Cp4.1LG18g02500 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG18g02500
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Isopentenyl diphosphate isomerase
Location	Cp4.1LG18 : 4184107 .. 4190823 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTACCAAGTCCGATTTATTTTCTTGACTTTAATATTTCCACATGCATAATATTTAAAACACGTGTGACTTACAACGGAGCTTAATGAATATTAAAAGAATTTTTGGTCTTTTAATAGCAAATATTGTTCGTTTTGGTCCATTACGTCTCCCGTTAGACGAACACGACTCTCCACAATGGTATGATAATAGTAAATATTGTTCGTTTTGGTCCATGACGAATCCCCGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTAAGCATAAGCTCTCGTGTCATTGCTTTGGGCTTCCCCAAAAGGTCTCCTAACAATGGAGATAGTATTCTTTGTTTATAAACCCATTATCATTCCTTAAATTAGTCAGACTTTCATCATCCAACACCTCCCCTTAATCGAGGTTGGACTCCTTTGGAGTCTTAGTCATTTTTTACTGCCTTCGAGAAGGCTCGACTCTTTTTTGTCATTTGTTCGACATTTGAGGATTTACCAATCTATTGTCACGACTAAGTTTAGGGCATGGCTGGTAGGAATAATATTATTATTACCTCACTCTAAATTTTATTTTAATATTTATTTTAATTTATTTTGTTATTTATTTATTTATTTTTCCTCTTCCCCATATGAAGGAACACTCTCGGTCATACTATCGTGTATAACACGCGCGGAAAGTTGCAATAATGGCATCTCTGGAAGCAGATCAAGTGATTTCCACTCAACGCAACAATGGCGGACGCTTCATTTCAATTCTTTAACAATGGCTTTGACCCTTCTTTAAATACTGATTCTTCTCTTTCTTTCTCTTTTCACATCTTCCTCTTCTTGCTTTTCCTTCAGATTCTTCTCTCGCTTCTTCCTTCCAATCCCACCGCTGCTTCGCCATGGCAGATGCCCTTCCTGATGCTGCCATGGACGCCGTCCAGAAGCGCCTCATGTTCGACGACGAGTGCGTCTTCTATTTCTCGTTTTATGTTTTTGTTGTTTGTCTTTTGATTTTTCGTTCCGCTTCTTCTTGTCGCTTTTGACTTTGATTTGTGCGTGGTCATGTTGTCGATTGATTCGTTGATTGATTGGTTTCTGTGTGTTAATGTTGACCTGATTTGGATTCTTTTGTGTTTATTGCTGGAGCATTGGTGTGTTATGGGAAAACGGTGAAGTGTGTATTGATTTGGATGCTTAAGGTTTTTGTGGAACTTCGAGTGTTTGTGGATCAATTATAGGATCTGTTCTCGTTTGAAATCGGATGATCATCATATCCGAAAGTTTAATTGTCCTTTCTCTCTCTTTCTGATGTTATTTTTCAGCTAATTTCACTTTCTTCTTCTTTCTTTACAGTTTTTGTGTAGTTTCGCTTCTTTTGACTGGTTATTTTACGTGATTGTGTTGTTGATTGATCCTATGTTTCTCTCCATTGCTCTGATTTGCTTCATTTGGGGGGAAGAACTAAACTCGAAGCCTGATTTTTGTGTTTATGATTTGCTGAACCAGTTGAATTGGGTCTCAATTGAGGTTCCTGATGAAATAATTTGCAACAATTTGTACAATACCATGTTTGAATTTGGATGACTATCATGTCCCCGACTTTAATGGTCTTCTCACATCCTTGTCTCTCTCTCTCTCTTGCTGATATTATCTTTCATCAATTCATTTCACCTTTTTTACGGGTTTTATGCATTGTTCTTGCTTTTGACTTTGATTTTTACATCATCATATAGTTAATAGATCCCCTCTTTTCTCTACTTTGTCTTATTGACATGTTCTCTGTATTTGAATGGGGAAGGAATCAAATCAAAGCCTCTTTTTCTCCGTCAACGGGGTGAAAATTGTTGATTAGGCATTTCAAACCAGTCGAATTGGGTTTCATTCATTTGAGGTTCCTGCTGATGATTTGATGCTTAAAATTTTCTGGAATGATGAACATCTGTGGCACAATAATAAGGATGGAAAATGATTTGATGCTTAAAATTCCATACCTTTTGATCTGTAAGTAATGATGGAAAATGTTCTTTGTCATGTTAAATCATCACTAAATTCAAAAAGCTGAAATCTGTGATGAATCTAATTCTCTTCTAGTTCAACAACCAGTAAGGTTAAGGGATTCGAATCTCTAAACTATGCTCATGTTGGCGAGTAATCCAACTGTTTAATATATTTCCCGAGCTTCTACGTTTTTGTTTCGGTGAACTCAGGGATTGTTATGTGTCATACCTTAATGCTTGTAACTGGTTCATCATTTTATTCTTCAACATCGTTTTTTTCGCCTCGTTTTTATGTGAATTGTAATGTGTCATCCTTTTTCGTTTCTCTCTCGTGACCCTTTACCTTGGCTTCACTGGATCACTGTGGCTATTACTCTAAAATATCATGTATTCTCATCTGCTCGATGATGTCTTGATCAGAATTCAAGGGAATTGATGGTTTTGTGTGCATATATCAGGCCTTCATTTCTGTTAGAAACCTTTAAAATAAATCATGCTTGCTCAATCATTTTTGGCTCACACGTTCCTCGTATTGGTCTCGAATTCATGGTCAGGTGCATTTTAGTGGACGAGAACGACCGAGTCGTTGGTCATGAATCCAAGTACAACTGTAAGTCAAATCTTATATCCAGTATTGATTTCTTAGAAGCTAGTTTCCTTGTTATTGGCTATAGTTTTGAGCTTGGATAGTGGATTAATGCAGAACAAATATTTGTTCTTCTAACCTGCAGGTCACTTGATGGAAAATATTGAATCTAAGAACTGGCTGCATCGCGCGTTCAGCGTCTTTTTATTCAACTCGAAATATGAATTGCTTCTTCAGGTATGTTATTCGGGTCGGGTTTTGATTTGCACTGCCTGTGCATAGTTTGCTCTATTAAATGATGTCTTTGACAGATTAGAACGTTTGTTTTCATGGCATGGATGGTTTCTTGAGCTTTCTTGTTTCTTGTTAAGTAATACTTTTCAATCAGTTAGTTGAGTATGCTAACTCGTTGGGAGAAATCGATTTCTGTATTCTGATTGCGGAAGCTGTTAACTCACTTGATTCTGTATTACTTCTGAAGCAACGATCTGCGACGAAAGTGACGTTTCCGCTTGTCTGGACGAACACTTGCTGCAGCCATCCATTGTATAGAGAATCTGAACTAATTGAGGAGGATGCTCTTGGTATGTCTGTAACAACACAATCAGAGCTGACCCCTACACGTTTTGAACCTCCTAATATGGATCTTCCTTTTCATGTACAATAACCAGGTGCAAGGAATGCTGCCCAGAGGAAGCTTTTGGATGAACTCGGTATTCCTGCAGAAGACGTCCCAGTCGACCAGTTCACTCCCCTGGGTCGCATGCTATACAAGGCGCCCTCGGATGGCATATGGGGGGAACATGAATGTACTTTCCTTAGCTCATCTGTTTAAAAACGCCGTACTGCATTTGTGCTGATGATTGTCAATGTGCAGTGGACTATCTCCTCTTTATCGTTCGAGATGTGAAAGTGAACCCGAACCCGGACGAAGTGGCGGACGTGAAATACGTGAACAAGGAGCAGCTGAAGGAGCTTCTGAGAAAAGCAGATGCAGGAGAAGAGGGGTTGAAGCTCTCGCCTTGGTTCAGGCTTGTTGTGGACAATTTCCTGTTCAAATGGTGGGATCATGTGGAGAAGGGGACTCTCAAGGAAGCTGCTGACATGAAAACCATTCACAAGTTGACTTGAGAAGAGAGAAGACATTGTCAATCTTCTTGTTGTGTTTGTTTGTTTCTAATAAGATCTGAACCTTATCTATGCTTATTTTTCCCCGTCTTTGCATGTTTCATCGTTTTCGGCACAACGTCGCATCTCATTGTCATCTTAGTTCTCAACAACACGATCTATACATTGTGATGCTATCTCATGTCTTAGGACAGCTCGGTCATTTTGGCTTGCTTGCTTGGATACATCTATTGGGAACTGATCCATGTGTCGATCATCTCATCGGGACATTCTGAACATCCATCTATCTGGGTTCTCTCAAGCATTAGACTCTCCCGCATCTATGCTAAACCATTTACGGCATACGTTCCAGATACTTTCAACGTTCTATAAACTCATCACATTTAGAGCAGCTTCTCTTTCCTTCAGTTCAACAATATGTGGACGGAAAATTCACAATTTTGATCCCATCTCGAGTACTTTACAATTATTGGATCTAAAACGACCAATTTTCCGATGTCTATTTAATTTTTTTTTATATTTGATATAATATATTATAAAGAATGTTTTTATTTCTCTATTTTCTTAAAAATAAAATCTTGTTGATGATTTTTTTTCTTTATTATTATTTAGTCAACAAATTGGAGATATGAATATTTAATTTGATGNCTCCATTGCTCTGATTTGCTTCATTTGGGGGGAAGAACTAAACTCGAAGCCTGATTTTTGTGTTTATGATTTGCTGAACCAGTTGAATTGGGTCTCAATTGAGGTTCCTGATGAAATAATTTGCAACAATTTGTACAATACCATGTTTGAATTTGGATGACTATCATGTCCCCGACTTTAATGGTCTTCTCACATCCTTGTCTCTCTCTCTCTCTTGCTGATATTATCTTTCATCAATTCATTTCACCTTTTTTACGGGTTTTATGCATTGTTCTTGCTTTTGACTTTGATTTTTACATCATCATATAGTTAATAGATCCCCTCTTTTCTCTACTTTGTCTTATTGACATGTTCTCTGTATTTGAATGGGGAAGGAATCAAATCAAAGCCTCTTTTTCTCCGTCAACGGGGTGAAAATTGTTGATTAGGCATTTCAAACCAGTCGAATTGGGTTTCATTCATTTGAGGTTCCTGCTGATGATTTGATGCTTAAAATTTTCTGGAATGATGAACATCTGTGGCACAATAATAAGGATGGAAAATGATTTGATGCTTAAAATTCCATACCTTTTGATCTGTAAGTAATGATGGAAAATGTTCTTTGTCATGTTAAATCATCACTAAATTCAAAAAGCTGAAATCTGTGATGAATCTAATTCTCTTCTAGTTCAACAACCAGTAAGGTTAAGGGATTCGAATCTCTAAACTATGCTCATGTTGGCGAGTAATCCAACTGTTTAATATATTTCCCGAGCTTCTACGTTTTTGTTTCGGTGAACTCAGGGATTGTTATGTGTCATACCTTAATGCTTGTAACTGGTTCATCATTTTATTCTTCAACATCGTTTTTTTCGCCTCGTTTTTATGTGAATTGTAATGTGTCATCCTTTTTCGTTTCTCTCTCGTGACCCTTTACCTTGGCTTCACTGGATCACTGTGGCTATTACTCTAAAATATCATGTATTCTCATCTGCTCGATGATGTCTTGATCAGAATTCAAGGGAATTGATGGTTTTGTGTGCATATATCAGGCCTTCATTTCTGTTAGAAACCTTTAAAATAAATCATGCTTGCTCAATCATTTTTGGCTCACACGTTCCTCGTATTGGTCTCGAATTCATGGTCAGGTGCATTTTAGTGGACGAGAACGACCGAGTCGTTGGTCATGAATCCAAGTACAACTGTAAGTCAAATCTTATATCCAGTATTGATTTCTTAGAAGCTAGTTTCCTTGTTATTGGCTATAGTTTTGAGCTTGGATAGTGGATTAATGCAGAACAAATATTTGTTCTTCTAACCTGCAGGTCACTTGATGGAAAATATTGAATCTAAGAACTGGCTGCATCGCGCGTTCAGCGTCTTTTTATTCAACTCGAAATATGAATTGCTTCTTCAGGTATGTTATTCGGGTCGGGTTTTGATTTGCACTGCCTGTGCATAGTTTGCTCTATTAAATGATGTCTTTGACAGATTAGAACGTTTGTTTTCATGGCATGGATGGTTTCTTGAGCTTTCTTGTTTCTTGTTAAGTAATACTTTTCAATCAGTTAGTTGAGTATGCTAACTCGTTGGGAGAAATCGATTTCTGTATTCTGATTGCGGAAGCTGTTAACTCACTTGATTCTGTATTACTTCTGAAGCAACGATCTGCGACGAAAGTGACGTTTCCGCTTGTCTGGACGAACACTTGCTGCAGCCATCCATTGTATAGAGAATCTGAACTAATTGAGGAGGATGCTCTTGGTATGTCTGTAACAACACAATCAGAGCTGACCCCTACACGTTTTGAACCTCCTAATATGGATCTTCCTTTTCATGTACAATAACCAGGTGCAAGGAATGCTGCCCAGAGGAAGCTTTTGGATGAACTCGGTATTCCTGCAGAAGACGTCCCAGTCGACCAGTTCACTCCCCTGGGTCGCATGCTATACAAGGCGCCCTCGGATGGCATATGGGGGGAACATGAATGTACTTTCCTTAGCTCATCTGTTTAAAAACGCCGTACTGCATTTGTGCTGATGATTGTCAATGTGCAGTGGACTATCTCCTCTTTATCGTTCGAGATGTGAAAGTGAACCCGAACCCGGACGAAGTGGCGGACGTGAAATACGTGAACAAGGAGCAGCTGAAGGAGCTTCTGAGAAAAGCAGATGCAGGAGAAGAGGGGTTGAAGCTCTCGCCTTGGTTCAGGCTTGTTGTGGACAATTTCCTGTTCAAATGGTGGGATCATGTGGAGAAGGGGACTCTCAAGGAAGCTGCTGACATGAAAACCATTCACAAGTTGACTTGAGAAGAGAGAAGACATTGTCAATCTTCTTGTTGTGTTTGTTTGTTTCTAATAAGATCTGAACCTTATCTATG

mRNA sequence

ATGAATTCTTCTCTCGCTTCTTCCTTCCAATCCCACCGCTGCTTCGCCATGGCAGATGCCCTTCCTGATGCTGCCATGGACGCCGTCCAGAAGCGCCTCATGTTCGACGACGAGTGCATTTTAGTGGACGAGAACGACCGAGTCGTTGGTCATGAATCCAAGTACAACTGTCACTTGATGGAAAATATTGAATCTAAGAACTGGCTGCATCGCGCGTTCAGCGTCTTTTTATTCAACTCGAAATATGAATTGCTTCTTCAGCAACGATCTGCGACGAAAGTGACGTTTCCGCTTGTCTGGACGAACACTTGCTGCAGCCATCCATTGTATAGAGAATCTGAACTAATTGAGGAGGATGCTCTTGGTGCAAGGAATGCTGCCCAGAGGAAGCTTTTGGATGAACTCGGTATTCCTGCAGAAGACGTCCCAGTCGACCAGTTCACTCCCCTGGGTCGCATGCTATACAAGGCGCCCTCGGATGGCATATGGGGGGAACATGAATTGGACTATCTCCTCTTTATCGTTCGAGATGTGAAAGTGAACCCGAACCCGGACGAAGTGGCGGACGTGAAATACGTGAACAAGGAGCAGCTGAAGGAGCTTCTGAGAAAAGCAGATGCAGGAGAAGAGGGGTTGAAGCTCTCGCCTTGGTTCAGGCTTGTTGTGGACAATTTCCTGTTCAAATGGTGGGATCATGTGGAGAAGGGGACTCTCAAGGAAGCTGCTGACATGAAAACCATTCACAAGCCTTCATTTCTGTTAGAAACCTTTAAAATAAATCATGCTTGCTCAATCATTTTTGGCTCACACGTTCCTCGTATTGGTCTCGAATTCATGGTCAGGTGCATTTTAGTGGACGAGAACGACCGAGTCGTTGGTCATGAATCCAAGTACAACTGTCACTTGATGGAAAATATTGAATCTAAGAACTGGCTGCATCGCGCGTTCAGCGTCTTTTTATTCAACTCGAAATATGAATTGCTTCTTCAGCAACGATCTGCGACGAAAGTGACGTTTCCGCTTGTCTGGACGAACACTTGCTGCAGCCATCCATTGTATAGAGAATCTGAACTAATTGAGGAGGATGCTCTTGGTGCAAGGAATGCTGCCCAGAGGAAGCTTTTGGATGAACTCGGTATTCCTGCAGAAGACGTCCCAGTCGACCAGTTCACTCCCCTGGGTCGCATGCTATACAAGGCGCCCTCGGATGGCATATGGGGGGAACATGAATTGGACTATCTCCTCTTTATCGTTCGAGATGTGAAAGTGAACCCGAACCCGGACGAAGTGGCGGACGTGAAATACGTGAACAAGGAGCAGCTGAAGGAGCTTCTGAGAAAAGCAGATGCAGGAGAAGAGGGGTTGAAGCTCTCGCCTTGGTTCAGGCTTGTTGTGGACAATTTCCTGTTCAAATGGTGGGATCATGTGGAGAAGGGGACTCTCAAGGAAGCTGCTGACATGAAAACCATTCACAAGTTGACTTGAGAAGAGAGAAGACATTGTCAATCTTCTTGTTGTGTTTGTTTGTTTCTAATAAGATCTGAACCTTATCTATG

Coding sequence (CDS)

ATGAATTCTTCTCTCGCTTCTTCCTTCCAATCCCACCGCTGCTTCGCCATGGCAGATGCCCTTCCTGATGCTGCCATGGACGCCGTCCAGAAGCGCCTCATGTTCGACGACGAGTGCATTTTAGTGGACGAGAACGACCGAGTCGTTGGTCATGAATCCAAGTACAACTGTCACTTGATGGAAAATATTGAATCTAAGAACTGGCTGCATCGCGCGTTCAGCGTCTTTTTATTCAACTCGAAATATGAATTGCTTCTTCAGCAACGATCTGCGACGAAAGTGACGTTTCCGCTTGTCTGGACGAACACTTGCTGCAGCCATCCATTGTATAGAGAATCTGAACTAATTGAGGAGGATGCTCTTGGTGCAAGGAATGCTGCCCAGAGGAAGCTTTTGGATGAACTCGGTATTCCTGCAGAAGACGTCCCAGTCGACCAGTTCACTCCCCTGGGTCGCATGCTATACAAGGCGCCCTCGGATGGCATATGGGGGGAACATGAATTGGACTATCTCCTCTTTATCGTTCGAGATGTGAAAGTGAACCCGAACCCGGACGAAGTGGCGGACGTGAAATACGTGAACAAGGAGCAGCTGAAGGAGCTTCTGAGAAAAGCAGATGCAGGAGAAGAGGGGTTGAAGCTCTCGCCTTGGTTCAGGCTTGTTGTGGACAATTTCCTGTTCAAATGGTGGGATCATGTGGAGAAGGGGACTCTCAAGGAAGCTGCTGACATGAAAACCATTCACAAGCCTTCATTTCTGTTAGAAACCTTTAAAATAAATCATGCTTGCTCAATCATTTTTGGCTCACACGTTCCTCGTATTGGTCTCGAATTCATGGTCAGGTGCATTTTAGTGGACGAGAACGACCGAGTCGTTGGTCATGAATCCAAGTACAACTGTCACTTGATGGAAAATATTGAATCTAAGAACTGGCTGCATCGCGCGTTCAGCGTCTTTTTATTCAACTCGAAATATGAATTGCTTCTTCAGCAACGATCTGCGACGAAAGTGACGTTTCCGCTTGTCTGGACGAACACTTGCTGCAGCCATCCATTGTATAGAGAATCTGAACTAATTGAGGAGGATGCTCTTGGTGCAAGGAATGCTGCCCAGAGGAAGCTTTTGGATGAACTCGGTATTCCTGCAGAAGACGTCCCAGTCGACCAGTTCACTCCCCTGGGTCGCATGCTATACAAGGCGCCCTCGGATGGCATATGGGGGGAACATGAATTGGACTATCTCCTCTTTATCGTTCGAGATGTGAAAGTGAACCCGAACCCGGACGAAGTGGCGGACGTGAAATACGTGAACAAGGAGCAGCTGAAGGAGCTTCTGAGAAAAGCAGATGCAGGAGAAGAGGGGTTGAAGCTCTCGCCTTGGTTCAGGCTTGTTGTGGACAATTTCCTGTTCAAATGGTGGGATCATGTGGAGAAGGGGACTCTCAAGGAAGCTGCTGACATGAAAACCATTCACAAGTTGACTTGA

Protein sequence

MNSSLASSFQSHRCFAMADALPDAAMDAVQKRLMFDDECILVDENDRVVGHESKYNCHLMENIESKNWLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDELGIPAEDVPVDQFTPLGRMLYKAPSDGIWGEHELDYLLFIVRDVKVNPNPDEVADVKYVNKEQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTLKEAADMKTIHKPSFLLETFKINHACSIIFGSHVPRIGLEFMVRCILVDENDRVVGHESKYNCHLMENIESKNWLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDELGIPAEDVPVDQFTPLGRMLYKAPSDGIWGEHELDYLLFIVRDVKVNPNPDEVADVKYVNKEQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTLKEAADMKTIHKLT

Homology

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BLAST of Cp4.1LG18g02500 vs. Swiss-Prot
Match: IDI1_CAMAC (Isopentenyl-diphosphate Delta-isomerase I OS=Camptotheca acuminata GN=IPI1 PE=2 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 4.9e-122
Identity = 208/233 (89.27%), Postives = 221/233 (94.85%), Query Frame = 1


Query: 17  MADALPDAAMDAVQKRLMFDDECILVDENDRVVGHESKYNCHLMENIESKNWLHRAFSVF 76
           M DA  DA MDAVQKRLMF+D+CILVDEND VVGH++KYNCHLME IES+N LHRAFSVF
Sbjct: 1   MGDAATDAGMDAVQKRLMFEDKCILVDENDNVVGHDTKYNCHLMEKIESENLLHRAFSVF 60

Query: 77  LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDELG 136
           LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELI+E+ALGARNAAQRKLLDELG
Sbjct: 61  LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIKENALGARNAAQRKLLDELG 120

Query: 137 IPAEDVPVDQFTPLGRMLYKAPSDGIWGEHELDYLLFIVRDVKVNPNPDEVADVKYVNKE 196
           IPAEDVPVDQF PLGR+LYKAPSDG WGEHELDYLLFIVRDV VNPNPDEVAD+KYV ++
Sbjct: 121 IPAEDVPVDQFIPLGRILYKAPSDGKWGEHELDYLLFIVRDVNVNPNPDEVADIKYVTRD 180

Query: 197 QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTLKEAADMKTIHK 250
           QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGT+ EAADMK+IHK
Sbjct: 181 QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTMHEAADMKSIHK 233

[Close]

BLAST of Cp4.1LG18g02500 vs. Swiss-Prot
Match: IDI2_CAMAC (Isopentenyl-diphosphate Delta-isomerase II OS=Camptotheca acuminata GN=IPI2 PE=2 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 4.5e-120
Identity = 203/234 (86.75%), Postives = 218/234 (93.16%), Query Frame = 1


Query: 16  AMADALPDAAMDAVQKRLMFDDECILVDENDRVVGHESKYNCHLMENIESKNWLHRAFSV 75
           AM D   DA MDAVQ+RLMF+DECILVDEND VVGH++KYNCHLME IES N LHRAFSV
Sbjct: 74  AMGDTATDAGMDAVQRRLMFEDECILVDENDHVVGHDTKYNCHLMEKIESDNLLHRAFSV 133

Query: 76  FLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDEL 135
           FLFNSKYELLLQQRSATKVTFPLVWTNTCCSHP YRESEL++E+ALG RNAAQRKLLDEL
Sbjct: 134 FLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPRYRESELVDENALGVRNAAQRKLLDEL 193

Query: 136 GIPAEDVPVDQFTPLGRMLYKAPSDGIWGEHELDYLLFIVRDVKVNPNPDEVADVKYVNK 195
           GIPAEDVPVDQF PLGRMLYKAPSDG WGEHELDYLLFI+RDV V+PNPDEVADVKYVN+
Sbjct: 194 GIPAEDVPVDQFIPLGRMLYKAPSDGKWGEHELDYLLFIIRDVNVHPNPDEVADVKYVNQ 253

Query: 196 EQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTLKEAADMKTIHK 250
           +QLK+LLRK DAGEEGLKLSPWFRLVV+NFLFKWWDHVEKGTL++A DMKTIHK
Sbjct: 254 DQLKDLLRKVDAGEEGLKLSPWFRLVVENFLFKWWDHVEKGTLQDATDMKTIHK 307

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BLAST of Cp4.1LG18g02500 vs. Swiss-Prot
Match: IDI2_ARATH (Isopentenyl-diphosphate Delta-isomerase II, chloroplastic OS=Arabidopsis thaliana GN=IPP2 PE=1 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 1.5e-118
Identity = 205/242 (84.71%), Postives = 223/242 (92.15%), Query Frame = 1


Query: 8   SFQSHRCFAMADALPDAAMDAVQKRLMFDDECILVDENDRVVGHESKYNCHLMENIESKN 67
           +F++    AM D   DA MDAVQ+RLMF+DECILVDE DRVVGH+SKYNCHLMENIE+KN
Sbjct: 43  NFRAFSGTAMTDT-KDAGMDAVQRRLMFEDECILVDETDRVVGHDSKYNCHLMENIEAKN 102

Query: 68  WLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAA 127
            LHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+++ALG RNAA
Sbjct: 103 LLHRAFSVFLFNSKYELLLQQRSNTKVTFPLVWTNTCCSHPLYRESELIQDNALGVRNAA 162

Query: 128 QRKLLDELGIPAEDVPVDQFTPLGRMLYKAPSDGIWGEHELDYLLFIVRDVKVNPNPDEV 187
           QRKLLDELGI AEDVPVD+FTPLGRMLYKAPSDG WGEHELDYLLFIVRDVKV PNPDEV
Sbjct: 163 QRKLLDELGIVAEDVPVDEFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVKVQPNPDEV 222

Query: 188 ADVKYVNKEQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTLKEAADMKTI 247
           A++KYV++E+LKEL++KADAGEEGLKLSPWFRLVVDNFL KWWDHVEKGTL EA DMKTI
Sbjct: 223 AEIKYVSREELKELVKKADAGEEGLKLSPWFRLVVDNFLMKWWDHVEKGTLVEAIDMKTI 282

Query: 248 HK 250
           HK
Sbjct: 283 HK 283

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BLAST of Cp4.1LG18g02500 vs. Swiss-Prot
Match: IDI2_CLAXA (Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia xantiana GN=IPI2 PE=3 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 1.2e-117
Identity = 203/233 (87.12%), Postives = 215/233 (92.27%), Query Frame = 1


Query: 16  AMADALPDAAMDAVQKRLMFDDECILVDENDRVVGHESKYNCHLMENIESKNWLHRAFSV 75
           AM +A  DA MDAVQ+RLMFDDECILVDE D VVGHESKYNCHL E IES N LHRAF+V
Sbjct: 56  AMGEAAADAGMDAVQRRLMFDDECILVDEVDCVVGHESKYNCHLWEKIESGNMLHRAFTV 115

Query: 76  FLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDEL 135
           FLFNSK+ELLLQQRSATKVTFPLVWTNTCCSHPLYRESELI+E+ LG RNAAQRKLLDEL
Sbjct: 116 FLFNSKFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENNLGVRNAAQRKLLDEL 175

Query: 136 GIPAEDVPVDQFTPLGRMLYKAPSDGIWGEHELDYLLFIVRDVKVNPNPDEVADVKYVNK 195
           GIPAEDVPVD+FTP+ RMLYKAPSDG WGEHELDYLLFIVRDV ++PNPDEVAD+KYVN+
Sbjct: 176 GIPAEDVPVDEFTPVSRMLYKAPSDGKWGEHELDYLLFIVRDVGIHPNPDEVADIKYVNR 235

Query: 196 EQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTLKEAADMKTIH 249
           EQLKELLRKADAGEEGLKLSPWFRLVVDNFL KWWDHVEKGTL EA DMKTIH
Sbjct: 236 EQLKELLRKADAGEEGLKLSPWFRLVVDNFLPKWWDHVEKGTLSEAVDMKTIH 288

[Close]

BLAST of Cp4.1LG18g02500 vs. Swiss-Prot
Match: IDI1_CLABR (Isopentenyl-diphosphate Delta-isomerase I OS=Clarkia breweri GN=IPI1 PE=2 SV=2)

HSP 1 Score: 424.5 bits (1090), Expect = 1.6e-117
Identity = 198/227 (87.22%), Postives = 216/227 (95.15%), Query Frame = 1


Query: 23  DAAMDAVQKRLMFDDECILVDENDRVVGHESKYNCHLMENIESKNWLHRAFSVFLFNSKY 82
           DA MDAVQ+RLMF+DECILVDEND+VVGHESKYNCHLME IES+N LHRAFSVFLFNSKY
Sbjct: 60  DAGMDAVQRRLMFEDECILVDENDKVVGHESKYNCHLMEKIESENLLHRAFSVFLFNSKY 119

Query: 83  ELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDELGIPAEDV 142
           ELLLQQRSATKVTFPLVWTNTCCSHPLYRESELI+E+ LG RNAAQRKLLDELGIPAED+
Sbjct: 120 ELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENCLGVRNAAQRKLLDELGIPAEDL 179

Query: 143 PVDQFTPLGRMLYKAPSDGIWGEHELDYLLFIVRDVKVNPNPDEVADVKYVNKEQLKELL 202
           PVDQF PL R+LYKAPSDG WGEHELDYLLFI+RDV ++PNPDEVA+VKY+N++ LKELL
Sbjct: 180 PVDQFIPLSRILYKAPSDGKWGEHELDYLLFIIRDVNLDPNPDEVAEVKYMNRDDLKELL 239

Query: 203 RKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTLKEAADMKTIHK 250
           RKADA EEG+KLSPWFRLVVDNFLFKWWDHVEKG+LK+AADMKTIHK
Sbjct: 240 RKADAEEEGVKLSPWFRLVVDNFLFKWWDHVEKGSLKDAADMKTIHK 286

[Close]

BLAST of Cp4.1LG18g02500 vs. TrEMBL
Match: A0A0A0M046_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G656460 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 1.6e-127
Identity = 224/233 (96.14%), Postives = 225/233 (96.57%), Query Frame = 1


Query: 17  MADALPDAAMDAVQKRLMFDDECILVDENDRVVGHESKYNCHLMENIESKNWLHRAFSVF 76
           M  ALPDAAMDAVQKRLMF+DECILVDEND VVGHESKYNCHLMENIESKNWLHRAFSVF
Sbjct: 1   MGVALPDAAMDAVQKRLMFEDECILVDENDCVVGHESKYNCHLMENIESKNWLHRAFSVF 60

Query: 77  LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDELG 136
           LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDELG
Sbjct: 61  LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDELG 120

Query: 137 IPAEDVPVDQFTPLGRMLYKAPSDGIWGEHELDYLLFIVRDVKVNPNPDEVADVKYVNKE 196
           IPAEDVPVDQF PLGRMLYKAPSDG WGEHELDYLLFIVRDV VNPNPDEVADVKYV KE
Sbjct: 121 IPAEDVPVDQFIPLGRMLYKAPSDGKWGEHELDYLLFIVRDVNVNPNPDEVADVKYVTKE 180

Query: 197 QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTLKEAADMKTIHK 250
           QLKELLRKADAGEEGLKLSPWFRLVVDNFLF WWDHVEKGTLKEAADMKTIHK
Sbjct: 181 QLKELLRKADAGEEGLKLSPWFRLVVDNFLFSWWDHVEKGTLKEAADMKTIHK 233

[Close]

BLAST of Cp4.1LG18g02500 vs. TrEMBL
Match: K7NBZ8_SIRGR (Isopentenyl diphosphate isomerase OS=Siraitia grosvenorii PE=2 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 2.7e-127
Identity = 228/242 (94.21%), Postives = 230/242 (95.04%), Query Frame = 1


Query: 8   SFQSHRCFAMADALPDAAMDAVQKRLMFDDECILVDENDRVVGHESKYNCHLMENIESKN 67
           S QS R  AM D  PDAAMDAVQKRLMF+DECILVDENDRVVGHESKYNCHLMENIESKN
Sbjct: 38  SLQSPR-LAMGDT-PDAAMDAVQKRLMFEDECILVDENDRVVGHESKYNCHLMENIESKN 97

Query: 68  WLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAA 127
           WLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEE+ALGARNAA
Sbjct: 98  WLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEENALGARNAA 157

Query: 128 QRKLLDELGIPAEDVPVDQFTPLGRMLYKAPSDGIWGEHELDYLLFIVRDVKVNPNPDEV 187
           QRK LDELGIPAEDVPVDQF PLGRMLYKAPSDG WGEHELDYLLFIVRDV VNPNPDEV
Sbjct: 158 QRKPLDELGIPAEDVPVDQFIPLGRMLYKAPSDGKWGEHELDYLLFIVRDVNVNPNPDEV 217

Query: 188 ADVKYVNKEQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTLKEAADMKTI 247
           ADVKYVNKEQLKELLRKADAGEEGLKLSPWFRLVVDNFLF WWDHVEKGTLKEAADMKTI
Sbjct: 218 ADVKYVNKEQLKELLRKADAGEEGLKLSPWFRLVVDNFLFNWWDHVEKGTLKEAADMKTI 277

Query: 248 HK 250
           HK
Sbjct: 278 HK 277

[Close]

BLAST of Cp4.1LG18g02500 vs. TrEMBL
Match: A9LRT7_SOLLC (Isopentenyl diphosphate isomerase OS=Solanum lycopersicum GN=IPI PE=2 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 1.5e-122
Identity = 213/233 (91.42%), Postives = 223/233 (95.71%), Query Frame = 1


Query: 17  MADALPDAAMDAVQKRLMFDDECILVDENDRVVGHESKYNCHLMENIESKNWLHRAFSVF 76
           M D + DA MDAVQ+RLMFDDECILVD ND+VVGHESKYNCHLME IES+N LHRAFSVF
Sbjct: 1   MVDVIADANMDAVQRRLMFDDECILVDVNDKVVGHESKYNCHLMEKIESENLLHRAFSVF 60

Query: 77  LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDELG 136
           LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEE+ALG RNAAQRKLLDELG
Sbjct: 61  LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELG 120

Query: 137 IPAEDVPVDQFTPLGRMLYKAPSDGIWGEHELDYLLFIVRDVKVNPNPDEVADVKYVNKE 196
           IPAEDVPVDQFTPLGRMLYKAPSDG WGEHELDYLLFIVRDV V+PNPDEVAD+KYVN+E
Sbjct: 121 IPAEDVPVDQFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVNVHPNPDEVADIKYVNQE 180

Query: 197 QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTLKEAADMKTIHK 250
           QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGT++EAADMKTIHK
Sbjct: 181 QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTIQEAADMKTIHK 233

[Close]

BLAST of Cp4.1LG18g02500 vs. TrEMBL
Match: M1C547_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400023359 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 4.4e-122
Identity = 212/233 (90.99%), Postives = 223/233 (95.71%), Query Frame = 1


Query: 17  MADALPDAAMDAVQKRLMFDDECILVDENDRVVGHESKYNCHLMENIESKNWLHRAFSVF 76
           M D + DA MDAVQ+RLMFDDECILVD ND+VVGHESKYNCHLME IE++N LHRAFSVF
Sbjct: 1   MVDVVADANMDAVQRRLMFDDECILVDVNDKVVGHESKYNCHLMEKIEAENLLHRAFSVF 60

Query: 77  LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDELG 136
           LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEE+ALG RNAAQRKLLDELG
Sbjct: 61  LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELG 120

Query: 137 IPAEDVPVDQFTPLGRMLYKAPSDGIWGEHELDYLLFIVRDVKVNPNPDEVADVKYVNKE 196
           IPAEDVPVDQFTPLGRMLYKAPSDG WGEHELDYLLFIVRDV V+PNPDEVAD+KYVN+E
Sbjct: 121 IPAEDVPVDQFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVNVHPNPDEVADIKYVNQE 180

Query: 197 QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTLKEAADMKTIHK 250
           QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGT++EAADMKTIHK
Sbjct: 181 QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTIQEAADMKTIHK 233

[Close]

BLAST of Cp4.1LG18g02500 vs. TrEMBL
Match: A0A022RI88_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a010795mg PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 1.7e-121
Identity = 210/233 (90.13%), Postives = 223/233 (95.71%), Query Frame = 1


Query: 17  MADALPDAAMDAVQKRLMFDDECILVDENDRVVGHESKYNCHLMENIESKNWLHRAFSVF 76
           M DA  D+AMDAVQ+RLMF+DECILVDENDRVVGH+SKYNCHLME IES+N LHRAFSVF
Sbjct: 67  MGDAAADSAMDAVQRRLMFEDECILVDENDRVVGHDSKYNCHLMEKIESENLLHRAFSVF 126

Query: 77  LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDELG 136
           LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYR+SELIEE ALGARNAAQRKL DELG
Sbjct: 127 LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRDSELIEEKALGARNAAQRKLFDELG 186

Query: 137 IPAEDVPVDQFTPLGRMLYKAPSDGIWGEHELDYLLFIVRDVKVNPNPDEVADVKYVNKE 196
           IPAEDVPVDQFTPLGR+LYKAPSDG WGEHELDYLLFI+RDV V+PNPDEV DVKYVN++
Sbjct: 187 IPAEDVPVDQFTPLGRILYKAPSDGKWGEHELDYLLFIIRDVSVHPNPDEVVDVKYVNQQ 246

Query: 197 QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTLKEAADMKTIHK 250
           QLKELLRKADAGEEG+KLSPWFRLVVDNFLFKWWDHVEKGTL+EAADMKTIHK
Sbjct: 247 QLKELLRKADAGEEGIKLSPWFRLVVDNFLFKWWDHVEKGTLEEAADMKTIHK 299

[Close]

BLAST of Cp4.1LG18g02500 vs. TAIR10
Match: AT3G02780.1 (AT3G02780.1 isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2)

HSP 1 Score: 427.9 bits (1099), Expect = 8.2e-120
Identity = 205/242 (84.71%), Postives = 223/242 (92.15%), Query Frame = 1


Query: 8   SFQSHRCFAMADALPDAAMDAVQKRLMFDDECILVDENDRVVGHESKYNCHLMENIESKN 67
           +F++    AM D   DA MDAVQ+RLMF+DECILVDE DRVVGH+SKYNCHLMENIE+KN
Sbjct: 43  NFRAFSGTAMTDT-KDAGMDAVQRRLMFEDECILVDETDRVVGHDSKYNCHLMENIEAKN 102

Query: 68  WLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAA 127
            LHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+++ALG RNAA
Sbjct: 103 LLHRAFSVFLFNSKYELLLQQRSNTKVTFPLVWTNTCCSHPLYRESELIQDNALGVRNAA 162

Query: 128 QRKLLDELGIPAEDVPVDQFTPLGRMLYKAPSDGIWGEHELDYLLFIVRDVKVNPNPDEV 187
           QRKLLDELGI AEDVPVD+FTPLGRMLYKAPSDG WGEHELDYLLFIVRDVKV PNPDEV
Sbjct: 163 QRKLLDELGIVAEDVPVDEFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVKVQPNPDEV 222

Query: 188 ADVKYVNKEQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTLKEAADMKTI 247
           A++KYV++E+LKEL++KADAGEEGLKLSPWFRLVVDNFL KWWDHVEKGTL EA DMKTI
Sbjct: 223 AEIKYVSREELKELVKKADAGEEGLKLSPWFRLVVDNFLMKWWDHVEKGTLVEAIDMKTI 282

Query: 248 HK 250
           HK
Sbjct: 283 HK 283

[Close]

BLAST of Cp4.1LG18g02500 vs. TAIR10
Match: AT5G16440.1 (AT5G16440.1 isopentenyl diphosphate isomerase 1)

HSP 1 Score: 418.7 bits (1075), Expect = 5.0e-117
Identity = 194/227 (85.46%), Postives = 214/227 (94.27%), Query Frame = 1


Query: 23  DAAMDAVQKRLMFDDECILVDENDRVVGHESKYNCHLMENIESKNWLHRAFSVFLFNSKY 82
           DA MDAVQ+RLMF+DECILVDENDRVVGH++KYNCHLME IE++N LHRAFSVFLFNSKY
Sbjct: 64  DAGMDAVQRRLMFEDECILVDENDRVVGHDTKYNCHLMEKIEAENLLHRAFSVFLFNSKY 123

Query: 83  ELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDELGIPAEDV 142
           ELLLQQRS TKVTFPLVWTNTCCSHPLYRESELIEE+ LG RNAAQRKL DELGI AEDV
Sbjct: 124 ELLLQQRSKTKVTFPLVWTNTCCSHPLYRESELIEENVLGVRNAAQRKLFDELGIVAEDV 183

Query: 143 PVDQFTPLGRMLYKAPSDGIWGEHELDYLLFIVRDVKVNPNPDEVADVKYVNKEQLKELL 202
           PVD+FTPLGRMLYKAPSDG WGEHE+DYLLFIVRDVK+ PNPDEVA++KYV++E+LKEL+
Sbjct: 184 PVDEFTPLGRMLYKAPSDGKWGEHEVDYLLFIVRDVKLQPNPDEVAEIKYVSREELKELV 243

Query: 203 RKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTLKEAADMKTIHK 250
           +KADAG+E +KLSPWFRLVVDNFL KWWDHVEKGT+ EAADMKTIHK
Sbjct: 244 KKADAGDEAVKLSPWFRLVVDNFLMKWWDHVEKGTITEAADMKTIHK 290

[Close]

BLAST of Cp4.1LG18g02500 vs. NCBI nr
Match: gi|659085944|ref|XP_008443691.1| (PREDICTED: LOW QUALITY PROTEIN: isopentenyl-diphosphate Delta-isomerase I [Cucumis melo])

HSP 1 Score: 471.9 bits (1213), Expect = 1.4e-129
Identity = 226/234 (96.58%), Postives = 228/234 (97.44%), Query Frame = 1


Query: 16  AMADALPDAAMDAVQKRLMFDDECILVDENDRVVGHESKYNCHLMENIESKNWLHRAFSV 75
           AM DALPDAAMDAVQKRLMF+DECILVDENDRVVGHESKYNCHLMENIESKNWLHRAFSV
Sbjct: 61  AMGDALPDAAMDAVQKRLMFEDECILVDENDRVVGHESKYNCHLMENIESKNWLHRAFSV 120

Query: 76  FLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDEL 135
           FLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDEL
Sbjct: 121 FLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDEL 180

Query: 136 GIPAEDVPVDQFTPLGRMLYKAPSDGIWGEHELDYLLFIVRDVKVNPNPDEVADVKYVNK 195
           GIPAEDVPV+QF PLGRMLYKAPSDG WGEHELDYLLFIVRDV VNPNPDEVADVKYVNK
Sbjct: 181 GIPAEDVPVEQFIPLGRMLYKAPSDGKWGEHELDYLLFIVRDVNVNPNPDEVADVKYVNK 240

Query: 196 EQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTLKEAADMKTIHK 250
           EQLKELLRK DAGEEGLKLSPWFRLVVDNFLF WWDHVEKGTLKEAADMKTIHK
Sbjct: 241 EQLKELLRKTDAGEEGLKLSPWFRLVVDNFLFSWWDHVEKGTLKEAADMKTIHK 294

[Close]

BLAST of Cp4.1LG18g02500 vs. NCBI nr
Match: gi|449442667|ref|XP_004139102.1| (PREDICTED: isopentenyl-diphosphate Delta-isomerase I [Cucumis sativus])

HSP 1 Score: 464.5 bits (1194), Expect = 2.3e-127
Identity = 224/233 (96.14%), Postives = 225/233 (96.57%), Query Frame = 1


Query: 17  MADALPDAAMDAVQKRLMFDDECILVDENDRVVGHESKYNCHLMENIESKNWLHRAFSVF 76
           M  ALPDAAMDAVQKRLMF+DECILVDEND VVGHESKYNCHLMENIESKNWLHRAFSVF
Sbjct: 1   MGVALPDAAMDAVQKRLMFEDECILVDENDCVVGHESKYNCHLMENIESKNWLHRAFSVF 60

Query: 77  LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDELG 136
           LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDELG
Sbjct: 61  LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDELG 120

Query: 137 IPAEDVPVDQFTPLGRMLYKAPSDGIWGEHELDYLLFIVRDVKVNPNPDEVADVKYVNKE 196
           IPAEDVPVDQF PLGRMLYKAPSDG WGEHELDYLLFIVRDV VNPNPDEVADVKYV KE
Sbjct: 121 IPAEDVPVDQFIPLGRMLYKAPSDGKWGEHELDYLLFIVRDVNVNPNPDEVADVKYVTKE 180

Query: 197 QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTLKEAADMKTIHK 250
           QLKELLRKADAGEEGLKLSPWFRLVVDNFLF WWDHVEKGTLKEAADMKTIHK
Sbjct: 181 QLKELLRKADAGEEGLKLSPWFRLVVDNFLFSWWDHVEKGTLKEAADMKTIHK 233

[Close]

BLAST of Cp4.1LG18g02500 vs. NCBI nr
Match: gi|343466167|gb|AEM42977.1| (isopentenyl diphosphate isomerase [Siraitia grosvenorii])

HSP 1 Score: 463.8 bits (1192), Expect = 3.8e-127
Identity = 228/242 (94.21%), Postives = 230/242 (95.04%), Query Frame = 1


Query: 8   SFQSHRCFAMADALPDAAMDAVQKRLMFDDECILVDENDRVVGHESKYNCHLMENIESKN 67
           S QS R  AM D  PDAAMDAVQKRLMF+DECILVDENDRVVGHESKYNCHLMENIESKN
Sbjct: 38  SLQSPR-LAMGDT-PDAAMDAVQKRLMFEDECILVDENDRVVGHESKYNCHLMENIESKN 97

Query: 68  WLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAA 127
           WLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEE+ALGARNAA
Sbjct: 98  WLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEENALGARNAA 157

Query: 128 QRKLLDELGIPAEDVPVDQFTPLGRMLYKAPSDGIWGEHELDYLLFIVRDVKVNPNPDEV 187
           QRK LDELGIPAEDVPVDQF PLGRMLYKAPSDG WGEHELDYLLFIVRDV VNPNPDEV
Sbjct: 158 QRKPLDELGIPAEDVPVDQFIPLGRMLYKAPSDGKWGEHELDYLLFIVRDVNVNPNPDEV 217

Query: 188 ADVKYVNKEQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTLKEAADMKTI 247
           ADVKYVNKEQLKELLRKADAGEEGLKLSPWFRLVVDNFLF WWDHVEKGTLKEAADMKTI
Sbjct: 218 ADVKYVNKEQLKELLRKADAGEEGLKLSPWFRLVVDNFLFNWWDHVEKGTLKEAADMKTI 277

Query: 248 HK 250
           HK
Sbjct: 278 HK 277

[Close]

BLAST of Cp4.1LG18g02500 vs. NCBI nr
Match: gi|697109348|ref|XP_009608528.1| (PREDICTED: isopentenyl-diphosphate Delta-isomerase I [Nicotiana tomentosiformis])

HSP 1 Score: 448.4 bits (1152), Expect = 1.7e-122
Identity = 213/233 (91.42%), Postives = 223/233 (95.71%), Query Frame = 1


Query: 17  MADALPDAAMDAVQKRLMFDDECILVDENDRVVGHESKYNCHLMENIESKNWLHRAFSVF 76
           M D + DA MDAVQ+RLMF+DECILVDENDRVVGH++KYNCHLME IES N LHRAFSVF
Sbjct: 1   MGDVVADANMDAVQRRLMFEDECILVDENDRVVGHDTKYNCHLMEKIESLNLLHRAFSVF 60

Query: 77  LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDELG 136
           LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEE+ALG RNAAQRKLLDELG
Sbjct: 61  LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELG 120

Query: 137 IPAEDVPVDQFTPLGRMLYKAPSDGIWGEHELDYLLFIVRDVKVNPNPDEVADVKYVNKE 196
           IPAEDVPVDQFTPLGRMLYKAPSDG WGEHELDYLLFIVRDV VNPNPDEVAD+KYVN+E
Sbjct: 121 IPAEDVPVDQFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVNVNPNPDEVADIKYVNQE 180

Query: 197 QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTLKEAADMKTIHK 250
           QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGT++EAADMKTIHK
Sbjct: 181 QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTIQEAADMKTIHK 233

[Close]

BLAST of Cp4.1LG18g02500 vs. NCBI nr
Match: gi|350538405|ref|NP_001234853.1| (isopentenyl diphosphate isomerase [Solanum lycopersicum])

HSP 1 Score: 448.0 bits (1151), Expect = 2.2e-122
Identity = 213/233 (91.42%), Postives = 223/233 (95.71%), Query Frame = 1


Query: 17  MADALPDAAMDAVQKRLMFDDECILVDENDRVVGHESKYNCHLMENIESKNWLHRAFSVF 76
           M D + DA MDAVQ+RLMFDDECILVD ND+VVGHESKYNCHLME IES+N LHRAFSVF
Sbjct: 1   MVDVIADANMDAVQRRLMFDDECILVDVNDKVVGHESKYNCHLMEKIESENLLHRAFSVF 60

Query: 77  LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGARNAAQRKLLDELG 136
           LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEE+ALG RNAAQRKLLDELG
Sbjct: 61  LFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELG 120

Query: 137 IPAEDVPVDQFTPLGRMLYKAPSDGIWGEHELDYLLFIVRDVKVNPNPDEVADVKYVNKE 196
           IPAEDVPVDQFTPLGRMLYKAPSDG WGEHELDYLLFIVRDV V+PNPDEVAD+KYVN+E
Sbjct: 121 IPAEDVPVDQFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVNVHPNPDEVADIKYVNQE 180

Query: 197 QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTLKEAADMKTIHK 250
           QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGT++EAADMKTIHK
Sbjct: 181 QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTIQEAADMKTIHK 233

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g02500 vs. Swiss-Prot


Match Name	E-value	Identity	Description
IDI1_CAMAC	4.9e-122	89.27	Isopentenyl-diphosphate Delta-isomerase I OS=Camptotheca acuminata GN=IPI1 PE=2 ...	[more]
IDI2_CAMAC	4.5e-120	86.75	Isopentenyl-diphosphate Delta-isomerase II OS=Camptotheca acuminata GN=IPI2 PE=2...	[more]
IDI2_ARATH	1.5e-118	84.71	Isopentenyl-diphosphate Delta-isomerase II, chloroplastic OS=Arabidopsis thalian...	[more]
IDI2_CLAXA	1.2e-117	87.12	Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia xantiana GN=IPI2 PE=3 SV=1	[more]
IDI1_CLABR	1.6e-117	87.22	Isopentenyl-diphosphate Delta-isomerase I OS=Clarkia breweri GN=IPI1 PE=2 SV=2	[more]

BLAST of Cp4.1LG18g02500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M046_CUCSA	1.6e-127	96.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G656460 PE=4 SV=1	[more]
K7NBZ8_SIRGR	2.7e-127	94.21	Isopentenyl diphosphate isomerase OS=Siraitia grosvenorii PE=2 SV=1	[more]
A9LRT7_SOLLC	1.5e-122	91.42	Isopentenyl diphosphate isomerase OS=Solanum lycopersicum GN=IPI PE=2 SV=1	[more]
M1C547_SOLTU	4.4e-122	90.99	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400023359 PE=4 SV=1	[more]
A0A022RI88_ERYGU	1.7e-121	90.13	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a010795mg PE=4 SV=1	[more]

BLAST of Cp4.1LG18g02500 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02780.1	8.2e-120	84.71	isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2	[more]
AT5G16440.1	5.0e-117	85.46	isopentenyl diphosphate isomerase 1	[more]

BLAST of Cp4.1LG18g02500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659085944\|ref\|XP_008443691.1\|	1.4e-129	96.58	PREDICTED: LOW QUALITY PROTEIN: isopentenyl-diphosphate Delta-isomerase I [Cucum...	[more]
gi\|449442667\|ref\|XP_004139102.1\|	2.3e-127	96.14	PREDICTED: isopentenyl-diphosphate Delta-isomerase I [Cucumis sativus]	[more]
gi\|343466167\|gb\|AEM42977.1\|	3.8e-127	94.21	isopentenyl diphosphate isomerase [Siraitia grosvenorii]	[more]
gi\|697109348\|ref\|XP_009608528.1\|	1.7e-122	91.42	PREDICTED: isopentenyl-diphosphate Delta-isomerase I [Nicotiana tomentosiformis]	[more]
gi\|350538405\|ref\|NP_001234853.1\|	2.2e-122	91.42	isopentenyl diphosphate isomerase [Solanum lycopersicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0008299	isoprenoid biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0004452	isopentenyl-diphosphate delta-isomerase activity
GO:0016787	hydrolase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR015797	NUDIX_hydrolase-like_dom_sf
IPR011876	IsopentenylPP_isomerase_typ1
IPR000086	NUDIX_hydrolase_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006694	steroid biosynthetic process
biological_process	GO:0016114	terpenoid biosynthetic process
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0050992	dimethylallyl diphosphate biosynthetic process
biological_process	GO:0015979	photosynthesis
biological_process	GO:0008299	isoprenoid biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0004452	isopentenyl-diphosphate delta-isomerase activity
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g02500.1	Cp4.1LG18g02500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 69..207 score: 2.6E-22coord: 312..450 score: 2.6
IPR000086	NUDIX hydrolase domain	PROFILE	PS51462	NUDIX	coord: 311..463 score: 17.789coord: 68..220 score: 17
IPR011876	Isopentenyl-diphosphate delta-isomerase, type 1	PANTHER	PTHR10885	ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE	coord: 23..251 score: 3.2E
IPR011876	Isopentenyl-diphosphate delta-isomerase, type 1	TIGRFAMs	TIGR02150	TIGR02150	coord: 39..221 score: 2.3E-58coord: 282..464 score: 2.3
IPR015797	NUDIX hydrolase domain-like	GENE3D	G3DSA:3.90.79.10		coord: 279..477 score: 4.1E-61coord: 30..234 score: 5.5
IPR015797	NUDIX hydrolase domain-like	unknown	SSF55811	Nudix	coord: 282..476 score: 4.98E-40coord: 38..233 score: 3.41
None	No IPR available	PANTHER	PTHR10885:SF4	SUBFAMILY NOT NAMED	coord: 23..251 score: 3.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG18g02500	CmoCh11G009570	Cucurbita moschata (Rifu)	cmocpeB104

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG18g02500	Silver-seed gourd	carcpeB0757
Cp4.1LG18g02500	Silver-seed gourd	carcpeB1341
Cp4.1LG18g02500	Cucumber (Chinese Long) v3	cpecucB0428
Cp4.1LG18g02500	Wax gourd	cpewgoB0468
Cp4.1LG18g02500	Wax gourd	cpewgoB0473
Cp4.1LG18g02500	Cucurbita pepo (Zucchini)	cpecpeB006
Cp4.1LG18g02500	Cucumber (Gy14) v1	cgycpeB0928
Cp4.1LG18g02500	Cucurbita maxima (Rimu)	cmacpeB080
Cp4.1LG18g02500	Cucurbita maxima (Rimu)	cmacpeB126
Cp4.1LG18g02500	Cucurbita moschata (Rifu)	cmocpeB055
Cp4.1LG18g02500	Wild cucumber (PI 183967)	cpecpiB350
Cp4.1LG18g02500	Cucumber (Chinese Long) v2	cpecuB349
Cp4.1LG18g02500	Bottle gourd (USVL1VR-Ls)	cpelsiB299
Cp4.1LG18g02500	Watermelon (Charleston Gray)	cpewcgB322
Cp4.1LG18g02500	Watermelon (97103) v1	cpewmB350
Cp4.1LG18g02500	Melon (DHL92) v3.5.1	cpemeB332
Cp4.1LG18g02500	Cucumber (Gy14) v2	cgybcpeB039
Cp4.1LG18g02500	Melon (DHL92) v3.6.1	cpemedB390