Cp4.1LG18g01550 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG18g01550
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLysine-specific demethylase 8
LocationCp4.1LG18 : 3189885 .. 3194333 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGCTCAGCTCAGTTCAGTTCAGTTCAGTTCAATTCCGTTCTTCTTCTTCTTCTTCGATTCTGCAACAGCGACCCTTTTTCTGTTGATCAACCATGTCTTCATCGGAATCTAAACAAACCCCTTCATCCTACCATTTCGAAACCCCTCTTCTCGACGCCCAACACCCCTCCTTGCTCCACTCAATCTCCGACCAAGGTGGCTACGCCTTCGTCACCATGGCGGCTCTCGCAGCTGCCGGAGACTCATGCGCTGCCGAAACCGCCGCCGATATGGCCTGGGAGCAACTTCACTCTGGCCCCTCATCCTCTGTTCTCCCAATCTGGCGTGATGCCTACTCCATGGCTTGCCTTTACTTGGCGAGGCTCCATTTTGCTGGCGGAGAGTTTAAGGAGGCTCTAAGGGTTTTGGATATGGGTCTGATCATGGGTGGTTCGCGTTTGAGGAGTGATTTGGATTCTGCCATTGCTAAGGTCTCTGCTGAGGCCAGGATTGTTAGGGTTTTGGATGTTGCGGCGGAGGATGGTCTAATGGAGAGCTCGTTGGGTTGTGATGAGTGTAATAAAGAGGTGAGATTCTTTCATCATATAATCCATGTTTCCAATTCAACTCCAAAAGATGTTCTAAATGTTGTCCACTTTCTGCATAAGCTCGGCTTTCCCAAAAGGCCTCATATCAATGAAGAGAGTACTATTTGATTATAAACCCATAATCATTCATCCCACACTAACAATGGGTTCCTTTGACACATAGGTTGCTTGGGATTTGCCTGTAAAGTCTCTTACTAATAAGATGGTTGTGAAGATGTCTGGTTTATCTCTGGAGGGATTCTTGCGTGAATATTTCCAACCAGGTTTCCCTGTTATTGTTAGTGATGGTATGGCGCATTGGCCTGCTAGGACGAAGTGGAAGAGCTTGGATTACTTACATAGGGTTGCTGGTGATCGGACAATTCCTGTTGAGGTGATTTCTTTATCTGTTTGTTTGTTTATTATCGTTATCCGTATGTTGGATAGTATTGGATTGTGAGATTCTACGTGGATTGGAGAGGAAACGTCTCCTTACCGGATGTGTTTTAAAACCTAAACTCGGAAGGGAAAGCCCAAAGAGGACAATATTTACTAGCGGTGGGCTTGGCTGTTACAAATAGTATTAGAGCTAGACACTGGGCGGTTTGCTAGCGTGGACGCTGGCCTCCCAAAGGGGTGGATCATGAGATCCCACATTGGTTGGAGAGGAGAACGAAGCATTGCTTATAAGGGTGTGGAAAGCTCTCCCTACCATACACGTTTTAAAATTTGAGGGAAAGTTCGTAGGGGAAAGCCCAAAAAAACAATATGTGCTAGCGGTGGGCTTAGGCTGTTACAAATGGTATCAGAGCTAGACATCGGACGGTGTGCTAGCGAGGAAGTTGAGCCCTAAGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGAGAACGATGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTACCAAACATGTTTTAGAACTTTAAGGAGAAACCTGCAAGGGAAAGCCCAAATAGGGCAATATCTACTAGCAGTGAACTTGGGCCGTTACAAATGGTATTAGAGCCAAACACCAGGCGCGCTGTGTCAGTGAGGACACTGGGCCCCCAAGGGGGTGGATTGTGAGATCCCACATAAGTCGGAGAGGAGAACGAAACATTGCTTATAAGGGTGTGGAAACCTCTCACTCTACCATACGCTTTTTAAAACTTCGAGGGGAATCCCGAAAGGAAAAACCCAAAGAGGACAATATCTGCTAGCGGTGGACTTGAGCTGTTTCAAATGGTATCAGATCCAAACACCGGGCGGTGTGCCAGCGAGGATGCTGAGCTCCCAAGAAAGTGGATTATGAGATCTCATAAGGGTGTGGAAACCTCTCTATCAAACGCGTTTTAAAACCTTGAGAGGAAGCCTATCATTTGATTTGTATCCAAAATTGTGGATTAAGGTTTTTTTGAGACAATTCCACTGAAGTTGGTTGTTACTAGAATCACACATATAGAAGTTCTTTCTTGTTGTTCATCTATGTTTGTCATTGTTTGTTTGTATTGTAGCTTAACTCCTGCTGTCTCCTGCTGACTTGATATTGGAACTCAATAGATTTTCCACCTCTGAACTGAAGACTTGTAAAGCTTTGATGCTTTTCAGGTTGGGAACAACTATTTACGCCCACAATGGAAACAACAGTTCATTACATTTTCCCAATTTCTTGACAGGATTCAGTCCAATGATCCTTCTCATCATATCACATACCTTGCTCACCATCCATTATTTGACCAGGCATGTACCATTTTATACTCTGTATATGTATCCATGCATGTTTGTGCGTGTTATTCAGTACTTTCCTTTCTTCAAAGACAGATAAATGAGCTTCGGGACGACATTTGTGTTCCTGATTATTGTTCTGTCGGTGGTGGGGAGCTAAGGTCTCTTAATGCTTGGTTTGGACCAGCTGGGATAGTTACGCCTTTACACCGTGATCCTCATCACAACATGGTAGCTCAGGTTTGTACTTTTTGTGAGATTCCATATCGGTTGGAGAGAAGAATGAAACGTTTCTTATAAGGGTGTAGAAACCTCTCCCTACCAGACGCGTTTTACCTTGAGGGGAAGCTTGAATGGGAAAGCCCAAAGAGAATAATATCTGCTAACAGTGAGCTTGGACTGTTACAAATGGTATTAGAGCCAGACACTGTGCGGTGTGCCAGCGAGAACGTTGGGCTTCCAAGGGGGGTGAATTGTGAATGTCGGTTGGAGAGGAGAATGAAATATTCCTTGTAAGAGTGTGGAAACCTCTCTCTAGCAGACGCGTTTTAAAATTTTGAGGAGAAGCTCAGTAGGGAAAGCCCAAAAATGGCAATATCTGCTAGCTATGGACTCGCGCTGTTACAAATGGTGTCAAAACCAGACACCAGGCGATGTGTCAGCGAGGACGCTGGGCTCCCAAGGAGGGTGAATTGTGAGATCCTACATCGGTTGGAGAGGAGAACGAAACATTCCTTATAAGAGTATGGAAACCTCTCCCTAGCATACGCGTTTTAAAACTAGAAGGGGGAGTCTGAGAGGGAAAGCCTAAAAAGGACAATATCGGCTAGTGGTGGGCTTGGGTTGTTACAAATGGTATCAATACAAAACACCGGGCTATGTGCCAGCGAGGACGCTGGGTCCACAAGGGAGGTGGATTATGAGATCTCATGTCAGTTGGAGAGGAGAACGAAACAATCCTTATAAGGGTGTGGAAACTCTCTCTAGCATACGCATTTTAAAACTTTGAGGGGGAGTCCGAAAGGGAAAGTCCAAAAGGACAAAATTTGCTAGCGGTGGGCTTGGGTTGTTACAAATGGTATCAAAGCCAGACTCTGGGCGGTGTGTCAGCGAGGACGCTGGGCCCCCAAAGGAGGTGGATTGTGAGATCCTACATCGATTGGAGAAGAGAACAAAACATTGTTTATAATAGTGTGGAAACTTCTCCCTAACATACGCGTTTTAAAATCTTGAGGGTAGTCCGAAAGAAAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGAGACTGTTACACTTTTAGACCATTTTTCAACCAAGAAACTGTGGTTAGTCGAATACTTTTGATACTAAGCTAATCTCCCATCTCTTCATGCACAGGTTTTAGGCAAAAAGTACATTAGGCTATACGATGCGTCGTTATCCGAAGAACTTTACCCGTATAACACTGAAACTATGCTTTGCAATTCCAGCCAGGTAAACCAATCTGATAAGACAAACGTTTATGTTTTTAGCTTTTACAACGACGAACAGATCGATTCGTGCTCACAGTATAAGTCTTACTTTGAAGGTCGATCTCGACAACATCGACGAGAAAGAGTTTGGAAAGGTGGTGGACTTGGAATTTGTGGACTGCATTCTAGAGGAAGGGGAGATGCTTTATATCCCACCAAAATGGTGGCACTATGGTCGATCCTTAACCACTAGCTTTAGTGTTAGCTTTTGGTGGAACAATTGTGATGAAAATTCAAGTGCTTCCTGATATTAAATTAAAATGCCATTTTGTTCTTCATTGTTAGCCTCTAATCATATGATATTATACCCACATAAGATGGTGCCTTTGATACCTAGGACAGGTTTGTAACAGTGTCAGTGTAGATAATGTATTGATCAATGTGCTTTTGAAAGCCCTTGTTCTTGATGCAATTGATACCGTTTTGGCCTCAATTAGTTGTGACTGTTCATAATTTTTGGGATGCAGATGGCTATCAATGACCCAAAAACGCTAACAAAGTGAGTTTAAATTCATTGTCCTAGCTAGATTAACTCAAAGCCCGGCCTCTCCCTCGTTGATCGATCGTTTGATCGCTATTGACTTTGTCTATTCGTAGTTGTTCTGTCACATCTCTTTGTTCATCTGTCGTATGTCTGA

mRNA sequence

CAGCTCAGCTCAGTTCAGTTCAGTTCAGTTCAATTCCGTTCTTCTTCTTCTTCTTCGATTCTGCAACAGCGACCCTTTTTCTGTTGATCAACCATGTCTTCATCGGAATCTAAACAAACCCCTTCATCCTACCATTTCGAAACCCCTCTTCTCGACGCCCAACACCCCTCCTTGCTCCACTCAATCTCCGACCAAGGTGGCTACGCCTTCGTCACCATGGCGGCTCTCGCAGCTGCCGGAGACTCATGCGCTGCCGAAACCGCCGCCGATATGGCCTGGGAGCAACTTCACTCTGGCCCCTCATCCTCTGTTCTCCCAATCTGGCGTGATGCCTACTCCATGGCTTGCCTTTACTTGGCGAGGCTCCATTTTGCTGGCGGAGAGTTTAAGGAGGCTCTAAGGGTTTTGGATATGGGTCTGATCATGGGTGGTTCGCGTTTGAGGAGTGATTTGGATTCTGCCATTGCTAAGGTCTCTGCTGAGGCCAGGATTGTTAGGGTTTTGGATGTTGCGGCGGAGGATGGTCTAATGGAGAGCTCGTTGGGTTGTGATGAGTGTAATAAAGAGATGTCTGGTTTATCTCTGGAGGGATTCTTGCGTGAATATTTCCAACCAGGTTTCCCTGTTATTGTTAGTGATGGTATGGCGCATTGGCCTGCTAGGACGAAGTGGAAGAGCTTGGATTACTTACATAGGGTTGCTGGTGATCGGACAATTCCTGTTGAGACTTGTAAAGCTTTGATGCTTTTCAGGTTGGGAACAACTATTTACGCCCACAATGGAAACAACAGTTCATTACATTTTCCCAATTTCTTGACAGGATTCAGTCCAATGATCCTTCTCATCATATCACATACCTTGCTCACCATCCATTATTTGACCAGGCATGTTTTAGGCAAAAAGTACATTAGGCTATACGATGCGTCGTTATCCGAAGAACTTTACCCGTATAACACTGAAACTATGCTTTGCAATTCCAGCCAGGTCGATCTCGACAACATCGACGAGAAAGAGTTTGGAAAGGTGGTGGACTTGGAATTTGTGGACTGCATTCTAGAGGAAGGGGAGATGCTTTATATCCCACCAAAATGGTGGCACTATGGTCGATCCTTAACCACTAGCTTTAGTGTTAGCTTTTGGTGGAACAATTGTGATGAAAATTCAAGTGCTTCCTGATATTAAATTAAAATGCCATTTTGTTCTTCATTGTTAGCCTCTAATCATATGATATTATACCCACATAAGATGGTGCCTTTGATACCTAGGACAGGTTTGTAACAGTGTCAGTGTAGATAATGTATTGATCAATGTGCTTTTGAAAGCCCTTGTTCTTGATGCAATTGATACCGTTTTGGCCTCAATTAGTTGTGACTGTTCATAATTTTTGGGATGCAGATGGCTATCAATGACCCAAAAACGCTAACAAAGTGAGTTTAAATTCATTGTCCTAGCTAGATTAACTCAAAGCCCGGCCTCTCCCTCGTTGATCGATCGTTTGATCGCTATTGACTTTGTCTATTCGTAGTTGTTCTGTCACATCTCTTTGTTCATCTGTCGTATGTCTGA

Coding sequence (CDS)

ATGTCTTCATCGGAATCTAAACAAACCCCTTCATCCTACCATTTCGAAACCCCTCTTCTCGACGCCCAACACCCCTCCTTGCTCCACTCAATCTCCGACCAAGGTGGCTACGCCTTCGTCACCATGGCGGCTCTCGCAGCTGCCGGAGACTCATGCGCTGCCGAAACCGCCGCCGATATGGCCTGGGAGCAACTTCACTCTGGCCCCTCATCCTCTGTTCTCCCAATCTGGCGTGATGCCTACTCCATGGCTTGCCTTTACTTGGCGAGGCTCCATTTTGCTGGCGGAGAGTTTAAGGAGGCTCTAAGGGTTTTGGATATGGGTCTGATCATGGGTGGTTCGCGTTTGAGGAGTGATTTGGATTCTGCCATTGCTAAGGTCTCTGCTGAGGCCAGGATTGTTAGGGTTTTGGATGTTGCGGCGGAGGATGGTCTAATGGAGAGCTCGTTGGGTTGTGATGAGTGTAATAAAGAGATGTCTGGTTTATCTCTGGAGGGATTCTTGCGTGAATATTTCCAACCAGGTTTCCCTGTTATTGTTAGTGATGGTATGGCGCATTGGCCTGCTAGGACGAAGTGGAAGAGCTTGGATTACTTACATAGGGTTGCTGGTGATCGGACAATTCCTGTTGAGACTTGTAAAGCTTTGATGCTTTTCAGGTTGGGAACAACTATTTACGCCCACAATGGAAACAACAGTTCATTACATTTTCCCAATTTCTTGACAGGATTCAGTCCAATGATCCTTCTCATCATATCACATACCTTGCTCACCATCCATTATTTGACCAGGCATGTTTTAGGCAAAAAGTACATTAGGCTATACGATGCGTCGTTATCCGAAGAACTTTACCCGTATAACACTGAAACTATGCTTTGCAATTCCAGCCAGGTCGATCTCGACAACATCGACGAGAAAGAGTTTGGAAAGGTGGTGGACTTGGAATTTGTGGACTGCATTCTAGAGGAAGGGGAGATGCTTTATATCCCACCAAAATGGTGGCACTATGGTCGATCCTTAACCACTAGCTTTAGTGTTAGCTTTTGGTGGAACAATTGTGATGAAAATTCAAGTGCTTCCTGA

Protein sequence

MSSSESKQTPSSYHFETPLLDAQHPSLLHSISDQGGYAFVTMAALAAAGDSCAAETAADMAWEQLHSGPSSSVLPIWRDAYSMACLYLARLHFAGGEFKEALRVLDMGLIMGGSRLRSDLDSAIAKVSAEARIVRVLDVAAEDGLMESSLGCDECNKEMSGLSLEGFLREYFQPGFPVIVSDGMAHWPARTKWKSLDYLHRVAGDRTIPVETCKALMLFRLGTTIYAHNGNNSSLHFPNFLTGFSPMILLIISHTLLTIHYLTRHVLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKVVDLEFVDCILEEGEMLYIPPKWWHYGRSLTTSFSVSFWWNNCDENSSAS
Homology
[Close]
BLAST of Cp4.1LG18g01550 vs. Swiss-Prot
Match: JMJ30_ARATH (Lysine-specific demethylase JMJ30 OS=Arabidopsis thaliana GN=JMJ30 PE=1 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.9e-36
Identity = 82/143 (57.34%), Postives = 103/143 (72.03%), Query Frame = 1 

Query: 2   SSSESKQTPSSYHFETPLLDAQHPSLLHSISDQGGYAFVTMAALAAAGDSCAAETAADMA 61
           +++ S    ++    TP LDA+  +LL SIS +GGYA+  MA LA AGD  AAE A DMA
Sbjct: 4   ATTASSGDHNNLRLPTPTLDAESQTLLQSISAEGGYAYARMAVLAVAGDQSAAEAARDMA 63

Query: 62  WEQLHSGPSSSVLPIWRDAYSMACLYLARLHFAGGEFKEALRVLDMGLIMGGSRLRSDLD 121
           WEQLHSGP  SVLP+WRDAYSMACL++A++HFA GEF EAL  LDMGLIMGG  LR DL 
Sbjct: 64  WEQLHSGPWHSVLPVWRDAYSMACLHVAKIHFAAGEFGEALGALDMGLIMGGMLLRKDLH 123

Query: 122 SAIAKVSAEAR-IVRVLDVAAED 144
            ++  VS+EAR + + L+ A+ D
Sbjct: 124 DSVLLVSSEARKMTKSLEEASGD 146

[Close]
BLAST of Cp4.1LG18g01550 vs. Swiss-Prot
Match: KDM8_RAT (Lysine-specific demethylase 8 OS=Rattus norvegicus GN=Kdm8 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.1e-19
Identity = 47/86 (54.65%), Postives = 62/86 (72.09%), Query Frame = 1 

Query: 266 VLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKVVDLEFVDCILEEGE 325
           VLG+KYIRLY    SE +YP+ T  +L N+SQVD++N D ++F K  +  F+ CIL  G+
Sbjct: 330 VLGRKYIRLYSPQESEAVYPHETH-ILHNTSQVDVENPDLEKFPKFTEAPFLSCILSPGD 389

Query: 326 MLYIPPKWWHYGRSLTTSFSVSFWWN 352
            L+IP K+WHY RSL  SFSVSFWW+
Sbjct: 390 TLFIPAKYWHYVRSLDLSFSVSFWWS 414

[Close]
BLAST of Cp4.1LG18g01550 vs. Swiss-Prot
Match: KDM8_MOUSE (Lysine-specific demethylase 8 OS=Mus musculus GN=Kdm8 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.1e-19
Identity = 47/86 (54.65%), Postives = 62/86 (72.09%), Query Frame = 1 

Query: 266 VLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKVVDLEFVDCILEEGE 325
           VLG+KYIRLY    SE +YP+ T  +L N+SQVD++N D ++F K  +  F+ CIL  G+
Sbjct: 330 VLGRKYIRLYSPQESEAVYPHETH-ILHNTSQVDVENPDLEKFPKFTEAPFLSCILSPGD 389

Query: 326 MLYIPPKWWHYGRSLTTSFSVSFWWN 352
            L+IP K+WHY RSL  SFSVSFWW+
Sbjct: 390 TLFIPAKYWHYVRSLDLSFSVSFWWS 414

[Close]
BLAST of Cp4.1LG18g01550 vs. Swiss-Prot
Match: KDM8_BOVIN (Lysine-specific demethylase 8 OS=Bos taurus GN=KDM8 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.3e-19
Identity = 45/86 (52.33%), Postives = 63/86 (73.26%), Query Frame = 1 

Query: 266 VLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKVVDLEFVDCILEEGE 325
           V+G+KYIRLY    SE LYP++T  +L N+SQVD++N D ++F +  +  F+ C+L  GE
Sbjct: 322 VMGRKYIRLYSPQESEALYPHDTH-LLHNTSQVDVENPDLEKFPRFAEAPFLSCVLSPGE 381

Query: 326 MLYIPPKWWHYGRSLTTSFSVSFWWN 352
           +L+IP K WHY R+L  SFSVSFWW+
Sbjct: 382 VLFIPVKHWHYVRALDLSFSVSFWWS 406

[Close]
BLAST of Cp4.1LG18g01550 vs. Swiss-Prot
Match: KDM8_HUMAN (Lysine-specific demethylase 8 OS=Homo sapiens GN=KDM8 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 5.6e-19
Identity = 46/86 (53.49%), Postives = 62/86 (72.09%), Query Frame = 1 

Query: 266 VLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKVVDLEFVDCILEEGE 325
           V+G+KYIRLY    S  LYP++T  +L N+SQVD++N D ++F K     F+ CIL  GE
Sbjct: 332 VMGRKYIRLYSPQESGALYPHDTH-LLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGE 391

Query: 326 MLYIPPKWWHYGRSLTTSFSVSFWWN 352
           +L+IP K+WHY R+L  SFSVSFWW+
Sbjct: 392 ILFIPVKYWHYVRALDLSFSVSFWWS 416

[Close]
BLAST of Cp4.1LG18g01550 vs. TrEMBL
Match: A0A166GV34_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_002041 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 2.0e-92
Identity = 198/369 (53.66%), Postives = 240/369 (65.04%), Query Frame = 1 

Query: 15  FETPLLDAQHPSLLHSISDQGGYAFVTMAALAAAGDSCAAETAADMAWEQLHSGPSSSVL 74
           FE+PLL +  PSLLH IS+ GGYA+V+M  L A GD  AAE A +MAWEQLHSGP +SVL
Sbjct: 10  FESPLLASHSPSLLHQISEHGGYAYVSMYTLGAGGDHRAAEAAREMAWEQLHSGPWNSVL 69

Query: 75  PIWRDAYSMACLYLARLHFAGGEFKEALRVLDMGLIMGGSRLRSDLDSAIAKVSAEARIV 134
           P+WRDAYSMACL +A+   A GE+KEALRVLD+G+IMGG  LR DLD AIA   A+    
Sbjct: 70  PVWRDAYSMACLLVAKHCCAVGEYKEALRVLDLGVIMGGLTLRKDLDDAIAITKAKESGA 129

Query: 135 ----------RVLDVAAEDGLME-------SSLGCDECNKEMSGLSLEGFLREYFQPGFP 194
                     RVL V AE  L E        SL C    K  + LSLE FLR+YF    P
Sbjct: 130 CSISEGNEGKRVL-VDAEFNLKEMLQLLPKQSLSCKLVGKRPA-LSLEAFLRDYFLSASP 189

Query: 195 VIVSDGMAHWPARTKWKSLDYLHRVAGDRTIPVETCKALM-------LFRLGTTIYAHNG 254
           VI+SD M HWPAR KW  ++YL +VAG RT+PVE  K  +       L      +     
Sbjct: 190 VILSDCMVHWPARVKWNDINYLKKVAGSRTVPVEVGKNYLCTEWKQELITFSEFLERIQT 249

Query: 255 NNSSLHFPNFLTGFSPMILLIISHTLLTIHY--LTRHVLGKKYIRLYDASLSEELYPYNT 314
           N+S+   P +L          IS  +  + Y  L   ++GKKY+RLY ASLSEEL P++ 
Sbjct: 250 NDSTSSVPTYLAQHPLFDQACISSDVYKLLYRILAVPIVGKKYVRLYPASLSEELCPHS- 309

Query: 315 ETMLCNSSQVDLDNIDEKEFGKVVDLEFVDCILEEGEMLYIPPKWWHYGRSLTTSFSVSF 358
           E+MLCNSSQVDLDNIDEK+F  + +LEF+DCILEEGEMLYIPPKWWHY RSLTTSFSVSF
Sbjct: 310 ESMLCNSSQVDLDNIDEKQFPNIQNLEFMDCILEEGEMLYIPPKWWHYVRSLTTSFSVSF 369

[Close]
BLAST of Cp4.1LG18g01550 vs. TrEMBL
Match: A0A118JTI3_CYNCS (JmjC domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_007167 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.0e-91
Identity = 194/358 (54.19%), Postives = 233/358 (65.08%), Query Frame = 1 

Query: 15  FETPLLDAQHPSLLHSISDQGGYAFVTMAALAAAGDSCAAETAADMAWEQLHSGPSSSVL 74
           F TP+LD Q  SLL SIS++GGYA+V+M+  AAAGD  AAE A +MAWEQLHSGP  SVL
Sbjct: 10  FGTPVLDDQAHSLLQSISEEGGYAYVSMSTRAAAGDIRAAEAAREMAWEQLHSGPWHSVL 69

Query: 75  PIWRDAYSMACLYLARLHFAGGEFKEALRVLDMGLIMGGSRLRSDLDSAIAKVSAEAR-I 134
           P+WRDAYSMACL++A+ H+A G+F+EALRVLDMGLIMGG  LR DLDSA+ K +  A  +
Sbjct: 70  PVWRDAYSMACLHVAKFHYANGDFREALRVLDMGLIMGGMVLRKDLDSAVEKATERANAL 129

Query: 135 VRVLDVAAE--------------------DGLMESSLGCDECNKEMSGLSLEGFLREYFQ 194
           +RV + +                        L + SL C    K  S LSLEGF+R+YF 
Sbjct: 130 LRVSEESVNGSANAKLLTNQNAINLMEVVQSLPKRSLSCKLVGKR-SALSLEGFMRDYFL 189

Query: 195 PGFPVIVSDGMAHWPARTKWKSLDYLHRVAGDRTIPVETCKALMLFRLGTTIYAHNGNNS 254
            G PV++SD M HWPARTKW  L+YL +VAG RT+PVE  K                N  
Sbjct: 190 SGSPVLLSDSMTHWPARTKWNDLNYLKKVAGYRTVPVEVGK----------------NYL 249

Query: 255 SLHFPNFLTGFSPMILLIISHTLLTIHYLTRHVLGKKYIRLYDASLSEELYPYNTETMLC 314
              +   +  FS  +  I S +     YL +H L      LY ASLSEELYP+ +E+ML 
Sbjct: 250 CTDWKQEMLTFSEFLERIQSKSSAAPTYLAQHPL------LYPASLSEELYPH-SESMLK 309

Query: 315 NSSQVDLDNIDEKEFGKVVDLEFVDCILEEGEMLYIPPKWWHYGRSLTTSFSVSFWWN 352
           NSSQVDLDN+D  EF K+ DLEFVDCILEEGEMLYIPPKWWHY RSLTTS SVSFWW+
Sbjct: 310 NSSQVDLDNMDANEFPKIQDLEFVDCILEEGEMLYIPPKWWHYVRSLTTSLSVSFWWS 343

[Close]
BLAST of Cp4.1LG18g01550 vs. TrEMBL
Match: K4ASN4_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.9e-90
Identity = 185/376 (49.20%), Postives = 246/376 (65.43%), Query Frame = 1 

Query: 16  ETPLLDAQHPSLLHSISDQGGYAFVTMAALAAAGDSCAAETAADMAWEQLHSGPSSSVLP 75
           ETP LD++  ++L S++++GGYA+ TM +LAAAGD  AAE A +MAWEQLHSGP  SV+P
Sbjct: 22  ETPFLDSERWNILQSVTEEGGYAYATMTSLAAAGDIRAAEAAKEMAWEQLHSGPWHSVVP 81

Query: 76  IWRDAYSMACLYLARLHFAGGEFKEALRVLDMGLIMGGSRLRSDLDSAIAKVSAEAR--- 135
           IWRDAYSMAC++LA+LH+A GEF EA++ LDMG+IMGG  LR +L+ AI K S + +   
Sbjct: 82  IWRDAYSMACMHLAKLHYANGEFNEAIKALDMGIIMGGMMLRDELNLAIRKASEKEKAKS 141

Query: 136 ------------IVRVLDVA-AEDGLMESSLGCDECNKEMSGLSLEGFLREYFQPGFPVI 195
                       + + ++VA  +  L   SL C    K  + LSLE FLRE++  G PV+
Sbjct: 142 DLGEKGESEIKFVSQEINVAEVQQSLPIKSLSCKLVGKRPA-LSLEAFLREHYLSGTPVV 201

Query: 196 VSDGMAHWPARTKWKSLDYLHRVAGDRTIPVETCKALM-------LFRLGTTIYAHNGNN 255
           + D M HWPA+++W  ++YL RVAG RT+PVE  K  +       L      +     N+
Sbjct: 202 IRDSMDHWPAKSRWNDMNYLRRVAGFRTVPVEVGKNYLCPEWKQELITFSEFLERIRSND 261

Query: 256 SSLHFPNFLTGFSPMILLIIS--------HTLLTIHYLTRH-----VLGKKYIRLYDASL 315
           ++     +L        +  S         T+  +H+   H     V+GKKY+RLY ASL
Sbjct: 262 TTSVETTYLAQHQLFDQIQESLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYVRLYSASL 321

Query: 316 SEELYPYNTETMLCNSSQVDLDNIDEKEFGKVVDLEFVDCILEEGEMLYIPPKWWHYGRS 356
           S+EL+P+ +ETML NSSQVDLDNIDEKEF  ++DLEF DCILEEGEMLYIPPKWWHY RS
Sbjct: 322 SDELHPH-SETMLSNSSQVDLDNIDEKEFPNILDLEFQDCILEEGEMLYIPPKWWHYVRS 381

[Close]
BLAST of Cp4.1LG18g01550 vs. TrEMBL
Match: M1BX77_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400021346 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 3.4e-87
Identity = 185/395 (46.84%), Postives = 247/395 (62.53%), Query Frame = 1 

Query: 16  ETPLLDAQHPSLLHSISDQGGYAFVTMAALAAAGDSCAAETAADMAWEQLHSGPSSSVLP 75
           ETP LD++  ++L SI+++GGYA+ TM +LAAAGD  AAE A +MAWEQLHSGP  SV+P
Sbjct: 22  ETPFLDSERWNILQSIAEEGGYAYATMTSLAAAGDIRAAEAAKEMAWEQLHSGPWHSVVP 81

Query: 76  IWRDAYSMACLYLARLHFAGGEFKEALRVLDMGLIMGGSRLRSDLDSAIAKVSAEAR--- 135
           IWRDAYSMAC++LA+LH+A GEF +A++ LDMG+IMGG  LR +L+ AI K S + +   
Sbjct: 82  IWRDAYSMACMHLAKLHYANGEFNQAIKALDMGIIMGGMMLRDELNLAIRKASEKEKARS 141

Query: 136 ------------IVRVLDVA-AEDGLMESSLGCDECNKEMSGLSLEGFLREYFQPGFPVI 195
                       + + ++VA  +  L   SL C    K  + LSLE FLR+++  G PV+
Sbjct: 142 DLGDKGESEIKFVSQEINVAEVQQSLPIKSLSCKLVGKSPA-LSLEAFLRDHYLSGTPVV 201

Query: 196 VSDGMAHWPARTKWKSLDYLHRVAGDRTIPVE---------------------------- 255
           + D M HWPA++KW  ++YL RVAG RT+PVE                            
Sbjct: 202 IRDSMDHWPAKSKWNDMNYLRRVAGFRTVPVEVGKNYLCPEWKQELITFSEFLERTRSND 261

Query: 256 TCKALMLFRLGTTIYAHNGN-NSSLHFPNF-LTGFSPMILLII----SHTLLTIHYLTRH 315
           T      +     ++         +  P++  TG   +  L      + T+  +H+   H
Sbjct: 262 TTSVETTYLAQHQLFDQIQELRQDIVIPDYCFTGGGEIRSLNAWFGPARTVTPLHHDPHH 321

Query: 316 -----VLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKVVDLEFVDCI 356
                V+GKKY+RLY ASLS+EL+P+ +ETML NSSQVDLDNIDEKEF  ++DLEF DCI
Sbjct: 322 NILAQVVGKKYVRLYSASLSDELHPH-SETMLSNSSQVDLDNIDEKEFPNILDLEFQDCI 381

[Close]
BLAST of Cp4.1LG18g01550 vs. TrEMBL
Match: K7LPI7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G130600 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 7.5e-87
Identity = 204/414 (49.28%), Postives = 257/414 (62.08%), Query Frame = 1 

Query: 1   MSSSESKQTPSSYHFETPLLDAQHPSLLHSISDQGGYAFVTMAALAAAGDSCAAETAADM 60
           +++S S     S  F+TP LD +  +LLH+IS+ GGYA+V+MAALAA GD  AAE A +M
Sbjct: 2   LTNSASGGDAPSRGFDTPTLDLESAALLHAISEHGGYAYVSMAALAANGDIRAAEAACEM 61

Query: 61  AWEQLHSGPSSSVLPIWRDAYSMACLYLARLHFAGGEFKEALRVLDMGLIMGGSRLRSD- 120
           AWEQLHSGP  SVLP+WRDAYSMACL +AR H+  GEF++ALRVLD+G+IMGG+ LR D 
Sbjct: 62  AWEQLHSGPWHSVLPVWRDAYSMACLLVARHHYRNGEFRDALRVLDLGIIMGGTLLRKDL 121

Query: 121 ------LDSAIAKV-------SAEARIV-RVLDVAAEDGLMESSLGCDECNKEMSGLSLE 180
                 +     K        ++E R+V R  D+A    L+      ++   + S LSLE
Sbjct: 122 DSAIEKISEQTRKTVRVSDLGNSEHRLVDREFDMAEVLQLLPVKSLSNKLVAKKSALSLE 181

Query: 181 GFLREYFQPGFPVIVSDGMAHWPARTKWKSLDYLHRVAGDRTIPVETCKALM-------- 240
            FL++++  G PVI+SD MAHWPA+ KW   DYL RVAGDRT+PVE  K  +        
Sbjct: 182 KFLKDHYLSGCPVIISDCMAHWPAKMKWNDEDYLLRVAGDRTVPVEVGKNYLCTEWKQEL 241

Query: 241 ------LFRL--------GTTIYAH-------NGNNSSLHFPNF-LTGFSPMILLII--- 300
                 L R+        G T  A        N     +  P++  TG   +  L     
Sbjct: 242 ITFSEFLQRIKSDSCSPGGLTYLAQHPLFDQINELRKDIFIPDYCFTGGGELRSLNAWFG 301

Query: 301 -SHTLLTIHYLTRH-----VLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEK 360
            + T+  +H+   H     V+GKKYIRLY +SLSEEL P++  TML NSSQVDLD+IDE 
Sbjct: 302 PAGTVTPLHHDPHHNILAQVVGKKYIRLYSSSLSEELSPHSG-TMLHNSSQVDLDDIDEN 361

[Close]
BLAST of Cp4.1LG18g01550 vs. TAIR10
Match: AT3G20810.2 (AT3G20810.2 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein)

HSP 1 Score: 153.7 bits (387), Expect = 2.2e-37
Identity = 82/143 (57.34%), Postives = 103/143 (72.03%), Query Frame = 1 

Query: 2   SSSESKQTPSSYHFETPLLDAQHPSLLHSISDQGGYAFVTMAALAAAGDSCAAETAADMA 61
           +++ S    ++    TP LDA+  +LL SIS +GGYA+  MA LA AGD  AAE A DMA
Sbjct: 4   ATTASSGDHNNLRLPTPTLDAESQTLLQSISAEGGYAYARMAVLAVAGDQSAAEAARDMA 63

Query: 62  WEQLHSGPSSSVLPIWRDAYSMACLYLARLHFAGGEFKEALRVLDMGLIMGGSRLRSDLD 121
           WEQLHSGP  SVLP+WRDAYSMACL++A++HFA GEF EAL  LDMGLIMGG  LR DL 
Sbjct: 64  WEQLHSGPWHSVLPVWRDAYSMACLHVAKIHFAAGEFGEALGALDMGLIMGGMLLRKDLH 123

Query: 122 SAIAKVSAEAR-IVRVLDVAAED 144
            ++  VS+EAR + + L+ A+ D
Sbjct: 124 DSVLLVSSEARKMTKSLEEASGD 146

[Close]
BLAST of Cp4.1LG18g01550 vs. NCBI nr
Match: gi|659099202|ref|XP_008450484.1| (PREDICTED: lysine-specific demethylase 8 [Cucumis melo])

HSP 1 Score: 493.4 bits (1269), Expect = 3.3e-136
Identity = 269/394 (68.27%), Postives = 294/394 (74.62%), Query Frame = 1 

Query: 1   MSSSESKQTPSSYHFETPLLDAQHPSLLHSISDQGGYAFVTMAALAAAGDSCAAETAADM 60
           MSSSE K++PSS+HFETPLLDA+  SLLHSIS+ GGYA+V+M ALAAAGDS AAE A +M
Sbjct: 1   MSSSEPKRSPSSFHFETPLLDAESHSLLHSISEHGGYAYVSMVALAAAGDSRAAEAAGEM 60

Query: 61  AWEQLHSGPSSSVLPIWRDAYSMACLYLARLHFAGGEFKEALRVLDMGLIMGGSRLRSDL 120
           AWEQLHSGP  SVLPIWRDAYSMACLYLAR HFAGGEFKEALRVLDMG+IMGG   R+DL
Sbjct: 61  AWEQLHSGPWHSVLPIWRDAYSMACLYLARFHFAGGEFKEALRVLDMGVIMGGPLFRNDL 120

Query: 121 DSAIAKVSAEARIVRVLDVAAEDGLM-ESSLGCDECNKE-----------------MSGL 180
           DSAIAKVSAEAR VRVL    EDG + ESSLGC+E N E                 MS L
Sbjct: 121 DSAIAKVSAEARSVRVL----EDGRVDESSLGCEERNNEVAWNLPVKALTNKMIAKMSSL 180

Query: 181 SLEGFLREYFQPGFPVIVSDGMAHWPARTKWKSLDYLHRVAGDRTIPVETCKALMLFRLG 240
           SLEGFLREYFQPGFPVI+SDGMAHWPARTKWK++DYL ++AG RTIPVE         +G
Sbjct: 181 SLEGFLREYFQPGFPVIISDGMAHWPARTKWKNMDYLQKIAGGRTIPVE---------VG 240

Query: 241 TTIYAHNGNNSSLHFPNFLTGF-----SPMILLIISHTL-----------LTIHYLTRHV 300
                       + F  FL+       S  I  +  H L           LT++Y    V
Sbjct: 241 KNYLRPEWKQELITFSEFLSRIQSNDRSDDITYLAQHPLFDQVCSVFRETLTMYYSLMQV 300

Query: 301 LGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKVVDLEFVDCILEEGEM 360
           LGKKYIRLYDASLSEELYPY TETMLCNSSQVDLDNIDEK F KVVDLEFVDCILEEGEM
Sbjct: 301 LGKKYIRLYDASLSEELYPY-TETMLCNSSQVDLDNIDEKAFPKVVDLEFVDCILEEGEM 360

[Close]
BLAST of Cp4.1LG18g01550 vs. NCBI nr
Match: gi|1021051607|gb|KZN09385.1| (hypothetical protein DCAR_002041 [Daucus carota subsp. sativus])

HSP 1 Score: 347.4 bits (890), Expect = 2.9e-92
Identity = 198/369 (53.66%), Postives = 240/369 (65.04%), Query Frame = 1 

Query: 15  FETPLLDAQHPSLLHSISDQGGYAFVTMAALAAAGDSCAAETAADMAWEQLHSGPSSSVL 74
           FE+PLL +  PSLLH IS+ GGYA+V+M  L A GD  AAE A +MAWEQLHSGP +SVL
Sbjct: 10  FESPLLASHSPSLLHQISEHGGYAYVSMYTLGAGGDHRAAEAAREMAWEQLHSGPWNSVL 69

Query: 75  PIWRDAYSMACLYLARLHFAGGEFKEALRVLDMGLIMGGSRLRSDLDSAIAKVSAEARIV 134
           P+WRDAYSMACL +A+   A GE+KEALRVLD+G+IMGG  LR DLD AIA   A+    
Sbjct: 70  PVWRDAYSMACLLVAKHCCAVGEYKEALRVLDLGVIMGGLTLRKDLDDAIAITKAKESGA 129

Query: 135 ----------RVLDVAAEDGLME-------SSLGCDECNKEMSGLSLEGFLREYFQPGFP 194
                     RVL V AE  L E        SL C    K  + LSLE FLR+YF    P
Sbjct: 130 CSISEGNEGKRVL-VDAEFNLKEMLQLLPKQSLSCKLVGKRPA-LSLEAFLRDYFLSASP 189

Query: 195 VIVSDGMAHWPARTKWKSLDYLHRVAGDRTIPVETCKALM-------LFRLGTTIYAHNG 254
           VI+SD M HWPAR KW  ++YL +VAG RT+PVE  K  +       L      +     
Sbjct: 190 VILSDCMVHWPARVKWNDINYLKKVAGSRTVPVEVGKNYLCTEWKQELITFSEFLERIQT 249

Query: 255 NNSSLHFPNFLTGFSPMILLIISHTLLTIHY--LTRHVLGKKYIRLYDASLSEELYPYNT 314
           N+S+   P +L          IS  +  + Y  L   ++GKKY+RLY ASLSEEL P++ 
Sbjct: 250 NDSTSSVPTYLAQHPLFDQACISSDVYKLLYRILAVPIVGKKYVRLYPASLSEELCPHS- 309

Query: 315 ETMLCNSSQVDLDNIDEKEFGKVVDLEFVDCILEEGEMLYIPPKWWHYGRSLTTSFSVSF 358
           E+MLCNSSQVDLDNIDEK+F  + +LEF+DCILEEGEMLYIPPKWWHY RSLTTSFSVSF
Sbjct: 310 ESMLCNSSQVDLDNIDEKQFPNIQNLEFMDCILEEGEMLYIPPKWWHYVRSLTTSFSVSF 369

[Close]
BLAST of Cp4.1LG18g01550 vs. NCBI nr
Match: gi|976902889|gb|KVH90819.1| (JmjC domain-containing protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 345.1 bits (884), Expect = 1.5e-91
Identity = 194/358 (54.19%), Postives = 233/358 (65.08%), Query Frame = 1 

Query: 15  FETPLLDAQHPSLLHSISDQGGYAFVTMAALAAAGDSCAAETAADMAWEQLHSGPSSSVL 74
           F TP+LD Q  SLL SIS++GGYA+V+M+  AAAGD  AAE A +MAWEQLHSGP  SVL
Sbjct: 10  FGTPVLDDQAHSLLQSISEEGGYAYVSMSTRAAAGDIRAAEAAREMAWEQLHSGPWHSVL 69

Query: 75  PIWRDAYSMACLYLARLHFAGGEFKEALRVLDMGLIMGGSRLRSDLDSAIAKVSAEAR-I 134
           P+WRDAYSMACL++A+ H+A G+F+EALRVLDMGLIMGG  LR DLDSA+ K +  A  +
Sbjct: 70  PVWRDAYSMACLHVAKFHYANGDFREALRVLDMGLIMGGMVLRKDLDSAVEKATERANAL 129

Query: 135 VRVLDVAAE--------------------DGLMESSLGCDECNKEMSGLSLEGFLREYFQ 194
           +RV + +                        L + SL C    K  S LSLEGF+R+YF 
Sbjct: 130 LRVSEESVNGSANAKLLTNQNAINLMEVVQSLPKRSLSCKLVGKR-SALSLEGFMRDYFL 189

Query: 195 PGFPVIVSDGMAHWPARTKWKSLDYLHRVAGDRTIPVETCKALMLFRLGTTIYAHNGNNS 254
            G PV++SD M HWPARTKW  L+YL +VAG RT+PVE  K                N  
Sbjct: 190 SGSPVLLSDSMTHWPARTKWNDLNYLKKVAGYRTVPVEVGK----------------NYL 249

Query: 255 SLHFPNFLTGFSPMILLIISHTLLTIHYLTRHVLGKKYIRLYDASLSEELYPYNTETMLC 314
              +   +  FS  +  I S +     YL +H L      LY ASLSEELYP+ +E+ML 
Sbjct: 250 CTDWKQEMLTFSEFLERIQSKSSAAPTYLAQHPL------LYPASLSEELYPH-SESMLK 309

Query: 315 NSSQVDLDNIDEKEFGKVVDLEFVDCILEEGEMLYIPPKWWHYGRSLTTSFSVSFWWN 352
           NSSQVDLDN+D  EF K+ DLEFVDCILEEGEMLYIPPKWWHY RSLTTS SVSFWW+
Sbjct: 310 NSSQVDLDNMDANEFPKIQDLEFVDCILEEGEMLYIPPKWWHYVRSLTTSLSVSFWWS 343

[Close]
BLAST of Cp4.1LG18g01550 vs. NCBI nr
Match: gi|697180560|ref|XP_009599261.1| (PREDICTED: putative lysine-specific demethylase JMJD5 [Nicotiana tomentosiformis])

HSP 1 Score: 332.8 bits (852), Expect = 7.5e-88
Identity = 194/409 (47.43%), Postives = 249/409 (60.88%), Query Frame = 1 

Query: 8   QTPSSYH--FETPLLDAQHPSLLHSISDQGGYAFVTMAALAAAGDSCAAETAADMAWEQL 67
           +T  SY    ETP LDA+  +LL  I+++GGYA+V+MA LAAAGD  AAE A +MAWEQL
Sbjct: 11  ETTGSYDGVLETPFLDAERSNLLQLIAEEGGYAYVSMATLAAAGDIRAAEAAKEMAWEQL 70

Query: 68  HSGPSSSVLPIWRDAYSMACLYLARLHFAGGEFKEALRVLDMGLIMGGSRLRSDLDSAIA 127
           HSGP  SV+P+WRDAYSMAC++LA+LH+A GE  +A+R LDMG+IMGG  LR +L+ AI 
Sbjct: 71  HSGPWHSVVPVWRDAYSMACVHLAKLHYASGEITQAIRALDMGIIMGGMMLRDELNLAIK 130

Query: 128 KVSAEAR--------------------IVRVLDVA-AEDGLMESSLGCDECNKEMSGLSL 187
           K S +AR                    + + ++VA  +  L   SL C    K  S LSL
Sbjct: 131 KASKKARSMLLASSENGGEKGEPEIKFVSQEINVAEVQQFLPIKSLSCKTVGKR-SALSL 190

Query: 188 EGFLREYFQPGFPVIVSDGMAHWPARTKWKSLDYLHRVAGDRTIPVE------------- 247
           E FLR+++  G PVI+ D M HWPA++KW  ++YL RVAG RT+PVE             
Sbjct: 191 EAFLRDHYLSGIPVIIRDSMDHWPAKSKWNDMNYLRRVAGFRTVPVEVGKNYLCPEWKQE 250

Query: 248 ---------------TCKALMLFRLGTTIYAHNGN-NSSLHFPNF-LTGFSPMILLII-- 307
                          T      +     ++         +  P++  TG   +  L    
Sbjct: 251 LITFSEFLERIRSDDTTSVETTYLAQHQLFDQIQELRQDIVIPDYCFTGGGEIRSLNAWF 310

Query: 308 --SHTLLTIHYLTRH-----VLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDE 355
             + T+  +H+   H     V+GKKY+RLY ASLS+EL P++ ETML NSSQVDLDNIDE
Sbjct: 311 GPAGTVTPLHHDPHHNILAQVVGKKYVRLYSASLSDELLPHS-ETMLSNSSQVDLDNIDE 370

[Close]
BLAST of Cp4.1LG18g01550 vs. NCBI nr
Match: gi|565363387|ref|XP_006348418.1| (PREDICTED: putative lysine-specific demethylase JMJD5 [Solanum tuberosum])

HSP 1 Score: 330.1 bits (845), Expect = 4.8e-87
Identity = 185/395 (46.84%), Postives = 247/395 (62.53%), Query Frame = 1 

Query: 16  ETPLLDAQHPSLLHSISDQGGYAFVTMAALAAAGDSCAAETAADMAWEQLHSGPSSSVLP 75
           ETP LD++  ++L SI+++GGYA+ TM +LAAAGD  AAE A +MAWEQLHSGP  SV+P
Sbjct: 22  ETPFLDSERWNILQSIAEEGGYAYATMTSLAAAGDIRAAEAAKEMAWEQLHSGPWHSVVP 81

Query: 76  IWRDAYSMACLYLARLHFAGGEFKEALRVLDMGLIMGGSRLRSDLDSAIAKVSAEAR--- 135
           IWRDAYSMAC++LA+LH+A GEF +A++ LDMG+IMGG  LR +L+ AI K S + +   
Sbjct: 82  IWRDAYSMACMHLAKLHYANGEFNQAIKALDMGIIMGGMMLRDELNLAIRKASEKEKARS 141

Query: 136 ------------IVRVLDVA-AEDGLMESSLGCDECNKEMSGLSLEGFLREYFQPGFPVI 195
                       + + ++VA  +  L   SL C    K  + LSLE FLR+++  G PV+
Sbjct: 142 DLGDKGESEIKFVSQEINVAEVQQSLPIKSLSCKLVGKSPA-LSLEAFLRDHYLSGTPVV 201

Query: 196 VSDGMAHWPARTKWKSLDYLHRVAGDRTIPVE---------------------------- 255
           + D M HWPA++KW  ++YL RVAG RT+PVE                            
Sbjct: 202 IRDSMDHWPAKSKWNDMNYLRRVAGFRTVPVEVGKNYLCPEWKQELITFSEFLERTRSND 261

Query: 256 TCKALMLFRLGTTIYAHNGN-NSSLHFPNF-LTGFSPMILLII----SHTLLTIHYLTRH 315
           T      +     ++         +  P++  TG   +  L      + T+  +H+   H
Sbjct: 262 TTSVETTYLAQHQLFDQIQELRQDIVIPDYCFTGGGEIRSLNAWFGPARTVTPLHHDPHH 321

Query: 316 -----VLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKVVDLEFVDCI 356
                V+GKKY+RLY ASLS+EL+P+ +ETML NSSQVDLDNIDEKEF  ++DLEF DCI
Sbjct: 322 NILAQVVGKKYVRLYSASLSDELHPH-SETMLSNSSQVDLDNIDEKEFPNILDLEFQDCI 381

The following BLAST results are available for this feature:
BLAST of Cp4.1LG18g01550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
JMJ30_ARATH3.9e-3657.34Lysine-specific demethylase JMJ30 OS=Arabidopsis thaliana GN=JMJ30 PE=1 SV=1[more]
KDM8_RAT1.1e-1954.65Lysine-specific demethylase 8 OS=Rattus norvegicus GN=Kdm8 PE=2 SV=1[more]
KDM8_MOUSE1.1e-1954.65Lysine-specific demethylase 8 OS=Mus musculus GN=Kdm8 PE=2 SV=1[more]
KDM8_BOVIN3.3e-1952.33Lysine-specific demethylase 8 OS=Bos taurus GN=KDM8 PE=2 SV=1[more]
KDM8_HUMAN5.6e-1953.49Lysine-specific demethylase 8 OS=Homo sapiens GN=KDM8 PE=1 SV=1[more]
BLAST of Cp4.1LG18g01550 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A166GV34_DAUCA2.0e-9253.66Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_002041 PE=4 SV=1[more]
A0A118JTI3_CYNCS1.0e-9154.19JmjC domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_00716... [more]
K4ASN4_SOLLC1.9e-9049.20Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
M1BX77_SOLTU3.4e-8746.84Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400021346 PE=4 SV=1[more]
K7LPI7_SOYBN7.5e-8749.28Uncharacterized protein OS=Glycine max GN=GLYMA_11G130600 PE=4 SV=1[more]
BLAST of Cp4.1LG18g01550 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G20810.22.2e-3757.34 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily prot... [more]
BLAST of Cp4.1LG18g01550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659099202|ref|XP_008450484.1|3.3e-13668.27PREDICTED: lysine-specific demethylase 8 [Cucumis melo][more]
gi|1021051607|gb|KZN09385.1|2.9e-9253.66hypothetical protein DCAR_002041 [Daucus carota subsp. sativus][more]
gi|976902889|gb|KVH90819.1|1.5e-9154.19JmjC domain-containing protein [Cynara cardunculus var. scolymus][more]
gi|697180560|ref|XP_009599261.1|7.5e-8847.43PREDICTED: putative lysine-specific demethylase JMJD5 [Nicotiana tomentosiformis... [more]
gi|565363387|ref|XP_006348418.1|4.8e-8746.84PREDICTED: putative lysine-specific demethylase JMJD5 [Solanum tuberosum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003347JmjC_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0070544 histone H3-K36 demethylation
biological_process GO:0010452 histone H3-K36 methylation
biological_process GO:0042752 regulation of circadian rhythm
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0044238 primary metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0046975 histone methyltransferase activity (H3-K36 specific)
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG18g01550.1Cp4.1LG18g01550.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003347JmjC domainPROFILEPS51184JMJCcoord: 176..360
score: 15
NoneNo IPR availableGENE3DG3DSA:2.60.120.650coord: 158..231
score: 2.2E-7coord: 263..351
score: 4.9
NoneNo IPR availablePANTHERPTHR12461HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATEDcoord: 54..352
score: 3.7
NoneNo IPR availablePANTHERPTHR12461:SF38LYSINE-SPECIFIC DEMETHYLASE 8coord: 54..352
score: 3.7
NoneNo IPR availablePFAMPF13621Cupin_8coord: 266..352
score: 1.5
NoneNo IPR availableunknownSSF51197Clavaminate synthase-likecoord: 159..352
score: 1.65

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG18g01550Cucsa.143230Cucumber (Gy14) v1cgycpeB0382
Cp4.1LG18g01550CmaCh10G009430Cucurbita maxima (Rimu)cmacpeB080
Cp4.1LG18g01550CmaCh11G008350Cucurbita maxima (Rimu)cmacpeB126
Cp4.1LG18g01550CmoCh11G008460Cucurbita moschata (Rifu)cmocpeB104
Cp4.1LG18g01550CmoCh10G009890Cucurbita moschata (Rifu)cmocpeB055
Cp4.1LG18g01550Cla006286Watermelon (97103) v1cpewmB355
Cp4.1LG18g01550Csa1G612920Cucumber (Chinese Long) v2cpecuB349
Cp4.1LG18g01550MELO3C015209Melon (DHL92) v3.5.1cpemeB329
Cp4.1LG18g01550ClCG03G013420Watermelon (Charleston Gray)cpewcgB327
Cp4.1LG18g01550CSPI01G30180Wild cucumber (PI 183967)cpecpiB350
Cp4.1LG18g01550Lsi06G005100Bottle gourd (USVL1VR-Ls)cpelsiB299
Cp4.1LG18g01550MELO3C015209.2Melon (DHL92) v3.6.1cpemedB387
Cp4.1LG18g01550CsaV3_1G042600Cucumber (Chinese Long) v3cpecucB0428
Cp4.1LG18g01550Bhi02G001339Wax gourdcpewgoB0461
Cp4.1LG18g01550CsGy1G029550Cucumber (Gy14) v2cgybcpeB039
Cp4.1LG18g01550Carg16953Silver-seed gourdcarcpeB0655
Cp4.1LG18g01550Carg17982Silver-seed gourdcarcpeB0247
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG18g01550Cp4.1LG04g11900Cucurbita pepo (Zucchini)cpecpeB363
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG18g01550Wax gourdcpewgoB0444
Cp4.1LG18g01550Wax gourdcpewgoB0455
Cp4.1LG18g01550Wax gourdcpewgoB0468
Cp4.1LG18g01550Cucurbita pepo (Zucchini)cpecpeB287
Cp4.1LG18g01550Cucurbita pepo (Zucchini)cpecpeB328
Cp4.1LG18g01550Cucurbita pepo (Zucchini)cpecpeB369
Cp4.1LG18g01550Cucumber (Gy14) v1cgycpeB0049
Cp4.1LG18g01550Cucurbita maxima (Rimu)cmacpeB397
Cp4.1LG18g01550Cucurbita maxima (Rimu)cmacpeB567
Cp4.1LG18g01550Cucurbita maxima (Rimu)cmacpeB632
Cp4.1LG18g01550Cucurbita moschata (Rifu)cmocpeB519
Cp4.1LG18g01550Wild cucumber (PI 183967)cpecpiB377
Cp4.1LG18g01550Bottle gourd (USVL1VR-Ls)cpelsiB281
Cp4.1LG18g01550Bottle gourd (USVL1VR-Ls)cpelsiB293
Cp4.1LG18g01550Watermelon (Charleston Gray)cpewcgB320
Cp4.1LG18g01550Watermelon (97103) v1cpewmB368
Cp4.1LG18g01550Melon (DHL92) v3.5.1cpemeB327
Cp4.1LG18g01550Melon (DHL92) v3.5.1cpemeB341
Cp4.1LG18g01550Cucumber (Gy14) v2cgybcpeB939
Cp4.1LG18g01550Melon (DHL92) v3.6.1cpemedB400
Cp4.1LG18g01550Melon (DHL92) v3.6.1cpemedB385
Cp4.1LG18g01550Silver-seed gourdcarcpeB0735
Cp4.1LG18g01550Silver-seed gourdcarcpeB1276
Cp4.1LG18g01550Cucumber (Chinese Long) v3cpecucB0469