Cp4.1LG17g10880 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG17g10880
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGUN4-like protein
LocationCp4.1LG17 : 8301311 .. 8302102 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCTTCCCAGTCTCTCCCATCTTTCCGCCACTCTCTCCGCCGCCGCCTCCACCACCCTAATGTCTCTTCCACCCCTCTCCCCTCCACCTCTCTTTACCTCAAACCAACCCCCACCGCCGCCACCACTGGCACTGCTACTGCTACTGCCATTGCCACCTCCTCTCTCTCCGCTGCCGCCGCTGGTTCCTTCCCTCTCTCCACAGACACCACCTCAGCCATCTCCTTCGACGAGCTCGACCGCCTCCTCGCGGCCAAAAACTTCCGTCAAGCCGATGAGGAAACTCGCCGGCTTCTGATCGCCCTCGCCGGCGAAGCTGCACAGAAACGAGGCTACGTCTACTTCTCGGAAGTGCAATTCATCGCCGCCGACGATTTGAAAGCCATAGACGACCTCTGGCAGAAATACAGCGACGGGAAATTCGGGTACAGCGTACAGAAACGGATATTCGAGAAAATGAACGGAGATTTCACGCAGCTGTTCAAGAAACTTGGATGGATGAAGAAATTGGATACCGAAATAGAGCAGTACAATTACAGAGCATTTCCGACGGAGTTCATTTGGGAGCTGACGGAGGAGACGCCGGAGGGACATCTTCCATTGACGAATGCCTTGAGAGGGACGCAGTTAATGAGCAAAATTCTGAGCCATCCGGCATTTGGGGACGCCATTGAAGGAGAAATTGAAGAAAAAAGGGAAGAAAAAGTTGCAGAGGACGCCATTGGAGGGTTGAAGAAGGGGTTGAAATCGATGAGCGACAGGCTTTTCAAAAGGGATTATAGCTTTTGA

mRNA sequence

ATGGCAGCTTCCCAGTCTCTCCCATCTTTCCGCCACTCTCTCCGCCGCCGCCTCCACCACCCTAATGTCTCTTCCACCCCTCTCCCCTCCACCTCTCTTTACCTCAAACCAACCCCCACCGCCGCCACCACTGGCACTGCTACTGCTACTGCCATTGCCACCTCCTCTCTCTCCGCTGCCGCCGCTGGTTCCTTCCCTCTCTCCACAGACACCACCTCAGCCATCTCCTTCGACGAGCTCGACCGCCTCCTCGCGGCCAAAAACTTCCGTCAAGCCGATGAGGAAACTCGCCGGCTTCTGATCGCCCTCGCCGGCGAAGCTGCACAGAAACGAGGCTACGTCTACTTCTCGGAAGTGCAATTCATCGCCGCCGACGATTTGAAAGCCATAGACGACCTCTGGCAGAAATACAGCGACGGGAAATTCGGGTACAGCGTACAGAAACGGATATTCGAGAAAATGAACGGAGATTTCACGCAGCTGTTCAAGAAACTTGGATGGATGAAGAAATTGGATACCGAAATAGAGCAGTACAATTACAGAGCATTTCCGACGGAGTTCATTTGGGAGCTGACGGAGGAGACGCCGGAGGGACATCTTCCATTGACGAATGCCTTGAGAGGGACGCAGTTAATGAGCAAAATTCTGAGCCATCCGGCATTTGGGGACGCCATTGAAGGAGAAATTGAAGAAAAAAGGGAAGAAAAAGTTGCAGAGGACGCCATTGGAGGGTTGAAGAAGGGGTTGAAATCGATGAGCGACAGGCTTTTCAAAAGGGATTATAGCTTTTGA

Coding sequence (CDS)

ATGGCAGCTTCCCAGTCTCTCCCATCTTTCCGCCACTCTCTCCGCCGCCGCCTCCACCACCCTAATGTCTCTTCCACCCCTCTCCCCTCCACCTCTCTTTACCTCAAACCAACCCCCACCGCCGCCACCACTGGCACTGCTACTGCTACTGCCATTGCCACCTCCTCTCTCTCCGCTGCCGCCGCTGGTTCCTTCCCTCTCTCCACAGACACCACCTCAGCCATCTCCTTCGACGAGCTCGACCGCCTCCTCGCGGCCAAAAACTTCCGTCAAGCCGATGAGGAAACTCGCCGGCTTCTGATCGCCCTCGCCGGCGAAGCTGCACAGAAACGAGGCTACGTCTACTTCTCGGAAGTGCAATTCATCGCCGCCGACGATTTGAAAGCCATAGACGACCTCTGGCAGAAATACAGCGACGGGAAATTCGGGTACAGCGTACAGAAACGGATATTCGAGAAAATGAACGGAGATTTCACGCAGCTGTTCAAGAAACTTGGATGGATGAAGAAATTGGATACCGAAATAGAGCAGTACAATTACAGAGCATTTCCGACGGAGTTCATTTGGGAGCTGACGGAGGAGACGCCGGAGGGACATCTTCCATTGACGAATGCCTTGAGAGGGACGCAGTTAATGAGCAAAATTCTGAGCCATCCGGCATTTGGGGACGCCATTGAAGGAGAAATTGAAGAAAAAAGGGAAGAAAAAGTTGCAGAGGACGCCATTGGAGGGTTGAAGAAGGGGTTGAAATCGATGAGCGACAGGCTTTTCAAAAGGGATTATAGCTTTTGA

Protein sequence

MAASQSLPSFRHSLRRRLHHPNVSSTPLPSTSLYLKPTPTAATTGTATATAIATSSLSAAAAGSFPLSTDTTSAISFDELDRLLAAKNFRQADEETRRLLIALAGEAAQKRGYVYFSEVQFIAADDLKAIDDLWQKYSDGKFGYSVQKRIFEKMNGDFTQLFKKLGWMKKLDTEIEQYNYRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSKILSHPAFGDAIEGEIEEKREEKVAEDAIGGLKKGLKSMSDRLFKRDYSF
Homology
[Close]
BLAST of Cp4.1LG17g10880 vs. Swiss-Prot
Match: GUN4C_ARATH (Tetrapyrrole-binding protein, chloroplastic OS=Arabidopsis thaliana GN=GUN4 PE=1 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.9e-57
Identity = 140/273 (51.28%), Postives = 182/273 (66.67%), Query Frame = 1 

Query: 1   MAASQSLPSFRHSLRRRLHHPNV--SSTPLPSTSLYLKPTPTAATTG---TATATAIATS 60
           MA + SL    HS     HH N     +    TSL LK   +AAT     +A++T+ +T+
Sbjct: 1   MATTNSLHHHHHSSPSYTHHRNNLHCQSHFGPTSLSLKQPTSAATFSLICSASSTSSSTT 60

Query: 61  SLSAAAAGSFPLSTDTTSAISFDELDRLLAAKNFRQADEETRRLLIALAGEAAQKRGYVY 120
           ++SA +  +   +T  T+ I FD L+  L  +NFRQADEETRRLLI ++GEAA KRGYV+
Sbjct: 61  AVSAVSTTNASATTAETATI-FDVLENHLVNQNFRQADEETRRLLIQISGEAAVKRGYVF 120

Query: 121 FSEVQFIAADDLKAIDDLWQKYSDGKFGYSVQKRIFEKMNGDFTQLFKKLGWMKKLDTEI 180
           FSEV+ I+ +DL+AID+LW K+SDG+FGYSVQ++I+ K+  DFT+ F K+ WMK LDTE+
Sbjct: 121 FSEVKTISPEDLQAIDNLWIKHSDGRFGYSVQRKIWLKVKKDFTRFFVKVEWMKLLDTEV 180

Query: 181 EQYNYRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSKILSHPAFGDAIE--GEIEEKR 240
            QYNYRAFP EF WEL +ETP GHLPLTNALRGTQL+  +LSHPAF  A +  GE E++ 
Sbjct: 181 VQYNYRAFPDEFKWELNDETPLGHLPLTNALRGTQLLKCVLSHPAFATADDNSGETEDEL 240

Query: 241 EEKVA---EDAIGGLKKGLKSMSDRLFKRDYSF 264
              VA   E A  G  K       R+FK +YSF
Sbjct: 241 NRGVAVAKEQAGVGADK-------RVFKTNYSF 265

[Close]
BLAST of Cp4.1LG17g10880 vs. Swiss-Prot
Match: YCF53_PYRYE (Uncharacterized protein ycf53 OS=Pyropia yezoensis GN=ycf53 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.3e-22
Identity = 56/147 (38.10%), Postives = 92/147 (62.59%), Query Frame = 1 

Query: 75  ISFDELDRLLAAKNFRQADEETRRLLIALAGEAAQKRGYVYFSEVQFIAADDLKAIDDLW 134
           +++ +L  LL  ++  +AD+ T++ LI LAG  AQ R ++YF++++ I A DL+ ID LW
Sbjct: 97  MNYKDLQMLLTHRDLLKADQLTQQKLIQLAGVNAQTRNWLYFTDIKKIPAQDLQTIDKLW 156

Query: 135 QKYSDGKFGYSVQKRIFEKMNGDFTQLFKKLGWMKKLDTEIEQYNYRAFPTEFIWELTEE 194
             +S GKFG  VQ++I+  +  D+ + ++K+GW      E+++   R +P EF W     
Sbjct: 157 HTHSKGKFGLFVQRQIWLSVGKDWGKFWQKIGW------EVDRIPCR-YPEEFQW--NSH 216

Query: 195 TPEGHLPLTNALRGTQLMSKILSHPAF 222
            P GHLPL N LRG Q++S + +H A+
Sbjct: 217 GPRGHLPLFNQLRGVQVLSALFTHKAW 234

[Close]
BLAST of Cp4.1LG17g10880 vs. Swiss-Prot
Match: YCF53_PORPU (Uncharacterized protein ycf53 OS=Porphyra purpurea GN=ycf53 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.2e-22
Identity = 60/159 (37.74%), Postives = 94/159 (59.12%), Query Frame = 1 

Query: 63  GSFPLSTDTTSAISFDELDRLLAAKNFRQADEETRRLLIALAGEAAQKRGYVYFSEVQFI 122
           G  PL ++    + + +L  LL   N   AD+ T++ LI LAG   + R ++YF++++ I
Sbjct: 88  GIVPLKSN--KQMDYQDLQILLVQNNLIAADKLTQQKLIKLAGVDEKSRNWLYFTDIKKI 147

Query: 123 AADDLKAIDDLWQKYSDGKFGYSVQKRIFEKMNGDFTQLFKKLGWMKKLDTEIEQYNYRA 182
             +DL+ ID LW  +S GKFG+ VQ++I+  +  ++ Q + K+GW      EI +   R 
Sbjct: 148 PVEDLQTIDQLWNAHSKGKFGFFVQRQIWLALEKNWEQFWYKIGW------EINRVPCR- 207

Query: 183 FPTEFIWELTEETPEGHLPLTNALRGTQLMSKILSHPAF 222
           +P EF W  T   P+GHLPL N LRG Q++S + SH A+
Sbjct: 208 YPEEFHWNST--GPKGHLPLCNQLRGVQVLSALFSHKAW 235

[Close]
BLAST of Cp4.1LG17g10880 vs. Swiss-Prot
Match: YCF53_CYACA (Uncharacterized protein ycf53 OS=Cyanidium caldarium GN=ycf53 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 6.8e-22
Identity = 50/142 (35.21%), Postives = 89/142 (62.68%), Query Frame = 1 

Query: 77  FDELDRLLAAKNFRQADEETRRLLIALAGEAAQKRGYVYFSEVQFIAADDLKAIDDLWQK 136
           ++ L+ LL+A NF +A++ T+++L+ LAGE +++R ++YF++V  I    +  ++ LW+ 
Sbjct: 102 YETLESLLSANNFFEANKFTQQILLELAGEQSKQRNWMYFTDVHSINHQSVSDLNHLWEL 161

Query: 137 YSDGKFGYSVQKRIFEKMNGDFTQLFKKLGWMKKLDTEIEQYNYRAFPTEFIWELTEETP 196
           YS G FG+S+QKRI+  +N ++ + +KK+GW+           +  +P EF+W +    P
Sbjct: 162 YSQGNFGFSIQKRIWISVNKNWKKFWKKIGWIN------SNSKWLKYPGEFMWAV--NAP 221

Query: 197 EGHLPLTNALRGTQLMSKILSH 219
            GHLPL N LRG  ++  I  +
Sbjct: 222 PGHLPLFNQLRGVYVLEFIFDY 235

[Close]
BLAST of Cp4.1LG17g10880 vs. Swiss-Prot
Match: YC53L_SYNY3 (Ycf53-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0558 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-21
Identity = 59/159 (37.11%), Postives = 89/159 (55.97%), Query Frame = 1 

Query: 63  GSFPLSTDTTSAISFDELDRLLAAKNFRQADEETRRLLIALAGEAAQKRGYVYFSEVQFI 122
           G FPL +     I +  L   L +++F  ADE TR  L  LAG  A +R ++YF+EV+  
Sbjct: 81  GIFPLQS--AQGIDYLPLQEALGSQDFETADEITRDKLCELAGPGASQRQWLYFTEVEKF 140

Query: 123 AADDLKAIDDLWQKYSDGKFGYSVQKRIFEKMNGDFTQLFKKLGWMKKLDTEIEQYNYRA 182
            A DL  I+ LW  +S+G FG+SVQ+R++     +FT+L+ K+GW            +  
Sbjct: 141 PALDLHTINALWWLHSNGNFGFSVQRRLWLASGKEFTKLWPKIGWK-------SGNVWTR 200

Query: 183 FPTEFIWELTEETPEGHLPLTNALRGTQLMSKILSHPAF 222
           +P  F W+L+   P+GHLPL N LRG ++   +  HP +
Sbjct: 201 WPKGFTWDLS--APQGHLPLLNQLRGVRVAESLYRHPVW 228

[Close]
BLAST of Cp4.1LG17g10880 vs. TrEMBL
Match: A0A0A0KCD2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G042370 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 3.9e-101
Identity = 210/265 (79.25%), Postives = 228/265 (86.04%), Query Frame = 1 

Query: 1   MAASQSLPSFRHSLRRRLHHPNVSSTPLPSTS-LYLKPTPTAATTGTATATAIATSSLSA 60
           MA S SLPS RHSLR   H PN+S T   S+S L+LKPT + A T T T TA ATSSLSA
Sbjct: 1   MATSHSLPSLRHSLRHP-HRPNLSPTSFSSSSTLFLKPTSSTAVTTTTTTTA-ATSSLSA 60

Query: 61  AAAGSFPLSTDTTSAISFDELDRLLAAKNFRQADEETRRLLIALAGEAAQKRGYVYFSEV 120
           AAAGSF LS+DT+SAISFDELDRLL AK+FRQADEETRRLLIALAGE A KRGYVYFSEV
Sbjct: 61  AAAGSFSLSSDTSSAISFDELDRLLGAKDFRQADEETRRLLIALAGEGALKRGYVYFSEV 120

Query: 121 QFIAADDLKAIDDLWQKYSDGKFGYSVQKRIFEKMNGDFTQLFKKLGWMKKLDTEIEQYN 180
           QFIAA+DLKAIDDLWQK+SDGKFGYSVQKRIFEK+N DFT+LF KLGWMKKLDTEIEQYN
Sbjct: 121 QFIAAEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYN 180

Query: 181 YRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSKILSHPAFGDAIEGEIEEKREEKVAE 240
           YRAFPTEFIWELTE+TPEGHLPLTNALRGT+LMS IL+HPAFG   E  IEEK EEK+A 
Sbjct: 181 YRAFPTEFIWELTEDTPEGHLPLTNALRGTRLMSNILNHPAFG---EEAIEEKGEEKIAG 240

Query: 241 DA-IGGLKKGLKSMSDRLFKRDYSF 264
               GGLKKGLKS+++RLFKRDYSF
Sbjct: 241 VVENGGLKKGLKSITERLFKRDYSF 260

[Close]
BLAST of Cp4.1LG17g10880 vs. TrEMBL
Match: A5BEZ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0102g00310 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.8e-69
Identity = 151/267 (56.55%), Postives = 192/267 (71.91%), Query Frame = 1 

Query: 3   ASQSLPSF--RHSLRRRLHHPNVSSTPLPSTSLYLKPTPTAATTG---TATATAIATSSL 62
           A+ SL S    H L +  HH ++ S P   +SL+LKPT    TT    T T    AT++ 
Sbjct: 2   ATNSLQSLSNHHHLLKHYHHHSIESHPSTFSSLFLKPTTNTNTTNLSHTLTTPPTATTTT 61

Query: 63  SAAAAGSFPLSTDTTS-AISFDELDRLLAAKNFRQADEETRRLLIALAGEAAQKRGYVYF 122
             A + +   +T +TS AIS+D L + L++KN+RQADEETRRLLI LAGEAA KRGYV+F
Sbjct: 62  PFALSSTTSSTTPSTSQAISYDVLQQHLSSKNYRQADEETRRLLIVLAGEAAVKRGYVFF 121

Query: 123 SEVQFIAADDLKAIDDLWQKYSDGKFGYSVQKRIFEKMNGDFTQLFKKLGWMKKLDTEIE 182
           SEVQFI   DLKAID+LW+++S+ KFGYSVQ+RI+EK+N DF++ F K+GWMKKLDTE+E
Sbjct: 122 SEVQFIPEADLKAIDELWRQHSNNKFGYSVQRRIWEKVNKDFSRFFLKVGWMKKLDTEVE 181

Query: 183 QYNYRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSKILSHPAFGDAIEGEIEEKREEK 242
           QYNYRAFPTEF+WELT++TPEGHLPLTNALRGTQL++ +L HPAF    E E E   E+ 
Sbjct: 182 QYNYRAFPTEFMWELTDDTPEGHLPLTNALRGTQLLNCLLGHPAFQGNEEEEEEVAEEKG 241

Query: 243 VAEDAIGGLKKGLKSMSDRLFKRDYSF 264
                +G L+ G K +S  +FK DYSF
Sbjct: 242 SVNGGLGVLRDGSKPLSKSVFKPDYSF 268

[Close]
BLAST of Cp4.1LG17g10880 vs. TrEMBL
Match: A0A0D2VM76_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G142800 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.3e-68
Identity = 155/262 (59.16%), Postives = 190/262 (72.52%), Query Frame = 1 

Query: 12  HSLRRRLHHPNVSS---------TPLPSTSLYLKPTPTAATTGTATATAIATSSLSAAAA 71
           HSLR   HH + SS          P P +S +LKP P+++T+ + T T  + SS +  + 
Sbjct: 5   HSLRTLPHHHHSSSFKRLSTPPPPPPPPSSFFLKP-PSSSTSTSTTNTLSSLSSTTTFSL 64

Query: 72  GSFPLSTDTTSAISFDELDRLLAAKNFRQADEETRRLLIALAGEAAQKRGYVYFSEVQFI 131
            S   ST T+ AISFD L   L+ +NFRQADEETRRLLI LAGEAAQKRGYV+FSEVQFI
Sbjct: 65  PSSTTSTTTSQAISFDTLQHHLSNQNFRQADEETRRLLILLAGEAAQKRGYVFFSEVQFI 124

Query: 132 AADDLKAIDDLWQKYSDGKFGYSVQKRIFEKMNGDFTQLFKKLGWMKKLDTEIEQYNYRA 191
           + +DLKAID+LW+K+SD KFGYSVQKR ++K+  DFT+LF KLGWMKKLDTEIEQYNYRA
Sbjct: 125 SQNDLKAIDELWKKHSDNKFGYSVQKRQWQKVKKDFTKLFLKLGWMKKLDTEIEQYNYRA 184

Query: 192 FPTEFIWELTEETPEGHLPLTNALRGTQLMSKILSHPAFGDAIEGEIEEKREEKVAEDAI 251
           FP EFIWEL +ETPEGHLPLTNALRGTQL + ILSHPAF    EG+ E   E +  E+  
Sbjct: 185 FPDEFIWELNDETPEGHLPLTNALRGTQLFNSILSHPAF----EGQEE---EAETGENGG 244

Query: 252 GGLKKG-LKSMSDRLFKRDYSF 264
             ++ G  K +S++ FK +YSF
Sbjct: 245 VTVRDGTTKPLSNKFFKPNYSF 258

[Close]
BLAST of Cp4.1LG17g10880 vs. TrEMBL
Match: A0A061EJ50_THECC (Enzyme binding,tetrapyrrole binding OS=Theobroma cacao GN=TCM_020047 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.3e-68
Identity = 146/254 (57.48%), Postives = 188/254 (74.02%), Query Frame = 1 

Query: 16  RRLHHPNVSSTPLPSTSLYLKPTPTAA----TTGTATATAIATSSLSAAAAGSFPLSTDT 75
           R LHHP  SS    STS  + P P++     ++ T   ++  T SLS+  + S   +T T
Sbjct: 7   RYLHHPQYSSLKRLSTSESIPPPPSSLFIRPSSSTNNLSSTTTFSLSSTTS-STSSTTST 66

Query: 76  TSAISFDELDRLLAAKNFRQADEETRRLLIALAGEAAQKRGYVYFSEVQFIAADDLKAID 135
           +  ISFD L   L+ +NFRQADEETRRLLI LAGEAA+KRGYV+FSEVQFI+  DL AID
Sbjct: 67  SQPISFDALQHHLSTQNFRQADEETRRLLIVLAGEAAEKRGYVFFSEVQFISEADLIAID 126

Query: 136 DLWQKYSDGKFGYSVQKRIFEKMNGDFTQLFKKLGWMKKLDTEIEQYNYRAFPTEFIWEL 195
           DLW++YS  +FGYSVQKR+++K++ DFT+ F K+GWMKKLDTE+EQYNYRAFP EF+WEL
Sbjct: 127 DLWKQYSSNRFGYSVQKRLWQKVDKDFTKFFLKVGWMKKLDTEVEQYNYRAFPNEFMWEL 186

Query: 196 TEETPEGHLPLTNALRGTQLMSKILSHPAFGDAIEGEIEEKREEKVA--EDAIGGLKKGL 255
            +ETPEGHLPLTNALRGTQL++ ILSHPAF    EG+ +++ E +V   + A+ GL+ G 
Sbjct: 187 NDETPEGHLPLTNALRGTQLLNSILSHPAF----EGQEDDEEEGEVGGEDGAVKGLRDGA 246

Query: 256 KSMSDRLFKRDYSF 264
           K +S++ FK DYSF
Sbjct: 247 KPLSNKFFKPDYSF 255

[Close]
BLAST of Cp4.1LG17g10880 vs. TrEMBL
Match: A0A072ULR7_MEDTR (Tetrapyrrole-binding protein OS=Medicago truncatula GN=MTR_4g067150 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 7.4e-68
Identity = 150/266 (56.39%), Postives = 194/266 (72.93%), Query Frame = 1 

Query: 3   ASQSLPSFRH-SLRRRLHHPNVSSTPLP-STSLYLKPTPTAATTGTATATAIATSSLS-- 62
           A+ SL S +H SL +R ++P+ ++ P   S+SL+LKPT    T  T + ++ + SS++  
Sbjct: 2   ATNSLHSIQHHSLSKRHYYPSETAPPSTLSSSLFLKPTTINPTNITLSHSSSSNSSITFS 61

Query: 63  -AAAAGSFPLSTDTTSAISFDELDRLLAAKNFRQADEETRRLLIALAGEAAQKRGYVYFS 122
            +    S P ST  TS  SF+ L + L+AKNFR+ADEETRRLLI LAGEAAQKRGYV+FS
Sbjct: 62  ISQTTSSTPSSTSQTS--SFELLQQHLSAKNFREADEETRRLLIVLAGEAAQKRGYVFFS 121

Query: 123 EVQFIAADDLKAIDDLWQKYSDGKFGYSVQKRIFEKMNGDFTQLFKKLGWMKKLDTEIEQ 182
           EVQFI+ +DLK ID LW+ +SD KFGYSVQK++F K   DFT+ F K+GWMKKLDTE+EQ
Sbjct: 122 EVQFISEEDLKTIDQLWRDHSDNKFGYSVQKKLFGKAKKDFTKFFIKVGWMKKLDTEMEQ 181

Query: 183 YNYRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSKILSHPAFGDAIEGEIEEKREEKV 242
           YNYR+FPTEFIWEL ++TPEGHLPLTNALRGTQL+S I +HPAF D++  E+E       
Sbjct: 182 YNYRSFPTEFIWELNDDTPEGHLPLTNALRGTQLLSYIFNHPAF-DSVPDEVEVSFGSTE 241

Query: 243 AEDAIGGLKKGLKSMSDRLFKRDYSF 264
              A+ GLK   K ++ ++FK DYSF
Sbjct: 242 GNGALKGLKDSSKPLATKIFKTDYSF 264

[Close]
BLAST of Cp4.1LG17g10880 vs. TAIR10
Match: AT3G59400.1 (AT3G59400.1 enzyme binding;tetrapyrrole binding)

HSP 1 Score: 223.4 bits (568), Expect = 1.6e-58
Identity = 140/273 (51.28%), Postives = 182/273 (66.67%), Query Frame = 1 

Query: 1   MAASQSLPSFRHSLRRRLHHPNV--SSTPLPSTSLYLKPTPTAATTG---TATATAIATS 60
           MA + SL    HS     HH N     +    TSL LK   +AAT     +A++T+ +T+
Sbjct: 1   MATTNSLHHHHHSSPSYTHHRNNLHCQSHFGPTSLSLKQPTSAATFSLICSASSTSSSTT 60

Query: 61  SLSAAAAGSFPLSTDTTSAISFDELDRLLAAKNFRQADEETRRLLIALAGEAAQKRGYVY 120
           ++SA +  +   +T  T+ I FD L+  L  +NFRQADEETRRLLI ++GEAA KRGYV+
Sbjct: 61  AVSAVSTTNASATTAETATI-FDVLENHLVNQNFRQADEETRRLLIQISGEAAVKRGYVF 120

Query: 121 FSEVQFIAADDLKAIDDLWQKYSDGKFGYSVQKRIFEKMNGDFTQLFKKLGWMKKLDTEI 180
           FSEV+ I+ +DL+AID+LW K+SDG+FGYSVQ++I+ K+  DFT+ F K+ WMK LDTE+
Sbjct: 121 FSEVKTISPEDLQAIDNLWIKHSDGRFGYSVQRKIWLKVKKDFTRFFVKVEWMKLLDTEV 180

Query: 181 EQYNYRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSKILSHPAFGDAIE--GEIEEKR 240
            QYNYRAFP EF WEL +ETP GHLPLTNALRGTQL+  +LSHPAF  A +  GE E++ 
Sbjct: 181 VQYNYRAFPDEFKWELNDETPLGHLPLTNALRGTQLLKCVLSHPAFATADDNSGETEDEL 240

Query: 241 EEKVA---EDAIGGLKKGLKSMSDRLFKRDYSF 264
              VA   E A  G  K       R+FK +YSF
Sbjct: 241 NRGVAVAKEQAGVGADK-------RVFKTNYSF 265

[Close]
BLAST of Cp4.1LG17g10880 vs. NCBI nr
Match: gi|659089894|ref|XP_008445737.1| (PREDICTED: tetrapyrrole-binding protein, chloroplastic [Cucumis melo])

HSP 1 Score: 379.4 bits (973), Expect = 5.1e-102
Identity = 211/264 (79.92%), Postives = 228/264 (86.36%), Query Frame = 1 

Query: 1   MAASQSLPSFRHSLRRRLHHPNVSSTPLPSTS-LYLKPTPTAATTGTATATAIATSSLSA 60
           MAAS SLPS R SLR   H PN+S T   S+S L+LKP  TAA T T TA   ATSSLSA
Sbjct: 1   MAASHSLPSLRPSLRHP-HRPNLSPTSFSSSSTLFLKPASTAAVTTTTTA---ATSSLSA 60

Query: 61  AAAGSFPLSTDTTSAISFDELDRLLAAKNFRQADEETRRLLIALAGEAAQKRGYVYFSEV 120
           AAAGSF LS+DT+SAISFDELDRLLAAK+FR+ADEETRRLLIALAG+ A KRGYVYFSEV
Sbjct: 61  AAAGSFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEV 120

Query: 121 QFIAADDLKAIDDLWQKYSDGKFGYSVQKRIFEKMNGDFTQLFKKLGWMKKLDTEIEQYN 180
           QFIAA+DLKAIDDLWQK+SDGKFGYSVQKRIFEK+N DFT+LF KLGWMKKLDTEIEQYN
Sbjct: 121 QFIAAEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYN 180

Query: 181 YRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSKILSHPAFGDAIEGEIEEKREEKVAE 240
           YRAFPTEFIWELTEETPEGHLPLTNALRGTQLMS IL+HPAF    E  IEEK EEK+A 
Sbjct: 181 YRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFE---EDAIEEKGEEKIAG 240

Query: 241 DAIGGLKKGLKSMSDRLFKRDYSF 264
           D  GGLKKGLKS+++RLFKRDYSF
Sbjct: 241 DENGGLKKGLKSITERLFKRDYSF 257

[Close]
BLAST of Cp4.1LG17g10880 vs. NCBI nr
Match: gi|449446253|ref|XP_004140886.1| (PREDICTED: tetrapyrrole-binding protein, chloroplastic [Cucumis sativus])

HSP 1 Score: 375.9 bits (964), Expect = 5.6e-101
Identity = 210/265 (79.25%), Postives = 228/265 (86.04%), Query Frame = 1 

Query: 1   MAASQSLPSFRHSLRRRLHHPNVSSTPLPSTS-LYLKPTPTAATTGTATATAIATSSLSA 60
           MA S SLPS RHSLR   H PN+S T   S+S L+LKPT + A T T T TA ATSSLSA
Sbjct: 1   MATSHSLPSLRHSLRHP-HRPNLSPTSFSSSSTLFLKPTSSTAVTTTTTTTA-ATSSLSA 60

Query: 61  AAAGSFPLSTDTTSAISFDELDRLLAAKNFRQADEETRRLLIALAGEAAQKRGYVYFSEV 120
           AAAGSF LS+DT+SAISFDELDRLL AK+FRQADEETRRLLIALAGE A KRGYVYFSEV
Sbjct: 61  AAAGSFSLSSDTSSAISFDELDRLLGAKDFRQADEETRRLLIALAGEGALKRGYVYFSEV 120

Query: 121 QFIAADDLKAIDDLWQKYSDGKFGYSVQKRIFEKMNGDFTQLFKKLGWMKKLDTEIEQYN 180
           QFIAA+DLKAIDDLWQK+SDGKFGYSVQKRIFEK+N DFT+LF KLGWMKKLDTEIEQYN
Sbjct: 121 QFIAAEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYN 180

Query: 181 YRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSKILSHPAFGDAIEGEIEEKREEKVAE 240
           YRAFPTEFIWELTE+TPEGHLPLTNALRGT+LMS IL+HPAFG   E  IEEK EEK+A 
Sbjct: 181 YRAFPTEFIWELTEDTPEGHLPLTNALRGTRLMSNILNHPAFG---EEAIEEKGEEKIAG 240

Query: 241 DA-IGGLKKGLKSMSDRLFKRDYSF 264
               GGLKKGLKS+++RLFKRDYSF
Sbjct: 241 VVENGGLKKGLKSITERLFKRDYSF 260

[Close]
BLAST of Cp4.1LG17g10880 vs. NCBI nr
Match: gi|225433870|ref|XP_002265252.1| (PREDICTED: tetrapyrrole-binding protein, chloroplastic [Vitis vinifera])

HSP 1 Score: 270.8 bits (691), Expect = 2.5e-69
Identity = 151/267 (56.55%), Postives = 192/267 (71.91%), Query Frame = 1 

Query: 3   ASQSLPSF--RHSLRRRLHHPNVSSTPLPSTSLYLKPTPTAATTG---TATATAIATSSL 62
           A+ SL S    H L +  HH ++ S P   +SL+LKPT    TT    T T    AT++ 
Sbjct: 2   ATNSLQSLSNHHHLLKHYHHHSIESHPSTFSSLFLKPTTNTNTTNLSHTLTTPPTATTTT 61

Query: 63  SAAAAGSFPLSTDTTS-AISFDELDRLLAAKNFRQADEETRRLLIALAGEAAQKRGYVYF 122
             A + +   +T +TS AIS+D L + L++KN+RQADEETRRLLI LAGEAA KRGYV+F
Sbjct: 62  PFALSSTTSSTTPSTSQAISYDVLQQHLSSKNYRQADEETRRLLIVLAGEAAVKRGYVFF 121

Query: 123 SEVQFIAADDLKAIDDLWQKYSDGKFGYSVQKRIFEKMNGDFTQLFKKLGWMKKLDTEIE 182
           SEVQFI   DLKAID+LW+++S+ KFGYSVQ+RI+EK+N DF++ F K+GWMKKLDTE+E
Sbjct: 122 SEVQFIPEADLKAIDELWRQHSNNKFGYSVQRRIWEKVNKDFSRFFLKVGWMKKLDTEVE 181

Query: 183 QYNYRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSKILSHPAFGDAIEGEIEEKREEK 242
           QYNYRAFPTEF+WELT++TPEGHLPLTNALRGTQL++ +L HPAF    E E E   E+ 
Sbjct: 182 QYNYRAFPTEFMWELTDDTPEGHLPLTNALRGTQLLNCLLGHPAFQGNEEEEEEVAEEKG 241

Query: 243 VAEDAIGGLKKGLKSMSDRLFKRDYSF 264
                +G L+ G K +S  +FK DYSF
Sbjct: 242 SVNGGLGVLRDGSKPLSKSVFKPDYSF 268

[Close]
BLAST of Cp4.1LG17g10880 vs. NCBI nr
Match: gi|823242937|ref|XP_012454133.1| (PREDICTED: tetrapyrrole-binding protein, chloroplastic [Gossypium raimondii])

HSP 1 Score: 266.5 bits (680), Expect = 4.8e-68
Identity = 155/262 (59.16%), Postives = 190/262 (72.52%), Query Frame = 1 

Query: 12  HSLRRRLHHPNVSS---------TPLPSTSLYLKPTPTAATTGTATATAIATSSLSAAAA 71
           HSLR   HH + SS          P P +S +LKP P+++T+ + T T  + SS +  + 
Sbjct: 5   HSLRTLPHHHHSSSFKRLSTPPPPPPPPSSFFLKP-PSSSTSTSTTNTLSSLSSTTTFSL 64

Query: 72  GSFPLSTDTTSAISFDELDRLLAAKNFRQADEETRRLLIALAGEAAQKRGYVYFSEVQFI 131
            S   ST T+ AISFD L   L+ +NFRQADEETRRLLI LAGEAAQKRGYV+FSEVQFI
Sbjct: 65  PSSTTSTTTSQAISFDTLQHHLSNQNFRQADEETRRLLILLAGEAAQKRGYVFFSEVQFI 124

Query: 132 AADDLKAIDDLWQKYSDGKFGYSVQKRIFEKMNGDFTQLFKKLGWMKKLDTEIEQYNYRA 191
           + +DLKAID+LW+K+SD KFGYSVQKR ++K+  DFT+LF KLGWMKKLDTEIEQYNYRA
Sbjct: 125 SQNDLKAIDELWKKHSDNKFGYSVQKRQWQKVKKDFTKLFLKLGWMKKLDTEIEQYNYRA 184

Query: 192 FPTEFIWELTEETPEGHLPLTNALRGTQLMSKILSHPAFGDAIEGEIEEKREEKVAEDAI 251
           FP EFIWEL +ETPEGHLPLTNALRGTQL + ILSHPAF    EG+ E   E +  E+  
Sbjct: 185 FPDEFIWELNDETPEGHLPLTNALRGTQLFNSILSHPAF----EGQEE---EAETGENGG 244

Query: 252 GGLKKG-LKSMSDRLFKRDYSF 264
             ++ G  K +S++ FK +YSF
Sbjct: 245 VTVRDGTTKPLSNKFFKPNYSF 258

[Close]
BLAST of Cp4.1LG17g10880 vs. NCBI nr
Match: gi|590655360|ref|XP_007033965.1| (Enzyme binding,tetrapyrrole binding [Theobroma cacao])

HSP 1 Score: 266.5 bits (680), Expect = 4.8e-68
Identity = 146/254 (57.48%), Postives = 188/254 (74.02%), Query Frame = 1 

Query: 16  RRLHHPNVSSTPLPSTSLYLKPTPTAA----TTGTATATAIATSSLSAAAAGSFPLSTDT 75
           R LHHP  SS    STS  + P P++     ++ T   ++  T SLS+  + S   +T T
Sbjct: 7   RYLHHPQYSSLKRLSTSESIPPPPSSLFIRPSSSTNNLSSTTTFSLSSTTS-STSSTTST 66

Query: 76  TSAISFDELDRLLAAKNFRQADEETRRLLIALAGEAAQKRGYVYFSEVQFIAADDLKAID 135
           +  ISFD L   L+ +NFRQADEETRRLLI LAGEAA+KRGYV+FSEVQFI+  DL AID
Sbjct: 67  SQPISFDALQHHLSTQNFRQADEETRRLLIVLAGEAAEKRGYVFFSEVQFISEADLIAID 126

Query: 136 DLWQKYSDGKFGYSVQKRIFEKMNGDFTQLFKKLGWMKKLDTEIEQYNYRAFPTEFIWEL 195
           DLW++YS  +FGYSVQKR+++K++ DFT+ F K+GWMKKLDTE+EQYNYRAFP EF+WEL
Sbjct: 127 DLWKQYSSNRFGYSVQKRLWQKVDKDFTKFFLKVGWMKKLDTEVEQYNYRAFPNEFMWEL 186

Query: 196 TEETPEGHLPLTNALRGTQLMSKILSHPAFGDAIEGEIEEKREEKVA--EDAIGGLKKGL 255
            +ETPEGHLPLTNALRGTQL++ ILSHPAF    EG+ +++ E +V   + A+ GL+ G 
Sbjct: 187 NDETPEGHLPLTNALRGTQLLNSILSHPAF----EGQEDDEEEGEVGGEDGAVKGLRDGA 246

Query: 256 KSMSDRLFKRDYSF 264
           K +S++ FK DYSF
Sbjct: 247 KPLSNKFFKPDYSF 255

The following BLAST results are available for this feature:
BLAST of Cp4.1LG17g10880 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GUN4C_ARATH2.9e-5751.28Tetrapyrrole-binding protein, chloroplastic OS=Arabidopsis thaliana GN=GUN4 PE=1... [more]
YCF53_PYRYE2.3e-2238.10Uncharacterized protein ycf53 OS=Pyropia yezoensis GN=ycf53 PE=3 SV=1[more]
YCF53_PORPU5.2e-2237.74Uncharacterized protein ycf53 OS=Porphyra purpurea GN=ycf53 PE=3 SV=1[more]
YCF53_CYACA6.8e-2235.21Uncharacterized protein ycf53 OS=Cyanidium caldarium GN=ycf53 PE=3 SV=1[more]
YC53L_SYNY31.2e-2137.11Ycf53-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0558 PE... [more]
BLAST of Cp4.1LG17g10880 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCD2_CUCSA3.9e-10179.25Uncharacterized protein OS=Cucumis sativus GN=Csa_6G042370 PE=4 SV=1[more]
A5BEZ5_VITVI1.8e-6956.55Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0102g00310 PE=4 SV=... [more]
A0A0D2VM76_GOSRA3.3e-6859.16Uncharacterized protein OS=Gossypium raimondii GN=B456_011G142800 PE=4 SV=1[more]
A0A061EJ50_THECC3.3e-6857.48Enzyme binding,tetrapyrrole binding OS=Theobroma cacao GN=TCM_020047 PE=4 SV=1[more]
A0A072ULR7_MEDTR7.4e-6856.39Tetrapyrrole-binding protein OS=Medicago truncatula GN=MTR_4g067150 PE=4 SV=1[more]
BLAST of Cp4.1LG17g10880 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G59400.11.6e-5851.28 enzyme binding;tetrapyrrole binding[more]
BLAST of Cp4.1LG17g10880 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659089894|ref|XP_008445737.1|5.1e-10279.92PREDICTED: tetrapyrrole-binding protein, chloroplastic [Cucumis melo][more]
gi|449446253|ref|XP_004140886.1|5.6e-10179.25PREDICTED: tetrapyrrole-binding protein, chloroplastic [Cucumis sativus][more]
gi|225433870|ref|XP_002265252.1|2.5e-6956.55PREDICTED: tetrapyrrole-binding protein, chloroplastic [Vitis vinifera][more]
gi|823242937|ref|XP_012454133.1|4.8e-6859.16PREDICTED: tetrapyrrole-binding protein, chloroplastic [Gossypium raimondii][more]
gi|590655360|ref|XP_007033965.1|4.8e-6857.48Enzyme binding,tetrapyrrole binding [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008629GUN4-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0010207 photosystem II assembly
biological_process GO:0008150 biological_process
biological_process GO:0006364 rRNA processing
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0010019 chloroplast-nucleus signaling pathway
biological_process GO:0030154 cell differentiation
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0019899 enzyme binding
molecular_function GO:0046906 tetrapyrrole binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g10880.1Cp4.1LG17g10880.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008629GUN4-likePFAMPF05419GUN4coord: 73..219
score: 7.6
NoneNo IPR availablePANTHERPTHR34800FAMILY NOT NAMEDcoord: 1..263
score: 3.0E
NoneNo IPR availablePANTHERPTHR34800:SF1TETRAPYRROLE-BINDING PROTEIN, CHLOROPLASTICcoord: 1..263
score: 3.0E
NoneNo IPR availableunknownSSF140869GUN4-likecoord: 73..222
score: 7.19