Cp4.1LG17g10040 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG17g10040
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	UBX domain-containing family protein
Location	Cp4.1LG17 : 7547362 .. 7556246 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGATTAACCTATAATTTTACACCCGCGAAAAAGAGAAAAAATCTTCGTCGAATGTCCGTTGCTGTGCTCGTGACCGCGCGTCGGGGTTGTCAACAGAGAATCAGCTCATCCTTCTGAAATTTCTTAGTCCAATCTCCACTGAATTTGTTTCAGGTGATCGGAATTTCAGTTTCTTGTAATAGGTCATCAAATTTTGCTTTTGGAATTGACGGCCAGTGGCAAGTGGATAGACGAATGGAGATTGAAGGGGCTGTGTGAAGACGGGTCCTGATTTTATCACGGGGGATATAATTGAATTGTTTATGTTTTGATTCTTCTCATTATTACTTAGTTTTTCTTGAGTGGTTTGGTTTTAAAATCTGACTCTCTTTGTATTTCTTACTGTCTGCGATTTTGCCTCATCGCCATTGTTGTTTATTCTTTCTTTGTGCAGATGGAGCAGTCTATATCATCACTGGCATTCAAGGGATCCGTGCCTGAAGCAATTATCGAATCCAAAAATCAAAAAAAACTATTTGTGGTTTATATTTCCGGTAAATTTTTAGTCGTTCTACCTTACTCAAGGGTTTTTCTGATTTGGACGTCTTTTAGATGGAAGGAGGAAAGTCAACTTTTGTTATCCTTAAGTAGAGGGGGAGTAACTGGTCGAAGTGATGATGTATATCTATACTTTCTCCCTTTTTCCCTGTATGTTTCTACTTAGATATAGCCAACCTAGAGTTTCTACTTGGAAAAGCACATTCAAGAAGATCAGTTTATTTGTTCGTTCCTTTTTTATGGTTATCAGGATAGGTGAATTATTAAGGACCCGTATCAAAATTGATTTCTTACCCAAATCCAAGGATATATGAACGATTAGTTCTAGGTGTGCAAAAATTTAGGAGAATTCTGTTTTTCTTAATCACATTATTGCAAGGAATTCAGTTCTTATACTCAAGTAGGCCTGCAAATTTGTTCATGTTCAGGTGCTCTCTCGGTTGTATTACCATTGGGTTTTAGCCCCCCAAAGATGTTGACACATGGAGTGCCTTACACACATCTTTGTTAATATTCCATTTTTCCTCATTAATCTATATCGGAGGCCTTTTGTTTGACCTCTCTTTTCAGGATTAGGGATCCCTTGTCCATAAGCCTTCACGTTATCTTCCACTCTTGTTTTGTCTAATGAAGTTTCCTTGTTTCTTATTTTAACAAATTCAGTCAACTATGGGAAAAAGTATTTTGTGATGTGGGATTCTTTTCTAGCACCTACAAATTTCCTTATGCTTTTAGCACAGGTGACACTTGCCGTTAATATTGTATATTCCACTAGTTCGTACCCCATTTTCTTTGAGATTAACATGAATATCCATTCCCCCGGGGCTGGCAGATGCAGAGAGAGAGAGAGAGAGAGAGAGGGAAAAAAGTAAGAAAAAAGGAAAAGGAAAAATGAAGGAAAAGAGGAAAAAAGAGAGCCGAAAGTTTTCTCTAAGATATGAGAATTCTGTGTAGTTAAACAACTAATGTGTGATGGATTGGATGTTCTATTTATGTGAGGTCCTGCAGCATAGAAGTAAGGAGAATGGGCCATGCCAGGGTGTTGATTAGGAAATCATTGGGAGAGAGGAAGGTTGTGTTGCACCTAATTGTCATTTTTCTGTTGGGTCCCATGGATGGTAATTGGAAGGGGAGCTTCAACTAGATTCTGTGAGGAAAGGTCTAAGACTCCTGAATTTCCTGGGGTTTCTTTAGCTTGAGATTTTACAACCGCACTTACCTATAGAAGAACATTTTAATCTCTATTTTCTTTTCAGTTTTCTATTCCAAAACCCATCAACAATCTCAAGATATTATAACAACTGACTACTATGAGAATTTTGAATTTTGTGCTGTTGTAATTTATCCTTCTCCTTCCCCTTTTATTTTATTTAGGTGATGATGCTGAATCAAGCAGTTTGGAAAGTTCAACTTGGACAAGTTCAAGGGTAAACTTCTATCTGGAGTCTCAAATACTTGAATTGACGATTAATGTTCCTTCGTTTGATGGTTTACCAGGTGGCTGAAGCAGTGTCAAAATACTGCGTTTTATTGCATATTCCTGCTGGAAGCTCTGATGCTGCTCAGTTTTCATCGATATGTATCCTTATATTGAGTAGCATTTTTCAGTTGTTATCTGTATTGCATGTTACTGGGCATGGCTTGACTTACTGTTATGAAATCATAACCTGAGCAATAAAAATTGGTTTGTACATCCTTTTTTTCTTGTTAAAAAAAAAAAAATAGAATTGGTTAAAATTGATTTCACATTGGCCTTGACGTTGGGTCTCTGTTAACTACAATAATAAAAAGTTGATTTGGAATATTTTTTAGTTAATTTTCTAACATTTTTTTATGCTGACATGGCAATAGTTGACTAGTTTAATAATTTGTCTTTTTTCATAAATTATATAAATCAACAATTAAACCAATAGAGTAATCTTGTATTTTGTTGTGGAGACACCAAGACAGACTGAATCCTTGAATAATTGGTTCCAACGATTTTAGTTGTACTCATAATCAAATGAACAGTTATTGTCTACATTTCCACAACGGCCGTAGATGCTAGGGTGAAGAAAAACATGGGAGTTTCTGTACTACTGCTGTACTTACAGCTCCAAGAGCCAAATTCCAACAAAAAAAAAAACAAAAAAAAAACAGACATTTTTAGGAATTTTGAACCCCAAGTTACTTCATTCAATGTCTTGGGGAGGATGGGTTGCTAGTTCTTTATCTCCACAACGATGTTGAAGAAACATATTGTTGAAAAAATTGCCTCAAATGAACTAGTCATCTTGGGAGATATGATGGAAATCCGTGAAACAAATGTAATATGTAGCTACAACCACTCATCTAATTCTCTATTGTGTATGGATATTCTTAAGTGGAGGCATCGAATTTTCTTCTCTTCCTTCTACCTCTTACGTTAAACTTAAAATCCTTCTCCATGCATTGTTTGCATTTGATTATAAAGTTTTGAGGACATATTCTGCTCATACCTTCATTTTTCTTTATGAACAAACTGCTACTGTCAACAGCATACCTACTGAAACCTTGGGTATCTCCTACTACATTTATTCTCTTCAGATTTTCAAGACTGAGACCACCTTCCATTGTGTAGTTTGGACTTTTATATTTCGTTTTTTTTTTTTGAACTCTTAGATCTTTTCAAAATATATTTAATCATAAGGCGTCTATAAAGCTGGTATAATTGTATTTGATCTGTAGATCAAAGTTATCAGTGCCTACTACTGTCATGTCTAAAAGCAGTAACACTCAAGGAGTGGTGATAACTGTATTATTTATTTATTATTATTATTTTTAGTTAGTGCTTGATGAGAATTTGTACGATTTCTAAATAGGATTGTTATTCTTTTTCCTTGGGCTAGCTTCTCAGCTTGATATATCTTCTTTCCCCCAGTCTCTAAATGACATCATGAACTTGATCTCTAATACTTTTCAAGGTCGAAGTTTTTTCCTTGCATCAGTCTACTGCAGACCCGCAGAAATCTGTACCATGTATAACAGCTGTTGGATACAATGGTATACAACTTTGGCAAAATGGTAAGGATTGTTGATGAGAAGTTTCAATTGCCACAAGCTAAACATATTATATGTTTCTGTTCAAGTTTTGATTTCTGTCTTGAAATATTCTAGAGGGCTTTGTTGGTGCTGAGGTTTTGGCTTCCAGTTTAGAGAAGGCATGGTTGGGTCTTCATATCCAGGTATATTACTGTTTCCTATCAGTAGTTTTTTTAATAATTTTTTTTACCTACTTTGTGTTATAATGTGGAGCTCTACAGATTCTTGGTGTGTGATATACCATGTAAAAGTTGTCAGATTTTGTGTTTTAATGTGTGATGTTGGAAGGATTTGGAGTTGCAAGAGCTGAAAAAAGGAATGCATGTTTGGTGGTTCAATTGAAACTTCAATGTACAGCCAATCTTCTATTCCTTCTTTGTTGAAAGTCGCATTTAGATCATACTTTTCTTTTGATAATCCGGGAGCATTATTGGGATTCAAAATAGAGAAAGAGGCTTCATGGAGAAAAGTCAGAGTTGGTATATCAGAAATTTACAGTTGACGCATAAAAGTAATCCAAGATGGGCTGGAATGGTCCCTGGCTCTTGATTTAAAATACTGGAATTTTTGGGATGACGTGTTTAGTTATGAATTGAAAATTGAATCCAAGTCGGGAGGGTGAGTGGACTGACGGCTTCCTAATCTTTTCCATGTCCAAGTTTTTAGAAAACTTGCTGGTTTGGGGATACAATTATTTGAACCTATCCCTTAGGATGAATCTTTTTGATCGGAAGCTTAATGGGTGGGTTGGGCTCATCAACAATGTGGAAGGGATTGCTCTCTTAATCAGGATTGATGCCTTTGAAACATTGGCTATACTAACTTGCAAAGCTGCCCTGACCTTCTCCAACTCCTATCCACACTCAAGTTCGATAAACATACTACAAATGTGATTTGAAATGGAGAAACCACTTCTTATTAATTTATCTATCTTTAAAAAACTGAGCTTTTATTGGGAAAAATAAAAGAATATTCAAGAGCATACAAAAGAAAAACCTATCAATGAAGGAATCCAAAAAAACGACCTATAGAATGAGACTTCAATCCAACAAAATCAACTAAGTTCATAAATACTAAAATGTCTAGTCATCCACGAAAAGTCCCTCATTAGAAGACAAAGATAAAAGGGTCCTGAAAAAAGTTTGGGTCCTTTAACTTAGACAAGACTTGACACAATTGATAGAAGGCAGAACCAGAGTTGTGCTATTTGTTCTGTGTGAACTGTAAAAATCATGAAGGTGCTTGTAACATCTTTTTATCCCCTGTATTCTTGTACTCGGTTTAGATTTTTGTGGTTAAGCTGGTTTTGTGGGAGAACGCCACGAAAGACATTTTGTAGCTTAGTCGGATGGAAGAAATTAGAAGAATCGTGCACAAAATGCACTTTTCATCCCTGAAATTTGAGTTTGGCATCTATTTGGTCTGTAAGGTTTCAAAAGGGCACTTTAGTTTTTGAGGTTTGGAAAATACTATTAAGTGGTTCCTAACTTTGACAATTAGTTGACTAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGATGTGACAAACTATAAATGAGGTGGCAATTTTTACTAATTTTATACTCTGATCTTTTGGATTACATGGCCTTTTCATGTTTTGCCCTCTTATTCCTTTTCTCTCTCTTCCCTTCTCATTTTTCATAGCTTTTCAAAAATGAAATATTATGAGGTATTATGATGTGATTGAGGTAAGTTAGGCCTCTCATTTTGTTCCTCCTATCTTTTGTGAAATATTTTTCATCTTGAACCATCCTTAGAAGTCTGAGGCACCAGAATATTTTAGTTATATCTGAAGATGAACTGCAGGAAACAACCGCATCTGTTTTGACGGCAGCCCTTGCTTCAAAGAAGTCTGAGGCATCTACTTCGAGGCCTTCTGATTCAGGGAGTTCCTCTTTGGCAGCTGTTTCTCATGCAGATCATCATATTGATTCCTCAGAGACTAATCTGGGTGTCAATAGTTGTGTAGCAGAGGAAGAGAAAGGGACTGAAAATTCCTCTAAAAAAAGGAAGGAGCCTGAAAAACGAGTCAAGGTATGGTATCAACATTGTTTACCCTAGGCTAAATGGTTATATCATTTATAATTGGTTCCATTTTATTTTGTAATTTTTAGGAGGAAGACATCAAATCAGATGTTAAGGAGTCCACTGTACATCATTCTGTGAGTGTTGGGAATAATAATGAATCCCCTGATCCCTCTGAGAATAATAAAGGCTCATTGGCTGATCCTGGAGGCCAGAAAAACTGTTCTTCTGAAAATACTTCCACAATTGTGCACGACTCTCCTATCATTCCAAACCATATTGAGTCATGTCAATCAGGAGCTTCAAGACCAATTCCTCCAGAAACCAAGGAAGTGGCCCAACAAGAAAAGAACAAAATTGTGGATGAGAATAATGCTATTGAAAATGGCAGTGCCCCCAAGAACTACACTTCAAGTGATATTCATTTAAACATTCGGCTGCTGAATGGTGTTAACGTCCAGGAGAAGTTCTCCAAGACAAGCACCTTGAGAATGGTCAAAGACTACGTGGATAACAGCCAGGAAAGTACCTTTGGATCTTATGATTTAGCTGTTCCATATCCACGCAAGGTTTTCACAGATCAAGGTATGATCTGAATATTTATTACTTGGTTAAATTCAATAGATCCTCATATATTATTGATTTTTTTTTCATTTGGTCCCTAATAATATTAAAATTTTAATTTATATTTCCAATAAATTACTTTTGTTTGTCTTTGAAGTTTGAAGTTTGGGTTAGGATTCTATTTAGTGTTAGAACTAAAGCCTAATTAAAATTTTAACCTGAGAGGTTTGTGAAAAGGTAAAATCATTAGTGATATTAAACAAACGTTGCTAGAAGGCTAGAACGTGTTAGAGGATGATATGAAAATATGTTACGTGGTTAATCTAACAAACCATGTGACAAGTTTTGTTTTTTGTTTTTGTTTTTTTTTTTTTATAATTTTATTGATGAATAAAATAAAAGAGTAAAAACTCCCACTGCCTAAAGGTTACATGAAAACTCAACAATTAGACATCAAAGAAGAAAGGTTATAATCAGTAAAAGGGTGCTTACACTTTCAAAAATACATAGCATGAAGAATTACTAGGTCTGAAAATTGATCAAAAGTAGATAAAGAGTTTCTGAAATTTCTTCCATTTCTTTGCTGCAAAGAAATCGGAGGAAAATTCTATGATAGCAAGCCACAAAATCCTCTTCGCTCTCTGGAAAGGGTGTCCCACCAAAATAGTAGCAAGATCATACTTGTTAGGAAAATTCAAAGACCAGTCAAAAGCTTCTAAAGTCACCATCCGATATCTTGAGGCTAAGGAGCAATTAGAAAAAAGTGTCCAAGATGCTCTGAGTTAGAAGCACACCTAATACACCATGGAGGAGAGAAATAGAAATGTAGCATCCTCCTTTGAAAGTTGATCTGCTGTACTTTTTATTTTTAACAAGGAATTACTTCTCATTGATATAATGAAAAAAAGTTAAAAGTTCAAGTGATACAAACTCCCAAAGAAAGTGAAAAATAAGAATTAAAAACAGCAAAGACATCTATGTAAAGAACAACCATGGACAAGAACTTTTCATAAACCTAACAATACAAACCCCTACAAAAGGTGACTCTATTATTGAATTGACCATTCACGTTTCGAGTTTCATGTAAATAATCTTTAAACGGCATAATACTCATAGTCCGGCAATTGTTTTTGTTGCCATTCTAGCACCTCCTTGAAATTAGAACATCCAACCTATATGGCACTTCGAATACATGTTGGTACCCCTGTTTCTTTGAAATGAGATACTAGAGGTATGGTGATCACATCTATGAGTTCTTATCATGAAACCCTTGCTGTGTGCCTTACTAAAATATCAACTGGACTGGCATCCACTGATTAGGACTAAGGATCAGCTGGTATTGATTGAAACTGATATTCAGATCTTTCAAACGATTCATCTATGATTCTATAACTATAGCTAATAGTCCGGCTCAAATTGGTGTTTTTCTGGTCTGTGGACTTCATTAAACTCTTTAACTTCCTTATTTGAAGTTTTGTTGGAATCTGTCATTGTAATACTTAATGACATGAAGATTCTTACTGGGAAGCTCGGAGTTGACCATTTTCTTAATTATTTGAATTGCTGCAGATTTGGAGAAATCATTGTCTTACTTGGGCCTTTCTAATAGACAATCATTGATAATGGTTCGACATCTGGGAGTTACTCGTGATTTCAGGGGAGCATCCTCCTCTGCTGATCAAAGAAATTCTGCAGCCAATGGTGGATCTTCAGATGAAAACGGTGATGGATACTTTGCATTCGTTAGAAGGATTTTATCTTATGTGAATCCATTCTCCTATCTTGGGGGCACCAGACATGAAACTCAAGGAGATGTGCGACAGTATAGTGAGTTCCTTTTCCTAAAATAGAAATTTCACATGAGTGTTAATGTTCTTTTAAGGTTAAAATCTTGGTTTAACCCTTGAACTTTCAGGATTATTTTGTTATGGTCTCTTAACTTTCAAAGGGTCTACTTTAGTTTCAGGGGTTTTGTGGTTGGCTTTGAGTATTTTTATGGTTGGGTTTGGGTGATTTTGTGGCTTAGTTTTTTACTCTTTTAAGTATGTGAAAATTCAGCCATTGTTGTAAGTATAGAGTTAGAAATGAACTTTTTTTCTAATATGTTTATATATATATGTATCAGGTAGTGAATTTTCAGAAGTAGAGAGGCGCCATGTCCGCCAACCAAACCAAGGAACTGCAACAACGAGCGGAAACAATACCCGTGGGAAGCAACCATTGTCAACAGCTAGATTTGGAGCAAATATTCATAGCATTCATACGTTGAAGAAGGATGAAGACGACGAACGGTTCAAAGGTAGGAATTCCTTTTGGAATGGTAATTCTACTGAGTATGGTGGTGATGATGGTGATAGCAAATGAGGCCCAATGTCTAGACAACACTACATGTGATGCTTATATTATATAAACAACCTGCTCTTAAACCGTTTATTAACAACACAGACACTGTAAATACCTAAAATTAAATAATTTTATACATTCGGATGTCATCTCTGCTCTCAAGGTTGTTTTTCAGTTTGACCATACACTCTTTTAAAAGGACGAGGGAAGCATAGTGTTCTTTGTGGTTCTGCATTTTGAATAAAGCTTCGTTTGGATTGAGGTGTGGATTAGTATTGTAACGGCCCAGATCTACCGCTGAAACCTTCTCCTAGCAGACGCGTTTTAAAGCCTT

mRNA sequence

AAGGATTAACCTATAATTTTACACCCGCGAAAAAGAGAAAAAATCTTCGTCGAATGTCCGTTGCTGTGCTCGTGACCGCGCGTCGGGGTTGTCAACAGAGAATCAGCTCATCCTTCTGAAATTTCTTAGTCCAATCTCCACTGAATTTGTTTCAGATGGAGCAGTCTATATCATCACTGGCATTCAAGGGATCCGTGCCTGAAGCAATTATCGAATCCAAAAATCAAAAAAAACTATTTGTGGTTTATATTTCCGGTGATGATGCTGAATCAAGCAGTTTGGAAAGTTCAACTTGGACAAGTTCAAGGGTGGCTGAAGCAGTGTCAAAATACTGCGTTTTATTGCATATTCCTGCTGGAAGCTCTGATGCTGCTCAGTTTTCATCGATATACCCGCAGAAATCTGTACCATGTATAACAGCTGTTGGATACAATGGTATACAACTTTGGCAAAATGAGGGCTTTGTTGGTGCTGAGGTTTTGGCTTCCAGTTTAGAGAAGGCATGGTTGGGTCTTCATATCCAGGAAACAACCGCATCTGTTTTGACGGCAGCCCTTGCTTCAAAGAAGTCTGAGGCATCTACTTCGAGGCCTTCTGATTCAGGGAGTTCCTCTTTGGCAGCTGTTTCTCATGCAGATCATCATATTGATTCCTCAGAGACTAATCTGGGTGTCAATAGTTGTGTAGCAGAGGAAGAGAAAGGGACTGAAAATTCCTCTAAAAAAAGGAAGGAGCCTGAAAAACGAGTCAAGGAGGAAGACATCAAATCAGATGTTAAGGAGTCCACTGTACATCATTCTGTGAGTGTTGGGAATAATAATGAATCCCCTGATCCCTCTGAGAATAATAAAGGCTCATTGGCTGATCCTGGAGGCCAGAAAAACTGTTCTTCTGAAAATACTTCCACAATTGTGCACGACTCTCCTATCATTCCAAACCATATTGAGTCATGTCAATCAGGAGCTTCAAGACCAATTCCTCCAGAAACCAAGGAAGTGGCCCAACAAGAAAAGAACAAAATTGTGGATGAGAATAATGCTATTGAAAATGGCAGTGCCCCCAAGAACTACACTTCAAGTGATATTCATTTAAACATTCGGCTGCTGAATGGTGTTAACGTCCAGGAGAAGTTCTCCAAGACAAGCACCTTGAGAATGGTCAAAGACTACGTGGATAACAGCCAGGAAAGTACCTTTGGATCTTATGATTTAGCTGTTCCATATCCACGCAAGGTTTTCACAGATCAAGATTTGGAGAAATCATTGTCTTACTTGGGCCTTTCTAATAGACAATCATTGATAATGGTTCGACATCTGGGAGTTACTCGTGATTTCAGGGGAGCATCCTCCTCTGCTGATCAAAGAAATTCTGCAGCCAATGGTGGATCTTCAGATGAAAACGGTAGTGAATTTTCAGAAGTAGAGAGGCGCCATGTCCGCCAACCAAACCAAGGAACTGCAACAACGAGCGGAAACAATACCCGTGGGAAGCAACCATTGTCAACAGCTAGATTTGGAGCAAATATTCATAGCATTCATACGTTGAAGAAGGATGAAGACGACGAACGGTTCAAAGGTAGGAATTCCTTTTGGAATGGTAATTCTACTGAGTATGGTGGTGATGATGGTGATAGCAAATGAGGCCCAATGTCTAGACAACACTACATGTGATGCTTATATTATATAAACAACCTGCTCTTAAACCGTTTATTAACAACACAGACACTGTAAATACCTAAAATTAAATAATTTTATACATTCGGATGTCATCTCTGCTCTCAAGGTTGTTTTTCAGTTTGACCATACACTCTTTTAAAAGGACGAGGGAAGCATAGTGTTCTTTGTGGTTCTGCATTTTGAATAAAGCTTCGTTTGGATTGAGGTGTGGATTAGTATTGTAACGGCCCAGATCTACCGCTGAAACCTTCTCCTAGCAGACGCGTTTTAAAGCCTT

Coding sequence (CDS)

ATGGAGCAGTCTATATCATCACTGGCATTCAAGGGATCCGTGCCTGAAGCAATTATCGAATCCAAAAATCAAAAAAAACTATTTGTGGTTTATATTTCCGGTGATGATGCTGAATCAAGCAGTTTGGAAAGTTCAACTTGGACAAGTTCAAGGGTGGCTGAAGCAGTGTCAAAATACTGCGTTTTATTGCATATTCCTGCTGGAAGCTCTGATGCTGCTCAGTTTTCATCGATATACCCGCAGAAATCTGTACCATGTATAACAGCTGTTGGATACAATGGTATACAACTTTGGCAAAATGAGGGCTTTGTTGGTGCTGAGGTTTTGGCTTCCAGTTTAGAGAAGGCATGGTTGGGTCTTCATATCCAGGAAACAACCGCATCTGTTTTGACGGCAGCCCTTGCTTCAAAGAAGTCTGAGGCATCTACTTCGAGGCCTTCTGATTCAGGGAGTTCCTCTTTGGCAGCTGTTTCTCATGCAGATCATCATATTGATTCCTCAGAGACTAATCTGGGTGTCAATAGTTGTGTAGCAGAGGAAGAGAAAGGGACTGAAAATTCCTCTAAAAAAAGGAAGGAGCCTGAAAAACGAGTCAAGGAGGAAGACATCAAATCAGATGTTAAGGAGTCCACTGTACATCATTCTGTGAGTGTTGGGAATAATAATGAATCCCCTGATCCCTCTGAGAATAATAAAGGCTCATTGGCTGATCCTGGAGGCCAGAAAAACTGTTCTTCTGAAAATACTTCCACAATTGTGCACGACTCTCCTATCATTCCAAACCATATTGAGTCATGTCAATCAGGAGCTTCAAGACCAATTCCTCCAGAAACCAAGGAAGTGGCCCAACAAGAAAAGAACAAAATTGTGGATGAGAATAATGCTATTGAAAATGGCAGTGCCCCCAAGAACTACACTTCAAGTGATATTCATTTAAACATTCGGCTGCTGAATGGTGTTAACGTCCAGGAGAAGTTCTCCAAGACAAGCACCTTGAGAATGGTCAAAGACTACGTGGATAACAGCCAGGAAAGTACCTTTGGATCTTATGATTTAGCTGTTCCATATCCACGCAAGGTTTTCACAGATCAAGATTTGGAGAAATCATTGTCTTACTTGGGCCTTTCTAATAGACAATCATTGATAATGGTTCGACATCTGGGAGTTACTCGTGATTTCAGGGGAGCATCCTCCTCTGCTGATCAAAGAAATTCTGCAGCCAATGGTGGATCTTCAGATGAAAACGGTAGTGAATTTTCAGAAGTAGAGAGGCGCCATGTCCGCCAACCAAACCAAGGAACTGCAACAACGAGCGGAAACAATACCCGTGGGAAGCAACCATTGTCAACAGCTAGATTTGGAGCAAATATTCATAGCATTCATACGTTGAAGAAGGATGAAGACGACGAACGGTTCAAAGGTAGGAATTCCTTTTGGAATGGTAATTCTACTGAGTATGGTGGTGATGATGGTGATAGCAAATGA

Protein sequence

MEQSISSLAFKGSVPEAIIESKNQKKLFVVYISGDDAESSSLESSTWTSSRVAEAVSKYCVLLHIPAGSSDAAQFSSIYPQKSVPCITAVGYNGIQLWQNEGFVGAEVLASSLEKAWLGLHIQETTASVLTAALASKKSEASTSRPSDSGSSSLAAVSHADHHIDSSETNLGVNSCVAEEEKGTENSSKKRKEPEKRVKEEDIKSDVKESTVHHSVSVGNNNESPDPSENNKGSLADPGGQKNCSSENTSTIVHDSPIIPNHIESCQSGASRPIPPETKEVAQQEKNKIVDENNAIENGSAPKNYTSSDIHLNIRLLNGVNVQEKFSKTSTLRMVKDYVDNSQESTFGSYDLAVPYPRKVFTDQDLEKSLSYLGLSNRQSLIMVRHLGVTRDFRGASSSADQRNSAANGGSSDENGSEFSEVERRHVRQPNQGTATTSGNNTRGKQPLSTARFGANIHSIHTLKKDEDDERFKGRNSFWNGNSTEYGGDDGDSK

Homology

[Close]

BLAST of Cp4.1LG17g10040 vs. Swiss-Prot
Match: PUX11_ARATH (Plant UBX domain-containing protein 11 OS=Arabidopsis thaliana GN=PUX11 PE=1 SV=2)

HSP 1 Score: 277.3 bits (708), Expect = 3.2e-73
Identity = 220/535 (41.12%), Postives = 282/535 (52.71%), Query Frame = 1


Query: 3   QSISSLAFKGSVPEAIIESKNQKKLFVVYISGDDAESSSLESSTWTSSRVAEAVSKYCVL 62
           +++SSL FKGS+PEAI E+K +KKLFVVYISG+D ES  L   TWT + VA+++SKYC+L
Sbjct: 2   EALSSLTFKGSLPEAIFEAKGKKKLFVVYISGEDEESDKLNRLTWTDASVADSLSKYCIL 61

Query: 63  LHIPAGSSDAAQFSSIYPQKSVPCITAVGYNGIQLWQNEGFVGAEVLASSLEKAWLGLHI 122
           +HI AGS DA  FS+IYP  SVPCI A+G++G Q+W+ EGF+ AE LASSLEKAWLGLHI
Sbjct: 62  VHIQAGSVDATNFSAIYPYSSVPCIAAIGFSGTQVWRTEGFITAEDLASSLEKAWLGLHI 121

Query: 123 QETTASVLTAA-----LASKKSEAST------SRPSDSGSSSLAAVSHADHHIDSSETNL 182
           QETTAS+ +AA       +  S AS+      S P D+  +S +  S     +  SET  
Sbjct: 122 QETTASIFSAALASQNSETPVSSASSVVLPPGSVPLDAAVASPSTASS----VQPSETKS 181

Query: 183 GVNSC-VAEEEKGTEN-SSKKRKEPEK---RVKEEDIKS-DVKESTVHHSVSVGNNNESP 242
            V S    E   GT     K+  EP       K +   S D  ++ V H  +     E+P
Sbjct: 182 TVTSASTTENNDGTVAVKGKESAEPSNLCDTTKNQPAPSVDGTKANVEHEAT-----ETP 241

Query: 243 DPSENNKGSLAD--PGGQKNCSSENTSTIVHDSPIIPNHIESCQSGASRPIPPETKEVAQ 302
              +  K  +    PG   N S   +S           + E    G S      TK V  
Sbjct: 242 LRVQAEKEPIRPTAPGTNDNTSRVRSSVDRKRKQGTVINEEDSGVGVSGRDINLTKSVDT 301

Query: 303 QEKNKIVDENNAIENGSAPKNYTSSDIHLNIRLLNGVNVQEKFSKTSTLRMVKDYVDNSQ 362
           +E  K  DE    E+G   K   +SD+HLNIRL +G ++QEKFS TS LRMVKDYV+++Q
Sbjct: 302 KETMKPKDEGGEEEDGEKSKK--ASDVHLNIRLPDGSSLQEKFSVTSILRMVKDYVNSNQ 361

Query: 363 ESTFGSYDLAVPYPRKVFTDQDLEKSLSYLGLSNRQSLIMVRHLGVTRDFRGASSSADQR 422
               G+YDLAVPYPRKV+TDQDL+KSLS L L +RQ+L++V     T   RG S S    
Sbjct: 362 TIGLGAYDLAVPYPRKVYTDQDLDKSLSELRLFDRQALVVVPRKRATVYQRGTSYSESNN 421

Query: 423 NSAANGGS------------------SDENGSEFSEVERRHVRQPNQGTATTSGNNTRGK 482
           N+  N G                        +  S V  R  R PN       G      
Sbjct: 422 NTDPNSGGYFAYVRRVLSYANPFSYFGGGTANASSSVPERQTR-PNTEVRNNLGQVGTSF 481

Query: 483 QPLSTARFGANIH---------SIHTLKKDEDDERFKGRNSFWNGNSTEYGGDDG 492
           Q  S  R               +IHTL  +ED+  F   N+FWNGNST+YGG  G
Sbjct: 482 QDPSEGRSNVRNRRPTTSRIGSNIHTLNHNEDEAPFGDGNAFWNGNSTQYGGGSG 524

[Close]

BLAST of Cp4.1LG17g10040 vs. Swiss-Prot
Match: UBXN4_HUMAN (UBX domain-containing protein 4 OS=Homo sapiens GN=UBXN4 PE=1 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 5.4e-12
Identity = 92/413 (22.28%), Postives = 176/413 (42.62%), Query Frame = 1


Query: 8   LAFKGSVPEAIIESKNQKKLFVVYISGDDAESSSLESSTWTSSRVAEAVSKYCVLLHIPA 67
           L F+G++P AI  +K    +FVV+++GDD +S+ + +S W   +V EA S   V + I  
Sbjct: 2   LWFQGAIPAAIATAKRSGAVFVVFVAGDDEQSTQMAAS-WEDDKVTEASSNSFVAIKIDT 61

Query: 68  GSSDAAQFSSIYPQKSVPCITAVGYNGIQLWQNEGFVGAEVLASSLEKAWLGLHIQETTA 127
            S    QFS IYP   VP    +G +GI L    G V A+ L + + K    +H+ ++  
Sbjct: 62  KSEACLQFSQIYPVVCVPSSFFIGDSGIPLEVIAGSVSADELVTRIHKV-RQMHLLKSET 121

Query: 128 SVLTAALASKKSEASTSRPS--------------------------DSGSSSLAAVSHAD 187
           SV   +    +SE+S S PS                          D+ S +      A 
Sbjct: 122 SVANGS----QSESSVSTPSASFEPNNTCENSQSRNAELCEIPPTSDTKSDTATGGESAG 181

Query: 188 HHIDSSETNLGVNSCVAEE-----EKGTENSSKKRKEPEKRVKEEDIKSDVKESTVHHSV 247
           H   S E +   +   AE+     E+ T+   ++R+E  K  ++ +IK +++       +
Sbjct: 182 HATSSQEPSGCSDQRPAEDLNIRVERLTKKLEERREEKRKEEEQREIKKEIERRKTGKEM 241

Query: 248 SVGNNNESPDPS-----ENNKGSLADPGGQKNCSSENTSTIVHDSPIIPNHIESCQSGAS 307
                 +  + +     E N+    D   ++    +        +       E  ++  +
Sbjct: 242 LDYKRKQEEELTKRMLEERNREKAEDRAARERIKQQIALDRAERAARFAKTKEEVEAAKA 301

Query: 308 RPIPPETKEVAQQEKNKIVDENNAIENGSAPKNYTSSDIHLNIRLLNGVNVQEKFSKTST 367
             +      +A+Q + ++  E+ A E  +  +        +  RL +G +   +F   + 
Sbjct: 302 AAL------LAKQAEMEVKRESYARERSTVAR--------IQFRLPDGSSFTNQFPSDAP 361

Query: 368 LRMVKDYVDNSQESTFGSYDLAVPYPRKVFTDQDLEKSLSYLGLSNRQSLIMV 385
           L   + +   +  +T+G++ LA  +PR+ FT +D +K L  L L+   S++++
Sbjct: 362 LEEARQFAAQTVGNTYGNFSLATMFPRREFTKEDYKKKLLDLELAPSASVVLL 394

[Close]

BLAST of Cp4.1LG17g10040 vs. Swiss-Prot
Match: UBXN4_PONAB (UBX domain-containing protein 4 OS=Pongo abelii GN=UBXN4 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 7.0e-12
Identity = 92/413 (22.28%), Postives = 176/413 (42.62%), Query Frame = 1


Query: 8   LAFKGSVPEAIIESKNQKKLFVVYISGDDAESSSLESSTWTSSRVAEAVSKYCVLLHIPA 67
           L F+G++P AI  +K    +FVV+++GDD +S+ + +S W   +V EA S   V + I  
Sbjct: 2   LWFQGAIPAAIATAKRSGAVFVVFVAGDDEQSTQMAAS-WEDDKVTEASSNSFVAIKIDT 61

Query: 68  GSSDAAQFSSIYPQKSVPCITAVGYNGIQLWQNEGFVGAEVLASSLEKAWLGLHIQETTA 127
            S    QFS IYP   VP    +G +GI L    G V A+ L + + K    +H+ ++  
Sbjct: 62  KSEACLQFSQIYPVVCVPSSFFIGDSGIPLEVIAGSVSADELVTRIHKV-RQMHLLKSET 121

Query: 128 SVLTAALASKKSEASTSRPS--------------------------DSGSSSLAAVSHAD 187
           SV   +    +SE+S S PS                          D+ S +      A 
Sbjct: 122 SVANGS----QSESSVSTPSASFEPNNTCENSQSRNAELCEIPPTSDTKSDTATGGESAG 181

Query: 188 HHIDSSETNLGVNSCVAEE-----EKGTENSSKKRKEPEKRVKEEDIKSDVKESTVHHSV 247
           H   S E +   +   AE+     E+ T+   ++R+E  K  ++ +IK +++       +
Sbjct: 182 HATSSQEPSGCSDQRPAEDLNIRVERLTKKLEERREEKRKEEEQREIKKEIERRKTGKEM 241

Query: 248 SVGNNNESPDPS-----ENNKGSLADPGGQKNCSSENTSTIVHDSPIIPNHIESCQSGAS 307
                 +  + +     E N+    D   ++    +        +       E  ++  +
Sbjct: 242 LDYKRKQEEELTKRMLEERNREKAEDRAARERIKQQIALDRAERAARFAKTKEEVEAAKA 301

Query: 308 RPIPPETKEVAQQEKNKIVDENNAIENGSAPKNYTSSDIHLNIRLLNGVNVQEKFSKTST 367
             +      +A+Q + ++  E+ A E  +  +        +  RL +G +   +F   + 
Sbjct: 302 AAL------LAKQAEMEVKRESYARERSTVAR--------IQFRLPDGSSFTNQFPSDAP 361

Query: 368 LRMVKDYVDNSQESTFGSYDLAVPYPRKVFTDQDLEKSLSYLGLSNRQSLIMV 385
           L   + +   +  +T+G++ LA  +PR+ FT +D +K L  L L+   S++++
Sbjct: 362 LEEARQFAAQTVGNTYGNFSLATMFPRREFTKEDYKKKLLDLELAPSASVVVL 394

[Close]

BLAST of Cp4.1LG17g10040 vs. Swiss-Prot
Match: UBXN4_RAT (UBX domain-containing protein 4 OS=Rattus norvegicus GN=Ubxn4 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.9e-09
Identity = 97/407 (23.83%), Postives = 170/407 (41.77%), Query Frame = 1


Query: 8   LAFKGSVPEAIIESKNQKKLFVVYISGDDAESSSLESSTWTSSRVAEAVSKYCVLLHIPA 67
           L F+G++P AI  +K    +FVV+++GDD +S+ + +S W   +V EA S   V + I  
Sbjct: 2   LWFQGAIPAAIASAKRSGAVFVVFVAGDDEQSTQMAAS-WEDEKVREASSDNFVAIKIDT 61

Query: 68  GSSDAAQFSSIYPQKSVPCITAVGYNGIQLWQNEGFVGAEVLASSLEKAWLGLHIQETTA 127
            S    QFS IYP   VP    +G +GI L    G V A+ L + + K    +H  +   
Sbjct: 62  KSEACLQFSQIYPVVCVPSSFFIGDSGIPLEVIAGSVSADELVTRIHKVQQ-MHSLKGET 121

Query: 128 SVLTAALASKKSEASTSRPS-------------------------DSGSSSLAAVSHADH 187
           SV       K+SE+S S PS                         D  S + A    A H
Sbjct: 122 SVTN----DKQSESSVSTPSASFEPDICESAESRNTELCETPTTSDPKSDTAAGGECAGH 181

Query: 188 HIDSSETNLGVNSCVAEE-----EKGTENSSKKRKEPEKRVKEEDIKSDVKESTVHHSVS 247
              S E     N   AE+     E+ T+   ++R+E  K   + +IK +++       + 
Sbjct: 182 DSLSQEPPGCSNQRPAEDLTVRVERLTKKLEERREEKRKEEAQREIKKEIERRKTGKEML 241

Query: 248 VGNNNESPDPSENNKGSLADPGGQKNCSSENTSTIVHDSPIIPNHIESCQSGASRPIPPE 307
              + +     E  K  L +   +K  + +  +       I  +  E     A       
Sbjct: 242 ---DYKRKQEEELTKRMLEERSREK--AEDRAARERIKQQIALDRAERAARFAKTKEAEA 301

Query: 308 TKEVAQQEKNKIVDENNAIENGSAPKNYTSSDIHLNIRLLNGVNVQEKFSKTSTLRMVKD 367
            K  A   K    +    ++  S+ ++  S+   +  RL +G +   +F   + L   + 
Sbjct: 302 AKAAALLAKQAEAE----VKRESSTRD-RSTIARIQFRLPDGSSFTNQFPSDAPLEEARQ 361

Query: 368 YVDNSQESTFGSYDLAVPYPRKVFTDQDLEKSLSYLGLSNRQSLIMV 385
           +   +  +T+G++ LA  +PR+ FT +D ++ L  L L+   S++++
Sbjct: 362 FAAQTVGNTYGNFSLATMFPRREFTREDYKRKLLDLELAPSASVVLL 392

[Close]

BLAST of Cp4.1LG17g10040 vs. Swiss-Prot
Match: UBXN4_MOUSE (UBX domain-containing protein 4 OS=Mus musculus GN=Ubxn4 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.6e-08
Identity = 94/407 (23.10%), Postives = 169/407 (41.52%), Query Frame = 1


Query: 8   LAFKGSVPEAIIESKNQKKLFVVYISGDDAESSSLESSTWTSSRVAEAVSKYCVLLHIPA 67
           L F+G++P AI  +K    +FVV+++GDD +S  + +S W   +V +A S   V + I  
Sbjct: 2   LWFQGAIPAAIASAKRSGAVFVVFVAGDDEQSIQMAAS-WEDEKVTQASSNNFVAIKIDT 61

Query: 68  GSSDAAQFSSIYPQKSVPCITAVGYNGIQLWQNEGFVGAEVLASSLEKAWLGLHIQETTA 127
            S    QFS IYP   VP    +G +GI L    G V A+ L + + K    +H  +  A
Sbjct: 62  KSEACLQFSQIYPVVCVPSSFFIGDSGIPLEVIAGSVSADELVTRIHKVQQ-MHSSKGEA 121

Query: 128 SVLTAALASKKSEASTSRPS-------------------------DSGSSSLAAVSHADH 187
           SV        +SE+S S PS                         D  S +        H
Sbjct: 122 SVTN----DNQSESSVSTPSASFEPDVCENPESKNTELCETPATSDIKSDTATGGECTGH 181

Query: 188 HIDSSETNLGVNSCVAEE-----EKGTENSSKKRKEPEKRVKEEDIKSDVKESTVHHSVS 247
              S E +   N   AE+     E+ T+   ++R+E  K   + +IK +++       + 
Sbjct: 182 DSHSQEPHGCSNQRPAEDLTVRVERLTKKLEERREEKRKEEAQREIKKEIERRKTGKEML 241

Query: 248 VGNNNESPDPSENNKGSLADPGGQKNCSSENTSTIVHDSPIIPNHIESCQSGASRPIPPE 307
              + +     E  K  L +   +K  + +  +       I  +  E     A+R    +
Sbjct: 242 ---DYKRKQEEELTKRMLEERSREK--AEDRAARERIKQQIALDRAER----AARFAKTK 301

Query: 308 TKEVAQQEKNKIVDENNAIENGSAPKNYTSSDIHLNIRLLNGVNVQEKFSKTSTLRMVKD 367
             E A+            ++  S  ++  S+   +  RL +G +   +F   + L   + 
Sbjct: 302 EAEAAKAAALLTKQAGTEVKRESTARD-RSTIARIQFRLPDGSSFTNQFPSDAPLEEARQ 361

Query: 368 YVDNSQESTFGSYDLAVPYPRKVFTDQDLEKSLSYLGLSNRQSLIMV 385
           +   +  +T+G++ LA  +PR+ FT +D ++ L  L L+   S++++
Sbjct: 362 FAAQTVGNTYGNFSLATMFPRREFTREDYKRRLLDLELAPSASVVLL 392

[Close]

BLAST of Cp4.1LG17g10040 vs. TrEMBL
Match: A0A0A0KC97_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G041180 PE=4 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 6.5e-166
Identity = 352/538 (65.43%), Postives = 396/538 (73.61%), Query Frame = 1


Query: 1   MEQSISSLAFKGSVPEAIIESKNQKKLFVVYISGDDAESSSLESSTWTSSRVAEAVSKYC 60
           MEQSISSLAFKGS+ EAI+ESKNQ+KLF+VYISGDDAESS LESSTWTSS+VAE+VSKYC
Sbjct: 1   MEQSISSLAFKGSIAEAIVESKNQRKLFLVYISGDDAESSRLESSTWTSSKVAESVSKYC 60

Query: 61  VLLHIPAGSSDAAQFSSIYPQKSVPCITAVGYNGIQLWQNEGFVGAEVLASSLEKAWLGL 120
           VLLHIPAGS DAAQFSSIYPQKSVPCITAVGYNGIQLW NEGF+GAEVLAS+LEKAWLGL
Sbjct: 61  VLLHIPAGSMDAAQFSSIYPQKSVPCITAVGYNGIQLWLNEGFIGAEVLASNLEKAWLGL 120

Query: 121 HIQETTASVLTAALASKKSEASTSRPSDSGSSSLAAVSHADHHIDSSETNLGVNSCVAEE 180
           HIQETTASVLTAALASKKSEASTSRPSD  SSSLA+VS +DHHI S ETNLGVNS + EE
Sbjct: 121 HIQETTASVLTAALASKKSEASTSRPSDLRSSSLASVSPSDHHIGSLETNLGVNSGIVEE 180

Query: 181 EKGTENSSKKRKEPEKRVKEEDIKSDVKESTVHHSVSV---GNNNESPDPSENNKGSLAD 240
           EKG          PEK VK+ED K+D+KES VHHS+SV    N+  SP+PS  +K SLA 
Sbjct: 181 EKG----------PEKLVKQEDSKADIKESNVHHSLSVEIQNNDESSPEPSGKDKSSLAH 240

Query: 241 PGGQKNCSSENTSTIVHDSPIIPNHIESCQSGASRPIPPETKEVAQQEKNKIVDENNAIE 300
           P  Q++CS ENTS IV+DS   PN IES QSGA +PI  E KE  ++ K +IVD+NNAIE
Sbjct: 241 PQDQQSCSPENTSKIVNDSYTTPNLIESSQSGAPQPISLEAKEDVRENK-EIVDDNNAIE 300

Query: 301 NGSAPKNYTSSDIHLNIRLLNGVNVQEKFSKTSTLRMVKDYVDNSQESTFGSYDLAVPYP 360
           N SA K+Y S+D+HLNIRLLNG+N+QEKFSKTSTLRM+KDYVDNSQ STFG YDLA+PYP
Sbjct: 301 NDSARKDYASNDVHLNIRLLNGINLQEKFSKTSTLRMIKDYVDNSQPSTFGPYDLAIPYP 360

Query: 361 RKVFTDQDLEKSLSYLGLSNRQSLIMVRHLGVTRDFRGASSSADQRNSAANGGSSDENGS 420
           RKVFTDQDL KSLS LGL NRQ+LIMVRH GV  D RGASSS+D+R  +ANG SSDEN  
Sbjct: 361 RKVFTDQDLGKSLSDLGLHNRQALIMVRHQGVRSDLRGASSSSDERKFSANGVSSDENSD 420

Query: 421 EFSEVERRHV------------------RQPNQGTATTSGNNTR-------GKQPLSTAR 480
            +    +R +                  R   QG A    NN+         K    TA 
Sbjct: 421 GYFAFVKRILSYVNPFSYLGVGASTASSRHETQGDARQYSNNSLEAEDHYVRKPNQGTAM 480

Query: 481 FGANIHSIHTL----------------KKDEDDERFKGRNSFWNGNSTEYGGDDGDSK 495
            G N                       K D+D+ERFK RNSFWNGNSTEYGGD+ DSK
Sbjct: 481 VGGNNTRGKQPSSSSRFGANIHSIHTLKHDDDEERFKSRNSFWNGNSTEYGGDN-DSK 526

[Close]

BLAST of Cp4.1LG17g10040 vs. TrEMBL
Match: B9HHD9_POPTR (UBX domain-containing family protein OS=Populus trichocarpa GN=POPTR_0007s02410g PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 2.4e-96
Identity = 245/530 (46.23%), Postives = 314/530 (59.25%), Query Frame = 1


Query: 1   MEQSISSLAFKGSVPEAIIESKNQKKLFVVYISGDDAESSSLESSTWTSSRVAEAVSKYC 60
           M+ SISS  +KGS+ EAI+ESK QKKLFVVYISG++  S+ LE STWT S+VAE++SKYC
Sbjct: 1   MKGSISSFTYKGSIAEAILESKKQKKLFVVYISGENVASAELEKSTWTDSKVAESLSKYC 60

Query: 61  VLLHIPAGSSDAAQFSSIYPQKSVPCITAVGYNGIQLWQNEGFVGAEVLASSLEKAWLGL 120
           +LLHIP GS+DA  FS+IY QKS PCITA+GYNG+QLWQ+EGFV AEVLAS LEK WL L
Sbjct: 61  ILLHIPEGSTDALNFSAIYQQKSAPCITAIGYNGVQLWQSEGFVTAEVLASGLEKVWLTL 120

Query: 121 HIQETTASVLTAALASKKSEASTSRPSDSGSS-------SLAAVSHADHHIDSSETNL-G 180
           HIQETTA+VLT ALASKK E   S  SD GSS       ++  V   D HI  SE     
Sbjct: 121 HIQETTATVLTTALASKKPEP-LSGSSDIGSSGQGSSSGTVVPVPLKDRHIQPSEVGTQA 180

Query: 181 VNSCVAEEEKGTENSSKKRKEPEKRVKEEDIKSDVKESTVHHSVSVGNNNESPDPSENNK 240
             S V EE K  E ++      EK +     K+  K   V  S +VG+   +    E+ K
Sbjct: 181 AASEVIEENKSHEPTA------EKTITNLGDKTSSKSFNVQKSQTVGDERSTCPTEEDKK 240

Query: 241 GSLADPGGQKNCSSENTSTIVHDSPI-----IPNHIESCQSGASRPIPPETKEVAQQEKN 300
              +      N  +++TS+   D  +     + NH     +G S     E KEV  ++  
Sbjct: 241 SPSSSVTSTDNIIADHTSSAAEDGLLAQEKSVSNHT-GVPTGGSELSTTEIKEVGDKKAE 300

Query: 301 KIVDENNAIENGSAPKNYTSSDIHLNIRLLNGVNVQEKFSKTSTLRMVKDYVDNSQESTF 360
            + D      N +   N  SSD+HLNIRL +GV++QEKFS TSTLR VKDYVD +Q S  
Sbjct: 301 SMDDMVPGTLNNNKKVN-VSSDVHLNIRLPDGVSLQEKFSVTSTLRTVKDYVDRNQASGI 360

Query: 361 GSYDLAVPYPRKVFTDQDLEKSLSYLGLSNRQSLIMVRHLGVTRDFRGASSSADQRNSAA 420
           G+YDLA+PYPRK F+DQDL KSLS L L NRQ+LI+V     T   +  S S     + +
Sbjct: 361 GAYDLAIPYPRKTFSDQDLNKSLSELSLLNRQALIVVPRQRATSYHQRGSLSDRATTTTS 420

Query: 421 NGGSSDENGSEFSEVER---------------------------RHVRQPNQGTATTSGN 480
           +G  +  +G  F+ V+R                                 +Q +++T  N
Sbjct: 421 SGSVNANDGGYFAYVKRILSYVNPLSYFGGSANPSSSGQAQSAIGEYEWTDQNSSSTGRN 480

Query: 481 NTRGKQPLSTARFGANIHSIHTLKKDEDDERFKGRNSFWNGNSTEYGGDD 491
           +++GKQP +T+R G+NIH   TLK DEDD RF  RNSFWNGNST+YGGD+
Sbjct: 481 DSKGKQP-TTSRVGSNIH---TLKHDEDDGRFSERNSFWNGNSTQYGGDN 517

[Close]

BLAST of Cp4.1LG17g10040 vs. TrEMBL
Match: A0A061EJB9_THECC (Ubiquitin-like superfamily protein, putative isoform 3 OS=Theobroma cacao GN=TCM_020101 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 8.1e-92
Identity = 246/542 (45.39%), Postives = 316/542 (58.30%), Query Frame = 1


Query: 1   MEQS--ISSLAFKGSVPEAIIESKNQKKLFVVYISGDDAESSSLESSTWTSSRVAEAVSK 60
           ME+S  +SSL +KGS+PEAI+E+KNQKKLFVVYISGDDAES +LE STWT  +V E++SK
Sbjct: 1   MERSECLSSLTYKGSIPEAILEAKNQKKLFVVYISGDDAESKNLEDSTWTDLKVKESLSK 60

Query: 61  YCVLLHIPAGSSDAAQFSSIYPQKSVPCITAVGYNGIQLWQNEGFVGAEVLASSLEKAWL 120
           YC+LLHI  GS+DAA FS+IYPQKSVPCITA+GYNG+Q WQ+EG V AEVLASSLEKAWL
Sbjct: 61  YCILLHIQGGSADAANFSAIYPQKSVPCITAIGYNGVQAWQSEGSVSAEVLASSLEKAWL 120

Query: 121 GLHIQETTASVLTAALASKKSEASTS-----RPSDSGSSSLAAVSHADHHIDSSETNLGV 180
            LHIQETT +VLTAALASKK E STS     R S+ GSSS  +V  +  +  S  +   V
Sbjct: 121 SLHIQETTVTVLTAALASKKYETSTSGASTVRQSEHGSSSSNSVPSSTMNERSLGSKSAV 180

Query: 181 NSCVAEEEKGTENSSKKRKEPEKRVKEEDIKSDVKESTVHHSVSVGNNNESPDPSENNKG 240
           +S V EE   +EN+ K     EK  +  D  S    ST + +  V    ++ + +     
Sbjct: 181 SSGVIEENFVSENTVK-----EKNAESVDKGSSESFSTDNLANVVDEQGDASNEATRTMA 240

Query: 241 SLADPGGQKNCSSENTSTIVHDSPIIPNHIESCQSGASRPI-PPETKEVAQQEKNKIVDE 300
           S    G   +  SENTS+   D  +IP    + Q+  S P+   E +E  Q EK+K +++
Sbjct: 241 SSITVGPAVSL-SENTSSPPEDGCLIPVKGINNQASVSSPVSAAEAEEAVQHEKDKGIND 300

Query: 301 NNAIENGSAPKNYTS---SDIHLNIRLLNGVNVQEKFSKTSTLRMVKDYVDNSQESTFGS 360
               E+G + K  T+   +D+HLNIRL +G +++EKF    TLRMVKDYVD +Q S  GS
Sbjct: 301 K---EDGGSDKPSTANIPTDVHLNIRLPDGSSLREKFPVADTLRMVKDYVDRNQSSGMGS 360

Query: 361 YDLAVPYPRKVFTDQDLEKSLSYLGLSNRQSLIMVRHLGVTRDFRGASSSADQRNSAANG 420
           YDLA+PYPRK+F DQDL KSL  LGL NRQ+L++V  L  T  F+G  +SADQ NS    
Sbjct: 361 YDLAIPYPRKLFGDQDLSKSLLDLGLLNRQALVVV-PLQRTSGFQGQRTSADQINSTPTE 420

Query: 421 GSSDENGSEFSEVER--RHVR-------------------------QPNQGTATTSGNNT 480
            S+  NG  F+ ++    +V                           PN           
Sbjct: 421 ASTGSNGGYFAYIKSILSYVNPFSYLGGGASSSTTEQESQSGIWEYSPNPTMQNNLAGTI 480

Query: 481 RGKQPLSTARFGANIHSIHTL---------------KKDEDDERFKGRNSFWNGNSTEYG 490
           R   P S     + +    +                K DEDD RF  RN FWNGNST+YG
Sbjct: 481 RSYSPYSPNGSTSTVRDGSSNRRPTTSRYGSNIHTLKHDEDDGRFNDRNPFWNGNSTQYG 532

[Close]

BLAST of Cp4.1LG17g10040 vs. TrEMBL
Match: M5XDI9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003931mg PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 3.1e-91
Identity = 236/539 (43.78%), Postives = 319/539 (59.18%), Query Frame = 1


Query: 1   MEQSISSLAFKGSVPEAIIESKNQKKLFVVYISGDDAESSSLESSTWTSSRVAEAVSKYC 60
           ME S++SL +KGS+PEAI E+K Q+KLFVVYISG + ESS LE+STWT   VA++V+KYC
Sbjct: 1   MEPSLTSLTYKGSIPEAITEAKKQRKLFVVYISGKNDESSRLENSTWTDVNVADSVAKYC 60

Query: 61  VLLHIPAGSSDAAQFSSIYPQKSVPCITAVGYNGIQLWQNEGFVGAEVLASSLEKAWLGL 120
           +LLHIP  S+DAA FS+IYPQKS+PCITA+GYNG+Q+WQNEGFV AEVLASSLEKAWLG+
Sbjct: 61  LLLHIPEESTDAANFSAIYPQKSIPCITAIGYNGVQIWQNEGFVSAEVLASSLEKAWLGI 120

Query: 121 HIQETTASVLTAALASKKSEASTSRPSDSGSSSLAAVSHADHHIDSSET----NLGVNSC 180
           HIQETTA+VL+AALAS  SE STS   ++ S+   + S  +    SS      ++  N  
Sbjct: 121 HIQETTATVLSAALASNNSEPSTSGVPNTVSTDEGSSSSTNQGRSSSAAVPLPSIDTNDQ 180

Query: 181 VAEEEKGTENSSKKRKEPEKRVKEEDIKSDVKESTVH---HSVSVGNNNESPDPSENNKG 240
             +      ++ KK K  + RV+E++     K S+     + +    + +S  P ++ +G
Sbjct: 181 SPDAIDAVSDTVKKNKGRDCRVEEKNNDLGYKTSSKSFDANGLECVGDEQSSSPMKSAQG 240

Query: 241 -SLADPGGQKNCSSENTSTIVHDSPIIPNHIESCQSG----ASRPIPPETKEVAQQEKNK 300
               D     N  ++N S+I       P       SG    AS+    E  E  Q E+ +
Sbjct: 241 VQDIDMEDLNNSGADNVSSIAEVGYSGPEKTTLNHSGVSGEASQAYSSEKNEALQVERGE 300

Query: 301 IVDENNAIENGSAPKNYTSSDIHLNIRLLNGVNVQEKFSKTSTLRMVKDYVDNSQESTFG 360
           + D+          +   SSD+HLNIRL NGV++++KFS TST+RMVKDYVD +Q S  G
Sbjct: 301 VKDDKKVDAFEKCTEVSKSSDVHLNIRLPNGVSLKQKFSVTSTVRMVKDYVDENQGSGIG 360

Query: 361 SYDLAVPYPRKVFTDQDLEKSLSYLGLSNRQSLIMVRHLGVTRDFRGASSSADQRNSAAN 420
           +YDLA+PYPRKVF++Q+L +SLS LGL +RQ+LI+V H   T   RG S+ ++Q +S   
Sbjct: 361 TYDLAIPYPRKVFSNQELNESLSDLGLFDRQALIVVPHQQGTSYQRGRSAFSEQIDSRNT 420

Query: 421 GGSSD-ENGSEFSEVE---------RRHVRQPNQGTATTSGNNTRGKQPLSTARFGANIH 480
           G SS+  NG  FS V+                N  ++     N   +   ++AR   +  
Sbjct: 421 GSSSNGSNGGYFSYVKGFLSYFNPLSYFGGGANSSSSGQQSQNGMWEYSPNSARQNNSTE 480

Query: 481 S-----------------------IHTLKKDEDDERFKGRNSFWNGNSTEYGGDDGDSK 495
           S                       IHTLK DEDDERF  RN+FWNGNST+YGG + D K
Sbjct: 481 SISTSSRNEGKKNRQPPASGFGSNIHTLKHDEDDERFSDRNAFWNGNSTQYGGGNDDGK 539

[Close]

BLAST of Cp4.1LG17g10040 vs. TrEMBL
Match: A0A061ERL5_THECC (Ubiquitin-like superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_020101 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 3.8e-89
Identity = 245/545 (44.95%), Postives = 315/545 (57.80%), Query Frame = 1


Query: 1   MEQS--ISSLAFKGSVPEAIIESKNQKKLFVVYISGDDAESSSLESSTWTSSRVAEAVSK 60
           ME+S  +SSL +KGS+PEAI+E+KNQKKLFVVYISGDDAES +LE STWT  +V E++SK
Sbjct: 13  MERSECLSSLTYKGSIPEAILEAKNQKKLFVVYISGDDAESKNLEDSTWTDLKVKESLSK 72

Query: 61  YCVLLHIPAGSSDAAQFSSI---YPQKSVPCITAVGYNGIQLWQNEGFVGAEVLASSLEK 120
           YC+LLHI  GS+DAA FS+I    PQKSVPCITA+GYNG+Q WQ+EG V AEVLASSLEK
Sbjct: 73  YCILLHIQGGSADAANFSAICILNPQKSVPCITAIGYNGVQAWQSEGSVSAEVLASSLEK 132

Query: 121 AWLGLHIQETTASVLTAALASKKSEASTS-----RPSDSGSSSLAAVSHADHHIDSSETN 180
           AWL LHIQETT +VLTAALASKK E STS     R S+ GSSS  +V  +  +  S  + 
Sbjct: 133 AWLSLHIQETTVTVLTAALASKKYETSTSGASTVRQSEHGSSSSNSVPSSTMNERSLGSK 192

Query: 181 LGVNSCVAEEEKGTENSSKKRKEPEKRVKEEDIKSDVKESTVHHSVSVGNNNESPDPSEN 240
             V+S V EE   +EN+ K     EK  +  D  S    ST + +  V    ++ + +  
Sbjct: 193 SAVSSGVIEENFVSENTVK-----EKNAESVDKGSSESFSTDNLANVVDEQGDASNEATR 252

Query: 241 NKGSLADPGGQKNCSSENTSTIVHDSPIIPNHIESCQSGASRPI-PPETKEVAQQEKNKI 300
              S    G   +  SENTS+   D  +IP    + Q+  S P+   E +E  Q EK+K 
Sbjct: 253 TMASSITVGPAVSL-SENTSSPPEDGCLIPVKGINNQASVSSPVSAAEAEEAVQHEKDKG 312

Query: 301 VDENNAIENGSAPKNYTS---SDIHLNIRLLNGVNVQEKFSKTSTLRMVKDYVDNSQEST 360
           +++    E+G + K  T+   +D+HLNIRL +G +++EKF    TLRMVKDYVD +Q S 
Sbjct: 313 INDK---EDGGSDKPSTANIPTDVHLNIRLPDGSSLREKFPVADTLRMVKDYVDRNQSSG 372

Query: 361 FGSYDLAVPYPRKVFTDQDLEKSLSYLGLSNRQSLIMVRHLGVTRDFRGASSSADQRNSA 420
            GSYDLA+PYPRK+F DQDL KSL  LGL NRQ+L++V  L  T  F+G  +SADQ NS 
Sbjct: 373 MGSYDLAIPYPRKLFGDQDLSKSLLDLGLLNRQALVVV-PLQRTSGFQGQRTSADQINST 432

Query: 421 ANGGSSDENGSEFSEVER--RHVR-------------------------QPNQGTATTSG 480
               S+  NG  F+ ++    +V                           PN        
Sbjct: 433 PTEASTGSNGGYFAYIKSILSYVNPFSYLGGGASSSTTEQESQSGIWEYSPNPTMQNNLA 492

Query: 481 NNTRGKQPLSTARFGANIHSIHTL---------------KKDEDDERFKGRNSFWNGNST 490
              R   P S     + +    +                K DEDD RF  RN FWNGNST
Sbjct: 493 GTIRSYSPYSPNGSTSTVRDGSSNRRPTTSRYGSNIHTLKHDEDDGRFNDRNPFWNGNST 547

[Close]

BLAST of Cp4.1LG17g10040 vs. TAIR10
Match: AT2G43210.1 (AT2G43210.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 277.3 bits (708), Expect = 1.8e-74
Identity = 220/535 (41.12%), Postives = 282/535 (52.71%), Query Frame = 1


Query: 3   QSISSLAFKGSVPEAIIESKNQKKLFVVYISGDDAESSSLESSTWTSSRVAEAVSKYCVL 62
           +++SSL FKGS+PEAI E+K +KKLFVVYISG+D ES  L   TWT + VA+++SKYC+L
Sbjct: 2   EALSSLTFKGSLPEAIFEAKGKKKLFVVYISGEDEESDKLNRLTWTDASVADSLSKYCIL 61

Query: 63  LHIPAGSSDAAQFSSIYPQKSVPCITAVGYNGIQLWQNEGFVGAEVLASSLEKAWLGLHI 122
           +HI AGS DA  FS+IYP  SVPCI A+G++G Q+W+ EGF+ AE LASSLEKAWLGLHI
Sbjct: 62  VHIQAGSVDATNFSAIYPYSSVPCIAAIGFSGTQVWRTEGFITAEDLASSLEKAWLGLHI 121

Query: 123 QETTASVLTAA-----LASKKSEAST------SRPSDSGSSSLAAVSHADHHIDSSETNL 182
           QETTAS+ +AA       +  S AS+      S P D+  +S +  S     +  SET  
Sbjct: 122 QETTASIFSAALASQNSETPVSSASSVVLPPGSVPLDAAVASPSTASS----VQPSETKS 181

Query: 183 GVNSC-VAEEEKGTEN-SSKKRKEPEK---RVKEEDIKS-DVKESTVHHSVSVGNNNESP 242
            V S    E   GT     K+  EP       K +   S D  ++ V H  +     E+P
Sbjct: 182 TVTSASTTENNDGTVAVKGKESAEPSNLCDTTKNQPAPSVDGTKANVEHEAT-----ETP 241

Query: 243 DPSENNKGSLAD--PGGQKNCSSENTSTIVHDSPIIPNHIESCQSGASRPIPPETKEVAQ 302
              +  K  +    PG   N S   +S           + E    G S      TK V  
Sbjct: 242 LRVQAEKEPIRPTAPGTNDNTSRVRSSVDRKRKQGTVINEEDSGVGVSGRDINLTKSVDT 301

Query: 303 QEKNKIVDENNAIENGSAPKNYTSSDIHLNIRLLNGVNVQEKFSKTSTLRMVKDYVDNSQ 362
           +E  K  DE    E+G   K   +SD+HLNIRL +G ++QEKFS TS LRMVKDYV+++Q
Sbjct: 302 KETMKPKDEGGEEEDGEKSKK--ASDVHLNIRLPDGSSLQEKFSVTSILRMVKDYVNSNQ 361

Query: 363 ESTFGSYDLAVPYPRKVFTDQDLEKSLSYLGLSNRQSLIMVRHLGVTRDFRGASSSADQR 422
               G+YDLAVPYPRKV+TDQDL+KSLS L L +RQ+L++V     T   RG S S    
Sbjct: 362 TIGLGAYDLAVPYPRKVYTDQDLDKSLSELRLFDRQALVVVPRKRATVYQRGTSYSESNN 421

Query: 423 NSAANGGS------------------SDENGSEFSEVERRHVRQPNQGTATTSGNNTRGK 482
           N+  N G                        +  S V  R  R PN       G      
Sbjct: 422 NTDPNSGGYFAYVRRVLSYANPFSYFGGGTANASSSVPERQTR-PNTEVRNNLGQVGTSF 481

Query: 483 QPLSTARFGANIH---------SIHTLKKDEDDERFKGRNSFWNGNSTEYGGDDG 492
           Q  S  R               +IHTL  +ED+  F   N+FWNGNST+YGG  G
Sbjct: 482 QDPSEGRSNVRNRRPTTSRIGSNIHTLNHNEDEAPFGDGNAFWNGNSTQYGGGSG 524

[Close]

BLAST of Cp4.1LG17g10040 vs. NCBI nr
Match: gi|778710172|ref|XP_011656529.1| (PREDICTED: UBX domain-containing protein 4 isoform X1 [Cucumis sativus])

HSP 1 Score: 592.0 bits (1525), Expect = 9.4e-166
Identity = 352/538 (65.43%), Postives = 396/538 (73.61%), Query Frame = 1


Query: 1   MEQSISSLAFKGSVPEAIIESKNQKKLFVVYISGDDAESSSLESSTWTSSRVAEAVSKYC 60
           MEQSISSLAFKGS+ EAI+ESKNQ+KLF+VYISGDDAESS LESSTWTSS+VAE+VSKYC
Sbjct: 1   MEQSISSLAFKGSIAEAIVESKNQRKLFLVYISGDDAESSRLESSTWTSSKVAESVSKYC 60

Query: 61  VLLHIPAGSSDAAQFSSIYPQKSVPCITAVGYNGIQLWQNEGFVGAEVLASSLEKAWLGL 120
           VLLHIPAGS DAAQFSSIYPQKSVPCITAVGYNGIQLW NEGF+GAEVLAS+LEKAWLGL
Sbjct: 61  VLLHIPAGSMDAAQFSSIYPQKSVPCITAVGYNGIQLWLNEGFIGAEVLASNLEKAWLGL 120

Query: 121 HIQETTASVLTAALASKKSEASTSRPSDSGSSSLAAVSHADHHIDSSETNLGVNSCVAEE 180
           HIQETTASVLTAALASKKSEASTSRPSD  SSSLA+VS +DHHI S ETNLGVNS + EE
Sbjct: 121 HIQETTASVLTAALASKKSEASTSRPSDLRSSSLASVSPSDHHIGSLETNLGVNSGIVEE 180

Query: 181 EKGTENSSKKRKEPEKRVKEEDIKSDVKESTVHHSVSV---GNNNESPDPSENNKGSLAD 240
           EKG          PEK VK+ED K+D+KES VHHS+SV    N+  SP+PS  +K SLA 
Sbjct: 181 EKG----------PEKLVKQEDSKADIKESNVHHSLSVEIQNNDESSPEPSGKDKSSLAH 240

Query: 241 PGGQKNCSSENTSTIVHDSPIIPNHIESCQSGASRPIPPETKEVAQQEKNKIVDENNAIE 300
           P  Q++CS ENTS IV+DS   PN IES QSGA +PI  E KE  ++ K +IVD+NNAIE
Sbjct: 241 PQDQQSCSPENTSKIVNDSYTTPNLIESSQSGAPQPISLEAKEDVRENK-EIVDDNNAIE 300

Query: 301 NGSAPKNYTSSDIHLNIRLLNGVNVQEKFSKTSTLRMVKDYVDNSQESTFGSYDLAVPYP 360
           N SA K+Y S+D+HLNIRLLNG+N+QEKFSKTSTLRM+KDYVDNSQ STFG YDLA+PYP
Sbjct: 301 NDSARKDYASNDVHLNIRLLNGINLQEKFSKTSTLRMIKDYVDNSQPSTFGPYDLAIPYP 360

Query: 361 RKVFTDQDLEKSLSYLGLSNRQSLIMVRHLGVTRDFRGASSSADQRNSAANGGSSDENGS 420
           RKVFTDQDL KSLS LGL NRQ+LIMVRH GV  D RGASSS+D+R  +ANG SSDEN  
Sbjct: 361 RKVFTDQDLGKSLSDLGLHNRQALIMVRHQGVRSDLRGASSSSDERKFSANGVSSDENSD 420

Query: 421 EFSEVERRHV------------------RQPNQGTATTSGNNTR-------GKQPLSTAR 480
            +    +R +                  R   QG A    NN+         K    TA 
Sbjct: 421 GYFAFVKRILSYVNPFSYLGVGASTASSRHETQGDARQYSNNSLEAEDHYVRKPNQGTAM 480

Query: 481 FGANIHSIHTL----------------KKDEDDERFKGRNSFWNGNSTEYGGDDGDSK 495
            G N                       K D+D+ERFK RNSFWNGNSTEYGGD+ DSK
Sbjct: 481 VGGNNTRGKQPSSSSRFGANIHSIHTLKHDDDEERFKSRNSFWNGNSTEYGGDN-DSK 526

[Close]

BLAST of Cp4.1LG17g10040 vs. NCBI nr
Match: gi|449446221|ref|XP_004140870.1| (PREDICTED: UBX domain-containing protein 4 isoform X2 [Cucumis sativus])

HSP 1 Score: 587.0 bits (1512), Expect = 3.0e-164
Identity = 352/538 (65.43%), Postives = 395/538 (73.42%), Query Frame = 1


Query: 1   MEQSISSLAFKGSVPEAIIESKNQKKLFVVYISGDDAESSSLESSTWTSSRVAEAVSKYC 60
           MEQSISSLAFKGS+ EAI+ESKNQ+KLF+VYISGDDAESS LESSTWTSS+VAE+VSKYC
Sbjct: 1   MEQSISSLAFKGSIAEAIVESKNQRKLFLVYISGDDAESSRLESSTWTSSKVAESVSKYC 60

Query: 61  VLLHIPAGSSDAAQFSSIYPQKSVPCITAVGYNGIQLWQNEGFVGAEVLASSLEKAWLGL 120
           VLLHIPAGS DAAQFSSIYPQKSVPCITAVGYNGIQLW NEGF+GAEVLAS+LEKAWLGL
Sbjct: 61  VLLHIPAGSMDAAQFSSIYPQKSVPCITAVGYNGIQLWLNEGFIGAEVLASNLEKAWLGL 120

Query: 121 HIQETTASVLTAALASKKSEASTSRPSDSGSSSLAAVSHADHHIDSSETNLGVNSCVAEE 180
           HIQETTASVLTAALASKKSEASTSRPSD  SSSLA+VS +DHHI S ETNLGVNS + EE
Sbjct: 121 HIQETTASVLTAALASKKSEASTSRPSDLRSSSLASVSPSDHHIGSLETNLGVNSGIVEE 180

Query: 181 EKGTENSSKKRKEPEKRVKEEDIKSDVKESTVHHSVSV---GNNNESPDPSENNKGSLAD 240
           EKG          PEK VK ED K+D+KES VHHS+SV    N+  SP+PS  +K SLA 
Sbjct: 181 EKG----------PEKLVK-EDSKADIKESNVHHSLSVEIQNNDESSPEPSGKDKSSLAH 240

Query: 241 PGGQKNCSSENTSTIVHDSPIIPNHIESCQSGASRPIPPETKEVAQQEKNKIVDENNAIE 300
           P  Q++CS ENTS IV+DS   PN IES QSGA +PI  E KE  ++ K +IVD+NNAIE
Sbjct: 241 PQDQQSCSPENTSKIVNDSYTTPNLIESSQSGAPQPISLEAKEDVRENK-EIVDDNNAIE 300

Query: 301 NGSAPKNYTSSDIHLNIRLLNGVNVQEKFSKTSTLRMVKDYVDNSQESTFGSYDLAVPYP 360
           N SA K+Y S+D+HLNIRLLNG+N+QEKFSKTSTLRM+KDYVDNSQ STFG YDLA+PYP
Sbjct: 301 NDSARKDYASNDVHLNIRLLNGINLQEKFSKTSTLRMIKDYVDNSQPSTFGPYDLAIPYP 360

Query: 361 RKVFTDQDLEKSLSYLGLSNRQSLIMVRHLGVTRDFRGASSSADQRNSAANGGSSDENGS 420
           RKVFTDQDL KSLS LGL NRQ+LIMVRH GV  D RGASSS+D+R  +ANG SSDEN  
Sbjct: 361 RKVFTDQDLGKSLSDLGLHNRQALIMVRHQGVRSDLRGASSSSDERKFSANGVSSDENSD 420

Query: 421 EFSEVERRHV------------------RQPNQGTATTSGNNTR-------GKQPLSTAR 480
            +    +R +                  R   QG A    NN+         K    TA 
Sbjct: 421 GYFAFVKRILSYVNPFSYLGVGASTASSRHETQGDARQYSNNSLEAEDHYVRKPNQGTAM 480

Query: 481 FGANIHSIHTL----------------KKDEDDERFKGRNSFWNGNSTEYGGDDGDSK 495
            G N                       K D+D+ERFK RNSFWNGNSTEYGGD+ DSK
Sbjct: 481 VGGNNTRGKQPSSSSRFGANIHSIHTLKHDDDEERFKSRNSFWNGNSTEYGGDN-DSK 525

[Close]

BLAST of Cp4.1LG17g10040 vs. NCBI nr
Match: gi|659089807|ref|XP_008445691.1| (PREDICTED: UBX domain-containing protein 4 [Cucumis melo])

HSP 1 Score: 566.2 bits (1458), Expect = 5.5e-158
Identity = 347/538 (64.50%), Postives = 398/538 (73.98%), Query Frame = 1


Query: 1   MEQSISSLAFKGSVPEAIIESKNQKKLFVVYISGDDAESSSLESSTWTSSRVAEAVSKYC 60
           MEQSISSLAFKGS+ EAI+ESKNQ+KLF+VYISGDDAESS LESSTWTSS+VAE+VSKYC
Sbjct: 1   MEQSISSLAFKGSIAEAIVESKNQRKLFLVYISGDDAESSRLESSTWTSSKVAESVSKYC 60

Query: 61  VLLHIPAGSSDAAQFSSIYPQKSVPCITAVGYNGIQLWQNEGFVGAEVLASSLEKAWLGL 120
           VLLHIPAGS DAAQFSSIYPQKSVPCITAVGYNGIQLW NEGF+ AEVLAS+LEKAWLGL
Sbjct: 61  VLLHIPAGSMDAAQFSSIYPQKSVPCITAVGYNGIQLWLNEGFISAEVLASNLEKAWLGL 120

Query: 121 HIQETTASVLTAALASKKSEASTSRPSDSGSSSLAAVSHADHHIDSSETNLGVNSCVAEE 180
           HIQETTASVLTAALASKKSEASTSR SD  SSSLA+VS +DHHI SSETNLGVNS + EE
Sbjct: 121 HIQETTASVLTAALASKKSEASTSRTSDLCSSSLASVSPSDHHIGSSETNLGVNSGIVEE 180

Query: 181 EKGTENSSKKRKEPEKRVKEEDIKSDVKESTVHHSVSV--GNNNE-SPDPSENNKGSLAD 240
           EKG          PEK VK EDIK+D+KES VHHS+SV   NN+E S +PSE +K SLA 
Sbjct: 181 EKG----------PEKLVK-EDIKADIKESNVHHSLSVEIQNNDELSLEPSEKDKSSLAH 240

Query: 241 PGGQKNCSSENTSTIVHDSPIIPNHIESCQSGASRPIPPETKEVAQQEKNKIVDENNAIE 300
           P  Q++CS +N S IV+DS I P  IES QS A +P+  E KE  ++ K +IVD+NNAIE
Sbjct: 241 PRDQESCSPKNASKIVNDSYITPKLIESSQSRAPQPMSLEAKEEVRENK-EIVDDNNAIE 300

Query: 301 NGSAPKNYTSSDIHLNIRLLNGVNVQEKFSKTSTLRMVKDYVDNSQESTFGSYDLAVPYP 360
           N SA K+YTS+D+HLNIRLLNG+N+QEKF KTSTLRM+KDYVDNSQ STFGSYDLA+PYP
Sbjct: 301 NDSAHKDYTSNDVHLNIRLLNGINLQEKFPKTSTLRMIKDYVDNSQPSTFGSYDLAIPYP 360

Query: 361 RKVFTDQDLEKSLSYLGLSNRQSLIMVRHLGVTRDFRGASSSADQRNSAANGGSSDENGS 420
           RKVFTDQDL KSLS LGL NRQ+LI VRH GV+ + RG SSS D+R  +A+G SSDEN  
Sbjct: 361 RKVFTDQDLGKSLSDLGLHNRQALITVRHRGVSTNLRGGSSS-DERKFSADGVSSDENSD 420

Query: 421 EFSEVERRHVRQPNQ-------GTATTSGNNTRG-----------------KQP-LSTAR 480
            +    +R +   N         +A +S + T+G                 +QP   TA 
Sbjct: 421 GYFAFVKRILSYVNPFSYLGVGASAASSRHETQGDARQYSNSALEAENYYVRQPNQGTAM 480

Query: 481 FGANIHSIHTL----------------KKDEDDERFKGRNSFWNGNSTEYGGDDGDSK 495
            G N                       K D+DDERF+ RNSFWNGNSTEYGGD+ DSK
Sbjct: 481 AGENNTRGKQPSSSSRFGANIHSIHTLKHDDDDERFRSRNSFWNGNSTEYGGDN-DSK 524

[Close]

BLAST of Cp4.1LG17g10040 vs. NCBI nr
Match: gi|778710182|ref|XP_011656531.1| (PREDICTED: UBX domain-containing protein 4 isoform X3 [Cucumis sativus])

HSP 1 Score: 565.8 bits (1457), Expect = 7.2e-158
Identity = 316/428 (73.83%), Postives = 355/428 (82.94%), Query Frame = 1


Query: 1   MEQSISSLAFKGSVPEAIIESKNQKKLFVVYISGDDAESSSLESSTWTSSRVAEAVSKYC 60
           MEQSISSLAFKGS+ EAI+ESKNQ+KLF+VYISGDDAESS LESSTWTSS+VAE+VSKYC
Sbjct: 1   MEQSISSLAFKGSIAEAIVESKNQRKLFLVYISGDDAESSRLESSTWTSSKVAESVSKYC 60

Query: 61  VLLHIPAGSSDAAQFSSIYPQKSVPCITAVGYNGIQLWQNEGFVGAEVLASSLEKAWLGL 120
           VLLHIPAGS DAAQFSSIYPQKSVPCITAVGYNGIQLW NEGF+GAEVLAS+LEKAWLGL
Sbjct: 61  VLLHIPAGSMDAAQFSSIYPQKSVPCITAVGYNGIQLWLNEGFIGAEVLASNLEKAWLGL 120

Query: 121 HIQETTASVLTAALASKKSEASTSRPSDSGSSSLAAVSHADHHIDSSETNLGVNSCVAEE 180
           HIQETTASVLTAALASKKSEASTSRPSD  SSSLA+VS +DHHI S ETNLGVNS + EE
Sbjct: 121 HIQETTASVLTAALASKKSEASTSRPSDLRSSSLASVSPSDHHIGSLETNLGVNSGIVEE 180

Query: 181 EKGTENSSKKRKEPEKRVKEEDIKSDVKESTVHHSVSV---GNNNESPDPSENNKGSLAD 240
           EKG          PEK VK+ED K+D+KES VHHS+SV    N+  SP+PS  +K SLA 
Sbjct: 181 EKG----------PEKLVKQEDSKADIKESNVHHSLSVEIQNNDESSPEPSGKDKSSLAH 240

Query: 241 PGGQKNCSSENTSTIVHDSPIIPNHIESCQSGASRPIPPETKEVAQQEKNKIVDENNAIE 300
           P  Q++CS ENTS IV+DS   PN IES QSGA +PI  E KE  ++ K +IVD+NNAIE
Sbjct: 241 PQDQQSCSPENTSKIVNDSYTTPNLIESSQSGAPQPISLEAKEDVRENK-EIVDDNNAIE 300

Query: 301 NGSAPKNYTSSDIHLNIRLLNGVNVQEKFSKTSTLRMVKDYVDNSQESTFGSYDLAVPYP 360
           N SA K+Y S+D+HLNIRLLNG+N+QEKFSKTSTLRM+KDYVDNSQ STFG YDLA+PYP
Sbjct: 301 NDSARKDYASNDVHLNIRLLNGINLQEKFSKTSTLRMIKDYVDNSQPSTFGPYDLAIPYP 360

Query: 361 RKVFTDQDLEKSLSYLGLSNRQSLIMVRHLGVTRDFRGASSSADQRNSAANGGSSDENGS 420
           RKVFTDQDL KSLS LGL NRQ+LIMVRH GV  D RGASSS+D+R  +ANG SSDEN  
Sbjct: 361 RKVFTDQDLGKSLSDLGLHNRQALIMVRHQGVRSDLRGASSSSDERKFSANGVSSDENSD 417

Query: 421 EFSEVERR 426
            +    +R
Sbjct: 421 GYFAFVKR 417

[Close]

BLAST of Cp4.1LG17g10040 vs. NCBI nr
Match: gi|694418995|ref|XP_009337470.1| (PREDICTED: UBX domain-containing protein 4-like [Pyrus x bretschneideri])

HSP 1 Score: 368.6 bits (945), Expect = 1.7e-98
Identity = 247/537 (46.00%), Postives = 320/537 (59.59%), Query Frame = 1


Query: 1   MEQSISSLAFKGSVPEAIIESKNQKKLFVVYISGDDAESSSLESSTWTSSRVAEAVSKYC 60
           MEQS++SL +KGS+PEAI E+K Q+KLFVVYISG + ESS LE+STWT   VA++V KYC
Sbjct: 1   MEQSLTSLTYKGSIPEAITEAKKQRKLFVVYISGKNDESSRLENSTWTDLNVADSVEKYC 60

Query: 61  VLLHIPAGSSDAAQFSSIYPQKSVPCITAVGYNGIQLWQNEGFVGAEVLASSLEKAWLGL 120
           +LLHIP  S+DAA FS+IYPQKSVPCITA+GYNG+QLWQNEGF+ AE LASSLEKAWLGL
Sbjct: 61  ILLHIPEESTDAANFSAIYPQKSVPCITAIGYNGVQLWQNEGFLSAEALASSLEKAWLGL 120

Query: 121 HIQETTASVLTAALASKKSEASTS------RPSDSGSSSLAAVSHADHHIDSSETNLGVN 180
           HIQETTA+VL+AALAS KSE STS         +  SSS A +S      + S ++  V 
Sbjct: 121 HIQETTATVLSAALASNKSEPSTSGVPNAVSTGEESSSSKAVISD-----EGSSSSTAVE 180

Query: 181 SCVAEEEKGTENSSKKRKEPEKRVKEEDIKSDVKESTVH----HSVSVGNNNESPDPSEN 240
           S + +    + ++     +   + K  D K +   ST      H V++ + N+S      
Sbjct: 181 SPLIDTNVQSPDAIDAASDTVMKNKGRDCKIESSSSTKSAQGVHDVAMEDLNKSG----- 240

Query: 241 NKGSLADPGGQKNCSSENTSTIVHDSPIIPNHIESCQSG-ASRPIPPETKEVAQQEKNKI 300
             G + +P  +   S    +T+ H          SC SG  S+ +     EV Q +K ++
Sbjct: 241 --GDIVNPVAEGGYSGPEKTTVNH----------SCVSGEGSQAVSNVKSEVVQVDKGEV 300

Query: 301 VDENNAIENGSAPKNYTSSDIHLNIRLLNGVNVQEKFSKTSTLRMVKDYVDNSQESTFGS 360
            D+       +  +   SSD+HLNIRL NGV+++EKFS TST+RMVK+YVD +Q S  G+
Sbjct: 301 EDDKKVETFENCTRVSRSSDVHLNIRLPNGVSLKEKFSITSTMRMVKNYVDENQGSGIGN 360

Query: 361 YDLAVPYPRKVFTDQDLEKSLSYLGLSNRQSLIMVRHLGVTRDFRGASSSADQRNSAANG 420
           YDLA+PYPRK+F DQDL KSLS LGL +RQ+LI+V     T    G S+ +DQ +S    
Sbjct: 361 YDLAIPYPRKIFCDQDLSKSLSDLGLFDRQALIVVPRQKGTGYLSGTSAFSDQTDSRNTV 420

Query: 421 GSSD-ENGSEFSEVER-----------------------------RHVRQPNQGTATTSG 480
            SSD  NG  FS V+R                              +   P +  + T  
Sbjct: 421 SSSDGSNGGYFSYVKRLLSYFNPLSYLGSGASSSSSGQQSENGTWEYSPNPTRRNSVTQN 480

Query: 481 NNTRGKQPLSTAR------FGANIHSIHTLKKDEDDERFKGRNSFWNGNSTEYGGDD 491
            +T GK     +R      FG+N   IHTLK+DEDDERF  RNSFWNGNSTEYGG+D
Sbjct: 481 ASTSGKSEEKKSRKPPASGFGSN---IHTLKRDEDDERFXDRNSFWNGNSTEYGGND 512

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g10040 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PUX11_ARATH	3.2e-73	41.12	Plant UBX domain-containing protein 11 OS=Arabidopsis thaliana GN=PUX11 PE=1 SV=...	[more]
UBXN4_HUMAN	5.4e-12	22.28	UBX domain-containing protein 4 OS=Homo sapiens GN=UBXN4 PE=1 SV=2	[more]
UBXN4_PONAB	7.0e-12	22.28	UBX domain-containing protein 4 OS=Pongo abelii GN=UBXN4 PE=2 SV=1	[more]
UBXN4_RAT	1.9e-09	23.83	UBX domain-containing protein 4 OS=Rattus norvegicus GN=Ubxn4 PE=1 SV=1	[more]
UBXN4_MOUSE	1.6e-08	23.10	UBX domain-containing protein 4 OS=Mus musculus GN=Ubxn4 PE=1 SV=1	[more]

BLAST of Cp4.1LG17g10040 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KC97_CUCSA	6.5e-166	65.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G041180 PE=4 SV=1	[more]
B9HHD9_POPTR	2.4e-96	46.23	UBX domain-containing family protein OS=Populus trichocarpa GN=POPTR_0007s02410g...	[more]
A0A061EJB9_THECC	8.1e-92	45.39	Ubiquitin-like superfamily protein, putative isoform 3 OS=Theobroma cacao GN=TCM...	[more]
M5XDI9_PRUPE	3.1e-91	43.78	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003931mg PE=4 SV=1	[more]
A0A061ERL5_THECC	3.8e-89	44.95	Ubiquitin-like superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM...	[more]

BLAST of Cp4.1LG17g10040 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43210.1	1.8e-74	41.12	Ubiquitin-like superfamily protein	[more]

BLAST of Cp4.1LG17g10040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778710172\|ref\|XP_011656529.1\|	9.4e-166	65.43	PREDICTED: UBX domain-containing protein 4 isoform X1 [Cucumis sativus]	[more]
gi\|449446221\|ref\|XP_004140870.1\|	3.0e-164	65.43	PREDICTED: UBX domain-containing protein 4 isoform X2 [Cucumis sativus]	[more]
gi\|659089807\|ref\|XP_008445691.1\|	5.5e-158	64.50	PREDICTED: UBX domain-containing protein 4 [Cucumis melo]	[more]
gi\|778710182\|ref\|XP_011656531.1\|	7.2e-158	73.83	PREDICTED: UBX domain-containing protein 4 isoform X3 [Cucumis sativus]	[more]
gi\|694418995\|ref\|XP_009337470.1\|	1.7e-98	46.00	PREDICTED: UBX domain-containing protein 4-like [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR012336	Thioredoxin-like_fold
IPR001012	UBX_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g10040.1	Cp4.1LG17g10040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001012	UBX domain	PFAM	PF00789	UBX	coord: 307..384 score: 1.4
IPR001012	UBX domain	SMART	SM00166	ubx_3	coord: 302..385 score: 5.
IPR001012	UBX domain	PROFILE	PS50033	UBX	coord: 305..383 score: 16
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 8..116 score: 4.03
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 306..383 score: 3.7
None	No IPR available	PANTHER	PTHR13020	UBIQUITIN-ASSOCIATED UBA/UBX DOMAIN-CONTAINING	coord: 1..153 score: 1.6
None	No IPR available	PANTHER	PTHR13020:SF36	EXPRESSED PROTEIN	coord: 1..153 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG17g10040	Cucsa.365140	Cucumber (Gy14) v1	cgycpeB0956
Cp4.1LG17g10040	CmaCh08G000840	Cucurbita maxima (Rimu)	cmacpeB914
Cp4.1LG17g10040	CmoCh08G000880	Cucurbita moschata (Rifu)	cmocpeB851
Cp4.1LG17g10040	Cla007209	Watermelon (97103) v1	cpewmB323
Cp4.1LG17g10040	Csa6G041180	Cucumber (Chinese Long) v2	cpecuB332
Cp4.1LG17g10040	MELO3C011621	Melon (DHL92) v3.5.1	cpemeB303
Cp4.1LG17g10040	ClCG08G004240	Watermelon (Charleston Gray)	cpewcgB311
Cp4.1LG17g10040	CSPI06G03440	Wild cucumber (PI 183967)	cpecpiB333
Cp4.1LG17g10040	Lsi08G003470	Bottle gourd (USVL1VR-Ls)	cpelsiB278
Cp4.1LG17g10040	MELO3C011621.2	Melon (DHL92) v3.6.1	cpemedB354
Cp4.1LG17g10040	CsaV3_6G003720	Cucumber (Chinese Long) v3	cpecucB0412
Cp4.1LG17g10040	Bhi04G001644	Wax gourd	cpewgoB0409
Cp4.1LG17g10040	CsGy6G003420	Cucumber (Gy14) v2	cgybcpeB793
Cp4.1LG17g10040	Carg04912	Silver-seed gourd	carcpeB0125

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG17g10040	Cucurbita pepo (Zucchini)	cpecpeB165
Cp4.1LG17g10040	Cucurbita pepo (Zucchini)	cpecpeB172
Cp4.1LG17g10040	Cucurbita maxima (Rimu)	cmacpeB390
Cp4.1LG17g10040	Cucurbita moschata (Rifu)	cmocpeB354
Cp4.1LG17g10040	Cucumber (Chinese Long) v2	cpecuB331
Cp4.1LG17g10040	Melon (DHL92) v3.5.1	cpemeB287
Cp4.1LG17g10040	Cucumber (Gy14) v2	cgybcpeB928
Cp4.1LG17g10040	Silver-seed gourd	carcpeB0312
Cp4.1LG17g10040	Cucumber (Chinese Long) v3	cpecucB0419