BLAST of Cp4.1LG17g10180 vs. Swiss-Prot
Match:
PP310_ARATH (Pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Arabidopsis thaliana GN=At4g14190 PE=2 SV=2)
HSP 1 Score: 461.5 bits (1186), Expect = 1.2e-128
Identity = 242/485 (49.90%), Postives = 330/485 (68.04%), Query Frame = 1
Query: 28 PHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHHTLKAL 87
P P++LN S S+ +P P + L SLP S AT H H L +L
Sbjct: 21 PPPWNLNS-SFLTSTSYSIPRP-SSLRRSLPL------SINGDATQPTSLLHHHRFLSSL 80
Query: 88 LSDLQKRDSCPLLLLRHHGDWNRDHFWLVVKFLRNASRSHEILKLFDTWKSIEGSRISES 147
L SCPL LL+ GDW++DHFW V++FLR +SR HEIL +FDTWK++E SRISE+
Sbjct: 81 TRRLSLSGSCPLRLLQEDGDWSKDHFWAVIRFLRQSSRLHEILPVFDTWKNLEPSRISEN 140
Query: 148 NYEKVIVLLSQDGLMEDAVSAFQDM-KSLGLRPSLGTYNTLIHGFAARGKFEIAMLFIDE 207
NYE++I L ++ M +A+ AF+ M L PSL YN++IH +A GKFE AM +++
Sbjct: 141 NYERIIRFLCEEKSMSEAIRAFRSMIDDHELSPSLEIYNSIIHSYADDGKFEEAMFYLNH 200
Query: 208 MKEINMTRETDTYDGLIEAYGKYRMYDEMIECLKQMELDGCFPDHITYNLLIREFSKGGL 267
MKE + T+TYDGLIEAYGK++MYDE++ CLK+ME DGC DH+TYNLLIREFS+GGL
Sbjct: 201 MKENGLLPITETYDGLIEAYGKWKMYDEIVLCLKRMESDGCVRDHVTYNLLIREFSRGGL 260
Query: 268 LKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRT 327
LK+ME +Y+S++S++M L+ STL++MLEAYA+FG+++KME +I+ ++ E L+R
Sbjct: 261 LKRMEQMYQSLMSRKMTLEPSTLLSMLEAYAEFGLIEKMEETCNKIIRFGISLDEGLVRK 320
Query: 328 LALVYIQNHMYSRIETLGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKAK 387
LA VYI+N M+SR++ LG + + +T+L WCL LL HA L SR+G+D VV+EM++A+
Sbjct: 321 LANVYIENLMFSRLDDLGRGISASRTRRTELAWCLRLLCHARLVSRKGLDYVVKEMEEAR 380
Query: 388 EIWNVTVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDLVTIGILLDANNKSFDGTRTL 447
WN T ANI LLAY KM DF + L SE+R +HVK DLVT+GI+ D + FDGT
Sbjct: 381 VPWNTTFANIALLAYSKMGDFTSIELLLSELRIKHVKLDLVTVGIVFDLSEARFDGTGVF 440
Query: 448 EAWRRMNMLSRAVEINTDSLVLAAFGKGRFLKDCEEA-YASLELVGRESKVWTYEELIDL 507
W+++ L + VE+ TD LV AAFGKG+FL+ CEE SL ESK WTY+ L++L
Sbjct: 441 MTWKKIGFLDKPVEMKTDPLVHAAFGKGQFLRSCEEVKNQSLGTRDGESKSWTYQYLMEL 497
Query: 508 VYENQ 510
V +NQ
Sbjct: 501 VVKNQ 497
BLAST of Cp4.1LG17g10180 vs. Swiss-Prot
Match:
PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1)
HSP 1 Score: 107.5 bits (267), Expect = 4.6e-22
Identity = 67/295 (22.71%), Postives = 134/295 (45.42%), Query Frame = 1
Query: 139 IEGSRISESNYEKVIVLLSQDGLMEDAVSAFQDMKSLGLRPSLGTYNTLIHGFAARGKFE 198
+ G S Y +I ++DG++++A+ M G +P + TY TL+ GF GK E
Sbjct: 342 LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
Query: 199 IAMLFIDEMKEINMTRETDTYDGLIEAYGKYRMYDEMIECLKQMELDGCFPDHITYNLLI 258
AM +EM+ T++ I+ YG + EM++ ++ + G PD +T+N L+
Sbjct: 402 SAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Query: 259 REFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTN 318
F + G+ ++ G+++ + + T ++ AY++ G ++ YRR+L++
Sbjct: 462 AVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVT 521
Query: 319 MKEDLIRTLALVYIQNHMYSRIETLGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSV 378
T+ + M+ + E + ++ + +L +C LL ++A M S+
Sbjct: 522 PDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSL 581
Query: 379 VQEMDKAKEIWNVTVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDLVTIGILL 433
+E+ + L+L K FSE++ R PD+ T+ ++
Sbjct: 582 AEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV 636
BLAST of Cp4.1LG17g10180 vs. Swiss-Prot
Match:
PPR38_ARATH (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3 SV=1)
HSP 1 Score: 103.2 bits (256), Expect = 8.6e-21
Identity = 85/359 (23.68%), Postives = 156/359 (43.45%), Query Frame = 1
Query: 147 SNYEKVIVLLSQDGLMEDAVSAFQDMKSLGLRPSLGTYNTLIHGFAARGKFEIAMLFIDE 206
+ + +I L +G + +AV M G +P + TYN++++G G +A+ + +
Sbjct: 159 TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 218
Query: 207 MKEINMTRETDTYDGLIEAYGKYRMYDEMIECLKQMELDGCFPDHITYNLLIREFSKGGL 266
M+E N+ + TY +I++ + D I K+ME G +TYN L+R K G
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 267 LKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRT 326
L + ++S+ + T +L+ + K G L + Y+ ++ + T
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 327 LALVYIQNHMYSRIETLGIDLHIK-AGKTDLVWCLLLLSHACLSSR--RGMDSVVQEMDK 386
L Y + S + +DL ++ D+V L+ C+ R GM V + + K
Sbjct: 339 LMDGYCMQNRLSEANNM-LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM-KVFRNISK 398
Query: 387 AKEIWNVTVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDLVTIGILLDANNKSFDGTR 446
+ N +IL+ + + K LF E+ + V PD++T GILLD + +
Sbjct: 399 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 458
Query: 447 TLEAWRRMNMLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELI 503
LE + + + I + ++ KG ++D + SL G + V TY +I
Sbjct: 459 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
BLAST of Cp4.1LG17g10180 vs. Swiss-Prot
Match:
PP247_ARATH (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2 SV=1)
HSP 1 Score: 99.4 bits (246), Expect = 1.2e-19
Identity = 86/379 (22.69%), Postives = 164/379 (43.27%), Query Frame = 1
Query: 134 DTWKSIEGSRISES--NYEKVIVLLSQDGLMEDAVSAFQDMKSLGLRPSLGTYNTLIHGF 193
D ++ +E I S Y VI L +DG +DA+S F +M+ G++ + TY++LI G
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 194 AARGKFEIAMLFIDEMKEINMTRETDTYDGLIEAYGKYRMYDEMIECLKQMELDGCFPDH 253
GK++ + EM N+ + T+ LI+ + K E E +M G PD
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 254 ITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRR 313
ITYN LI F K L + ++ ++SK + T ++ +Y K +D +R
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 314 ILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSR 373
I + TL L + Q+ + + L ++ + +V +LL C +
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 374 RGMD-SVVQEMDKAKEIWNVTVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDLVTIGI 433
+ ++M K++ + + NI++ +LF + + VKPD+VT +
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 434 LLDANNKSFDGTRTLEAWRRMNMLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVG 493
++ K + +R+M + T ++++ A G L E +++ G
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 590
Query: 494 RESKVWTYEELIDLVYENQ 510
+ T + +ID++ + +
Sbjct: 591 FSADSSTIKMVIDMLSDRR 609
BLAST of Cp4.1LG17g10180 vs. Swiss-Prot
Match:
PPR96_ARATH (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2 SV=2)
HSP 1 Score: 96.3 bits (238), Expect = 1.1e-18
Identity = 77/344 (22.38%), Postives = 157/344 (45.64%), Query Frame = 1
Query: 164 DAVSAFQDMKSLGLRPSLGTYNTLIHGFAARGKFEIAMLFIDEMKEINMTRETDTYDGLI 223
+AV+ M + G +P L TY T+++G RG ++A+ + +M++ + + Y +I
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 224 EAYGKYRMYDEMIECLKQMELDGCFPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMD 283
+A Y+ ++ + +M+ G P+ +TYN LIR G L ++ ++++
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 284 LQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETL 343
T A+++A+ K G L + E Y ++ K ++ D+ +L+ M+ R++
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTYSSLIN-GFCMHDRLDEA 382
Query: 344 GIDLHIKAGKT---DLVWCLLLLSHACLSSR--RGMDSVVQEMDKAKEIWNVTVANILLL 403
+ K ++V L+ C + R GM+ + +EM + + N N L+
Sbjct: 383 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME-LFREMSQRGLVGNTVTYNTLIQ 442
Query: 404 AYLKMKDFKRLRTLFSEIRARHVKPDLVTIGILLDANNKSFDGTRTLEAWRRMNMLSRAV 463
+ D + +F ++ + V PD++T ILLD K + L + +
Sbjct: 443 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 502
Query: 464 EINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELI 503
+I T ++++ K ++D + + SL L G + V Y +I
Sbjct: 503 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
BLAST of Cp4.1LG17g10180 vs. TrEMBL
Match:
A0A067ECN4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010459mg PE=4 SV=1)
HSP 1 Score: 583.6 bits (1503), Expect = 2.4e-163
Identity = 275/443 (62.08%), Postives = 356/443 (80.36%), Query Frame = 1
Query: 68 TKHATLLVDTFHEHHTLKALLSDLQKRDSCPLLLLRHHGDWNRDHFWLVVKFLRNASRSH 127
TKH TLLV+++HEH L AL+ L K+ SCPL +L+H GDW +DHFW V++FL+N+SRS
Sbjct: 61 TKHTTLLVESYHEHQALNALIQRLNKKVSCPLQILQHDGDWTKDHFWAVIRFLKNSSRSR 120
Query: 128 EILKLFDTWKSIEGSRISESNYEKVIVLLSQDGLMEDAVSAFQDMKSLGLRPSLGTYNTL 187
+I ++FD WK+IE SRI+E N +K+I +L ++GLME+AV AFQ+M+ L+PSL YN++
Sbjct: 121 QIPQVFDMWKNIEKSRINEFNSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSI 180
Query: 188 IHGFAARGKFEIAMLFIDEMKEINMTRETDTYDGLIEAYGKYRMYDEMIECLKQMELDGC 247
IHG++ GKF A+LF++EMKE+N++ ++DTYDGLI+AYGKY+MYDE+ CLK M+LDGC
Sbjct: 181 IHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGC 240
Query: 248 FPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEM 307
PDHITYNLLI+EF+ GLLK+MEG Y+S+L+KRM L+SST+VA+L+AY FG+LDKME
Sbjct: 241 SPDHITYNLLIQEFACAGLLKRMEGTYKSMLTKRMHLRSSTMVAILDAYMNFGMLDKMEK 300
Query: 308 FYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHAC 367
FY+R+LNS+T +KEDL+R LA VYI+N+M+SR++ LG DL + G+T+LVWCL LLSHAC
Sbjct: 301 FYKRLLNSRTPLKEDLVRKLAEVYIKNYMFSRLDDLGDDLASRIGRTELVWCLRLLSHAC 360
Query: 368 LSSRRGMDSVVQEMDKAKEIWNVTVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDLVT 427
L S RG+DSVV+EM+ AK WNVT ANI+LLAYLKMKDFK LR L SE+ RHVKPD+VT
Sbjct: 361 LLSHRGIDSVVREMESAKVRWNVTTANIILLAYLKMKDFKHLRVLLSELPTRHVKPDIVT 420
Query: 428 IGILLDANNKSFDGTRTLEAWRRMNMLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLE 487
IGIL DA FDGT LE W+R+ L + VEINTD LVLA +GKG FL+ CEE Y+SLE
Sbjct: 421 IGILYDARRIGFDGTGALEMWKRIGFLFKTVEINTDPLVLAVYGKGHFLRYCEEVYSSLE 480
Query: 488 LVGRESKVWTYEELIDLVYENQG 511
RE K WTY+ LIDLV ++ G
Sbjct: 481 PYSREKKRWTYQNLIDLVIKHNG 503
BLAST of Cp4.1LG17g10180 vs. TrEMBL
Match:
V4SBF8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004784mg PE=4 SV=1)
HSP 1 Score: 582.4 bits (1500), Expect = 5.4e-163
Identity = 282/469 (60.13%), Postives = 369/469 (78.68%), Query Frame = 1
Query: 42 SRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRDSCPLLL 101
S+I + +P + LS ++ HS TKH TLLV+++HEH L AL+ L K+ SCPL +
Sbjct: 37 SKILIRKPISCCCLS-SAPSLDYHS-TKHTTLLVESYHEHQALNALIQRLNKKVSCPLQI 96
Query: 102 LRHHGDWNRDHFWLVVKFLRNASRSHEILKLFDTWKSIEGSRISESNYEKVIVLLSQDGL 161
L+H GDW +DHFW V++FL+N+SRS +I ++FD WK+IE SRI+E N +K+I +L ++GL
Sbjct: 97 LQHDGDWTKDHFWAVIRFLKNSSRSRQIPQVFDMWKNIEKSRINEFNSQKIIGMLCEEGL 156
Query: 162 MEDAVSAFQDMKSLGLRPSLGTYNTLIHGFAARGKFEIAMLFIDEMKEINMTRETDTYDG 221
ME+AV AFQ+M+ L+PSL YN++IHG++ GKF A+LF++EMKE+N++ ++DTYDG
Sbjct: 157 MEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDG 216
Query: 222 LIEAYGKYRMYDEMIECLKQMELDGCFPDHITYNLLIREFSKGGLLKKMEGLYRSILSKR 281
LI+AYGKY+MYDE+ CLK M+LDGC PDHITYNLLI+EF+ GLLK+MEG Y+S+L+KR
Sbjct: 217 LIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEGTYKSMLTKR 276
Query: 282 MDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIE 341
M L+SST+VA+L+AY FG+LDKME FY+R+LNS+T +KEDL+R LA VYI+N+M+SR++
Sbjct: 277 MHLRSSTMVAILDAYMNFGMLDKMEKFYKRLLNSRTPLKEDLVRKLAEVYIKNYMFSRLD 336
Query: 342 TLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKAKEIWNVTVANILLLAYL 401
LG DL + G+T+LVWCL LLSHACL S RG+DSVV+EM+ AK WNVT ANI+LLAYL
Sbjct: 337 DLGDDLASRIGRTELVWCLRLLSHACLLSHRGIDSVVREMESAKVRWNVTTANIILLAYL 396
Query: 402 KMKDFKRLRTLFSEIRARHVKPDLVTIGILLDANNKSFDGTRTLEAWRRMNMLSRAVEIN 461
KMKDFK LR L SE+ RHVKPD+VTIGIL DA FDGT LE W+R+ L + VEIN
Sbjct: 397 KMKDFKHLRVLLSELPTRHVKPDIVTIGILYDARRIGFDGTGALEMWKRIGFLFKTVEIN 456
Query: 462 TDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELIDLVYENQG 511
TD LVLA +GKG FL+ CEE Y+SLE RE K WTY+ LIDLV ++ G
Sbjct: 457 TDPLVLAVYGKGHFLRYCEEVYSSLEPYSREKKRWTYQNLIDLVIKHNG 503
BLAST of Cp4.1LG17g10180 vs. TrEMBL
Match:
W9S4F4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021763 PE=4 SV=1)
HSP 1 Score: 566.6 bits (1459), Expect = 3.1e-158
Identity = 274/464 (59.05%), Postives = 362/464 (78.02%), Query Frame = 1
Query: 47 PEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRDSCPLLLLRHHG 106
P+ ++ L LS+ + +S T+H TLLV+TFHEH K LL L K DSCP+ LLR G
Sbjct: 40 PKLFSSLRLSVGSSLSGQNSSTEHTTLLVETFHEHRKFKTLLKRLSKNDSCPMRLLREDG 99
Query: 107 DWNRDHFWLVVKFLRNASRSHEILKLFDTWKSIEGSRISESNYEKVIVLLSQDGLMEDAV 166
DW ++HFW VV+FLR+ SR+ EI+++FD WK+IE SRI+E NY K+I +L ++GLME+AV
Sbjct: 100 DWCKEHFWAVVRFLRHGSRTKEIVQVFDLWKNIEKSRINELNYCKIIKMLGEEGLMEEAV 159
Query: 167 SAFQDMKSLGLRPSLGTYNTLIHGFAARGKFEIAMLFIDEMKEINMTRETDTYDGLIEAY 226
+F++MKS GL P+L YN++IHGF+ +G F+ A+++++EM+E N+ ETDTY+GLIEAY
Sbjct: 160 LSFEEMKSCGLSPTLEVYNSMIHGFSQKGDFDDALVYLNEMREQNVVPETDTYEGLIEAY 219
Query: 227 GKYRMYDEMIECLKQMELDGCFPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQS 286
KY MYDE+ CLK+M+L+GC PDHITYNLL+R+FSKGGLLK+ME +Y +++SKRM LQS
Sbjct: 220 AKYEMYDEIGLCLKKMKLNGCPPDHITYNLLMRKFSKGGLLKRMESVYHTMISKRMYLQS 279
Query: 287 STLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGID 346
STLVAMLE YA+FGILDKME FY R L +KT + EDLIR LA VYI N+++SR+ETLG+D
Sbjct: 280 STLVAMLETYARFGILDKMEKFYMRTLKTKTPLGEDLIRKLAEVYIDNYLFSRLETLGVD 339
Query: 347 LHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKAKEIWNVTVANILLLAYLKMKDF 406
L G+TDL+WCL LLSHA L SR+GMD V+QEM++A WNVT ANI+LL +LKMKDF
Sbjct: 340 LSTTFGETDLLWCLRLLSHAFLFSRKGMDFVIQEMERAHIPWNVTFANIILLTHLKMKDF 399
Query: 407 KRLRTLFSEIRARHVKPDLVTIGILLDANNKSFDGTRTLEAWRRMNMLSRAVEINTDSLV 466
LR S++ V+PD+VT+GIL DA FDGTRTLE W+RM+ +AVE+NTD +V
Sbjct: 400 THLRISLSQL-THSVEPDIVTVGILFDAIGMGFDGTRTLETWKRMDFFYKAVEMNTDPVV 459
Query: 467 LAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELIDLVYENQG 511
+ AFGKG FL++CE AY+SLE RE+K WTY L+DLV++++G
Sbjct: 460 ITAFGKGNFLQNCERAYSSLESEVRETKSWTYNNLVDLVFKHKG 502
BLAST of Cp4.1LG17g10180 vs. TrEMBL
Match:
A0A061ES07_THECC (Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_020186 PE=4 SV=1)
HSP 1 Score: 564.7 bits (1454), Expect = 1.2e-157
Identity = 278/453 (61.37%), Postives = 350/453 (77.26%), Query Frame = 1
Query: 58 PTRAVPTHSPTK-HATLLVDTFHEHHTLKALLSDLQKRDSCPLLLLRHHGDWNRDHFWLV 117
P+ P S K H LLV+T+H H LKALL L+K DSCPL +LR GDW +D FW+V
Sbjct: 49 PSPPRPDGSSCKNHTALLVETYHHHRRLKALLERLEKDDSCPLQMLRDDGDWTKDIFWVV 108
Query: 118 VKFLRNASRSHEILKLFDTWKSIEGSRISESNYEKVIVLLSQDGLMEDAVSAFQDMKSLG 177
++FLR ASRS+EIL++F WK+IE SRI+E NYEK+I LL ++G + AV A ++M G
Sbjct: 109 IRFLRRASRSNEILQVFHMWKNIEKSRINELNYEKIIGLLGEEGRVGQAVQALREMGGYG 168
Query: 178 LRPSLGTYNTLIHGFAARGKFEIAMLFIDEMKEINMTRETDTYDGLIEAYGKYRMYDEMI 237
L+PSL YN++IH +A GKF+ A+ F++EMKEI + ETDTYDGLIEAYGKY+MYDE+
Sbjct: 169 LKPSLEVYNSIIHAYARNGKFDDALSFLNEMKEIGLAPETDTYDGLIEAYGKYKMYDEIG 228
Query: 238 ECLKQMELDGCFPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAY 297
CLK MELD C PDH TYNLLIREFS+GGLL++ME +Y+ +LSK+M+LQSS+LVAMLEAY
Sbjct: 229 TCLKMMELDRCRPDHFTYNLLIREFSRGGLLQRMEQVYQILLSKQMNLQSSSLVAMLEAY 288
Query: 298 AKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDL 357
A FGILDKME YR+++NS T +KED IR LA VYI+N+M+SR++ LGIDL + G+ DL
Sbjct: 289 ANFGILDKMEKVYRKVVNSMT-LKEDTIRILASVYIKNYMFSRLDDLGIDLSSRTGRNDL 348
Query: 358 VWCLLLLSHACLSSRRGMDSVVQEMDKAKEIWNVTVANILLLAYLKMKDFKRLRTLFSEI 417
VWCL LLSHACL SR+GMDSV+ EM +AK WNVT++NI+LLAY+KMKDFKRLR L S++
Sbjct: 349 VWCLRLLSHACLLSRKGMDSVILEMCEAKASWNVTISNIILLAYMKMKDFKRLRILLSQL 408
Query: 418 RARHVKPDLVTIGILLDANNKSFDGTRTLEAWRRMNMLSRAVEINTDSLVLAAFGKGRFL 477
+ V+PD++TIGIL DA FDG LE WR+M +L R VE+NTD LVL AFGKG FL
Sbjct: 409 PSHQVRPDIITIGILSDAIEIGFDGAEALETWRKMGLLYRTVEMNTDPLVLIAFGKGHFL 468
Query: 478 KDCEEAYASLELVGRESKVWTYEELIDLVYENQ 510
+DCEE Y SLE R+ K WTY LIDLV +++
Sbjct: 469 RDCEEIYTSLEPKARKEKRWTYHHLIDLVIKHK 500
BLAST of Cp4.1LG17g10180 vs. TrEMBL
Match:
A0A0D2NX12_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G225200 PE=4 SV=1)
HSP 1 Score: 560.1 bits (1442), Expect = 2.9e-156
Identity = 278/471 (59.02%), Postives = 356/471 (75.58%), Query Frame = 1
Query: 39 CLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRDSCP 98
CLSS P S P R S H TLLV+T+H H L+AL+ L+K SCP
Sbjct: 44 CLSSLSSSP--------STPRRPPDGCSSKTHTTLLVETYHHHRRLRALIEKLEKEGSCP 103
Query: 99 LLLLRHHGDWNRDHFWLVVKFLRNASRSHEILKLFDTWKSIEGSRISESNYEKVIVLLSQ 158
+ +L GDW ++ FW VKFLR+A RS+EIL++F WK+IE SRI+E NYEK+I L +
Sbjct: 104 MQILGDDGDWTKNDFWAAVKFLRHAFRSNEILQVFRMWKNIEKSRINELNYEKIIGLFCE 163
Query: 159 DGLMEDAVSAFQDMKSLGLRPSLGTYNTLIHGFAARGKFEIAMLFIDEMKEINMTRETDT 218
+ ++E+AV A Q+M+ GLRPSL YN++IH +A GKF A F++EMKEI + ETDT
Sbjct: 164 ERMVEEAVEALQEMEGYGLRPSLEIYNSIIHAYAKNGKFNDASFFLNEMKEIGLEPETDT 223
Query: 219 YDGLIEAYGKYRMYDEMIECLKQMELDGCFPDHITYNLLIREFSKGGLLKKMEGLYRSIL 278
YDGLIEAYGKY+ YD++ CLK MELDGC PDH TYNLLIREFS+GGLL+KME +YR ++
Sbjct: 224 YDGLIEAYGKYKRYDDIGACLKTMELDGCSPDHFTYNLLIREFSRGGLLQKMEQVYRVMI 283
Query: 279 SKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYS 338
SK+M+LQ S+LVAMLE+YA FGILDKME YR+++NS +++KED +R LA VYI+N+M+S
Sbjct: 284 SKKMNLQPSSLVAMLESYANFGILDKMEKVYRKVVNS-SSLKEDTVRKLANVYIKNYMFS 343
Query: 339 RIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKAKEIWNVTVANILLL 398
R++ LGIDL + G+ DLVWCL LLSHACL SR+G+DSV+QEMD+AK +WNVT+ NI+LL
Sbjct: 344 RLDDLGIDLSSRTGRNDLVWCLRLLSHACLLSRKGIDSVIQEMDEAKALWNVTIVNIILL 403
Query: 399 AYLKMKDFKRLRTLFSEIRARHVKPDLVTIGILLDANNKSFDGTRTLEAWRRMNMLSRAV 458
AYLKMKDF LR+L S++ +R V+PDL T+GIL DA FDG +TLE WR+M +L RAV
Sbjct: 404 AYLKMKDFTHLRSLLSQLPSRQVRPDLTTVGILFDAIEIGFDGAKTLETWRKM-VLYRAV 463
Query: 459 EINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELIDLVYENQ 510
E+NTD LVL AFGKG FL+DCEEAY SLE R+ K TY +LIDLV +++
Sbjct: 464 ELNTDPLVLTAFGKGHFLRDCEEAYTSLEPKARDKKTRTYHQLIDLVIKHK 504
BLAST of Cp4.1LG17g10180 vs. TAIR10
Match:
AT4G14190.1 (AT4G14190.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 461.5 bits (1186), Expect = 7.0e-130
Identity = 242/485 (49.90%), Postives = 330/485 (68.04%), Query Frame = 1
Query: 28 PHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHHTLKAL 87
P P++LN S S+ +P P + L SLP S AT H H L +L
Sbjct: 21 PPPWNLNS-SFLTSTSYSIPRP-SSLRRSLPL------SINGDATQPTSLLHHHRFLSSL 80
Query: 88 LSDLQKRDSCPLLLLRHHGDWNRDHFWLVVKFLRNASRSHEILKLFDTWKSIEGSRISES 147
L SCPL LL+ GDW++DHFW V++FLR +SR HEIL +FDTWK++E SRISE+
Sbjct: 81 TRRLSLSGSCPLRLLQEDGDWSKDHFWAVIRFLRQSSRLHEILPVFDTWKNLEPSRISEN 140
Query: 148 NYEKVIVLLSQDGLMEDAVSAFQDM-KSLGLRPSLGTYNTLIHGFAARGKFEIAMLFIDE 207
NYE++I L ++ M +A+ AF+ M L PSL YN++IH +A GKFE AM +++
Sbjct: 141 NYERIIRFLCEEKSMSEAIRAFRSMIDDHELSPSLEIYNSIIHSYADDGKFEEAMFYLNH 200
Query: 208 MKEINMTRETDTYDGLIEAYGKYRMYDEMIECLKQMELDGCFPDHITYNLLIREFSKGGL 267
MKE + T+TYDGLIEAYGK++MYDE++ CLK+ME DGC DH+TYNLLIREFS+GGL
Sbjct: 201 MKENGLLPITETYDGLIEAYGKWKMYDEIVLCLKRMESDGCVRDHVTYNLLIREFSRGGL 260
Query: 268 LKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRT 327
LK+ME +Y+S++S++M L+ STL++MLEAYA+FG+++KME +I+ ++ E L+R
Sbjct: 261 LKRMEQMYQSLMSRKMTLEPSTLLSMLEAYAEFGLIEKMEETCNKIIRFGISLDEGLVRK 320
Query: 328 LALVYIQNHMYSRIETLGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKAK 387
LA VYI+N M+SR++ LG + + +T+L WCL LL HA L SR+G+D VV+EM++A+
Sbjct: 321 LANVYIENLMFSRLDDLGRGISASRTRRTELAWCLRLLCHARLVSRKGLDYVVKEMEEAR 380
Query: 388 EIWNVTVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDLVTIGILLDANNKSFDGTRTL 447
WN T ANI LLAY KM DF + L SE+R +HVK DLVT+GI+ D + FDGT
Sbjct: 381 VPWNTTFANIALLAYSKMGDFTSIELLLSELRIKHVKLDLVTVGIVFDLSEARFDGTGVF 440
Query: 448 EAWRRMNMLSRAVEINTDSLVLAAFGKGRFLKDCEEA-YASLELVGRESKVWTYEELIDL 507
W+++ L + VE+ TD LV AAFGKG+FL+ CEE SL ESK WTY+ L++L
Sbjct: 441 MTWKKIGFLDKPVEMKTDPLVHAAFGKGQFLRSCEEVKNQSLGTRDGESKSWTYQYLMEL 497
Query: 508 VYENQ 510
V +NQ
Sbjct: 501 VVKNQ 497
BLAST of Cp4.1LG17g10180 vs. TAIR10
Match:
AT5G02860.1 (AT5G02860.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 107.5 bits (267), Expect = 2.6e-23
Identity = 67/295 (22.71%), Postives = 134/295 (45.42%), Query Frame = 1
Query: 139 IEGSRISESNYEKVIVLLSQDGLMEDAVSAFQDMKSLGLRPSLGTYNTLIHGFAARGKFE 198
+ G S Y +I ++DG++++A+ M G +P + TY TL+ GF GK E
Sbjct: 342 LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
Query: 199 IAMLFIDEMKEINMTRETDTYDGLIEAYGKYRMYDEMIECLKQMELDGCFPDHITYNLLI 258
AM +EM+ T++ I+ YG + EM++ ++ + G PD +T+N L+
Sbjct: 402 SAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Query: 259 REFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTN 318
F + G+ ++ G+++ + + T ++ AY++ G ++ YRR+L++
Sbjct: 462 AVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVT 521
Query: 319 MKEDLIRTLALVYIQNHMYSRIETLGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSV 378
T+ + M+ + E + ++ + +L +C LL ++A M S+
Sbjct: 522 PDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSL 581
Query: 379 VQEMDKAKEIWNVTVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDLVTIGILL 433
+E+ + L+L K FSE++ R PD+ T+ ++
Sbjct: 582 AEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV 636
BLAST of Cp4.1LG17g10180 vs. TAIR10
Match:
AT1G12700.1 (AT1G12700.1 ATP binding;nucleic acid binding;helicases)
HSP 1 Score: 103.2 bits (256), Expect = 4.9e-22
Identity = 85/359 (23.68%), Postives = 156/359 (43.45%), Query Frame = 1
Query: 147 SNYEKVIVLLSQDGLMEDAVSAFQDMKSLGLRPSLGTYNTLIHGFAARGKFEIAMLFIDE 206
+ + +I L +G + +AV M G +P + TYN++++G G +A+ + +
Sbjct: 159 TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 218
Query: 207 MKEINMTRETDTYDGLIEAYGKYRMYDEMIECLKQMELDGCFPDHITYNLLIREFSKGGL 266
M+E N+ + TY +I++ + D I K+ME G +TYN L+R K G
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 267 LKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRT 326
L + ++S+ + T +L+ + K G L + Y+ ++ + T
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 327 LALVYIQNHMYSRIETLGIDLHIK-AGKTDLVWCLLLLSHACLSSR--RGMDSVVQEMDK 386
L Y + S + +DL ++ D+V L+ C+ R GM V + + K
Sbjct: 339 LMDGYCMQNRLSEANNM-LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM-KVFRNISK 398
Query: 387 AKEIWNVTVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDLVTIGILLDANNKSFDGTR 446
+ N +IL+ + + K LF E+ + V PD++T GILLD + +
Sbjct: 399 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 458
Query: 447 TLEAWRRMNMLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELI 503
LE + + + I + ++ KG ++D + SL G + V TY +I
Sbjct: 459 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
BLAST of Cp4.1LG17g10180 vs. TAIR10
Match:
AT3G22470.1 (AT3G22470.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 99.4 bits (246), Expect = 7.0e-21
Identity = 86/379 (22.69%), Postives = 164/379 (43.27%), Query Frame = 1
Query: 134 DTWKSIEGSRISES--NYEKVIVLLSQDGLMEDAVSAFQDMKSLGLRPSLGTYNTLIHGF 193
D ++ +E I S Y VI L +DG +DA+S F +M+ G++ + TY++LI G
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 194 AARGKFEIAMLFIDEMKEINMTRETDTYDGLIEAYGKYRMYDEMIECLKQMELDGCFPDH 253
GK++ + EM N+ + T+ LI+ + K E E +M G PD
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 254 ITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRR 313
ITYN LI F K L + ++ ++SK + T ++ +Y K +D +R
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 314 ILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSR 373
I + TL L + Q+ + + L ++ + +V +LL C +
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 374 RGMD-SVVQEMDKAKEIWNVTVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDLVTIGI 433
+ ++M K++ + + NI++ +LF + + VKPD+VT +
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 434 LLDANNKSFDGTRTLEAWRRMNMLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVG 493
++ K + +R+M + T ++++ A G L E +++ G
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 590
Query: 494 RESKVWTYEELIDLVYENQ 510
+ T + +ID++ + +
Sbjct: 591 FSADSSTIKMVIDMLSDRR 609
BLAST of Cp4.1LG17g10180 vs. TAIR10
Match:
AT1G62930.1 (AT1G62930.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 96.3 bits (238), Expect = 5.9e-20
Identity = 77/344 (22.38%), Postives = 157/344 (45.64%), Query Frame = 1
Query: 164 DAVSAFQDMKSLGLRPSLGTYNTLIHGFAARGKFEIAMLFIDEMKEINMTRETDTYDGLI 223
+AV+ M + G +P L TY T+++G RG ++A+ + +M++ + + Y +I
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 224 EAYGKYRMYDEMIECLKQMELDGCFPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMD 283
+A Y+ ++ + +M+ G P+ +TYN LIR G L ++ ++++
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 284 LQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETL 343
T A+++A+ K G L + E Y ++ K ++ D+ +L+ M+ R++
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTYSSLIN-GFCMHDRLDEA 382
Query: 344 GIDLHIKAGKT---DLVWCLLLLSHACLSSR--RGMDSVVQEMDKAKEIWNVTVANILLL 403
+ K ++V L+ C + R GM+ + +EM + + N N L+
Sbjct: 383 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME-LFREMSQRGLVGNTVTYNTLIQ 442
Query: 404 AYLKMKDFKRLRTLFSEIRARHVKPDLVTIGILLDANNKSFDGTRTLEAWRRMNMLSRAV 463
+ D + +F ++ + V PD++T ILLD K + L + +
Sbjct: 443 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 502
Query: 464 EINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELI 503
+I T ++++ K ++D + + SL L G + V Y +I
Sbjct: 503 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
BLAST of Cp4.1LG17g10180 vs. NCBI nr
Match:
gi|985470191|ref|XP_015380926.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g14190, chloroplastic isoform X1 [Citrus sinensis])
HSP 1 Score: 590.5 bits (1521), Expect = 2.8e-165
Identity = 278/443 (62.75%), Postives = 358/443 (80.81%), Query Frame = 1
Query: 68 TKHATLLVDTFHEHHTLKALLSDLQKRDSCPLLLLRHHGDWNRDHFWLVVKFLRNASRSH 127
TKH TLLV+++HEH L AL+ L K+ SCPL +L+H GDW +DHFW V++FL+N+SRS
Sbjct: 61 TKHTTLLVESYHEHQALNALIQRLNKKVSCPLQILQHDGDWTKDHFWAVIRFLKNSSRSR 120
Query: 128 EILKLFDTWKSIEGSRISESNYEKVIVLLSQDGLMEDAVSAFQDMKSLGLRPSLGTYNTL 187
+I ++FD WK+IE SRI+E NY+K+I +L ++GLME+AV AFQ+M+ L+PSL YN++
Sbjct: 121 QIPQVFDMWKNIEKSRINEFNYQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSI 180
Query: 188 IHGFAARGKFEIAMLFIDEMKEINMTRETDTYDGLIEAYGKYRMYDEMIECLKQMELDGC 247
IHG++ GKF A+LF++EMKE+N++ ++DTYDGLI+AYGKY+MYDE+ CLK M+LDGC
Sbjct: 181 IHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGC 240
Query: 248 FPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEM 307
PDHITYNLLI+EF+ GLLK+MEG Y+S+L+KRM L+SST+VA+L+AY FG+LDKME
Sbjct: 241 SPDHITYNLLIQEFACAGLLKRMEGTYKSMLTKRMHLRSSTMVAILDAYMNFGMLDKMEK 300
Query: 308 FYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHAC 367
FY+R+LNS+T +KEDL+R LA VYI+N+M+SR++ LG DL + G+T+LVWCL LLSHAC
Sbjct: 301 FYKRLLNSRTPLKEDLVRKLAEVYIKNYMFSRLDDLGDDLASRIGRTELVWCLRLLSHAC 360
Query: 368 LSSRRGMDSVVQEMDKAKEIWNVTVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDLVT 427
L S RG+DSVV+EM+ AK WNVT ANI+LLAYLKMKDFK LR L SE+ RHVKPD+VT
Sbjct: 361 LLSHRGIDSVVREMESAKVRWNVTTANIILLAYLKMKDFKHLRVLLSELPTRHVKPDIVT 420
Query: 428 IGILLDANNKSFDGTRTLEAWRRMNMLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLE 487
IGIL DA FDGT LE WRR+ LS+ VEINTD LVLA +GKG FL+ CEE Y+SLE
Sbjct: 421 IGILYDARRIGFDGTGALEMWRRIGFLSKTVEINTDPLVLAVYGKGHFLRYCEEVYSSLE 480
Query: 488 LVGRESKVWTYEELIDLVYENQG 511
RE K WTY+ LIDLV ++ G
Sbjct: 481 PYSREKKRWTYQNLIDLVIKHNG 503
BLAST of Cp4.1LG17g10180 vs. NCBI nr
Match:
gi|641833822|gb|KDO52828.1| (hypothetical protein CISIN_1g010459mg [Citrus sinensis])
HSP 1 Score: 583.6 bits (1503), Expect = 3.5e-163
Identity = 275/443 (62.08%), Postives = 356/443 (80.36%), Query Frame = 1
Query: 68 TKHATLLVDTFHEHHTLKALLSDLQKRDSCPLLLLRHHGDWNRDHFWLVVKFLRNASRSH 127
TKH TLLV+++HEH L AL+ L K+ SCPL +L+H GDW +DHFW V++FL+N+SRS
Sbjct: 61 TKHTTLLVESYHEHQALNALIQRLNKKVSCPLQILQHDGDWTKDHFWAVIRFLKNSSRSR 120
Query: 128 EILKLFDTWKSIEGSRISESNYEKVIVLLSQDGLMEDAVSAFQDMKSLGLRPSLGTYNTL 187
+I ++FD WK+IE SRI+E N +K+I +L ++GLME+AV AFQ+M+ L+PSL YN++
Sbjct: 121 QIPQVFDMWKNIEKSRINEFNSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSI 180
Query: 188 IHGFAARGKFEIAMLFIDEMKEINMTRETDTYDGLIEAYGKYRMYDEMIECLKQMELDGC 247
IHG++ GKF A+LF++EMKE+N++ ++DTYDGLI+AYGKY+MYDE+ CLK M+LDGC
Sbjct: 181 IHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGC 240
Query: 248 FPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEM 307
PDHITYNLLI+EF+ GLLK+MEG Y+S+L+KRM L+SST+VA+L+AY FG+LDKME
Sbjct: 241 SPDHITYNLLIQEFACAGLLKRMEGTYKSMLTKRMHLRSSTMVAILDAYMNFGMLDKMEK 300
Query: 308 FYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHAC 367
FY+R+LNS+T +KEDL+R LA VYI+N+M+SR++ LG DL + G+T+LVWCL LLSHAC
Sbjct: 301 FYKRLLNSRTPLKEDLVRKLAEVYIKNYMFSRLDDLGDDLASRIGRTELVWCLRLLSHAC 360
Query: 368 LSSRRGMDSVVQEMDKAKEIWNVTVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDLVT 427
L S RG+DSVV+EM+ AK WNVT ANI+LLAYLKMKDFK LR L SE+ RHVKPD+VT
Sbjct: 361 LLSHRGIDSVVREMESAKVRWNVTTANIILLAYLKMKDFKHLRVLLSELPTRHVKPDIVT 420
Query: 428 IGILLDANNKSFDGTRTLEAWRRMNMLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLE 487
IGIL DA FDGT LE W+R+ L + VEINTD LVLA +GKG FL+ CEE Y+SLE
Sbjct: 421 IGILYDARRIGFDGTGALEMWKRIGFLFKTVEINTDPLVLAVYGKGHFLRYCEEVYSSLE 480
Query: 488 LVGRESKVWTYEELIDLVYENQG 511
RE K WTY+ LIDLV ++ G
Sbjct: 481 PYSREKKRWTYQNLIDLVIKHNG 503
BLAST of Cp4.1LG17g10180 vs. NCBI nr
Match:
gi|567856726|ref|XP_006421046.1| (hypothetical protein CICLE_v10004784mg [Citrus clementina])
HSP 1 Score: 582.4 bits (1500), Expect = 7.8e-163
Identity = 282/469 (60.13%), Postives = 369/469 (78.68%), Query Frame = 1
Query: 42 SRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRDSCPLLL 101
S+I + +P + LS ++ HS TKH TLLV+++HEH L AL+ L K+ SCPL +
Sbjct: 37 SKILIRKPISCCCLS-SAPSLDYHS-TKHTTLLVESYHEHQALNALIQRLNKKVSCPLQI 96
Query: 102 LRHHGDWNRDHFWLVVKFLRNASRSHEILKLFDTWKSIEGSRISESNYEKVIVLLSQDGL 161
L+H GDW +DHFW V++FL+N+SRS +I ++FD WK+IE SRI+E N +K+I +L ++GL
Sbjct: 97 LQHDGDWTKDHFWAVIRFLKNSSRSRQIPQVFDMWKNIEKSRINEFNSQKIIGMLCEEGL 156
Query: 162 MEDAVSAFQDMKSLGLRPSLGTYNTLIHGFAARGKFEIAMLFIDEMKEINMTRETDTYDG 221
ME+AV AFQ+M+ L+PSL YN++IHG++ GKF A+LF++EMKE+N++ ++DTYDG
Sbjct: 157 MEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDG 216
Query: 222 LIEAYGKYRMYDEMIECLKQMELDGCFPDHITYNLLIREFSKGGLLKKMEGLYRSILSKR 281
LI+AYGKY+MYDE+ CLK M+LDGC PDHITYNLLI+EF+ GLLK+MEG Y+S+L+KR
Sbjct: 217 LIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEGTYKSMLTKR 276
Query: 282 MDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIE 341
M L+SST+VA+L+AY FG+LDKME FY+R+LNS+T +KEDL+R LA VYI+N+M+SR++
Sbjct: 277 MHLRSSTMVAILDAYMNFGMLDKMEKFYKRLLNSRTPLKEDLVRKLAEVYIKNYMFSRLD 336
Query: 342 TLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKAKEIWNVTVANILLLAYL 401
LG DL + G+T+LVWCL LLSHACL S RG+DSVV+EM+ AK WNVT ANI+LLAYL
Sbjct: 337 DLGDDLASRIGRTELVWCLRLLSHACLLSHRGIDSVVREMESAKVRWNVTTANIILLAYL 396
Query: 402 KMKDFKRLRTLFSEIRARHVKPDLVTIGILLDANNKSFDGTRTLEAWRRMNMLSRAVEIN 461
KMKDFK LR L SE+ RHVKPD+VTIGIL DA FDGT LE W+R+ L + VEIN
Sbjct: 397 KMKDFKHLRVLLSELPTRHVKPDIVTIGILYDARRIGFDGTGALEMWKRIGFLFKTVEIN 456
Query: 462 TDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELIDLVYENQG 511
TD LVLA +GKG FL+ CEE Y+SLE RE K WTY+ LIDLV ++ G
Sbjct: 457 TDPLVLAVYGKGHFLRYCEEVYSSLEPYSREKKRWTYQNLIDLVIKHNG 503
BLAST of Cp4.1LG17g10180 vs. NCBI nr
Match:
gi|694396645|ref|XP_009373597.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Pyrus x bretschneideri])
HSP 1 Score: 571.2 bits (1471), Expect = 1.8e-159
Identity = 282/469 (60.13%), Postives = 354/469 (75.48%), Query Frame = 1
Query: 45 PLPEPYTKLLLSL--------PTRAVPTHSPTKHATLLVDTFHEHHTLKALLSDLQKRDS 104
P P+P T SL P A P TKH LLV+TFHEH LK +L + D
Sbjct: 37 PSPKPRTPFPSSLCYSHPFPQPNVAAPRGGSTKHTILLVETFHEHQRLKDVLVKVTTEDC 96
Query: 105 CPLLLLRHHGDWNRDHFWLVVKFLRNASRSHEILKLFDTWKSIEGSRISESNYEKVIVLL 164
CPL LL GDW +D FW V+ FL N SRS EIL+LF+ WK IE SRI+E NY K+I LL
Sbjct: 97 CPLQLLADDGDWTKDQFWAVITFLNNVSRSKEILQLFEMWKKIEKSRINEFNYSKIIGLL 156
Query: 165 SQDGLMEDAVSAFQDMKSLGLRPSLGTYNTLIHGFAARGKFEIAMLFIDEMKEINMTRET 224
S++GLME+A FQ+MKS LRPSL YN++IHGFA +G F+ A+ ++ EM+E+N+ ET
Sbjct: 157 SEEGLMEEAAPCFQEMKSHDLRPSLEVYNSMIHGFARQGNFDDALFYLSEMREMNVAPET 216
Query: 225 DTYDGLIEAYGKYRMYDEMIECLKQMELDGCFPDHITYNLLIREFSKGGLLKKMEGLYRS 284
DTYDGLIEAYGKY+MYDEM C+K+M+L+GC PDHITYNLLIREFS+GGLLK+ME +Y+S
Sbjct: 217 DTYDGLIEAYGKYKMYDEMGMCVKKMKLNGCPPDHITYNLLIREFSRGGLLKRMESVYQS 276
Query: 285 ILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHM 344
+LSKR+ LQSSTL+AMLE YAKFGILDKME Y R+LNS+T +K+DLIR LA VYI+N+
Sbjct: 277 MLSKRIILQSSTLIAMLEVYAKFGILDKMEKVYMRLLNSRTLVKDDLIRKLAEVYIKNYK 336
Query: 345 YSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKAKEIWNVTVANIL 404
+SR+E LG+D+ + G+TDLVWCL LLSHA L SRRGMDS+VQEM + WN TVAN +
Sbjct: 337 FSRLENLGVDISSRFGQTDLVWCLRLLSHAGLLSRRGMDSIVQEMKEENAPWNATVANTI 396
Query: 405 LLAYLKMKDFKRLRTLFSEIRARHVKPDLVTIGILLDANNKSFDGTRTLEAWRRMNMLSR 464
+LAYLKMKDF LR L S++ + VKPD++T+GIL DAN +DG+ TL+AW++ +L R
Sbjct: 397 MLAYLKMKDFTHLRILLSQLLTQGVKPDIITVGILFDANMIGYDGSGTLDAWKKKGLLQR 456
Query: 465 AVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELIDLV 506
+VE+NTD LVL FGKG+FL++CE A++SLE RE+K WTY LIDLV
Sbjct: 457 SVEMNTDPLVLTTFGKGQFLRNCEAAFSSLEPEVRENKTWTYHHLIDLV 505
BLAST of Cp4.1LG17g10180 vs. NCBI nr
Match:
gi|658004698|ref|XP_008337481.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Malus domestica])
HSP 1 Score: 569.3 bits (1466), Expect = 6.8e-159
Identity = 284/482 (58.92%), Postives = 357/482 (74.07%), Query Frame = 1
Query: 27 SPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHHTLKA 86
SP P S C S P P+ A P TKH TLLV+TFHEH LK
Sbjct: 38 SPKPRTPFPSSLCYSDPFPPPDV-----------AAPRGGSTKHTTLLVETFHEHQRLKD 97
Query: 87 LLSDLQKRDSCPLLLLRHHGDWNRDHFWLVVKFLRNASRSHEILKLFDTWKSIEGSRISE 146
LL + D PL LL GDW +D FW V+ FL NASRS EIL+LF+ WK IE SRI+E
Sbjct: 98 LLVKVTTEDCLPLQLLADDGDWTKDQFWAVITFLNNASRSKEILQLFEMWKKIEKSRINE 157
Query: 147 SNYEKVIVLLSQDGLMEDAVSAFQDMKSLGLRPSLGTYNTLIHGFAARGKFEIAMLFIDE 206
NY K+I LLS++GLME+A FQ+MKS LRPSL YN++IHGFA +G F+ A+ + +E
Sbjct: 158 FNYSKIIGLLSEEGLMEEAAPCFQEMKSHDLRPSLEVYNSMIHGFARQGNFDDALFYFNE 217
Query: 207 MKEINMTRETDTYDGLIEAYGKYRMYDEMIECLKQMELDGCFPDHITYNLLIREFSKGGL 266
M+E+N+ ETDTYDGLIEAYGKY+MYDEM C+K+M+L+GC PDHITYNLLIREFS+GGL
Sbjct: 218 MREMNVALETDTYDGLIEAYGKYKMYDEMGMCVKKMKLNGCPPDHITYNLLIREFSRGGL 277
Query: 267 LKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRT 326
LK+ME +Y+S+LSKRM LQSSTL+AMLE YAKFGILDKME Y R+LNS+T +K+DLIR
Sbjct: 278 LKRMESVYQSMLSKRMFLQSSTLIAMLEVYAKFGILDKMEKVYMRLLNSRTLVKDDLIRK 337
Query: 327 LALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKAKE 386
LA VYI+N+M+SR+E LG+D+ + G+TDLVWCL LLS A L SRRGMDS+V+EM + K
Sbjct: 338 LAEVYIENYMFSRLENLGVDISSRFGQTDLVWCLRLLSRAGLLSRRGMDSIVEEMKEQKT 397
Query: 387 IWNVTVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDLVTIGILLDANNKSFDGTRTLE 446
WN TVAN ++LAYLKMKDF LR L S++ + V+PD++T+GIL DAN +DG+ TL+
Sbjct: 398 PWNATVANTIMLAYLKMKDFTHLRILLSQLLTQGVEPDIITVGILFDANMIGYDGSGTLD 457
Query: 447 AWRRMNMLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELIDLVY 506
W++ +L R+VE+NTD LVL FGKG FL++CE A++SLE RE+K WTY LIDLV
Sbjct: 458 IWKKKGLLQRSVEMNTDPLVLTTFGKGHFLRNCEAAFSSLEPDFRENKTWTYHHLIDLVL 508
Query: 507 EN 509
++
Sbjct: 518 KH 508
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP310_ARATH | 1.2e-128 | 49.90 | Pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Arabidop... | [more] |
| PP362_ARATH | 4.6e-22 | 22.71 | Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN... | [more] |
| PPR38_ARATH | 8.6e-21 | 23.68 | Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... | [more] |
| PP247_ARATH | 1.2e-19 | 22.69 | Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... | [more] |
| PPR96_ARATH | 1.1e-18 | 22.38 | Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A067ECN4_CITSI | 2.4e-163 | 62.08 | Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010459mg PE=4 SV=1 | [more] |
| V4SBF8_9ROSI | 5.4e-163 | 60.13 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004784mg PE=4 SV=1 | [more] |
| W9S4F4_9ROSA | 3.1e-158 | 59.05 | Uncharacterized protein OS=Morus notabilis GN=L484_021763 PE=4 SV=1 | [more] |
| A0A061ES07_THECC | 1.2e-157 | 61.37 | Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_... | [more] |
| A0A0D2NX12_GOSRA | 2.9e-156 | 59.02 | Uncharacterized protein OS=Gossypium raimondii GN=B456_006G225200 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G14190.1 | 7.0e-130 | 49.90 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT5G02860.1 | 2.6e-23 | 22.71 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G12700.1 | 4.9e-22 | 23.68 | ATP binding;nucleic acid binding;helicases | [more] |
| AT3G22470.1 | 7.0e-21 | 22.69 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G62930.1 | 5.9e-20 | 22.38 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
