST of Cp4.1LG18g02510 vs. TrEMBL
Match: A0A0A0M053_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G659020 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 1.2e-125
Identity = 219/286 (76.57%), Postives = 229/286 (80.07%), Query Frame = 1 

Query: 24  REGSLANFDALWQMNLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRE 83
           R G+   F+      L        G +P R G+P+C Y                      
Sbjct: 33  RFGATCRFNHPPNRELAIATARMKGEFPERIGQPECQY---------------------- 92

Query: 84  LYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNIIGYPLRPSEPECAYYIRTGQCKFGNT 143
             YLKTGTCKFGATCKFHHPRDKAGIAGRVALNI+GYPLRPSE ECAYY+RTGQCKFGNT
Sbjct: 93  --YLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPSETECAYYLRTGQCKFGNT 152

Query: 144 CKFHHPQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPSPRWEGPSSYAS 203
           CKFHHPQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPSPRW+GPSSYAS
Sbjct: 153 CKFHHPQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPSPRWQGPSSYAS 212

Query: 204 LILPQGVLSVPGWNAFNDQLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCKFGAV 263
           LILPQGVLSVPGWNAFNDQLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCKFGAV
Sbjct: 213 LILPQGVLSVPGWNAFNDQLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCKFGAV 272

Query: 264 CRFHHPRERVLPAPDCVLSPIGLPLRPEGKKM---YRREGSCKVDP 307
           CRFHHPRERVLPAPDCVLSPIGLPLRP G+ +   Y R G CK  P
Sbjct: 273 CRFHHPRERVLPAPDCVLSPIGLPLRP-GEPLCIFYSRYGICKFGP 293

[Close]
BLAST of Cp4.1LG18g02510 vs. TrEMBL
Match: A0A0B0NLU7_GOSAR (Zinc finger CCCH domain-containing protein ZFN-like protein OS=Gossypium arboreum GN=F383_03232 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 3.6e-106
Identity = 194/307 (63.19%), Postives = 221/307 (71.99%), Query Frame = 1 

Query: 24  REGSLANFDALWQMNLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRE 83
           R G+  +F+      L        G +P R G+P+C        C + +           
Sbjct: 71  RFGATCHFNHPPNRKLAIAAARMKGEFPERVGQPECQ------ACTYSS----------- 130

Query: 84  LYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNIIGYPLRPSEPECAYYIRTGQCKFGNT 143
            YYLKTGTCKFGATCKFHHPRDKAGIAGRV+LNI+GYPLRP+E ECAYY+RTGQCKFG+T
Sbjct: 131 -YYLKTGTCKFGATCKFHHPRDKAGIAGRVSLNILGYPLRPNETECAYYLRTGQCKFGST 190

Query: 144 CKFHHPQPTNMMVSLRGSPIYPTVQSP-TPGQQSYPGGSTNWSRASFIPSPRWEGPSSYA 203
           CKFHHPQPTNMMVSLRGSPIY TV SP TPGQQS+PGG TNWSRASFIPSPRW+GPSSYA
Sbjct: 191 CKFHHPQPTNMMVSLRGSPIYQTVPSPATPGQQSHPGGITNWSRASFIPSPRWQGPSSYA 250

Query: 204 SLILPQGVLSVPGWNAFN-------DQLGSVSSSESPQQTR-------------ENVFPE 263
           SLILPQG++SVPGWNA++       ++  +  S  S  + R             ENVFPE
Sbjct: 251 SLILPQGMVSVPGWNAYSIHGTSRQNESATAGSQASFSELRSGSVPVGVYALQRENVFPE 310

Query: 264 RPGQPECQFYMKTGDCKFGAVCRFHHPRERVLPAPDCVLSPIGLPLRPEGKKM---YRRE 307
           RPG+PECQFYMKTGDCKFGAVC+FHHPRERVLPAPDCVLSPIGLPLRP G+ +   Y R 
Sbjct: 311 RPGEPECQFYMKTGDCKFGAVCKFHHPRERVLPAPDCVLSPIGLPLRP-GEPLCIFYSRY 358

[Close]
BLAST of Cp4.1LG18g02510 vs. TAIR10
Match: AT3G02830.1 (AT3G02830.1 zinc finger protein 1)

HSP 1 Score: 283.5 bits (724), Expect = 1.6e-76
Identity = 159/327 (48.62%), Postives = 184/327 (56.27%), Query Frame = 1 

Query: 24  REGSLANFDALWQMNLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRE 83
           R GS   F+      L        G YP R G+P+C Y                      
Sbjct: 56  RFGSTCRFNHPRDRELVIATARMRGEYPERIGQPECEY---------------------- 115

Query: 84  LYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNIIGYPLRPSEPECAYYIRTGQCKFGNT 143
             YLKTGTCKFG TCKFHHPR+KAGIAGRV+LN++GYPLR +E +CAY++RTG CKFG T
Sbjct: 116 --YLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFLRTGHCKFGGT 175

Query: 144 CKFHH--PQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPSPRWEGPSSY 203
           CKF+H  PQPTNMMV             PT GQQSYP     WSRASFI SPRW+ PSSY
Sbjct: 176 CKFNHPQPQPTNMMV-------------PTSGQQSYP-----WSRASFIASPRWQDPSSY 235

Query: 204 ASLILPQGVLSVPGWNAFNDQLGSVSSS-----------------ESPQQTRENVFPERP 263
           ASLI+PQGV+ V GWN ++ QLGSVS S                 ES  Q++ +     P
Sbjct: 236 ASLIMPQGVVPVQGWNPYSGQLGSVSPSGTGNDQNYRNLQQNETIESGSQSQGSFSGYNP 295

Query: 264 GQ----------------PEC------QFYMKTGDCKFGAVCRFHHPRERVLPAPDCVLS 307
           G                 PE       QFYMKTGDCKFG VC+FHHPR+R  P PDC+LS
Sbjct: 296 GSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLS 339

[Close]
BLAST of Cp4.1LG18g02510 vs. TAIR10
Match: AT5G16540.1 (AT5G16540.1 zinc finger nuclease 3)

HSP 1 Score: 277.3 bits (708), Expect = 1.1e-74
Identity = 148/290 (51.03%), Postives = 181/290 (62.41%), Query Frame = 1 

Query: 24  REGSLANFDALWQMNLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRE 83
           R GS   F+      L        G YP R G+P+C +                      
Sbjct: 58  RFGSTCRFNHPHDRKLVIATARIKGEYPERIGQPECEF---------------------- 117

Query: 84  LYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNIIGYPLRPSEPECAYYIRTGQCKFGNT 143
             YLKTGTCKFG TCKFHHPR+KAGI G V++N++ YPLRP+E +C+Y++R GQCKFG T
Sbjct: 118 --YLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGT 177

Query: 144 CKFHHP--QPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPS-PRWEGPSS 203
           CKF+HP  Q TN+MVS+RGSP+Y  +QS T GQ SY     +WSR SF+ + PR + PS 
Sbjct: 178 CKFNHPQTQSTNLMVSVRGSPVYSALQSLT-GQPSY-----SWSRTSFVANPPRLQDPSG 237

Query: 204 YASLILPQGVLSVPGWNAFND-QLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCK 263
           +AS    QG L   G+++ N   LG  +        RENVFPERPGQPECQFYMKTGDCK
Sbjct: 238 FAS--GSQGGLFSSGFHSGNSVPLGFYA------LPRENVFPERPGQPECQFYMKTGDCK 297

Query: 264 FGAVCRFHHPRERVLPAPDCVLSPIGLPLRPEGKKM---YRREGSCKVDP 307
           FG VC+FHHPR+R  P PDCVLS +GLPLRP G+ +   Y R G CK  P
Sbjct: 298 FGTVCKFHHPRDRQTPPPDCVLSSVGLPLRP-GEPLCVFYSRYGICKFGP 308

[Close]
BLAST of Cp4.1LG18g02510 vs. TAIR10
Match: AT2G47850.1 (AT2G47850.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 236.9 bits (603), Expect = 1.7e-62
Identity = 124/298 (41.61%), Postives = 160/298 (53.69%), Query Frame = 1 

Query: 44  IMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELYYLKTGTCKFGATCKFHHP 103
           +  +G YP R GEP C +                        YLKTGTCKFGA+CKFHHP
Sbjct: 81  VRATGQYPERFGEPPCQF------------------------YLKTGTCKFGASCKFHHP 140

Query: 104 RDKAGIAGRVALNIIGYPLRPSEPECAYYIRTGQCKFGNTCKFHHPQPTNMMV---SLRG 163
           ++  G    V LNI GYP+R  + EC+YY++TGQCKFG TCKFHHPQP    V       
Sbjct: 141 KNAGGSMSHVPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQPAGTTVPPPPASA 200

Query: 164 SPIYPTVQSPTPGQQSYPGGSTNWSRASFIPSPRWEGPSSYASLILPQGVLSVPGWNAFN 223
              YP+VQS  P Q   P  S   +R + +P    +G  +Y  ++L  GV+ +PGW+ ++
Sbjct: 201 PQFYPSVQSLMPDQYGGPSSSLRVAR-TLLPGSYMQG--AYGPMLLTPGVVPIPGWSPYS 260

Query: 224 -----------------------DQLGSVS----------SSESPQQTRENVFPERPGQP 283
                                   QL S +          SS +    +E  FPERPG+P
Sbjct: 261 APVSPALSPGAQHAVGATSLYGVTQLTSTTPSLPGVYPSLSSPTGVIQKEQAFPERPGEP 320

Query: 284 ECQFYMKTGDCKFGAVCRFHHPRERVLPAPDCVLSPIGLPLRPEGKK--MYRREGSCK 304
           ECQ+Y+KTGDCKFG  C+FHHPR+RV P  +CVLSPIGLPLRP  ++   Y + G CK
Sbjct: 321 ECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCK 351

[Close]
BLAST of Cp4.1LG18g02510 vs. TAIR10
Match: AT2G32930.2 (AT2G32930.2 zinc finger nuclease 2)

HSP 1 Score: 194.5 bits (493), Expect = 9.6e-50
Identity = 117/314 (37.26%), Postives = 161/314 (51.27%), Query Frame = 1 

Query: 9   MSVTEGHSSALTPSLREGSLANFDALWQMNLGSGEIMGSGSYPVRPGEPDCSYYIRTGLC 68
           MS T+      T S+R       D   +M +    +  S  YP RPGE DC +++RTG C
Sbjct: 1   MSETQQQVQNSTGSIRSPDKIE-DTFRRMKVNEDNMEQSSPYPDRPGERDCQFFLRTGQC 60

Query: 69  RFGATCRFNHP----PNRELYY------------LKTGTCKFGATCKFHHPRDKAGIAGR 128
            +G +CR+NHP    P   +YY             +TG CK+G TCK+HHP+D+ G AG 
Sbjct: 61  GYGNSCRYNHPLTNLPQGIIYYRDQLPERVGQPDCETGACKYGPTCKYHHPKDRNG-AGP 120

Query: 129 VALNIIGYPLRPSEPECAYYIRTGQCKFGNTCKFHHPQPTNMMVSLRGSPIYPTVQSPTP 188
           V  N++G P+R  E  C YY++TG C+FG  CKFHHP P +      G   Y     P+ 
Sbjct: 121 VLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHHPHPHSQ--PSNGHSAYAMSSFPSV 180

Query: 189 GQQSYPGGSTNWS--RASFIPSPRWEGPSSYA---SLILP-QGVLSVPGWNAF------- 248
           G   Y  G T  S   A++   PR + P S A    ++ P QG+L   GW  +       
Sbjct: 181 G-FPYASGMTMVSLPPATYGAIPRPQVPQSQAYMPYMVAPSQGLLPPQGWATYMTASNPI 240

Query: 249 ---NDQLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERVLPA 291
                QL S SSS S   T  +       + EC+F+M TG CK+G  C++ HP+ER+L +
Sbjct: 241 YNMKTQLDS-SSSASVAVTVTSHHHSFSERAECRFFMNTGTCKYGDDCKYSHPKERLLQS 300

[Close]
BLAST of Cp4.1LG18g02510 vs. TAIR10
Match: AT3G48440.1 (AT3G48440.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 194.1 bits (492), Expect = 1.3e-49
Identity = 120/326 (36.81%), Postives = 157/326 (48.16%), Query Frame = 1 

Query: 40  GSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNREL--------------- 99
           G  E      YPVRPG  DCS+Y+RTG C+FG++C+FNHP  R+                
Sbjct: 97  GWSENESENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDG 156

Query: 100 ---------YYLKTGTCKFGATCKFHHPRDKAGIAGRVALNIIGYPLRPSEPECAYYIRT 159
                    YY +TG CK+G TC+F+H   K+G+A    LN +G PLRP E EC YY+R 
Sbjct: 157 GKLGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRN 216

Query: 160 GQCKFGNTCKFHHPQPTNMMVSLRGSPIYPTVQSPTPG----QQSYPGGSTNWSRASFIP 219
           G CK+G  CKF+HP PT   +    SP +      + G    + ++   ST+WS      
Sbjct: 217 GSCKYGAECKFNHPDPTT--IGGTDSPSFRGNNGVSIGTFSPKATFQASSTSWS------ 276

Query: 220 SPRW-EGPSSYASLILPQ--GVLSV-PGWNAFNDQLGSVSSSE--------------SPQ 279
           SPR   G S +  ++L Q  GV S  P WN +     SV SSE              S  
Sbjct: 277 SPRHVNGTSPFIPVMLSQTHGVTSQNPEWNGYQ---ASVYSSERGVFSPSTTYLMNNSSA 336

Query: 280 QTRENVFPERPGQPECQF-----------YMKTGDCKFGAVCRFHHPRERVLPAPDCVLS 307
           +T   +   R   P  +F           YMKTGDCKF   C++HHP+ R+   P   L+
Sbjct: 337 ETSMLLSQYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALN 396

[Close]
BLAST of Cp4.1LG18g02510 vs. NCBI nr
Match: gi|1009118042|ref|XP_015875646.1| (PREDICTED: zinc finger CCCH domain-containing protein ZFN-like isoform X2 [Ziziphus jujuba])

HSP 1 Score: 475.3 bits (1222), Expect = 8.0e-131
Identity = 236/351 (67.24%), Postives = 258/351 (73.50%), Query Frame = 1 

Query: 1   MEYDSGIPMS---VTEGHSSALTPSLREGSLANFDALWQMNLGSGEIMGSGSYPVRPGEP 60
           ME+D+GIPMS   VTE  S  L+PSL +      DA+WQMNL S E M SG YP RPGEP
Sbjct: 1   MEFDAGIPMSLAAVTEAPS--LSPSLSQ------DAMWQMNLRSSETMDSGPYPERPGEP 60

Query: 61  DCSYYIRTGLCRFGATCRFNHPPNRELYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNI 120
           DCSYYIRTGLCRFGATCRFNHPPNR+LYYLKTGTCKFGATCKFHHPRDKAGIAGRV+LN 
Sbjct: 61  DCSYYIRTGLCRFGATCRFNHPPNRKLYYLKTGTCKFGATCKFHHPRDKAGIAGRVSLNT 120

Query: 121 IGYPLRPSEPECAYYIRTGQCKFGNTCKFHHPQPTNMMVSLRGSPIYPTVQSPT-PGQQS 180
            GYPLRP+E ECAYY+RTGQCKFG+TCKFHHPQP NMMVS+RGSP+Y TV SPT PGQQS
Sbjct: 121 SGYPLRPNETECAYYLRTGQCKFGSTCKFHHPQPNNMMVSMRGSPVYTTVPSPTAPGQQS 180

Query: 181 YPGGSTNWSRASFIPSPRWEGPSSYASLILPQGVLSVPGWNAFNDQLGSVSSSESPQQTR 240
           YPGG TNWSRASFIPSPRW+GPSSY  LILPQGV+SVPGWNA++ QLGSVSSSE+ Q   
Sbjct: 181 YPGGITNWSRASFIPSPRWQGPSSYPPLILPQGVVSVPGWNAYSGQLGSVSSSENQQIAG 240

Query: 241 ENVFPERPGQPEC--------------------------------------QFYMKTGDC 300
            +     P Q E                                       QFYMKTGDC
Sbjct: 241 NSPIYGTPRQSEQNAASQGTFSQYRSSSVPVGFYALQRENVFPERPGQPECQFYMKTGDC 300

Query: 301 KFGAVCRFHHPRERVLPAPDCVLSPIGLPLRPEGKKM---YRREGSCKVDP 307
           KFGAVCRFHHPRER++P PDCVLSPIGLPLRP G+ +   Y R G CK  P
Sbjct: 301 KFGAVCRFHHPRERLIPVPDCVLSPIGLPLRP-GEPLCIFYYRYGICKFGP 342

[Close]
BLAST of Cp4.1LG18g02510 vs. NCBI nr
Match: gi|703154918|ref|XP_010111067.1| (Zinc finger CCCH domain-containing protein ZFN-like protein [Morus notabilis])

HSP 1 Score: 470.7 bits (1210), Expect = 2.0e-129
Identity = 233/350 (66.57%), Postives = 263/350 (75.14%), Query Frame = 1 

Query: 1   MEYDSGIPMSVTEGHSSALTPSLREGSLA-NFDALWQMNLGSGEIMGSGSYPVRPGEPDC 60
           ME+D+GIPMS+      A    LRE S + + DA+WQMNL S E M SG+YP RPGEPDC
Sbjct: 1   MEFDAGIPMSL------AAVTELRELSPSFSQDAIWQMNLRSSETMESGTYPERPGEPDC 60

Query: 61  SYYIRTGLCRFGATCRFNHPPNRELYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNIIG 120
           SYYIRTGLCRFGATCRFNHPPNR+LYYLKTGTCKFGATCKFHHPRDKAGIAGRV+LNI+G
Sbjct: 61  SYYIRTGLCRFGATCRFNHPPNRKLYYLKTGTCKFGATCKFHHPRDKAGIAGRVSLNILG 120

Query: 121 YPLRPSEPECAYYIRTGQCKFGNTCKFHHPQPTNMMVSLRGSPIYPTVQSP-TPGQQSYP 180
           YPLRP+E ECAYY+RTGQCKFG+TCKFHHPQPTNMMVS+RGSP+YPTVQSP TPGQQSY 
Sbjct: 121 YPLRPNEMECAYYLRTGQCKFGSTCKFHHPQPTNMMVSMRGSPVYPTVQSPTTPGQQSYI 180

Query: 181 GGSTNWSRASFIPSPRWEGPSSYASLILPQGVLSVPGWNAFNDQLGSVSSSESPQQ---- 240
           GG TNWSRASFIPSPRW+G SSYA +ILPQGV+SVPGWN ++ QLGSVSS E  Q     
Sbjct: 181 GGITNWSRASFIPSPRWQGSSSYAPMILPQGVVSVPGWNTYSGQLGSVSSPERQQPSGSS 240

Query: 241 ---------------TRENVFPERPGQ--------------PEC------QFYMKTGDCK 300
                          ++  + P R G               PE       QFYMKTGDCK
Sbjct: 241 QIYGTSRQSDPANTGSQGTLSPYRSGSIPVGFYALQRENVFPERTGQPECQFYMKTGDCK 300

Query: 301 FGAVCRFHHPRERVLPAPDCVLSPIGLPLRPEGKKM---YRREGSCKVDP 307
           FGAVC+FHHPRER++PAPDC+LSP+GLPLRP G+ +   Y R G CK  P
Sbjct: 301 FGAVCKFHHPRERLIPAPDCLLSPMGLPLRP-GEPLCIFYSRYGICKFGP 343

[Close]
BLAST of Cp4.1LG18g02510 vs. NCBI nr
Match: gi|976923608|gb|KVI07912.1| (Zinc finger, CCCH-type [Cynara cardunculus var. scolymus])

HSP 1 Score: 458.0 bits (1177), Expect = 1.3e-125
Identity = 218/305 (71.48%), Postives = 239/305 (78.36%), Query Frame = 1 

Query: 43  EIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELYYLKTGTCKFGATCKFHH 102
           E M  G YPVR GEPDCSYYIRTGLCRFGATCRFNHPPNR+LYYLKTGTCKFGATCKFHH
Sbjct: 21  EEMDPGPYPVREGEPDCSYYIRTGLCRFGATCRFNHPPNRKLYYLKTGTCKFGATCKFHH 80

Query: 103 PRDKAGIAGRVALNIIGYPLRPSEPECAYYIRTGQCKFGNTCKFHHPQPTNMMVSLRGSP 162
           PRDKAGIAGRV+LN++GYPLR +E ECAYY+RTGQCKFG+TCKFHHPQP+NMMVS RGSP
Sbjct: 81  PRDKAGIAGRVSLNVLGYPLRTNEAECAYYLRTGQCKFGSTCKFHHPQPSNMMVSYRGSP 140

Query: 163 IYPTVQSPT-PGQQSYPGGSTNWS--RASFIPSPRWEGPSSYASLILPQGVLSVPGWNAF 222
           +YPTVQSPT PGQQSYPGG TNWS  RASFI SPRW+ PS+YA +ILPQGV+SVPGW A+
Sbjct: 141 VYPTVQSPTSPGQQSYPGGITNWSLSRASFI-SPRWQAPSNYAPVILPQGVVSVPGWGAY 200

Query: 223 NDQLGSVSSSESPQQTR-----------------------------------ENVFPERP 282
           +  LGS+SSSES QQT                                    ENVFPERP
Sbjct: 201 SGPLGSLSSSESQQQTAGNSQIYGTSRQSEAANEAVQGTYSSYRTGYYALPSENVFPERP 260

Query: 283 GQPECQFYMKTGDCKFGAVCRFHHPRERVLPAPDCVLSPIGLPLRPEGKKM---YRREGS 307
           GQPECQFYMKTGDCKFGAVCRFHHPRER++P PDCVLSP+GLPLRP G+ +   Y R G 
Sbjct: 261 GQPECQFYMKTGDCKFGAVCRFHHPRERMIPVPDCVLSPMGLPLRP-GEPLCIFYSRYGI 320

[Close]
BLAST of Cp4.1LG18g02510 vs. NCBI nr
Match: gi|700211583|gb|KGN66679.1| (hypothetical protein Csa_1G659020 [Cucumis sativus])

HSP 1 Score: 457.6 bits (1176), Expect = 1.7e-125
Identity = 219/286 (76.57%), Postives = 229/286 (80.07%), Query Frame = 1 

Query: 24  REGSLANFDALWQMNLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRE 83
           R G+   F+      L        G +P R G+P+C Y                      
Sbjct: 33  RFGATCRFNHPPNRELAIATARMKGEFPERIGQPECQY---------------------- 92

Query: 84  LYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNIIGYPLRPSEPECAYYIRTGQCKFGNT 143
             YLKTGTCKFGATCKFHHPRDKAGIAGRVALNI+GYPLRPSE ECAYY+RTGQCKFGNT
Sbjct: 93  --YLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPSETECAYYLRTGQCKFGNT 152

Query: 144 CKFHHPQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPSPRWEGPSSYAS 203
           CKFHHPQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPSPRW+GPSSYAS
Sbjct: 153 CKFHHPQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPSPRWQGPSSYAS 212

Query: 204 LILPQGVLSVPGWNAFNDQLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCKFGAV 263
           LILPQGVLSVPGWNAFNDQLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCKFGAV
Sbjct: 213 LILPQGVLSVPGWNAFNDQLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCKFGAV 272

Query: 264 CRFHHPRERVLPAPDCVLSPIGLPLRPEGKKM---YRREGSCKVDP 307
           CRFHHPRERVLPAPDCVLSPIGLPLRP G+ +   Y R G CK  P
Sbjct: 273 CRFHHPRERVLPAPDCVLSPIGLPLRP-GEPLCIFYSRYGICKFGP 293

[Close]
BLAST of Cp4.1LG18g02510 vs. NCBI nr
Match: gi|307135987|gb|ADN33845.1| (nucleic acid binding protein [Cucumis melo subsp. melo])

HSP 1 Score: 457.6 bits (1176), Expect = 1.7e-125
Identity = 219/286 (76.57%), Postives = 229/286 (80.07%), Query Frame = 1 

Query: 24  REGSLANFDALWQMNLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRE 83
           R G+   F+      L        G +P R G+P+C Y                      
Sbjct: 33  RFGATCRFNHPPNRELAIATARMKGEFPERIGQPECQY---------------------- 92

Query: 84  LYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNIIGYPLRPSEPECAYYIRTGQCKFGNT 143
             YLKTGTCKFGATCKFHHPRDKAGIAGRVALNI+GYPLRPSE ECAYY+RTGQCKFGNT
Sbjct: 93  --YLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPSETECAYYLRTGQCKFGNT 152

Query: 144 CKFHHPQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPSPRWEGPSSYAS 203
           CKFHHPQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPSPRW+GPSSYAS
Sbjct: 153 CKFHHPQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPSPRWQGPSSYAS 212

Query: 204 LILPQGVLSVPGWNAFNDQLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCKFGAV 263
           LILPQGVLSVPGWNAFNDQLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCKFGAV
Sbjct: 213 LILPQGVLSVPGWNAFNDQLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCKFGAV 272

Query: 264 CRFHHPRERVLPAPDCVLSPIGLPLRPEGKKM---YRREGSCKVDP 307
           CRFHHPRERVLPAPDCVLSPIGLPLRP G+ +   Y R G CK  P
Sbjct: 273 CRFHHPRERVLPAPDCVLSPIGLPLRP-GEPLCIFYSRYGICKFGP 293

The following BLAST results are available for this feature:
BLAST of Cp4.1LG18g02510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZFNL_PEA5.1e-9353.82Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum sativum PE=2 SV=1[more]
C3H63_ORYSJ4.6e-7849.17Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa subsp. japonica GN... [more]
C3H66_ORYSJ1.1e-7647.56Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica GN... [more]
C3H33_ARATH2.8e-7548.62Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis thaliana GN=ZFN1 PE... [more]
C3H57_ARATH2.0e-7351.03Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis thaliana GN=ZFN3 PE... [more]
BLAST of Cp4.1LG18g02510 vs. TrEMBL
Match NameE-valueIdentityDescription
W9SVH0_9ROSA1.4e-12966.57Zinc finger CCCH domain-containing protein ZFN-like protein OS=Morus notabilis G... [more]
A0A103YF21_CYNCS9.2e-12671.48Zinc finger, CCCH-type OS=Cynara cardunculus var. scolymus GN=Ccrd_013709 PE=4 S... [more]
E5GBK3_CUCME1.2e-12576.57Nucleic acid binding protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0M053_CUCSA1.2e-12576.57Uncharacterized protein OS=Cucumis sativus GN=Csa_1G659020 PE=4 SV=1[more]
A0A0B0NLU7_GOSAR3.6e-10663.19Zinc finger CCCH domain-containing protein ZFN-like protein OS=Gossypium arboreu... [more]
BLAST of Cp4.1LG18g02510 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G02830.11.6e-7648.62 zinc finger protein 1[more]
AT5G16540.11.1e-7451.03 zinc finger nuclease 3[more]
AT2G47850.11.7e-6241.61 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT2G32930.29.6e-5037.26 zinc finger nuclease 2[more]
AT3G48440.11.3e-4936.81 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
BLAST of Cp4.1LG18g02510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1009118042|ref|XP_015875646.1|8.0e-13167.24PREDICTED: zinc finger CCCH domain-containing protein ZFN-like isoform X2 [Zizip... [more]
gi|703154918|ref|XP_010111067.1|2.0e-12966.57Zinc finger CCCH domain-containing protein ZFN-like protein [Morus notabilis][more]
gi|976923608|gb|KVI07912.1|1.3e-12571.48Zinc finger, CCCH-type [Cynara cardunculus var. scolymus][more]
gi|700211583|gb|KGN66679.1|1.7e-12576.57hypothetical protein Csa_1G659020 [Cucumis sativus][more]
gi|307135987|gb|ADN33845.1|1.7e-12576.57nucleic acid binding protein [Cucumis melo subsp. melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG18g02510.1Cp4.1LG18g02510.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeGENE3DG3DSA:4.10.1000.10coord: 59..79
score: 5.4E-4coord: 85..104
score: 2.0E-4coord: 249..271
score: 9.2E-5coord: 129..149
score: 3.
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 55..80
score: 3.5E-8coord: 126..150
score: 2.3E-8coord: 245..270
score: 6.1E-9coord: 85..104
score: 4.
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 53..80
score: 2.1E-5coord: 123..150
score: 1.6E-4coord: 82..104
score: 0.1coord: 243..270
score: 7.
IPR000571Zinc finger, CCCH-typePROFILEPS50103ZF_C3H1coord: 243..271
score: 14.596coord: 53..81
score: 14.587coord: 85..105
score: 10.493coord: 123..151
score: 15
IPR000571Zinc finger, CCCH-typeunknownSSF90229CCCH zinc fingercoord: 127..151
score: 2.49E-6coord: 58..81
score: 2.62E-5coord: 247..272
score: 9.6
NoneNo IPR availablePANTHERPTHR12506PROTEIN PHOSPHATASE RELATEDcoord: 32..289
score: 5.5E
NoneNo IPR availablePANTHERPTHR12506:SF25SUBFAMILY NOT NAMEDcoord: 32..289
score: 5.5E