Cp4.1LG17g09240 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGGCAATAACCTGTTAGTTTGAGATGTGGTGGAGAGGGTCAAGTAATGAGGGCAAGGAAGGAGCGAGATGAGAGCCGAGAGAGGAGGCACACAACCAATATGTTAAAATCATTCTTCAACTATTCAAACAAATATTCTCTTCTTTTCTTTCTTCCTTCCTTCCTTCCTTAATTACCAAAAAATAACCTAATTAATTTTAATAATAATAAAGGGATTGCAAAATTCAAATGGAATGGGTTGTTTGGGTTTAAAAAATTAATAATAAAAGGAGAAAAGGATAAAGAAAATGGGAGATTGAGTGTTGTTTACGCCAAAACATGCGTCCACTTCCCCATTTCCTTTCTCTCTTCTCAGCGCACCCATTACTATAAAGAACCTTCACTTTCCTCATCTCCTTCCCACGCTTCTTCTTCTTCCTCTTCTTCCTCTTCTTCTTCTTGGGCGCCGATGGAGAAGCTTAATTTTGTCAAAAATGGCGTCCTTCGACTGCCCCCTGGCTTCCGCTTCCACCCCACGGATGAAGAGCTTGTGCTTCAATACTTGAACCGGAAGGTTCTTTCCTGCCCTTTACCGGCCTCAATCATCCCTGACGTCGACGTTTGCAAGGCTGATCCATGGGATTTGCCTGGTTAGTTTAAACCACTTCATTTCCCCCAATTTCTTAAACGCCTGTTTTCGGAATTTCGCCCAAATTGGGACTTGGGATTTTGTTTAGGTTTGTTTTATTGAATGGGAATTTGTTTTTTTTTTCTTTTTTTTCTTTTTTTCAGGGAACATGGAGCAAGAGAGGTATTTCTTCAGCACGAGAGAAGCTAAGTACCCACATGGGAACAGATCAAACAGAGCGGCGGCGTCGGGGTATTGGAAGGCCACCGGAATCGACAAACAAATTCTGGCTTCGAAGGCAAACCAAGTGGTGGGGTTGAAGAAAACTCTGGTTTTCTATAGAGGAAAGCCACCCCATGGGTCTAGAACCGATTGGATTATGCACGAGTACCGTCTCGCTTCTCCACCAATGGTTTGCTTTAATGCTTCACAGGGAAAAACCACCCTTCAGGTGATTTAAACTTCTGGGCTTTGTTCATTTGGATGAAAATGTTTAGGACATTGCTCAGATATCATGTTAAATTGCACTATATTGAGCTTAAAATGATGCTGATATGATGTTGAAGTACTAATGAGGTTAAAAAGTTATGGGTTATGGGGTATGATATGTTTAATAAAATAGAAAAGGTGCTTCATAGGCTGTGTTGGAAAGGGTATTATGTAATGAATGAAGTGTTGGTAATAATAGAAGTGGTGGATTTTGCAGAGTTGTGCGGCTCCAATGGAGAATTGGGTTCTGTGTCGCATATTTCTGAAGAAAAGAAATGGGCAACAAAGCGAAGAGGAGAAGGACGCAATAAGCAACAGAAAGTCAAGGAGGATTGGGAAGCCTGTGTTTTATGAGTTCATGAGAAAGGAAAGGGGTGAGACAGACTTGAATCTGGCTCCTTCTTCTTCATCTTCAGGCTCCAGTGGACTCACGGAGATTTCAAATAATGAATTGGATGATCATGAAGAAAGCAGCAGCAGCTGCAACACCTTCCCTTACTTCAGGAGAAAATCTTAAAGGACTCCATATCTTTTTATCTTCGCTTCAGACACCTTCCTTTGTCTGCTTTCCCATGTCAGAATAACAACCATGAAAGGAAGAAGAAGGTGTTGTAGCTTTGAGGTTTGTGGTCGGAAAATCATAAGCCAAAAAGAGACCAAACAAACTGAATCGGCGTTTAAGTTGTTGTTAGTTTACGCAGAGAAAGAAATGAAATCCAAATTTCGAAGTCATTTGGTAATTAAGTGTGTTACTTATTAGCCTACCAAATAATACTCTGCCTCTCTTGCTTAATAACTTTAAACTCTCCATTATTGAGCAACCCATGCAGTTGTGAGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNGGATGAAGAAGAAGAAGAAGACGAAGAAGAATGTGATCCGATTAGGAAGTTCCTTTCTCTTTGTAGGAAAGGCAAACAGAAATAAAAAGAATTGACTCTGACAATTAAAATAAATAATTACAACAGAACCAAATTCCTCAACTTTGGGTTTTTTATTTATTTGGTTGAAATCCGAAAGAGTCTCCAACAATTCTAAGCTGAGTATATATGCTGATTTTATAAATCTTCAAATCCATTTCAAAGCACTTTG GTGGCAATAACCTGTTAGTTTGAGATGTGGTGGAGAGGGTCAAGTAATGAGGGCAAGGAAGGAGCGAGATGAGAGCCGAGAGAGGAGGCACACAACCAATATGTTAAAATCATTCTTCAACTATTCAAACAAATATTCTCTTCTTTTCTTTCTTCCTTCCTTCCTTCCTTAATTACCAAAAAATAACCTAATTAATTTTAATAATAATAAAGGGATTGCAAAATTCAAATGGAATGGGTTGTTTGGGTTTAAAAAATTAATAATAAAAGGAGAAAAGGATAAAGAAAATGGGAGATTGAGTGTTGTTTACGCCAAAACATGCGTCCACTTCCCCATTTCCTTTCTCTCTTCTCAGCGCACCCATTACTATAAAGAACCTTCACTTTCCTCATCTCCTTCCCACGCTTCTTCTTCTTCCTCTTCTTCCTCTTCTTCTTCTTGGGCGCCGATGGAGAAGCTTAATTTTGTCAAAAATGGCGTCCTTCGACTGCCCCCTGGCTTCCGCTTCCACCCCACGGATGAAGAGCTTGTGCTTCAATACTTGAACCGGAAGGTTCTTTCCTGCCCTTTACCGGCCTCAATCATCCCTGACGTCGACGTTTGCAAGGCTGATCCATGGGATTTGCCTGGGAACATGGAGCAAGAGAGGTATTTCTTCAGCACGAGAGAAGCTAAGTACCCACATGGGAACAGATCAAACAGAGCGGCGGCGTCGGGGTATTGGAAGGCCACCGGAATCGACAAACAAATTCTGGCTTCGAAGGCAAACCAAGTGGTGGGGTTGAAGAAAACTCTGGTTTTCTATAGAGGAAAGCCACCCCATGGGTCTAGAACCGATTGGATTATGCACGAGTACCGTCTCGCTTCTCCACCAATGGTTTGCTTTAATGCTTCACAGGGAAAAACCACCCTTCAGAGTTGTGCGGCTCCAATGGAGAATTGGGTTCTGTGTCGCATATTTCTGAAGAAAAGAAATGGGCAACAAAGCGAAGAGGAGAAGGACGCAATAAGCAACAGAAAGTCAAGGAGGATTGGGAAGCCTGTGTTTTATGAGTTCATGAGAAAGGAAAGGGGTGAGACAGACTTGAATCTGGCTCCTTCTTCTTCATCTTCAGGCTCCAGTGGACTCACGGAGATTTCAAATAATGAATTGGATGATCATGAAGAAAGCAGCAGCAGCTGCAACACCTTCCCTTACTTCAGGAGAAAATCTTAAAGGACTCCATATCTTTTTATCTTCGCTTCAGACACCTTCCTTTGTCTGCTTTCCCATGTCAGAATAACAACCATGAAAGGAAGAAGAAGGTGTTGTAGCTTTGAGGTTTGTGGTCGGAAAATCATAAGCCAAAAAGAGACCAAACAAACTGAATCGGCGTTTAAGTTGTTGTTAGTTTACGCAGAGAAAGAAATGAAATCCAAATTTCGAAGTCATTTGGTAATTAAGTGTGTTACTTATTAGCCTACCAAATAATACTCTGCCTCTCTTGCTTAATAACTTTAAACTCTCCATTATTGAGCAACCCATGCAGTTGTGAGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNGGATGAAGAAGAAGAAGAAGACGAAGAAGAATGTGATCCGATTAGGAAGTTCCTTTCTCTTTGTAGGAAAGGCAAACAGAAATAAAAAGAATTGACTCTGACAATTAAAATAAATAATTACAACAGAACCAAATTCCTCAACTTTGGGTTTTTTATTTATTTGGTTGAAATCCGAAAGAGTCTCCAACAATTCTAAGCTGAGTATATATGCTGATTTTATAAATCTTCAAATCCATTTCAAAGCACTTTG ATGGAGAAGCTTAATTTTGTCAAAAATGGCGTCCTTCGACTGCCCCCTGGCTTCCGCTTCCACCCCACGGATGAAGAGCTTGTGCTTCAATACTTGAACCGGAAGGTTCTTTCCTGCCCTTTACCGGCCTCAATCATCCCTGACGTCGACGTTTGCAAGGCTGATCCATGGGATTTGCCTGGGAACATGGAGCAAGAGAGGTATTTCTTCAGCACGAGAGAAGCTAAGTACCCACATGGGAACAGATCAAACAGAGCGGCGGCGTCGGGGTATTGGAAGGCCACCGGAATCGACAAACAAATTCTGGCTTCGAAGGCAAACCAAGTGGTGGGGTTGAAGAAAACTCTGGTTTTCTATAGAGGAAAGCCACCCCATGGGTCTAGAACCGATTGGATTATGCACGAGTACCGTCTCGCTTCTCCACCAATGGTTTGCTTTAATGCTTCACAGGGAAAAACCACCCTTCAGAGTTGTGCGGCTCCAATGGAGAATTGGGTTCTGTGTCGCATATTTCTGAAGAAAAGAAATGGGCAACAAAGCGAAGAGGAGAAGGACGCAATAAGCAACAGAAAGTCAAGGAGGATTGGGAAGCCTGTGTTTTATGAGTTCATGAGAAAGGAAAGGGGTGAGACAGACTTGAATCTGGCTCCTTCTTCTTCATCTTCAGGCTCCAGTGGACTCACGGAGATTTCAAATAATGAATTGGATGATCATGAAGAAAGCAGCAGCAGCTGCAACACCTTCCCTTACTTCAGGAGAAAATCTTAA MEKLNFVKNGVLRLPPGFRFHPTDEELVLQYLNRKVLSCPLPASIIPDVDVCKADPWDLPGNMEQERYFFSTREAKYPHGNRSNRAAASGYWKATGIDKQILASKANQVVGLKKTLVFYRGKPPHGSRTDWIMHEYRLASPPMVCFNASQGKTTLQSCAAPMENWVLCRIFLKKRNGQQSEEEKDAISNRKSRRIGKPVFYEFMRKERGETDLNLAPSSSSSGSSGLTEISNNELDDHEESSSSCNTFPYFRRKS
BLAST of Cp4.1LG17g09240 vs. Swiss-Prot
Match: NAC83_ARATH (NAC domain-containing protein 83 OS=Arabidopsis thaliana GN=NAC083 PE=1 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 6.0e-84 Identity = 162/268 (60.45%), Postives = 193/268 (72.01%), Query Frame = 1
BLAST of Cp4.1LG17g09240 vs. Swiss-Prot
Match: NAC41_ARATH (NAC domain-containing protein 41 OS=Arabidopsis thaliana GN=NAC041 PE=2 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 1.7e-70 Identity = 150/283 (53.00%), Postives = 183/283 (64.66%), Query Frame = 1
BLAST of Cp4.1LG17g09240 vs. Swiss-Prot
Match: NAC56_ARATH (NAC transcription factor 56 OS=Arabidopsis thaliana GN=NAC056 PE=2 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 2.0e-50 Identity = 100/181 (55.25%), Postives = 118/181 (65.19%), Query Frame = 1
BLAST of Cp4.1LG17g09240 vs. Swiss-Prot
Match: NAC10_ORYSJ (NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 6.3e-49 Identity = 102/196 (52.04%), Postives = 127/196 (64.80%), Query Frame = 1
BLAST of Cp4.1LG17g09240 vs. Swiss-Prot
Match: NAC10_ORYSI (NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 8.2e-49 Identity = 102/196 (52.04%), Postives = 127/196 (64.80%), Query Frame = 1
BLAST of Cp4.1LG17g09240 vs. TrEMBL
Match: A0A0A0KAC9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G092010 PE=4 SV=1) HSP 1 Score: 451.8 bits (1161), Expect = 5.4e-124 Identity = 219/258 (84.88%), Postives = 235/258 (91.09%), Query Frame = 1
BLAST of Cp4.1LG17g09240 vs. TrEMBL
Match: A0A0M5JAB4_MANES (NAC transcription factors 35 OS=Manihot esculenta PE=2 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 6.7e-106 Identity = 188/256 (73.44%), Postives = 217/256 (84.77%), Query Frame = 1
BLAST of Cp4.1LG17g09240 vs. TrEMBL
Match: B9RFW3_RICCO (NAC domain-containing protein, putative OS=Ricinus communis GN=RCOM_1437600 PE=4 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 5.6e-105 Identity = 191/257 (74.32%), Postives = 217/257 (84.44%), Query Frame = 1
BLAST of Cp4.1LG17g09240 vs. TrEMBL
Match: A0A059SWR9_HEVBR (NAC transcription factor OS=Hevea brasiliensis GN=NAC2 PE=2 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 1.6e-104 Identity = 186/256 (72.66%), Postives = 216/256 (84.38%), Query Frame = 1
BLAST of Cp4.1LG17g09240 vs. TrEMBL
Match: A0A061E5W2_THECC (NAC domain protein, IPR003441 OS=Theobroma cacao GN=TCM_008477 PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 3.7e-104 Identity = 189/258 (73.26%), Postives = 214/258 (82.95%), Query Frame = 1
BLAST of Cp4.1LG17g09240 vs. TAIR10
Match: AT5G13180.1 (AT5G13180.1 NAC domain containing protein 83) HSP 1 Score: 312.0 bits (798), Expect = 3.4e-85 Identity = 162/268 (60.45%), Postives = 193/268 (72.01%), Query Frame = 1
BLAST of Cp4.1LG17g09240 vs. TAIR10
Match: AT2G33480.1 (AT2G33480.1 NAC domain containing protein 41) HSP 1 Score: 267.3 bits (682), Expect = 9.6e-72 Identity = 150/283 (53.00%), Postives = 183/283 (64.66%), Query Frame = 1
BLAST of Cp4.1LG17g09240 vs. TAIR10
Match: AT3G15510.1 (AT3G15510.1 NAC domain containing protein 2) HSP 1 Score: 200.7 bits (509), Expect = 1.1e-51 Identity = 100/181 (55.25%), Postives = 118/181 (65.19%), Query Frame = 1
BLAST of Cp4.1LG17g09240 vs. TAIR10
Match: AT1G52880.1 (AT1G52880.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein) HSP 1 Score: 188.7 bits (478), Expect = 4.3e-48 Identity = 97/174 (55.75%), Postives = 120/174 (68.97%), Query Frame = 1
BLAST of Cp4.1LG17g09240 vs. TAIR10
Match: AT3G04070.1 (AT3G04070.1 NAC domain containing protein 47) HSP 1 Score: 188.3 bits (477), Expect = 5.7e-48 Identity = 112/255 (43.92%), Postives = 147/255 (57.65%), Query Frame = 1
BLAST of Cp4.1LG17g09240 vs. NCBI nr
Match: gi|659119882|ref|XP_008459893.1| (PREDICTED: NAC domain-containing protein 18 [Cucumis melo]) HSP 1 Score: 461.8 bits (1187), Expect = 7.5e-127 Identity = 222/257 (86.38%), Postives = 237/257 (92.22%), Query Frame = 1
BLAST of Cp4.1LG17g09240 vs. NCBI nr
Match: gi|449445576|ref|XP_004140548.1| (PREDICTED: NAC domain-containing protein 18 [Cucumis sativus]) HSP 1 Score: 451.8 bits (1161), Expect = 7.8e-124 Identity = 219/258 (84.88%), Postives = 235/258 (91.09%), Query Frame = 1
BLAST of Cp4.1LG17g09240 vs. NCBI nr
Match: gi|925170191|gb|ALC79012.1| (NAC transcription factors 35 [Manihot esculenta]) HSP 1 Score: 391.7 bits (1005), Expect = 9.6e-106 Identity = 188/256 (73.44%), Postives = 217/256 (84.77%), Query Frame = 1
BLAST of Cp4.1LG17g09240 vs. NCBI nr
Match: gi|255543138|ref|XP_002512632.1| (PREDICTED: NAC domain-containing protein 83 [Ricinus communis]) HSP 1 Score: 388.7 bits (997), Expect = 8.1e-105 Identity = 191/257 (74.32%), Postives = 217/257 (84.44%), Query Frame = 1
BLAST of Cp4.1LG17g09240 vs. NCBI nr
Match: gi|571061262|gb|AHF27223.1| (NAC transcription factor [Hevea brasiliensis]) HSP 1 Score: 387.1 bits (993), Expect = 2.4e-104 Identity = 186/256 (72.66%), Postives = 216/256 (84.38%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |