Cp4.1LG17g09720 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG17g09720
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionS-(hydroxymethyl)glutathione dehydrogenase
LocationCp4.1LG17 : 7371438 .. 7372029 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTGTTGACTATAGTTTTGAGTGCATAGGGAATGTCAATGTGATGAGATCTGCTCTGGAGTGCTGCCACAAGGCGAGTGGCATAACAAATTTGAATGACTTGATATATCAATTGAAGTAGCTAACATAAGATTGTGAACGTGCATGCATCTTCTTACCAGGGCTGGGGGCAATCGGTCATTGTGGGGGTCGCAGCATCTGGCCAGGAAATATCCACGAGGCCTTTCCAGTTAGTGACTGGTCGTGTCTGGAAAGGAACAGCTTTTGGTGGTTTCAAAAGTCGTTCTCAAGTGCCTTGGCTTGTTGAGAAGTACTTGAAGAAGGTATCTTCAGCTTTTATTTTGTTTTTGTTCATCTTTTAGAAAAATAAGTTGACAATTGTACTTGTTTATTAATTGCACCTTCTGAAAACGTCTGCAAGATTTTGAAACCATAGCAACAAACACTTCTACTTTTCAAAGGTTTAAGATGCTTATTACTATCTCATCCATGCTGCAGGAAATCAAAGTCGACGAATACATAACCCACGAGTTGACCCTGGAGGAGATCAACAAAGCCTTTGATCTGATGCACGGAGGCGATTGCCTG

mRNA sequence

ATGGCGATTGTGAACGTGCATGCATCTTCTTACCAGGGCTGGGGGCAATCGGTCATTGTGGGGGTCGCAGCATCTGGCCAGGAAATATCCACGAGGCCTTTCCAGTTAGTGACTGGTCGTGTCTGGAAAGGAACAGCTTTTGGTGGTTTCAAAAGTCGTTCTCAAGTGCCTTGGCTTGTTGAGAAGTACTTGAAGAAGATGCTTATTACTATCTCATCCATGCTGCAGGAAATCAAAGTCGACGAATACATAACCCACGAGTTGACCCTGGAGGAGATCAACAAAGCCTTTGATCTGATGCACGGAGGCGATTGCCTG

Coding sequence (CDS)

ATGGCGATTGTGAACGTGCATGCATCTTCTTACCAGGGCTGGGGGCAATCGGTCATTGTGGGGGTCGCAGCATCTGGCCAGGAAATATCCACGAGGCCTTTCCAGTTAGTGACTGGTCGTGTCTGGAAAGGAACAGCTTTTGGTGGTTTCAAAAGTCGTTCTCAAGTGCCTTGGCTTGTTGAGAAGTACTTGAAGAAGATGCTTATTACTATCTCATCCATGCTGCAGGAAATCAAAGTCGACGAATACATAACCCACGAGTTGACCCTGGAGGAGATCAACAAAGCCTTTGATCTGATGCACGGAGGCGATTGCCTG

Protein sequence

MAIVNVHASSYQGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKMLITISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL
Homology
[Close]
BLAST of Cp4.1LG17g09720 vs. Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.0e-37
Identity = 78/96 (81.25%), Postives = 81/96 (84.38%), Query Frame = 1 

Query: 11  YQGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKMLIT 70
           ++GWG SVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKK    
Sbjct: 285 HKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKK---- 344

Query: 71  ISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL 107
                 EIKVDEYITH LTL EINKAFDL+H G CL
Sbjct: 345 ------EIKVDEYITHNLTLLEINKAFDLLHEGQCL 370

[Close]
BLAST of Cp4.1LG17g09720 vs. Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 151.8 bits (382), Expect = 4.3e-36
Identity = 75/96 (78.12%), Postives = 80/96 (83.33%), Query Frame = 1 

Query: 11  YQGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKMLIT 70
           ++GWG SVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR+QVPWLVEKY+ K    
Sbjct: 286 HKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNK---- 345

Query: 71  ISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL 107
                 EIKVDEYITH LTL EINKAFDL+H G CL
Sbjct: 346 ------EIKVDEYITHNLTLGEINKAFDLLHEGTCL 371

[Close]
BLAST of Cp4.1LG17g09720 vs. Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.6e-35
Identity = 73/96 (76.04%), Postives = 79/96 (82.29%), Query Frame = 1 

Query: 11  YQGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKMLIT 70
           ++GWG SVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYL K    
Sbjct: 288 HKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNK---- 347

Query: 71  ISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL 107
                 EIKVDEY+TH + L +INKAFDL+H G CL
Sbjct: 348 ------EIKVDEYVTHSMNLTDINKAFDLLHEGGCL 373

[Close]
BLAST of Cp4.1LG17g09720 vs. Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.6e-35
Identity = 73/96 (76.04%), Postives = 79/96 (82.29%), Query Frame = 1 

Query: 11  YQGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKMLIT 70
           ++GWG SVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYL K    
Sbjct: 288 HKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNK---- 347

Query: 71  ISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL 107
                 EIKVDEY+TH + L +INKAFDL+H G CL
Sbjct: 348 ------EIKVDEYVTHSMNLTDINKAFDLLHEGGCL 373

[Close]
BLAST of Cp4.1LG17g09720 vs. Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-33
Identity = 71/97 (73.20%), Postives = 78/97 (80.41%), Query Frame = 1 

Query: 10  SYQGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKMLI 69
           S +GWG SVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR+QVPWLV+KY+KK   
Sbjct: 287 SDKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVDKYMKK--- 346

Query: 70  TISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL 107
                  EIKVDEYITH + L +IN AF L+H G CL
Sbjct: 347 -------EIKVDEYITHNMNLADINDAFHLLHEGGCL 373

[Close]
BLAST of Cp4.1LG17g09720 vs. TrEMBL
Match: A0A0A0KBZ1_CUCSA (S-(hydroxymethyl)glutathione dehydrogenase OS=Cucumis sativus GN=Csa_6G087920 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 8.5e-39
Identity = 87/107 (81.31%), Postives = 90/107 (84.11%), Query Frame = 1 

Query: 4   VNVHASS----YQGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWL 63
           VNV  S+    ++GWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWL
Sbjct: 275 VNVMRSALECCHKGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWL 334

Query: 64  VEKYLKKMLITISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL 107
           VEKYLKK          EIKVDEYITH LTLEEINKAFDLMHGGDCL
Sbjct: 335 VEKYLKK----------EIKVDEYITHNLTLEEINKAFDLMHGGDCL 371

[Close]
BLAST of Cp4.1LG17g09720 vs. TrEMBL
Match: A0A068U5I2_COFCA (S-(hydroxymethyl)glutathione dehydrogenase OS=Coffea canephora GN=GSCOC_T00016296001 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 6.7e-36
Identity = 78/96 (81.25%), Postives = 82/96 (85.42%), Query Frame = 1 

Query: 11  YQGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKMLIT 70
           ++GWG SVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLV+KY+KK    
Sbjct: 286 HKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK---- 345

Query: 71  ISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL 107
                 EIKVDEYITH LTLEEINKAFDLMH G CL
Sbjct: 346 ------EIKVDEYITHNLTLEEINKAFDLMHDGGCL 371

[Close]
BLAST of Cp4.1LG17g09720 vs. TrEMBL
Match: B9T5W1_RICCO (S-(hydroxymethyl)glutathione dehydrogenase OS=Ricinus communis GN=RCOM_0996200 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 8.8e-36
Identity = 78/96 (81.25%), Postives = 82/96 (85.42%), Query Frame = 1 

Query: 11  YQGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKMLIT 70
           ++GWG SVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLV+KY+KK    
Sbjct: 286 HKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK---- 345

Query: 71  ISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL 107
                 EIKVDEYITH LTL EINKAFDLMH GDCL
Sbjct: 346 ------EIKVDEYITHNLTLVEINKAFDLMHEGDCL 371

[Close]
BLAST of Cp4.1LG17g09720 vs. TrEMBL
Match: M5VJ61_PRUPE (S-(hydroxymethyl)glutathione dehydrogenase OS=Prunus persica GN=PRUPE_ppa006317mg PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.1e-35
Identity = 79/96 (82.29%), Postives = 82/96 (85.42%), Query Frame = 1 

Query: 11  YQGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKMLIT 70
           ++GWG SVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKK    
Sbjct: 324 HKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKK---- 383

Query: 71  ISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL 107
                 EIKVDEYITH+LTL EINKAFDLMH G CL
Sbjct: 384 ------EIKVDEYITHKLTLGEINKAFDLMHEGGCL 409

[Close]
BLAST of Cp4.1LG17g09720 vs. TrEMBL
Match: A0A0K9PMC0_ZOSMR (S-(hydroxymethyl)glutathione dehydrogenase OS=Zostera marina GN=ZOSMA_215G00160 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.0e-35
Identity = 77/96 (80.21%), Postives = 81/96 (84.38%), Query Frame = 1 

Query: 11  YQGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKMLIT 70
           ++GWG SVIVGVAASGQEISTRPFQLVTGRVW+GTAFG FKSRSQVPWLVEKY+KK    
Sbjct: 286 HKGWGTSVIVGVAASGQEISTRPFQLVTGRVWRGTAFGDFKSRSQVPWLVEKYMKK---- 345

Query: 71  ISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL 107
                 EIKVDEYITH L L EINKAFDLMHGGDCL
Sbjct: 346 ------EIKVDEYITHNLNLAEINKAFDLMHGGDCL 371

[Close]
BLAST of Cp4.1LG17g09720 vs. TAIR10
Match: AT5G43940.2 (AT5G43940.2 GroES-like zinc-binding dehydrogenase family protein)

HSP 1 Score: 151.8 bits (382), Expect = 2.4e-37
Identity = 75/96 (78.12%), Postives = 80/96 (83.33%), Query Frame = 1 

Query: 11  YQGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKMLIT 70
           ++GWG SVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR+QVPWLVEKY+ K    
Sbjct: 298 HKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNK---- 357

Query: 71  ISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL 107
                 EIKVDEYITH LTL EINKAFDL+H G CL
Sbjct: 358 ------EIKVDEYITHNLTLGEINKAFDLLHEGTCL 383

[Close]
BLAST of Cp4.1LG17g09720 vs. TAIR10
Match: AT5G24760.1 (AT5G24760.1 GroES-like zinc-binding dehydrogenase family protein)

HSP 1 Score: 82.8 bits (203), Expect = 1.4e-16
Identity = 42/98 (42.86%), Postives = 59/98 (60.20%), Query Frame = 1 

Query: 9   SSYQGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKML 68
           S   GWG +V +GV  +  E+S      ++G+  KGT FGG+K +S +P L++KY+ K  
Sbjct: 286 SCSDGWGMTVTLGVPKAKPEVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNK-- 345

Query: 69  ITISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL 107
                   EI +DE+ITH L+ +EINKAF LM  G CL
Sbjct: 346 --------EIMIDEFITHNLSFDEINKAFVLMREGKCL 373

[Close]
BLAST of Cp4.1LG17g09720 vs. TAIR10
Match: AT1G77120.1 (AT1G77120.1 alcohol dehydrogenase 1)

HSP 1 Score: 76.3 bits (186), Expect = 1.3e-14
Identity = 36/105 (34.29%), Postives = 58/105 (55.24%), Query Frame = 1 

Query: 2   AIVNVHASSYQGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVE 61
           A++      + GWG +V+VGV +      T P   +  R  KGT FG +K ++ +P +VE
Sbjct: 277 AMIQAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFFGNYKPKTDIPGVVE 336

Query: 62  KYLKKMLITISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL 107
           KY+ K          E++++++ITH +   EINKAFD M  G+ +
Sbjct: 337 KYMNK----------ELELEKFITHTVPFSEINKAFDYMLKGESI 371

[Close]
BLAST of Cp4.1LG17g09720 vs. TAIR10
Match: AT1G22430.1 (AT1G22430.1 GroES-like zinc-binding dehydrogenase family protein)

HSP 1 Score: 73.6 bits (179), Expect = 8.5e-14
Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 1 

Query: 9   SSYQGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKML 68
           S+  G G++V++G+      IS   F L+ GRV  G+ FGG KS+  +P LV+ YLKK  
Sbjct: 293 STRTGTGKTVMLGMEKHAAPISLGSFDLLRGRVICGSLFGGLKSKLDIPILVDHYLKK-- 352

Query: 69  ITISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL 107
                   E+ +D +ITHEL  +EINKAF L+  G  L
Sbjct: 353 --------ELNLDSFITHELNFKEINKAFALLEEGKSL 380

[Close]
BLAST of Cp4.1LG17g09720 vs. TAIR10
Match: AT5G42250.1 (AT5G42250.1 Zinc-binding alcohol dehydrogenase family protein)

HSP 1 Score: 72.4 bits (176), Expect = 1.9e-13
Identity = 34/105 (32.38%), Postives = 62/105 (59.05%), Query Frame = 1 

Query: 3   IVNVHASSYQGWGQSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVE 62
           +   +A   QGWG+++ +GV   G +I    F ++  G++  G+ FGG K+++ +P L++
Sbjct: 289 VQEAYACCRQGWGKTITLGVDKPGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPILLK 348

Query: 63  KYLKKMLITISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL 107
           +YL            E+++D+++THE+  EEIN AF L+  G C+
Sbjct: 349 RYLS----------NELELDKFVTHEMKFEEINDAFQLLLEGKCI 383

[Close]
BLAST of Cp4.1LG17g09720 vs. NCBI nr
Match: gi|449445644|ref|XP_004140582.1| (PREDICTED: alcohol dehydrogenase class-3 [Cucumis sativus])

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-38
Identity = 87/107 (81.31%), Postives = 90/107 (84.11%), Query Frame = 1 

Query: 4   VNVHASS----YQGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWL 63
           VNV  S+    ++GWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWL
Sbjct: 275 VNVMRSALECCHKGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWL 334

Query: 64  VEKYLKKMLITISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL 107
           VEKYLKK          EIKVDEYITH LTLEEINKAFDLMHGGDCL
Sbjct: 335 VEKYLKK----------EIKVDEYITHNLTLEEINKAFDLMHGGDCL 371

[Close]
BLAST of Cp4.1LG17g09720 vs. NCBI nr
Match: gi|659120043|ref|XP_008459982.1| (PREDICTED: alcohol dehydrogenase class-3 [Cucumis melo])

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-38
Identity = 87/107 (81.31%), Postives = 90/107 (84.11%), Query Frame = 1 

Query: 4   VNVHASS----YQGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWL 63
           VNV  S+    ++GWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWL
Sbjct: 275 VNVMRSALECCHKGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWL 334

Query: 64  VEKYLKKMLITISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL 107
           VEKYLKK          EIKVDEYITH LTLEEINKAFDLMHGGDCL
Sbjct: 335 VEKYLKK----------EIKVDEYITHNLTLEEINKAFDLMHGGDCL 371

[Close]
BLAST of Cp4.1LG17g09720 vs. NCBI nr
Match: gi|729414890|ref|XP_010556868.1| (PREDICTED: alcohol dehydrogenase class-3 [Tarenaya hassleriana])

HSP 1 Score: 160.2 bits (404), Expect = 1.9e-36
Identity = 79/96 (82.29%), Postives = 83/96 (86.46%), Query Frame = 1 

Query: 11  YQGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKMLIT 70
           ++GWG SVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLV+KY+KK    
Sbjct: 286 HKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK---- 345

Query: 71  ISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL 107
                 EIKVDEYITH LTLEEINKAFDLMH GDCL
Sbjct: 346 ------EIKVDEYITHNLTLEEINKAFDLMHEGDCL 371

[Close]
BLAST of Cp4.1LG17g09720 vs. NCBI nr
Match: gi|661892652|emb|CDP03810.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 157.9 bits (398), Expect = 9.7e-36
Identity = 78/96 (81.25%), Postives = 82/96 (85.42%), Query Frame = 1 

Query: 11  YQGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKMLIT 70
           ++GWG SVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLV+KY+KK    
Sbjct: 286 HKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK---- 345

Query: 71  ISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL 107
                 EIKVDEYITH LTLEEINKAFDLMH G CL
Sbjct: 346 ------EIKVDEYITHNLTLEEINKAFDLMHDGGCL 371

[Close]
BLAST of Cp4.1LG17g09720 vs. NCBI nr
Match: gi|255585914|ref|XP_002533630.1| (PREDICTED: alcohol dehydrogenase class-3 [Ricinus communis])

HSP 1 Score: 157.5 bits (397), Expect = 1.3e-35
Identity = 78/96 (81.25%), Postives = 82/96 (85.42%), Query Frame = 1 

Query: 11  YQGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKMLIT 70
           ++GWG SVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLV+KY+KK    
Sbjct: 286 HKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK---- 345

Query: 71  ISSMLQEIKVDEYITHELTLEEINKAFDLMHGGDCL 107
                 EIKVDEYITH LTL EINKAFDLMH GDCL
Sbjct: 346 ------EIKVDEYITHNLTLVEINKAFDLMHEGDCL 371

The following BLAST results are available for this feature:
BLAST of Cp4.1LG17g09720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ADHX_PEA3.0e-3781.25Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1[more]
ADHX_ARATH4.3e-3678.13Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2[more]
ADHX_ORYSJ1.6e-3576.04Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE... [more]
ADHX_ORYSI1.6e-3576.04Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1[more]
ADHX_MAIZE1.2e-3373.20Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1[more]
BLAST of Cp4.1LG17g09720 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBZ1_CUCSA8.5e-3981.31S-(hydroxymethyl)glutathione dehydrogenase OS=Cucumis sativus GN=Csa_6G087920 PE... [more]
A0A068U5I2_COFCA6.7e-3681.25S-(hydroxymethyl)glutathione dehydrogenase OS=Coffea canephora GN=GSCOC_T0001629... [more]
B9T5W1_RICCO8.8e-3681.25S-(hydroxymethyl)glutathione dehydrogenase OS=Ricinus communis GN=RCOM_0996200 P... [more]
M5VJ61_PRUPE1.1e-3582.29S-(hydroxymethyl)glutathione dehydrogenase OS=Prunus persica GN=PRUPE_ppa006317m... [more]
A0A0K9PMC0_ZOSMR2.0e-3580.21S-(hydroxymethyl)glutathione dehydrogenase OS=Zostera marina GN=ZOSMA_215G00160 ... [more]
BLAST of Cp4.1LG17g09720 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G43940.22.4e-3778.13 GroES-like zinc-binding dehydrogenase family protein[more]
AT5G24760.11.4e-1642.86 GroES-like zinc-binding dehydrogenase family protein[more]
AT1G77120.11.3e-1434.29 alcohol dehydrogenase 1[more]
AT1G22430.18.5e-1441.84 GroES-like zinc-binding dehydrogenase family protein[more]
AT5G42250.11.9e-1332.38 Zinc-binding alcohol dehydrogenase family protein[more]
BLAST of Cp4.1LG17g09720 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445644|ref|XP_004140582.1|1.2e-3881.31PREDICTED: alcohol dehydrogenase class-3 [Cucumis sativus][more]
gi|659120043|ref|XP_008459982.1|1.2e-3881.31PREDICTED: alcohol dehydrogenase class-3 [Cucumis melo][more]
gi|729414890|ref|XP_010556868.1|1.9e-3682.29PREDICTED: alcohol dehydrogenase class-3 [Tarenaya hassleriana][more]
gi|661892652|emb|CDP03810.1|9.7e-3681.25unnamed protein product [Coffea canephora][more]
gi|255585914|ref|XP_002533630.1|1.3e-3581.25PREDICTED: alcohol dehydrogenase class-3 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011032GroES-like_sf
IPR002085Alcohol dehydrogenase superfamily, zinc-type
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006069 ethanol oxidation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005575 cellular_component
molecular_function GO:0004022 alcohol dehydrogenase (NAD) activity
molecular_function GO:0051903 S-(hydroxymethyl)glutathione dehydrogenase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g09720.1Cp4.1LG17g09720.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002085Alcohol dehydrogenase superfamily, zinc-typePANTHERPTHR11695ALCOHOL DEHYDROGENASE RELATEDcoord: 12..106
score: 4.5
IPR011032GroES-likeunknownSSF50129GroES-likecoord: 53..106
score: 4.5
NoneNo IPR availablePANTHERPTHR11695:SF401ALCOHOL DEHYDROGENASE 5coord: 12..106
score: 4.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG17g09720MELO3C022399.2Melon (DHL92) v3.6.1cpemedB332
Cp4.1LG17g09720CsaV3_6G007280Cucumber (Chinese Long) v3cpecucB0403
Cp4.1LG17g09720Bhi12G002076Wax gourdcpewgoB0389
Cp4.1LG17g09720CsGy6G006940Cucumber (Gy14) v2cgybcpeB783
Cp4.1LG17g09720Carg11533Silver-seed gourdcarcpeB0022
Cp4.1LG17g09720Carg04884Silver-seed gourdcarcpeB0125
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG17g09720Cp4.1LG12g10220Cucurbita pepo (Zucchini)cpecpeB170
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG17g09720Cucurbita pepo (Zucchini)cpecpeB258
Cp4.1LG17g09720Cucumber (Gy14) v1cgycpeB0911
Cp4.1LG17g09720Cucurbita maxima (Rimu)cmacpeB389
Cp4.1LG17g09720Cucurbita maxima (Rimu)cmacpeB529
Cp4.1LG17g09720Cucurbita maxima (Rimu)cmacpeB914
Cp4.1LG17g09720Cucurbita moschata (Rifu)cmocpeB352
Cp4.1LG17g09720Cucurbita moschata (Rifu)cmocpeB851
Cp4.1LG17g09720Wild cucumber (PI 183967)cpecpiB323
Cp4.1LG17g09720Cucumber (Chinese Long) v2cpecuB322
Cp4.1LG17g09720Bottle gourd (USVL1VR-Ls)cpelsiB249
Cp4.1LG17g09720Bottle gourd (USVL1VR-Ls)cpelsiB270
Cp4.1LG17g09720Watermelon (Charleston Gray)cpewcgB298
Cp4.1LG17g09720Watermelon (Charleston Gray)cpewcgB307
Cp4.1LG17g09720Watermelon (97103) v1cpewmB341
Cp4.1LG17g09720Melon (DHL92) v3.5.1cpemeB284
Cp4.1LG17g09720Cucumber (Gy14) v2cgybcpeB353
Cp4.1LG17g09720Melon (DHL92) v3.6.1cpemedB352
Cp4.1LG17g09720Silver-seed gourdcarcpeB1097
Cp4.1LG17g09720Wax gourdcpewgoB0406