Cp4.1LG18g01140 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG18g01140
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Glycosyl hydrolase
Location	Cp4.1LG18 : 2825541 .. 2829614 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATCGAACGAATGTTAAATCGACGAAGGTTTGGGTATCGAACGAATTGTGTTTCCGATTGGAAAATCGTTCGTCTTCAGTGTTAGATCTGTCTCAGATTCGGTTCCGGCGAGTTGAAATCCTACCGGATTAGGGAGATTCGCGATTCTTTTGTTCTTCACGCGGAGGAATTGTTTCATTTTGGAGCCAAATGGAAGGTTTTACCGGAGAAGATCTGTCAACAATCGGAGGAATTGCGACCGTGTCGCTTCTGCATTCCTTCATTCCCACTCACTGGCTTCCTTTCTCCGTCGTCGGTCGCGTCCAGAAATGGACTCTCTCCAGGACTCTCCTCGTCAGTATGTTATCTGCAACCGATCGCATTTCTTAGATCTTTTATTTTCGCTTCTGTTTCACCTTCCATTTTGTTTATCGATTTTCGAGTTTCTCGGAAAATTTGTTCGGATGTTGCTCTGAGTAGCTTATGTGATCGTAACCTTAATTAGAGAAAGATCGCTTATGCTGGACTTGATTATCAAAATGCAGTTAAATTGGTGTTTTTAGCTGAATCTTGTCCCGTGTTACCGTGACAAAGTTGTCTTAATATCCCGGTGGTTTCGCCGATTAGTGGCTGCAGAGTAGGGTTTTATCATACCTGCTCATAATCTAATTGTGAGATCTGGCGAATTATATATCTTTATTAGCGTAGTTAGTCTTTATCATCACTGTTCTTATCATATTTGAGAATGATTCCACATAATATACTTATTTATGCTGCTGTTGATACTCTGTTTAACGTGTTATATATTCTTTTTTCTCGTCTTGATGTTTACTCAGCTGGCCTCTAGATCTAGAATAATGATAAAACTTAAAGAGGAATTTTTAGTGCATGAATGTAATGGCAGCTGCACGGTTTGGCCAATTCTGAGCTAGTTTGGAGCTTGGTCAGTTGGAGATTTGGTTTTTTTGTCAATTGATTAATCTCAGGGTTGCAGATTGGAATGGGATTACAGACCATAATGACGAAAAAACGTGCAAATTTTTTAATCTCACAACGCTAGCAGTTGGAAATCTTATGTTTATATGCATATTTGATTTTGCAGCTGCTTTTGGAGCAATTTTACATGTCATATCGACTTCACTTCTTGGAATAACAGCAATCACGATGGCTAATACAATTGCCGGTGAAGAAACCGTGCACAAGCTGGCCTCTCTTTTGCTTATAGTTCTTGGAGGTTGTTATGTTCTGTTGTTTATGACTGGTAGAGGTAGTCATAGTCACTCCCATAACCAACCGATGGAGAAAATGGCTGTTGCTGGTCTTGTCCTTGTACCTGCTTTATCTCCTTGTGCAACCACTCTTCCAGTGTTTCTTGCTGTTGGAAATTCATCTTCCATGATGATCCTTGCTATCATAGTGCTGCTATTCAGGTATCAATTGTATAGCATTAAACTTTCTTGTATGTTGTACATTATGCAACTTCTTTGTTTGGTTGAAAGAAACCAACTTTTGGAAAGAAAAATGGAGGGTAGGAAGTGAACAAATGATTCCTAAGTCGACCAGAGGGCTACATGAAATAGGAAAAGAAGAAAACAAGAGACGAACATAGATAATAAAAAATGTCGGAAGGTCACCCGACATCTTGCGATCTCCCTACAACATCAATATCTATTCTTTAACCCTTCGACCCAAATATTCTAGGGAATTGTGGAAATGCCAAATTTCCACGAAGCTCTTCTTTGGTGCAAGAAGGTGGACACAACAAAACTTCCTCAATCCAAACTTGGTTCGTCTGGCTAGGAGCAAATGAGAATTGAAAAAGTCCATAGAAATTCTCTCCACATCTCTCAGTAGAGTGGACAAAGCCCTATGAGTGAGCAGTATCTTCAGACCTTTGCTTATATAAAACAATTCATCAGAGAAAAAGTGCCACAAAACATCCTTTAATGAAAACTTTGGTTTTGATCCTGCCAAAAGCAATGAGCTTAGGGAAGAATCAAGGATTTATCATATCTTTGGAAATTTGGATTTCGTAGTTTATAAAATGGAGGGGAGAGTGTGTATTATGGTAGGATGCCAAATGGTTAGAAAGATGGCTGTAAAAGAAGATACAAGAGGACTCTAAGATCCAAACATGCCTATCCCATACCTTGATGAAGGTTAATTCCTTGTAAAGTACTGAGGAGGGGAAAAAACTATTAGTATCTCTATCAAAAAAGAGGTCTGAAAATCGAAGTTCAAAGAAAAAACTCCCACAAAAGGTAAGTCCACTACTATATAAACATCTTTTGCGTGAGAAATCACATGCATGCAAGGAAAGCCAGATCGAGGAGAGGTACGGCCCAATCAAATATCCTCCTAGAAATGAATATTTTAAGGATTTGAGAAAAGTCTAAAAGACAATGGGAGGCACCTTAGAATTTCAAAAAATATTAGTGGAAACCACACCATACTATTAGTGTAGAGACATTACGTAATAATTTGATATCAAAGTGGGTAGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTGGAGGAAACTGGCACGATCCACCTGGGATTATACATCCCTGTTGTAAATTTCAATCATCAATGAAAATTGTCTCTTTAAAAAAAAAAAAAATGGCACGATCATTTGTACATTGTGCCACCGTTGAGAGCCTCAAAGAAAGTTGGAAAGCACTCACAAATTTTAGGGGTTGTACATTGGCATGAAATAAGTTAGCTTTTGAAGCCGAACTGCCAAAAGCTGATAAAAACACATCCTTATACTAGAATGAAGATAGCCGTGTTAGGAATTACGGATCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAACTCTCATGGCATTGTTTTGGGCTTCCCCAAAAAGCATTAGACCAATGGAGATGTATTTCTTACTCGTAAACCCATGATTATTCCCTAAATTAGCCGATGTGAGACTCCCTCCAACCATCCTCAACAAGTCGCCCTCCTCCTGGCTGCTCGTTCTTACCATTAGTAGATTTACCTTTGAATTGTAATTATATGCTGCTGTAAATCTACTTTCAGCTGAGATACGCTAATATAATATCGATAATGCTGATTCACATCAATGACAACTATTTAGCGAACGTGCAAAGGTCATCGCTGCAAAAGTTCTACTTGTTTGTTTTAAGCAGGCTTGTTTTCTGAACACGAGTCGAACCTTATTGTTCAACTAATTGGACATATCAATGTAATTATGATGTTTGTGAGGGAGCATTATTTATTTCATAGCATTCCAAGGAATTTATCACAAAACCATTTCATTGATACATAGTTTTCTCTCTGGTGTTGGACTTTTGCATTTTGCAGCACAATAACCGTGATGACTTCGTTGGTAGCTTTATCGTTCTACGGTGCGAGTCAGCTCAAGTTTCACTGGGTTGAACGCTATGACAAGCTTCTTGTAGGTTCGGTGCTGTGCGTGGTAGGTATTCTGACTCTCATCTTTCACGACCACGAGCACGACCACCACGGTCATGGAGGTTCCATAGGAGACAATTTGCATAGGAAAATTATTGTACTTTGAGGATTCTTCATATTATATCTTATATCCCTCAGACACTTATAATTTTGATCTTCTGGGAAATTTCAAGACTGACTTTGAAACCTTGTATTATATGTGAGCCCCAAGTGGTGGGTTTAAAGGTCAGTTTCTTGTATTCCTTTGTTGCTTTTGTCACATTTTAAGAATTTTTTTTCATGTATGATGAATAGAATGTTAACGTCCTGCATCATTACTTTGTATTTTCATCTTTCAAGGTGCATAAAATTGGTACTTTGACTTGTCGATCGAGCTCGACTTTTATACTTCTAGAGCCTATTTGGTATGACTTTTTAAGCGTTGGAATACTCTTTTTTATCCACCCGAAGAGT

mRNA sequence

AAAAATCGAACGAATGTTAAATCGACGAAGGTTTGGGTATCGAACGAATTGTGTTTCCGATTGGAAAATCGTTCGTCTTCAGTGTTAGATCTGTCTCAGATTCGGTTCCGGCGAGTTGAAATCCTACCGGATTAGGGAGATTCGCGATTCTTTTGTTCTTCACGCGGAGGAATTGTTTCATTTTGGAGCCAAATGGAAGGTTTTACCGGAGAAGATCTGTCAACAATCGGAGGAATTGCGACCGTGTCGCTTCTGCATTCCTTCATTCCCACTCACTGGCTTCCTTTCTCCGTCGTCGGTCGCGTCCAGAAATGGACTCTCTCCAGGACTCTCCTCGTCACTGCTTTTGGAGCAATTTTACATGTCATATCGACTTCACTTCTTGGAATAACAGCAATCACGATGGCTAATACAATTGCCGGTGAAGAAACCGTGCACAAGCTGGCCTCTCTTTTGCTTATAGTTCTTGGAGGTTGTTATGTTCTGTTGTTTATGACTGGTAGAGGTAGTCATAGTCACTCCCATAACCAACCGATGGAGAAAATGGCTGTTGCTGGTCTTGTCCTTGTACCTGCTTTATCTCCTTGTGCAACCACTCTTCCAGTGTTTCTTGCTGTTGGAAATTCATCTTCCATGATGATCCTTGCTATCATAGTGCTGCTATTCAGCACAATAACCGTGATGACTTCGTTGGTAGCTTTATCGTTCTACGGTGCGAGTCAGCTCAAGTTTCACTGGGTTGAACGCTATGACAAGCTTCTTGTAGGTTCGGTGCTGTGCGTGGTAGGTATTCTGACTCTCATCTTTCACGACCACGAGCACGACCACCACGGTCATGGAGGTTCCATAGGAGACAATTTGCATAGGAAAATTATTGTACTTTGAGGATTCTTCATATTATATCTTATATCCCTCAGACACTTATAATTTTGATCTTCTGGGAAATTTCAAGACTGACTTTGAAACCTTGTATTATATGTGAGCCCCAAGTGGTGGGTTTAAAGGTCAGTTTCTTGTATTCCTTTGTTGCTTTTGTCACATTTTAAGAATTTTTTTTCATGTATGATGAATAGAATGTTAACGTCCTGCATCATTACTTTGTATTTTCATCTTTCAAGGTGCATAAAATTGGTACTTTGACTTGTCGATCGAGCTCGACTTTTATACTTCTAGAGCCTATTTGGTATGACTTTTTAAGCGTTGGAATACTCTTTTTTATCCACCCGAAGAGT

Coding sequence (CDS)

ATGGAAGGTTTTACCGGAGAAGATCTGTCAACAATCGGAGGAATTGCGACCGTGTCGCTTCTGCATTCCTTCATTCCCACTCACTGGCTTCCTTTCTCCGTCGTCGGTCGCGTCCAGAAATGGACTCTCTCCAGGACTCTCCTCGTCACTGCTTTTGGAGCAATTTTACATGTCATATCGACTTCACTTCTTGGAATAACAGCAATCACGATGGCTAATACAATTGCCGGTGAAGAAACCGTGCACAAGCTGGCCTCTCTTTTGCTTATAGTTCTTGGAGGTTGTTATGTTCTGTTGTTTATGACTGGTAGAGGTAGTCATAGTCACTCCCATAACCAACCGATGGAGAAAATGGCTGTTGCTGGTCTTGTCCTTGTACCTGCTTTATCTCCTTGTGCAACCACTCTTCCAGTGTTTCTTGCTGTTGGAAATTCATCTTCCATGATGATCCTTGCTATCATAGTGCTGCTATTCAGCACAATAACCGTGATGACTTCGTTGGTAGCTTTATCGTTCTACGGTGCGAGTCAGCTCAAGTTTCACTGGGTTGAACGCTATGACAAGCTTCTTGTAGGTTCGGTGCTGTGCGTGGTAGGTATTCTGACTCTCATCTTTCACGACCACGAGCACGACCACCACGGTCATGGAGGTTCCATAGGAGACAATTTGCATAGGAAAATTATTGTACTTTGA

Protein sequence

MEGFTGEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYVLLFMTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMILAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCVVGILTLIFHDHEHDHHGHGGSIGDNLHRKIIVL

Homology

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BLAST of Cp4.1LG18g01140 vs. TrEMBL
Match: A0A0A0LZF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600990 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 6.2e-119
Identity = 223/230 (96.96%), Postives = 227/230 (98.70%), Query Frame = 1


Query: 1   MEGFTGEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           MEGFT EDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS
Sbjct: 1   MEGFTAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYVLLFMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVH+LASLLLI+LG CYVLLFMTGRGSHSHS NQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHQLASLLLIILGACYVLLFMTGRGSHSHSQNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMILAIIVLLFSTITVMTSLVALSFYGASQLKF 180
           AGLVLVPALSPCATTLPVFLAVGNSSSMM+LAIIVLLFSTITVMTSLVALSFYGASQLKF
Sbjct: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHDHHGHGGSIGDNLHRKIIVL 231
           HWVERYDKLLVGSVLCVVGILTLIFHDHEHDHHGHGGS+GDNLHRKIIVL
Sbjct: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHDHHGHGGSVGDNLHRKIIVL 230

[Close]

BLAST of Cp4.1LG18g01140 vs. TrEMBL
Match: B9HQ56_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s16040g PE=4 SV=2)

HSP 1 Score: 407.1 bits (1045), Expect = 1.4e-110
Identity = 205/230 (89.13%), Postives = 221/230 (96.09%), Query Frame = 1


Query: 1   MEGFTGEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           ME FT EDLSTIGGIATVSLLHSFIPTHWLPFS+VGR QKWTLSRTLLVTAFGA+LHV+S
Sbjct: 1   MESFTAEDLSTIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSRTLLVTAFGAVLHVLS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYVLLFMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVHKLASLLLI+LGGCY++LF++G+G HSHSHNQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHKLASLLLIILGGCYMILFLSGKGGHSHSHNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMILAIIVLLFSTITVMTSLVALSFYGASQLKF 180
           AGLVLVPALSPCATTLPVFLAVGNSSSMM+LAIIVLLFSTITVMTSLVALSFYGASQLKF
Sbjct: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHDHHGHGGSIGDNLHRKIIVL 231
           HWVERYDKLLVGSVLC+VGILTLIFHDH+HDH GHG   G++L+RK+I L
Sbjct: 181 HWVERYDKLLVGSVLCLVGILTLIFHDHDHDHQGHGDFSGEHLNRKLIGL 230

[Close]

BLAST of Cp4.1LG18g01140 vs. TrEMBL
Match: I3SQP0_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.6e-106
Identity = 201/231 (87.01%), Postives = 217/231 (93.94%), Query Frame = 1


Query: 1   MEGFTGEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           M GFT EDLSTIGGIATVS+LHSFIPTHWLPFS+VGR QKWTLSRTLLVTA GAILHVIS
Sbjct: 1   MAGFTAEDLSTIGGIATVSILHSFIPTHWLPFSIVGRAQKWTLSRTLLVTALGAILHVIS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYVLLFMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVHKLASLLL+ LGG YVLLF  G+G HSHSHNQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHKLASLLLVFLGGSYVLLFFMGKGGHSHSHNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMILAIIVLLFSTITVMTSLVALSFYGASQLKF 180
           AGL+LVPALSPCATTLPVFLAVG+SSSMM+LAIIVLLFSTI+VMTSLVALSFYGASQLKF
Sbjct: 121 AGLILVPALSPCATTLPVFLAVGSSSSMMVLAIIVLLFSTISVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHDH-HGHGGSIGDNLHRKIIVL 231
           HWVERYDKLLVGSVLC+VG+LTLIFH H+HDH HG  GS+G+++HRK+I L
Sbjct: 181 HWVERYDKLLVGSVLCLVGVLTLIFHHHDHDHDHGKVGSVGEHIHRKLISL 231

[Close]

BLAST of Cp4.1LG18g01140 vs. TrEMBL
Match: B9MYS1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s20750g PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 3.5e-106
Identity = 201/230 (87.39%), Postives = 218/230 (94.78%), Query Frame = 1


Query: 1   MEGFTGEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           ME F+ EDLSTIGGIATVSLLHSFIPTHWLPFS+VGR QKWTLSRTLLVTA GA+LHV+S
Sbjct: 1   MESFSAEDLSTIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSRTLLVTASGAVLHVLS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYVLLFMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYV+LF++G+G HSHSHNQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYVILFLSGKGGHSHSHNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMILAIIVLLFSTITVMTSLVALSFYGASQLKF 180
            GL+LVPALSPCATTLPVFLAVG+SSSMM+LAIIVLLFSTITVMTSLVALSFYGASQLKF
Sbjct: 121 VGLILVPALSPCATTLPVFLAVGSSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHDHHGHGGSIGDNLHRKIIVL 231
           HWVERYDKLLVGSVLC+VGILTL+FHDH H+  GHGG  G++L+RKII L
Sbjct: 181 HWVERYDKLLVGSVLCMVGILTLMFHDHNHE--GHGGFSGEHLNRKIIGL 228

[Close]

BLAST of Cp4.1LG18g01140 vs. TrEMBL
Match: D7T1H9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g01580 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 4.6e-106
Identity = 200/230 (86.96%), Postives = 215/230 (93.48%), Query Frame = 1


Query: 1   MEGFTGEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           ME FT EDLS IGGIATVSLLHSFIPTHWLPFS+VGR QKWTLS+TL VTAFGAILHVIS
Sbjct: 1   MEAFTAEDLSKIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSKTLFVTAFGAILHVIS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYVLLFMTGRGSHSHSHNQPMEKMAV 120
           TSLLG+TAITMAN+IAGEETVHKLASLLL++LGG Y+LLF+ G+G HSHSHNQPMEKMAV
Sbjct: 61  TSLLGVTAITMANSIAGEETVHKLASLLLVILGGSYILLFLAGKGGHSHSHNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMILAIIVLLFSTITVMTSLVALSFYGASQLKF 180
           AGLVLVPALSPCATTLPVFLAVGNSSSMM+LAIIVLLFSTITVMTSLVALSFYGASQLKF
Sbjct: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHDHHGHGGSIGDNLHRKIIVL 231
           HWVERYDKLLVGSVLC+VG+LTLIFHDH+HD  GHG S    L+RK+IVL
Sbjct: 181 HWVERYDKLLVGSVLCLVGVLTLIFHDHDHD--GHGSSTAGQLNRKLIVL 228

[Close]

BLAST of Cp4.1LG18g01140 vs. TAIR10
Match: AT5G21070.1 (AT5G21070.1 unknown protein)

HSP 1 Score: 383.3 bits (983), Expect = 1.1e-106
Identity = 199/230 (86.52%), Postives = 210/230 (91.30%), Query Frame = 1


Query: 1   MEGFTGEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           M+ FT EDLSTIGGIATVSLLHSFIPTHWLPFS+VGR QKWTLSRTLLVTAFGA+LHVIS
Sbjct: 1   MDTFTAEDLSTIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSRTLLVTAFGAVLHVIS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYVLLFMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVHKLASLLL+ LGG YVLLF+ G+G H+HSHNQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHKLASLLLVFLGGSYVLLFLAGKGGHTHSHNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMILAIIVLLFSTITVMTSLVALSFYGASQLKF 180
           AGLVLVPALSPCATTLPVFLAVGNS SMM+LAIIVLLFSTI VMTSLVALSFYGASQLKF
Sbjct: 121 AGLVLVPALSPCATTLPVFLAVGNSKSMMVLAIIVLLFSTILVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHDHHGHGGSIGDNLHRKIIVL 231
           HWVERYDKLLVGSVLC+VGILTL+FHDH+     HGG     LHRKII L
Sbjct: 181 HWVERYDKLLVGSVLCLVGILTLLFHDHD-----HGGHEAHQLHRKIITL 225

[Close]

BLAST of Cp4.1LG18g01140 vs. NCBI nr
Match: gi|449452700|ref|XP_004144097.1| (PREDICTED: uncharacterized protein LOC101203325 [Cucumis sativus])

HSP 1 Score: 434.9 bits (1117), Expect = 8.9e-119
Identity = 223/230 (96.96%), Postives = 227/230 (98.70%), Query Frame = 1


Query: 1   MEGFTGEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           MEGFT EDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS
Sbjct: 1   MEGFTAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYVLLFMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVH+LASLLLI+LG CYVLLFMTGRGSHSHS NQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHQLASLLLIILGACYVLLFMTGRGSHSHSQNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMILAIIVLLFSTITVMTSLVALSFYGASQLKF 180
           AGLVLVPALSPCATTLPVFLAVGNSSSMM+LAIIVLLFSTITVMTSLVALSFYGASQLKF
Sbjct: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHDHHGHGGSIGDNLHRKIIVL 231
           HWVERYDKLLVGSVLCVVGILTLIFHDHEHDHHGHGGS+GDNLHRKIIVL
Sbjct: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHDHHGHGGSVGDNLHRKIIVL 230

[Close]

BLAST of Cp4.1LG18g01140 vs. NCBI nr
Match: gi|659100415|ref|XP_008451088.1| (PREDICTED: uncharacterized protein LOC103492468 isoform X1 [Cucumis melo])

HSP 1 Score: 430.6 bits (1106), Expect = 1.7e-117
Identity = 221/230 (96.09%), Postives = 226/230 (98.26%), Query Frame = 1


Query: 1   MEGFTGEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           MEGFT EDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS
Sbjct: 1   MEGFTAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYVLLFMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVH+LASLLLI+LG CYVLLFMTGRGSHSHSHNQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHQLASLLLIILGACYVLLFMTGRGSHSHSHNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMILAIIVLLFSTITVMTSLVALSFYGASQLKF 180
           AGLVLVPALSPCATTLPVFLAVGNSSSMM+LAIIVLLFSTITVMTSLVALSFYGASQLKF
Sbjct: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHDHHGHGGSIGDNLHRKIIVL 231
           HWVERYDKLLVGSVLCVVGILTLIFHDHEH+ HGHGGS+GD LHRKIIVL
Sbjct: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHNQHGHGGSVGDTLHRKIIVL 230

[Close]

BLAST of Cp4.1LG18g01140 vs. NCBI nr
Match: gi|566188267|ref|XP_002313616.2| (hypothetical protein POPTR_0009s16040g [Populus trichocarpa])

HSP 1 Score: 407.1 bits (1045), Expect = 2.0e-110
Identity = 205/230 (89.13%), Postives = 221/230 (96.09%), Query Frame = 1


Query: 1   MEGFTGEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           ME FT EDLSTIGGIATVSLLHSFIPTHWLPFS+VGR QKWTLSRTLLVTAFGA+LHV+S
Sbjct: 1   MESFTAEDLSTIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSRTLLVTAFGAVLHVLS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYVLLFMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVHKLASLLLI+LGGCY++LF++G+G HSHSHNQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHKLASLLLIILGGCYMILFLSGKGGHSHSHNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMILAIIVLLFSTITVMTSLVALSFYGASQLKF 180
           AGLVLVPALSPCATTLPVFLAVGNSSSMM+LAIIVLLFSTITVMTSLVALSFYGASQLKF
Sbjct: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHDHHGHGGSIGDNLHRKIIVL 231
           HWVERYDKLLVGSVLC+VGILTLIFHDH+HDH GHG   G++L+RK+I L
Sbjct: 181 HWVERYDKLLVGSVLCLVGILTLIFHDHDHDHQGHGDFSGEHLNRKLIGL 230

[Close]

BLAST of Cp4.1LG18g01140 vs. NCBI nr
Match: gi|502098194|ref|XP_004491176.1| (PREDICTED: uncharacterized protein LOC101511291 [Cicer arietinum])

HSP 1 Score: 397.9 bits (1021), Expect = 1.2e-107
Identity = 203/233 (87.12%), Postives = 219/233 (93.99%), Query Frame = 1


Query: 1   MEGFTGEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           ME F+ EDLSTIGGIATVS+LHSFIPTHWLPFS+VGR QKWTLSRTLLVTAFGAILHVIS
Sbjct: 1   MESFSAEDLSTIGGIATVSILHSFIPTHWLPFSIVGRAQKWTLSRTLLVTAFGAILHVIS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYVLLFMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVHKLASLLL+ LGG Y++LF+ G+G HSHSHNQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHKLASLLLVFLGGMYIILFVMGKGGHSHSHNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMILAIIVLLFSTITVMTSLVALSFYGASQLKF 180
           AGL+LVPALSPCATTLPVFLAVGNSSSMM+LAIIVLLFSTI+VMTSLVALSFYGASQLKF
Sbjct: 121 AGLILVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTISVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHDH---HGHGGSIGDNLHRKIIVL 231
           HWVERYDKLLVGSVLC+VG+LTLIFHDHEHDH   HG   S+G++LHRKII L
Sbjct: 181 HWVERYDKLLVGSVLCLVGLLTLIFHDHEHDHSLNHGEVASVGEHLHRKIISL 233

[Close]

BLAST of Cp4.1LG18g01140 vs. NCBI nr
Match: gi|743796811|ref|XP_011006417.1| (PREDICTED: uncharacterized protein LOC105112413 [Populus euphratica])

HSP 1 Score: 396.0 bits (1016), Expect = 4.6e-107
Identity = 201/228 (88.16%), Postives = 218/228 (95.61%), Query Frame = 1


Query: 1   MEGFTGEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           ME F+ EDLSTIGGIATVSLLHSFIPTHWLPFS+VGR QKWTLSRTLLVTAFGA+LHV+S
Sbjct: 1   MESFSAEDLSTIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSRTLLVTAFGAVLHVLS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYVLLFMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYV+LF++G+G HSHSHNQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYVILFLSGKGGHSHSHNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMILAIIVLLFSTITVMTSLVALSFYGASQLKF 180
            GL+LVPALSPCATTLPVFLAVG+SSSMM+LAIIVLLFST+TVMTSLVALSFYGASQLKF
Sbjct: 121 VGLILVPALSPCATTLPVFLAVGSSSSMMVLAIIVLLFSTVTVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHDHHGHGGSIGDNLHRKII 229
           HWVERYDKLLVGSVLC+VGILTL+FHDH H+  GHGG  GD+L+RKII
Sbjct: 181 HWVERYDKLLVGSVLCMVGILTLMFHDHNHE--GHGGFSGDHLNRKII 226

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g01140 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG18g01140 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZF1_CUCSA	6.2e-119	96.96	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600990 PE=4 SV=1	[more]
B9HQ56_POPTR	1.4e-110	89.13	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s16040g PE=4 SV=2	[more]
I3SQP0_LOTJA	1.6e-106	87.01	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
B9MYS1_POPTR	3.5e-106	87.39	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s20750g PE=4 SV=1	[more]
D7T1H9_VITVI	4.6e-106	86.96	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g01580 PE=4 SV=...	[more]

BLAST of Cp4.1LG18g01140 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G21070.1	1.1e-106	86.52	unknown protein	[more]

BLAST of Cp4.1LG18g01140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452700\|ref\|XP_004144097.1\|	8.9e-119	96.96	PREDICTED: uncharacterized protein LOC101203325 [Cucumis sativus]	[more]
gi\|659100415\|ref\|XP_008451088.1\|	1.7e-117	96.09	PREDICTED: uncharacterized protein LOC103492468 isoform X1 [Cucumis melo]	[more]
gi\|566188267\|ref\|XP_002313616.2\|	2.0e-110	89.13	hypothetical protein POPTR_0009s16040g [Populus trichocarpa]	[more]
gi\|502098194\|ref\|XP_004491176.1\|	1.2e-107	87.12	PREDICTED: uncharacterized protein LOC101511291 [Cicer arietinum]	[more]
gi\|743796811\|ref\|XP_011006417.1\|	4.6e-107	88.16	PREDICTED: uncharacterized protein LOC105112413 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g01140.1	Cp4.1LG18g01140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36394	FAMILY NOT NAMED	coord: 1..230 score: 7.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG18g01140	Cucsa.142710	Cucumber (Gy14) v1	cgycpeB0382
Cp4.1LG18g01140	CmoCh10G010300	Cucurbita moschata (Rifu)	cmocpeB055
Cp4.1LG18g01140	Cla011072	Watermelon (97103) v1	cpewmB355
Cp4.1LG18g01140	Csa1G600990	Cucumber (Chinese Long) v2	cpecuB349
Cp4.1LG18g01140	MELO3C015629	Melon (DHL92) v3.5.1	cpemeB329
Cp4.1LG18g01140	ClCG03G014150	Watermelon (Charleston Gray)	cpewcgB327
Cp4.1LG18g01140	CSPI01G29670	Wild cucumber (PI 183967)	cpecpiB350
Cp4.1LG18g01140	MELO3C015629.2	Melon (DHL92) v3.6.1	cpemedB387
Cp4.1LG18g01140	CsaV3_1G042110	Cucumber (Chinese Long) v3	cpecucB0428
Cp4.1LG18g01140	Bhi02G001407	Wax gourd	cpewgoB0460
Cp4.1LG18g01140	CsGy1G028980	Cucumber (Gy14) v2	cgybcpeB039
Cp4.1LG18g01140	Carg16980	Silver-seed gourd	carcpeB0655

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG18g01140	Cucurbita pepo (Zucchini)	cpecpeB363
Cp4.1LG18g01140	Cucurbita pepo (Zucchini)	cpecpeB369
Cp4.1LG18g01140	Cucurbita maxima (Rimu)	cmacpeB080
Cp4.1LG18g01140	Cucurbita maxima (Rimu)	cmacpeB126
Cp4.1LG18g01140	Cucurbita maxima (Rimu)	cmacpeB567
Cp4.1LG18g01140	Cucurbita maxima (Rimu)	cmacpeB632
Cp4.1LG18g01140	Cucurbita moschata (Rifu)	cmocpeB104
Cp4.1LG18g01140	Bottle gourd (USVL1VR-Ls)	cpelsiB299
Cp4.1LG18g01140	Silver-seed gourd	carcpeB0247
Cp4.1LG18g01140	Silver-seed gourd	carcpeB0735