BLAST of Cp4.1LG18g01750 vs. Swiss-Prot
Match:
PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2)
HSP 1 Score: 163.3 bits (412), Expect = 3.8e-39
Identity = 94/270 (34.81%), Postives = 149/270 (55.19%), Query Frame = 1
Query: 14 PPKLSISSAQLSQIHAQLLTNPKPHVFNPLLGALVDSVAPENGLFLYNQM----LRHPSS 73
PP +S + S+I + ++N L+ + + LY +M L P +
Sbjct: 66 PPPMSYAHKVFSKIEKPI----NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDT 125
Query: 74 HNHYTFTYALKACFLLHETHKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSASRV 133
H T+ + +KA + + G IH+ +I+SG S I++QNSLLH Y GDV SA +V
Sbjct: 126 H---TYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKV 185
Query: 134 FDSIPDPDVVSWTSIISGLSKLGFKEEALGKFLSMN---VSPNSATLVSALSACSSLRCV 193
FD +P+ D+V+W S+I+G ++ G EEAL + MN + P+ T+VS LSAC+ + +
Sbjct: 186 FDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGAL 245
Query: 194 KIGKAIHGLKLRSLNVESVSLDNALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGY 253
+GK +H ++ ++ N LLD Y RCG + A+ LFDEM ++ VSWT+LI G
Sbjct: 246 TLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGL 305
Query: 254 ALTGLCEEAVRVFQNMVHAREAIPNEATLI 277
A+ G +EA+ +F+ M +P E T +
Sbjct: 306 AVNGFGKEAIELFKYMESTEGLLPCEITFV 328
BLAST of Cp4.1LG18g01750 vs. Swiss-Prot
Match:
PP355_ARATH (Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana GN=PCMP-E45 PE=3 SV=1)
HSP 1 Score: 158.7 bits (400), Expect = 9.3e-38
Identity = 84/223 (37.67%), Postives = 125/223 (56.05%), Query Frame = 1
Query: 40 FNPLLGALVDSVAPENGLFLYNQMLRHPSSHNHYTFTYALKACFLLHETHKGLEIHARLI 99
+N LL + P +F Y + + S + +TF KAC +G +IH +
Sbjct: 74 YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVT 133
Query: 100 KSGHLSDIFIQNSLLHFYIVDGDVPSASRVFDSIPDPDVVSWTSIISGLSKLGFKEEALG 159
K G DI++QNSL+HFY V G+ +A +VF +P DVVSWT II+G ++ G +EAL
Sbjct: 134 KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALD 193
Query: 160 KFLSMNVSPNSATLVSALSACSSLRCVKIGKAIHGLKLRSLNVESVSLDNALLDFYVRCG 219
F M+V PN AT V L + + C+ +GK IHGL L+ ++ S+ NAL+D YV+C
Sbjct: 194 TFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCE 253
Query: 220 SLRGAQNLFDEMPQRDVVSWTTLIGGYALTGLCEEAVRVFQNM 263
L A +F E+ ++D VSW ++I G +EA+ +F M
Sbjct: 254 QLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLM 296
BLAST of Cp4.1LG18g01750 vs. Swiss-Prot
Match:
PP284_ARATH (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1)
HSP 1 Score: 151.8 bits (382), Expect = 1.1e-35
Identity = 93/258 (36.05%), Postives = 141/258 (54.65%), Query Frame = 1
Query: 28 HAQLL-----TNPKPHVFNPLLGALVDSVAPENGLFLYNQMLRHPSSH-NHYTFTYALKA 87
HAQLL ++P +N L+ +S +P N + YN+ML S + +TF +ALK+
Sbjct: 57 HAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKS 116
Query: 88 CFLLHETHKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSASRVFDSIPDPDVVSW 147
C + K LEIH +I+SG L D + SL+ Y +G V AS+VFD +P D+VSW
Sbjct: 117 CERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSW 176
Query: 148 TSIISGLSKLGFKEEALGKFLSM---NVSPNSATLVSALSACSSLRCVKIGKAIHGLKLR 207
+I S +G +AL + M V +S TLV+ LS+C+ + + +G +H +
Sbjct: 177 NVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACD 236
Query: 208 SLNVESVSLDNALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGYALTGLCEEAVRV 267
V + NAL+D Y +CGSL A +F+ M +RDV++W ++I GY + G EA+
Sbjct: 237 IRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISF 296
Query: 268 FQNMVHAREAIPNEATLI 277
F+ MV A PN T +
Sbjct: 297 FRKMV-ASGVRPNAITFL 313
BLAST of Cp4.1LG18g01750 vs. Swiss-Prot
Match:
PP265_ARATH (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1)
HSP 1 Score: 151.0 bits (380), Expect = 1.9e-35
Identity = 96/249 (38.55%), Postives = 139/249 (55.82%), Query Frame = 1
Query: 38 HVFNPLLGALVDSVAPENGLFLYNQMLRHPSSHNHYTFTYALKACFL----LHETHKGLE 97
+V+N L AL + E L LY +M R + +T+TY LKAC ++ KG E
Sbjct: 144 YVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKE 203
Query: 98 IHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSASRVFDSIPDPDVVSWTSIISGLSKLGF 157
IHA L + G+ S ++I +L+ Y G V AS VF +P +VVSW+++I+ +K G
Sbjct: 204 IHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGK 263
Query: 158 KEEALGKFLSM-----NVSPNSATLVSALSACSSLRCVKIGKAIHGLKLRSLNVESVSLD 217
EAL F M + SPNS T+VS L AC+SL ++ GK IHG LR + +
Sbjct: 264 AFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI 323
Query: 218 NALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGYALTGLCEEAVRVFQNMVHAREA 277
+AL+ Y RCG L Q +FD M RDVVSW +LI Y + G ++A+++F+ M+ A A
Sbjct: 324 SALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEML-ANGA 383
BLAST of Cp4.1LG18g01750 vs. Swiss-Prot
Match:
PP182_ARATH (Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1)
HSP 1 Score: 150.6 bits (379), Expect = 2.5e-35
Identity = 92/290 (31.72%), Postives = 149/290 (51.38%), Query Frame = 1
Query: 1 MEQVH---------RSDSMPLRPPKLSISSAQLSQIHAQLLTNPKPH--VFNPLLGALVD 60
++QVH RS S+ + L+ S+ ++ H L+ P P +FN ++ +
Sbjct: 25 LQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSK 84
Query: 61 SVAPENGLFLYNQMLRHPSSHNHYTFTYALKACFLLHETHKGLEIHARLIKSGHLSDIFI 120
P + + Y +ML S ++YTFT +K+C L G +H + SG D ++
Sbjct: 85 LRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYV 144
Query: 121 QNSLLHFYIVDGDVPSASRVFDSIPDPDVVSWTSIISGLSKLGFKEEALGKFLSMNVS-- 180
Q +L+ FY GD+ A +VFD +P+ +V+W S++SG + G +EA+ F M S
Sbjct: 145 QAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGF 204
Query: 181 -PNSATLVSALSACSSLRCVKIGKAIHGLKLRSLNVESVSLDNALLDFYVRCGSLRGAQN 240
P+SAT VS LSAC+ V +G +H + +V L AL++ Y RCG + A+
Sbjct: 205 EPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKARE 264
Query: 241 LFDEMPQRDVVSWTTLIGGYALTGLCEEAVRVFQNMVHAREAIPNEATLI 277
+FD+M + +V +WT +I Y G ++AV +F M IPN T +
Sbjct: 265 VFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFV 314
BLAST of Cp4.1LG18g01750 vs. TrEMBL
Match:
A0A0A0LXJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G613550 PE=4 SV=1)
HSP 1 Score: 448.4 bits (1152), Expect = 6.6e-123
Identity = 217/268 (80.97%), Postives = 246/268 (91.79%), Query Frame = 1
Query: 10 MPLRPPKLSISSAQLSQIHAQLLTNPKPHVFNPLLGALVDSVAPENGLFLYNQMLRHPSS 69
MPL+P K SIS AQ +QIHA+LLTNPKPH+FNPLLG+LV+S+ PENGLFLYNQMLR+PSS
Sbjct: 1 MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS 60
Query: 70 HNHYTFTYALKACFLLHETHKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSASRV 129
HNH+TFTYALKAC LH+T KGLEIHA LIKSGHLSDIFIQNSLLHFYI+DGDV SAS +
Sbjct: 61 HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLI 120
Query: 130 FDSIPDPDVVSWTSIISGLSKLGFKEEALGKFLSMNVSPNSATLVSALSACSSLRCVKIG 189
FDSIPDPDVVSWTSIISGLSKLGF++EAL KFLSMNV PNS TLV+ALSACSSLRC+K+G
Sbjct: 121 FDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSACSSLRCLKLG 180
Query: 190 KAIHGLKLRSLNVESVSLDNALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGYALT 249
KAIHGL++R+LN E+V L+NALLDFYVRC LR A+NLF++MP+RDVVSWTT+IGGYA +
Sbjct: 181 KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS 240
Query: 250 GLCEEAVRVFQNMVHAREAIPNEATLIN 278
GLCEEAVRVFQNMVH EAIPNEATL+N
Sbjct: 241 GLCEEAVRVFQNMVHVGEAIPNEATLVN 268
BLAST of Cp4.1LG18g01750 vs. TrEMBL
Match:
V4S1T7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004743mg PE=4 SV=1)
HSP 1 Score: 319.3 bits (817), Expect = 4.6e-84
Identity = 161/266 (60.53%), Postives = 198/266 (74.44%), Query Frame = 1
Query: 12 LRPPKLSISSAQLSQIHAQLLTNPKPHVFNPLLGALVDSVAPENGLFLYNQMLRHPSSHN 71
L+ K ++S QL+QIHAQ++ P+PH+ N LL L S P+N + LYN+ML PSS+N
Sbjct: 6 LKSLKPTLSFKQLNQIHAQIIKIPQPHILNTLLKLLTQSSTPQNAIPLYNKMLNCPSSYN 65
Query: 72 HYTFTYALKACFLLHETHKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSASRVFD 131
HYTFT ALKAC L H KGLEIHA +IK GHL DIFIQNSLLHFY+ D+ SA ++F+
Sbjct: 66 HYTFTQALKACSLAHAHQKGLEIHAHVIKYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFN 125
Query: 132 SIPDPDVVSWTSIISGLSKLGFKEEALGKFLSMNVSPNSATLVSALSACSSLRCVKIGKA 191
S+ PDVV+WT+IISGLSK GF +EA+ F ++V PN+ TLVS LSACSSL K+GKA
Sbjct: 126 SVVFPDVVTWTTIISGLSKCGFHKEAIDMFCGIDVKPNANTLVSVLSACSSLGSRKLGKA 185
Query: 192 IHGLKLRSLNVESVSLDNALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGYALTGL 251
IH LR+LN ++ LDNA+L+FYVRCGSL LF +MP+RDVVSWTT+IGGYA G
Sbjct: 186 IHAHSLRNLNENNIILDNAVLEFYVRCGSLASCGYLFVKMPKRDVVSWTTMIGGYAERGF 245
Query: 252 CEEAVRVFQNMVHAREAIPNEATLIN 278
CEEAV VFQ M +EA PNEATL+N
Sbjct: 246 CEEAVSVFQEMEKTKEAEPNEATLVN 271
BLAST of Cp4.1LG18g01750 vs. TrEMBL
Match:
D7T1C2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g02370 PE=4 SV=1)
HSP 1 Score: 312.0 bits (798), Expect = 7.4e-82
Identity = 162/275 (58.91%), Postives = 204/275 (74.18%), Query Frame = 1
Query: 4 VHRSDSMPLRPPKLSISSAQLSQIHAQLL-TNPKPHVFNPLLGALVDSVAPENGLFLYNQ 63
+ S ++ L+ P + + QL+QIHA LL T+ P +FN LL S++P++ L LYNQ
Sbjct: 11 IFHSQAIKLKHPIPTCTLNQLNQIHAHLLKTHKPPLIFNTLL----PSLSPQDALLLYNQ 70
Query: 64 MLRHPSSHNHYTFTYALKACFLLHETHKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGD 123
M+ H +SHNH+TFT+AL A LH HK LEIHAR IKSGH SDIFIQN+LLH Y+V+ +
Sbjct: 71 MVLHRTSHNHFTFTHALIASSSLHALHKTLEIHARAIKSGHYSDIFIQNTLLHSYVVENN 130
Query: 124 VPSASRVFDSIPDPDVVSWTSIISGLSKLGFKEEALGKFLSMNVSPNSATLVSALSACSS 183
A VF SI PDVVSWTSIISGLSK GF EEA+G+FLSM+V PN++TLVS +SAC
Sbjct: 131 FVFAKSVFKSISSPDVVSWTSIISGLSKCGFDEEAIGEFLSMDVKPNTSTLVSVVSACCG 190
Query: 184 LRCVKIGKAIHGLKLRSLNVESVSLDNALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTL 243
LR V+ GKAIHG LRS++ +++ LDNALLDFYV+CG L A+ LF +M +RDV+SWTT+
Sbjct: 191 LRAVRFGKAIHGYSLRSMDGDNIILDNALLDFYVKCGYLVSAKYLFMKMFRRDVISWTTM 250
Query: 244 IGGYALTGLCEEAVRVFQNMVHAREAIPNEATLIN 278
+GG A GLCEEAV VFQ MV EA+PNE TL+N
Sbjct: 251 VGGLAQGGLCEEAVEVFQAMVKGGEAVPNEVTLVN 281
BLAST of Cp4.1LG18g01750 vs. TrEMBL
Match:
A0A118JZP7_CYNCS (Pentatricopeptide repeat-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021535 PE=4 SV=1)
HSP 1 Score: 290.8 bits (743), Expect = 1.8e-75
Identity = 141/268 (52.61%), Postives = 192/268 (71.64%), Query Frame = 1
Query: 10 MPLRPPKLSISSAQLSQIHAQLLTNPKPHVFNPLLGALVDSVAPENGLFLYNQMLRHPSS 69
MP +P +SS Q++QI A +L + +PH N LL + V S P++ LYNQML++P++
Sbjct: 1 MPKKPLLHVLSSKQVAQIKAHVLKSSRPHELNELLDSFVKSHTPQHAFVLYNQMLQNPNT 60
Query: 70 HNHYTFTYALKACFLLHETHKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSASRV 129
HNH++F YALKAC L + +KG EIHAR++KSGHL+ +IQNS +HFY++ D+ A+RV
Sbjct: 61 HNHFSFNYALKACCLTNSFNKGREIHARVVKSGHLAHTYIQNSFVHFYVIRNDIVYANRV 120
Query: 130 FDSIPDPDVVSWTSIISGLSKLGFKEEALGKFLSMNVSPNSATLVSALSACSSLRCVKIG 189
F +I P+VVSWTSIISG SK GF ++A+ F M+V PN+ TLVS LSACSS+R +K+G
Sbjct: 121 FRTIAYPNVVSWTSIISGFSKCGFVDDAVAMFSLMDVDPNANTLVSVLSACSSVRSLKLG 180
Query: 190 KAIHGLKLRSLNVESVSLDNALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGYALT 249
K++H L+S + +V DNALL FYV+ G L AQ LFDEMP+RDVVSW+T++GG+
Sbjct: 181 KSVHCYGLKSFDQGNVIFDNALLHFYVKVGDLENAQRLFDEMPKRDVVSWSTMVGGFVEW 240
Query: 250 GLCEEAVRVFQNMVHAREAIPNEATLIN 278
G CE A+ VF MV E PN AT++N
Sbjct: 241 GFCETAINVFNEMVKGGEVNPNVATIVN 268
BLAST of Cp4.1LG18g01750 vs. TrEMBL
Match:
K7MA51_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G073600 PE=4 SV=1)
HSP 1 Score: 280.8 bits (717), Expect = 1.8e-72
Identity = 146/254 (57.48%), Postives = 182/254 (71.65%), Query Frame = 1
Query: 30 QLLTNPKPHVFNPLLGALVDSVAPENGLF-LYNQMLRHPSSHNHYTFTYALKACFLLHET 89
QL+TNP P NPLL L +S +N F LYNQ+L HP SHNHYTFT+AL+AC+ H
Sbjct: 16 QLITNPNPQFLNPLLSQLTNS---QNAFFDLYNQILSHPFSHNHYTFTHALRACYSHHSR 75
Query: 90 HKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSASRVFDSIPDPDVVSWTSIISGL 149
K LEIHA L+KSGH D+F+QNSLLHFY+ DV SAS +F SIP PDVVSWTS++SGL
Sbjct: 76 SKALEIHAHLVKSGHYLDLFLQNSLLHFYLAHNDVVSASNLFRSIPSPDVVSWTSLVSGL 135
Query: 150 SKLGFKEEALGKFLSMN-----VSPNSATLVSALSACSSLRCVKIGKAIHGLKLRSLNVE 209
+K GF+ +AL F +MN V PN+ATLV+AL ACSSL + +GK+ H LR L +
Sbjct: 136 AKSGFEAQALHHFTNMNAKPKIVRPNAATLVAALCACSSLGALGLGKSAHAYGLRMLIFD 195
Query: 210 -SVSLDNALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGYALTGLCEEAVRVFQNM 269
+V DNA+L+ Y +CG+L+ AQNLFD++ RDVVSWTTL+ GYA G CEEA VF+ M
Sbjct: 196 GNVIFDNAVLELYAKCGALKNAQNLFDKVFARDVVSWTTLLMGYARGGYCEEAFAVFKRM 255
Query: 270 VHAREAIPNEATLI 277
V EA PNEAT++
Sbjct: 256 VLNAEAEPNEATVV 266
BLAST of Cp4.1LG18g01750 vs. TAIR10
Match:
AT4G21065.1 (AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 163.3 bits (412), Expect = 2.1e-40
Identity = 94/270 (34.81%), Postives = 149/270 (55.19%), Query Frame = 1
Query: 14 PPKLSISSAQLSQIHAQLLTNPKPHVFNPLLGALVDSVAPENGLFLYNQM----LRHPSS 73
PP +S + S+I + ++N L+ + + LY +M L P +
Sbjct: 66 PPPMSYAHKVFSKIEKPI----NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDT 125
Query: 74 HNHYTFTYALKACFLLHETHKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSASRV 133
H T+ + +KA + + G IH+ +I+SG S I++QNSLLH Y GDV SA +V
Sbjct: 126 H---TYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKV 185
Query: 134 FDSIPDPDVVSWTSIISGLSKLGFKEEALGKFLSMN---VSPNSATLVSALSACSSLRCV 193
FD +P+ D+V+W S+I+G ++ G EEAL + MN + P+ T+VS LSAC+ + +
Sbjct: 186 FDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGAL 245
Query: 194 KIGKAIHGLKLRSLNVESVSLDNALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGY 253
+GK +H ++ ++ N LLD Y RCG + A+ LFDEM ++ VSWT+LI G
Sbjct: 246 TLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGL 305
Query: 254 ALTGLCEEAVRVFQNMVHAREAIPNEATLI 277
A+ G +EA+ +F+ M +P E T +
Sbjct: 306 AVNGFGKEAIELFKYMESTEGLLPCEITFV 328
BLAST of Cp4.1LG18g01750 vs. TAIR10
Match:
AT4G38010.1 (AT4G38010.1 Pentatricopeptide repeat (PPR-like) superfamily protein)
HSP 1 Score: 158.7 bits (400), Expect = 5.3e-39
Identity = 84/223 (37.67%), Postives = 125/223 (56.05%), Query Frame = 1
Query: 40 FNPLLGALVDSVAPENGLFLYNQMLRHPSSHNHYTFTYALKACFLLHETHKGLEIHARLI 99
+N LL + P +F Y + + S + +TF KAC +G +IH +
Sbjct: 74 YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVT 133
Query: 100 KSGHLSDIFIQNSLLHFYIVDGDVPSASRVFDSIPDPDVVSWTSIISGLSKLGFKEEALG 159
K G DI++QNSL+HFY V G+ +A +VF +P DVVSWT II+G ++ G +EAL
Sbjct: 134 KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALD 193
Query: 160 KFLSMNVSPNSATLVSALSACSSLRCVKIGKAIHGLKLRSLNVESVSLDNALLDFYVRCG 219
F M+V PN AT V L + + C+ +GK IHGL L+ ++ S+ NAL+D YV+C
Sbjct: 194 TFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCE 253
Query: 220 SLRGAQNLFDEMPQRDVVSWTTLIGGYALTGLCEEAVRVFQNM 263
L A +F E+ ++D VSW ++I G +EA+ +F M
Sbjct: 254 QLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLM 296
BLAST of Cp4.1LG18g01750 vs. TAIR10
Match:
AT3G56550.1 (AT3G56550.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 151.8 bits (382), Expect = 6.4e-37
Identity = 93/258 (36.05%), Postives = 141/258 (54.65%), Query Frame = 1
Query: 28 HAQLL-----TNPKPHVFNPLLGALVDSVAPENGLFLYNQMLRHPSSH-NHYTFTYALKA 87
HAQLL ++P +N L+ +S +P N + YN+ML S + +TF +ALK+
Sbjct: 57 HAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKS 116
Query: 88 CFLLHETHKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSASRVFDSIPDPDVVSW 147
C + K LEIH +I+SG L D + SL+ Y +G V AS+VFD +P D+VSW
Sbjct: 117 CERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSW 176
Query: 148 TSIISGLSKLGFKEEALGKFLSM---NVSPNSATLVSALSACSSLRCVKIGKAIHGLKLR 207
+I S +G +AL + M V +S TLV+ LS+C+ + + +G +H +
Sbjct: 177 NVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACD 236
Query: 208 SLNVESVSLDNALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGYALTGLCEEAVRV 267
V + NAL+D Y +CGSL A +F+ M +RDV++W ++I GY + G EA+
Sbjct: 237 IRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISF 296
Query: 268 FQNMVHAREAIPNEATLI 277
F+ MV A PN T +
Sbjct: 297 FRKMV-ASGVRPNAITFL 313
BLAST of Cp4.1LG18g01750 vs. TAIR10
Match:
AT3G46790.1 (AT3G46790.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 151.0 bits (380), Expect = 1.1e-36
Identity = 96/249 (38.55%), Postives = 139/249 (55.82%), Query Frame = 1
Query: 38 HVFNPLLGALVDSVAPENGLFLYNQMLRHPSSHNHYTFTYALKACFL----LHETHKGLE 97
+V+N L AL + E L LY +M R + +T+TY LKAC ++ KG E
Sbjct: 144 YVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKE 203
Query: 98 IHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSASRVFDSIPDPDVVSWTSIISGLSKLGF 157
IHA L + G+ S ++I +L+ Y G V AS VF +P +VVSW+++I+ +K G
Sbjct: 204 IHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGK 263
Query: 158 KEEALGKFLSM-----NVSPNSATLVSALSACSSLRCVKIGKAIHGLKLRSLNVESVSLD 217
EAL F M + SPNS T+VS L AC+SL ++ GK IHG LR + +
Sbjct: 264 AFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI 323
Query: 218 NALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGYALTGLCEEAVRVFQNMVHAREA 277
+AL+ Y RCG L Q +FD M RDVVSW +LI Y + G ++A+++F+ M+ A A
Sbjct: 324 SALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEML-ANGA 383
BLAST of Cp4.1LG18g01750 vs. TAIR10
Match:
AT2G33760.1 (AT2G33760.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 150.6 bits (379), Expect = 1.4e-36
Identity = 92/290 (31.72%), Postives = 149/290 (51.38%), Query Frame = 1
Query: 1 MEQVH---------RSDSMPLRPPKLSISSAQLSQIHAQLLTNPKPH--VFNPLLGALVD 60
++QVH RS S+ + L+ S+ ++ H L+ P P +FN ++ +
Sbjct: 25 LQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSK 84
Query: 61 SVAPENGLFLYNQMLRHPSSHNHYTFTYALKACFLLHETHKGLEIHARLIKSGHLSDIFI 120
P + + Y +ML S ++YTFT +K+C L G +H + SG D ++
Sbjct: 85 LRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYV 144
Query: 121 QNSLLHFYIVDGDVPSASRVFDSIPDPDVVSWTSIISGLSKLGFKEEALGKFLSMNVS-- 180
Q +L+ FY GD+ A +VFD +P+ +V+W S++SG + G +EA+ F M S
Sbjct: 145 QAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGF 204
Query: 181 -PNSATLVSALSACSSLRCVKIGKAIHGLKLRSLNVESVSLDNALLDFYVRCGSLRGAQN 240
P+SAT VS LSAC+ V +G +H + +V L AL++ Y RCG + A+
Sbjct: 205 EPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKARE 264
Query: 241 LFDEMPQRDVVSWTTLIGGYALTGLCEEAVRVFQNMVHAREAIPNEATLI 277
+FD+M + +V +WT +I Y G ++AV +F M IPN T +
Sbjct: 265 VFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFV 314
BLAST of Cp4.1LG18g01750 vs. NCBI nr
Match:
gi|778663657|ref|XP_011660133.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like isoform X1 [Cucumis sativus])
HSP 1 Score: 448.4 bits (1152), Expect = 9.4e-123
Identity = 217/268 (80.97%), Postives = 246/268 (91.79%), Query Frame = 1
Query: 10 MPLRPPKLSISSAQLSQIHAQLLTNPKPHVFNPLLGALVDSVAPENGLFLYNQMLRHPSS 69
MPL+P K SIS AQ +QIHA+LLTNPKPH+FNPLLG+LV+S+ PENGLFLYNQMLR+PSS
Sbjct: 1 MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS 60
Query: 70 HNHYTFTYALKACFLLHETHKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSASRV 129
HNH+TFTYALKAC LH+T KGLEIHA LIKSGHLSDIFIQNSLLHFYI+DGDV SAS +
Sbjct: 61 HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLI 120
Query: 130 FDSIPDPDVVSWTSIISGLSKLGFKEEALGKFLSMNVSPNSATLVSALSACSSLRCVKIG 189
FDSIPDPDVVSWTSIISGLSKLGF++EAL KFLSMNV PNS TLV+ALSACSSLRC+K+G
Sbjct: 121 FDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSACSSLRCLKLG 180
Query: 190 KAIHGLKLRSLNVESVSLDNALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGYALT 249
KAIHGL++R+LN E+V L+NALLDFYVRC LR A+NLF++MP+RDVVSWTT+IGGYA +
Sbjct: 181 KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS 240
Query: 250 GLCEEAVRVFQNMVHAREAIPNEATLIN 278
GLCEEAVRVFQNMVH EAIPNEATL+N
Sbjct: 241 GLCEEAVRVFQNMVHVGEAIPNEATLVN 268
BLAST of Cp4.1LG18g01750 vs. NCBI nr
Match:
gi|659099095|ref|XP_008450427.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like isoform X1 [Cucumis melo])
HSP 1 Score: 440.3 bits (1131), Expect = 2.6e-120
Identity = 215/268 (80.22%), Postives = 245/268 (91.42%), Query Frame = 1
Query: 10 MPLRPPKLSISSAQLSQIHAQLLTNPKPHVFNPLLGALVDSVAPENGLFLYNQMLRHPSS 69
MPL+P K SIS AQ +QIHA+LLTNPKPH+FNPLLG+LV+S++PENGLFLYNQML +PSS
Sbjct: 1 MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSS 60
Query: 70 HNHYTFTYALKACFLLHETHKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSASRV 129
HNH+TFTYALKAC LH+T KGLEIHA LIKSGHLSDIFIQNSLLHFYI+ GDV SAS +
Sbjct: 61 HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILHGDVSSASLI 120
Query: 130 FDSIPDPDVVSWTSIISGLSKLGFKEEALGKFLSMNVSPNSATLVSALSACSSLRCVKIG 189
FDSIP+PDVVSWTSIISG SKLGF++EALGKFLSMNV PNS TLV+ALSACSSLR +K+G
Sbjct: 121 FDSIPNPDVVSWTSIISGFSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRRLKLG 180
Query: 190 KAIHGLKLRSLNVESVSLDNALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGYALT 249
KAIHGL+LR+LN E+VSL+NALLDFYVRC LR A+NLF++M +RDVVSWTT+IGGYA +
Sbjct: 181 KAIHGLRLRTLNEENVSLENALLDFYVRCAYLRSAENLFEKMHKRDVVSWTTMIGGYAQS 240
Query: 250 GLCEEAVRVFQNMVHAREAIPNEATLIN 278
GLCEEAVRVFQNMVHA EAIPNEATL+N
Sbjct: 241 GLCEEAVRVFQNMVHAGEAIPNEATLVN 268
BLAST of Cp4.1LG18g01750 vs. NCBI nr
Match:
gi|1009118481|ref|XP_015875883.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Ziziphus jujuba])
HSP 1 Score: 355.1 bits (910), Expect = 1.1e-94
Identity = 171/260 (65.77%), Postives = 207/260 (79.62%), Query Frame = 1
Query: 18 SISSAQLSQIHAQLLTNPKPHVFNPLLGALVDSVAPENGLFLYNQMLRHPSSHNHYTFTY 77
+++ +L+QIHAQL+ NPKPH+ NPLLG+L +S P+N L LYNQML HP+SHNHYTFT+
Sbjct: 10 NLTYRKLNQIHAQLIKNPKPHILNPLLGSLSNSPTPQNALLLYNQMLLHPTSHNHYTFTH 69
Query: 78 ALKACFLLHETHKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSASRVFDSIPDPD 137
ALKACF L KGLEIHA ++K GH SDIFIQNSLLHFY++ DV SA +VFDSI PD
Sbjct: 70 ALKACFSLPAHQKGLEIHAHVLKCGHYSDIFIQNSLLHFYVIVNDVVSACQVFDSISYPD 129
Query: 138 VVSWTSIISGLSKLGFKEEALGKFLSMNVSPNSATLVSALSACSSLRCVKIGKAIHGLKL 197
VVSWTSIISGLSK GF+EEA+ KF SM+V PNS TLVS +SACSSL K+GKAIHG +
Sbjct: 130 VVSWTSIISGLSKCGFEEEAIVKFSSMDVEPNSTTLVSVISACSSLGAFKLGKAIHGFSM 189
Query: 198 RSLNVESVSLDNALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGYALTGLCEEAVR 257
R L ++ LDNA+LDFYVRCGSL A+ +F+ MP+RDVVSWTT++GGYA G CEEAVR
Sbjct: 190 RKLCQTNIVLDNAMLDFYVRCGSLVNARYIFENMPKRDVVSWTTIVGGYAHRGFCEEAVR 249
Query: 258 VFQNMVHAREAIPNEATLIN 278
+F M+ EA PNEAT++N
Sbjct: 250 LFNEMIRGGEAEPNEATIVN 269
BLAST of Cp4.1LG18g01750 vs. NCBI nr
Match:
gi|645241558|ref|XP_008227134.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Prunus mume])
HSP 1 Score: 348.6 bits (893), Expect = 1.0e-92
Identity = 165/254 (64.96%), Postives = 201/254 (79.13%), Query Frame = 1
Query: 24 LSQIHAQLLTNPKPHVFNPLLGALVDSVAPENGLFLYNQMLRHPSSHNHYTFTYALKACF 83
L+QIHA L+ NPKP + NPLLG L +S P+N FLYNQML HP+SHNHYTFTYALKAC
Sbjct: 5 LNQIHALLIKNPKPQLLNPLLGHLTNSPTPQNAFFLYNQMLHHPTSHNHYTFTYALKACC 64
Query: 84 LLHETHKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSASRVFDSIPDPDVVSWTS 143
LLH +K EIHA ++KSGH SD FIQNS+LHFY++ D+ SA+RVFDSIP PDVVSWTS
Sbjct: 65 LLHARNKAQEIHAHVLKSGHFSDTFIQNSMLHFYLIQSDIVSATRVFDSIPLPDVVSWTS 124
Query: 144 IISGLSKLGFKEEALGKFLSMNVSPNSATLVSALSACSSLRCVKIGKAIHGLKLRSLNVE 203
+ISGL+K GF EEA+ KF+SM++ PN ATLV +SACSSL K GKA+HG LR+L
Sbjct: 125 MISGLAKCGFVEEAILKFMSMDMEPNYATLVIVMSACSSLGAFKFGKAVHGYCLRNLRAR 184
Query: 204 SVSLDNALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGYALTGLCEEAVRVFQNMV 263
++ LDNA+LDFY+RCGSL A+ LF MP+RDV SWT+++GGYA G CEEAVR+FQ MV
Sbjct: 185 NIILDNAVLDFYLRCGSLESARYLFVNMPKRDVYSWTSVVGGYAQRGFCEEAVRLFQQMV 244
Query: 264 HAREAIPNEATLIN 278
EA+PNEAT++N
Sbjct: 245 QRGEAVPNEATIVN 258
BLAST of Cp4.1LG18g01750 vs. NCBI nr
Match:
gi|764587359|ref|XP_011464772.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Fragaria vesca subsp. vesca])
HSP 1 Score: 346.7 bits (888), Expect = 3.9e-92
Identity = 165/255 (64.71%), Postives = 203/255 (79.61%), Query Frame = 1
Query: 23 QLSQIHAQLLTNPKPHVFNPLLGALVDSVAPENGLFLYNQMLRHPSSHNHYTFTYALKAC 82
+L+QIHA L+ NPKP V NP LG L +S AP+N L LYNQML HP+SHNHYTFTYALKAC
Sbjct: 3 KLNQIHALLIKNPKPQVLNPWLGFLTNSSAPQNALLLYNQMLHHPTSHNHYTFTYALKAC 62
Query: 83 FLLHETHKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSASRVFDSIPDPDVVSWT 142
LLH HKG EI A + KSGH+SD FIQNSLLHFY++ D+ SA+ VFDSIP PDVVSWT
Sbjct: 63 CLLHSPHKGQEIQAHVTKSGHISDTFIQNSLLHFYVIQSDIVSAAHVFDSIPLPDVVSWT 122
Query: 143 SIISGLSKLGFKEEALGKFLSMNVSPNSATLVSALSACSSLRCVKIGKAIHGLKLRSLNV 202
S+ISGL+K GF +EA+ KF+SM+V PN TLV+ LS+CS+LR VK GKA+HG LR+ +
Sbjct: 123 SMISGLAKCGFVDEAIVKFVSMDVKPNPTTLVTVLSSCSTLRAVKFGKAVHGHCLRNFHE 182
Query: 203 ESVSLDNALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGYALTGLCEEAVRVFQNM 262
++ LDNA+LDFY+RCGSL A+ LF MP+RDV+SWT+++GGYA G CEEAV++FQ M
Sbjct: 183 SNLILDNAVLDFYLRCGSLASARYLFVNMPKRDVISWTSMVGGYAQRGFCEEAVKLFQQM 242
Query: 263 VHAREAIPNEATLIN 278
V EA PNEAT++N
Sbjct: 243 VLGGEAEPNEATIVN 257
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP330_ARATH | 3.8e-39 | 34.81 | Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN... | [more] |
| PP355_ARATH | 9.3e-38 | 37.67 | Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana GN... | [more] |
| PP284_ARATH | 1.1e-35 | 36.05 | Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana GN... | [more] |
| PP265_ARATH | 1.9e-35 | 38.55 | Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... | [more] |
| PP182_ARATH | 2.5e-35 | 31.72 | Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LXJ1_CUCSA | 6.6e-123 | 80.97 | Uncharacterized protein OS=Cucumis sativus GN=Csa_1G613550 PE=4 SV=1 | [more] |
| V4S1T7_9ROSI | 4.6e-84 | 60.53 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004743mg PE=4 SV=1 | [more] |
| D7T1C2_VITVI | 7.4e-82 | 58.91 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g02370 PE=4 SV=... | [more] |
| A0A118JZP7_CYNCS | 1.8e-75 | 52.61 | Pentatricopeptide repeat-containing protein OS=Cynara cardunculus var. scolymus ... | [more] |
| K7MA51_SOYBN | 1.8e-72 | 57.48 | Uncharacterized protein OS=Glycine max GN=GLYMA_15G073600 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G21065.1 | 2.1e-40 | 34.81 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G38010.1 | 5.3e-39 | 37.67 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT3G56550.1 | 6.4e-37 | 36.05 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G46790.1 | 1.1e-36 | 38.55 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G33760.1 | 1.4e-36 | 31.72 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
