Cp4.1LG17g08610 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG17g08610
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTubby protein, putative
LocationCp4.1LG17 : 5218633 .. 5222053 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGGTTATGAATCCAGAGATAGAGACTAGACCACAAAATACCTTCCCCCATTTTCTCATTCTCTTAACTCTTCCCCTGTTCTTGTCTCAACAGACAAAAGCATGAGTGGTGACAAGAAGACGATCATTCAACGCCAAACTTCCTATAATCCTCTCTATGTTAATCCCCTTACTGACCTCCGGCACAACCGTAGCTGTAGCGACGGCGGATTCCGGCAAGGTAAGGAAAACTTGACACCCAATACGAAGGAGAAACAGAGCGATGAAAATGGAGTTCTCTGCGACAAAGAAAACGCGATTCCGATTAATGGGTCTTGTGCTAATCCTAAGAAATTTGGGGATTTCAAGTCGTTTTCGACTGGGAAGGCGTTGAAGCCTTCGTCGCTTCATCTGTGTATGCAGATGAATGAACCAGATAAGGTTTTTGGGTCTAAGTTGTGGGAGGGGACTGATTCAGAGCATTCGAGTTCGTTGAAGATTTGGGACTTTTCGGATTCTGAAGCTGCTCCAGCTTCTTCTTGGTCCACATTGCCTAACAGGTGGGTTCTCTTATTAGTTCTCTGTTTTTGAGAACTAAATTAAGCTTACTATCTCACAACCTTGTTGAACAAGACATTGAATACTCATTTTGATTATCATTTCAACTACTACCTCACAGCTTCTTTTGAGGATGTTAAGGATGTGATTATGTTTTGTGTTTTGTTTTTTTTCAGGTCGTTGTTGTGTAGGCCATTGCCTGTGGATGTGGGGAGATGTACCTGTGTCATTGTGAAGGAGAAGTCACCGGATGGGCTTCGTGGTGGTGCTTTCTATTCTCTCTACACCAATGTAAGTTTGTCTCTTTCCCATTCTTATACTACTTTGGTTCATGAATTTCTTTATTTTGTTAGTATTTTCAAAATTCAAATCTAGTTCTGAAAACTCGAAGCAAAATGGATAGAAATGGTGCCCTTTTAAACGGGTTATTGTAAACATCACAAGCCTACCACTAGCAGGTATTGTTTGCTTTGGCCTCCACACACTTATATGGGATGTTTTGTTCTCCTCTCAAACCGACGTGGGATCTGACAGTTAGTTTGCTTATGCCAAATCTTAGTTGTTCAGCTTTAGACTTTTTGAGGATGGTTGTGTTTATGTTTCTCTAACCTTGAGATTTTGATTATCTATCTTATAATCAAGGGTGTTTTATGAGAAATTTAGGACCTTCTAACTCGACCCTCCAAGAAAAATAGAACAATAGAAACTCCCAACCCTGCACCTACTTACTTGTTTTTGGTGAACATCTTGGTATCAGGAAGGGAAGGGAAGGCAGGACCGGAAGTTGGCGGTGGCTCGGCATCGACGACGGAATGGGAGGTCAGAGTATAAAATAGCTCAGAGTGCAAGAGGGATATTGTGCAATGCAGATGATAGTTTTGTTGGATCCATGACTACAAACCTTGTTGGTTCGAAATATCATATATGGGATCAGGTTTAATGGAATGTTCAATTGTGTTGAATTAGAAAGAAGTTTGCAGAGTACCTATGATTATGACATGGTTTCTTTTCATGTTCGTTCTCAGGCGAGCCGACTGAAACCCATCCCGAGCCAGTCGAAATCGCTTCTTGCTGCTGTAACGTAGGCCGCCGCCCCATCTTTCCAGCTCTCTCTCTATTTTCTTCCCCCTCCCTATTTCTCGTTTGGAGTAACTGATTTGCCTGTTTTTTCTACAGATTCATGCCTACAATAACCACTTGGACAGGCAGTCATAGAAGCATGAAGGCTTTCATCCCCAAGCACCAAACAATTCAGCTGAAAAACACCAATCAGGTGCTTAAGAACATATGAAAACCTTTTCAACTCTTACAAGGCTTTGTGAGAATTTTGTACCAACAATGTGATGTGATGCTTTTAAATTTATAAAAATGTCAATAGAAACATGTGAGATCCCATGTCGATTGGAGAGGAGAACGAGTGCCAGCGAGGACACTAGACCCAATAGGGAGGTGGACTGTGAGATTCCACATCGGTTGGAGAGTGGAACAAAACATTCTTTTACAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTTAAAATCTTGAGGGGAAGCCTATAAAAGTCATTGAGTTGCTATTAGTATTTCATATTCATATTGTAGGCATTTCTAATACTTGTCGACATGTTTCGAACGTTTTCGAAACTTTTTAAATAGCTGCTTGATTGTATGCTGTAGCAGGTGCAGCACATAGCAGGGCTGCCAAGGGAGTGGGAGGAAGAAAAGACCAAAGTCCACCAGCTTGTTTCTAGAGTTCCTCAATACAACAAGGTGAATTGGAAATTGCAATTCAAAACTCTTCAATAGAGACTTGAAGTCTTTTGGGATATTCCTCAATGTTTCATTGCTCTTGGTTGTTCTTCAGATTTCTAAGCAATATGAGTTGGACTTCAGAGACAGAGGGAGAGCAGTTTCAGGTCTTATGATCCAAACCTCTGTGAAGAATTTTCAGTTAACTTTAGAGGTACAAATCTACATTCTAATGAGATAGAAGAGAATGAATTTCAATTAGAAGAGGCTGAGCTTGTTAGTGGGTTTTTGGCACAGGAAAATGGCAAGCAAACAATTCTCCAACTTGGAAGGATTGGGAAGTCCAAGTATGTGATGGATTATAGGTAAGCAGATCAATTCCTAGTCAGCCCTTCTTTGTGTTCATTGGAAATAAAACCGACCAAAACCAACTGGATGTCCTACCATTTAGTCGTTGTACTTTCATGCTACTATCTAAAAGGTCATCGACTAGTTAGAAAACGAAACCATTAGATATAAAATTGAATTTTGTGTCTATTAGAACATTAAAGTTTCAATTAGCTCATAGACTTGTGGGATGTTGATATAATTTATGGGGTGTTTTGTGTTTTGGCAGGTATCCATTGACAGGTTACCAAGCATTTTGCATATGCCTGGCTTCCATAGATTCAAAGCTTTGTTGCTCAGTATGATAATCCTTGGCTGCTTCTCAGCTCTTTTGCTGTTCAATCTCTGAACAACTTTCCTTGCAATGGCCTGACTTACCAAAGATCGATGCAACCCTAATTGAAGATGTATTTGTAAATTCTCTTGACTTAAGAGTTCTGAATTTTGATGATTAACAATGTTTTGCTTTAATGCTTTTGGTGAATCAAGTTTCTCTTTTGGATCAATTGGCCTAATAATTTGCAAATATTAGAGCATCTAAAAGGAGAATATAGTTTATCTAAACATAAGATTAAATTATACAAAATACTATCGAACTTTAAGAACTTTAATAATTTGACAAAATCGAACAAATTTATTATACCTACAATCAATTTTCCTGGAGGAGTTGAGCTGGTATACCGTCAAGACTTTCAATTTCCAGCTAACCAAATCACAATCACTCGCCAAGTGTGTAGCCCGGACCC

mRNA sequence

CAGGTTATGAATCCAGAGATAGAGACTAGACCACAAAATACCTTCCCCCATTTTCTCATTCTCTTAACTCTTCCCCTGTTCTTGTCTCAACAGACAAAAGCATGAGTGGTGACAAGAAGACGATCATTCAACGCCAAACTTCCTATAATCCTCTCTATGTTAATCCCCTTACTGACCTCCGGCACAACCGTAGCTGTAGCGACGGCGGATTCCGGCAAGGTAAGGAAAACTTGACACCCAATACGAAGGAGAAACAGAGCGATGAAAATGGAGTTCTCTGCGACAAAGAAAACGCGATTCCGATTAATGGGTCTTGTGCTAATCCTAAGAAATTTGGGGATTTCAAGTCGTTTTCGACTGGGAAGGCGTTGAAGCCTTCGTCGCTTCATCTGTGTATGCAGATGAATGAACCAGATAAGGTTTTTGGGTCTAAGTTGTGGGAGGGGACTGATTCAGAGCATTCGAGTTCGTTGAAGATTTGGGACTTTTCGGATTCTGAAGCTGCTCCAGCTTCTTCTTGGTCCACATTGCCTAACAGGTCGTTGTTGTGTAGGCCATTGCCTGTGGATGTGGGGAGATGTACCTGTGTCATTGTGAAGGAGAAGTCACCGGATGGGCTTCGTGGTGGTGCTTTCTATTCTCTCTACACCAATGAAGGGAAGGGAAGGCAGGACCGGAAGTTGGCGGTGGCTCGGCATCGACGACGGAATGGGAGGTCAGAGTATAAAATAGCTCAGAGTGCAAGAGGGATATTGTGCAATGCAGATGATAGTTTTGTTGGATCCATGACTACAAACCTTGTTGGTTCGAAATATCATATATGGGATCAGGCGAGCCGACTGAAACCCATCCCGAGCCAGTCGAAATCGCTTCTTGCTGCTGTAACATTCATGCCTACAATAACCACTTGGACAGGCAGTCATAGAAGCATGAAGGCTTTCATCCCCAAGCACCAAACAATTCAGCTGAAAAACACCAATCAGGTGCAGCACATAGCAGGGCTGCCAAGGGAGTGGGAGGAAGAAAAGACCAAAGTCCACCAGCTTGTTTCTAGAGTTCCTCAATACAACAAGATTTCTAAGCAATATGAGTTGGACTTCAGAGACAGAGGGAGAGCAGTTTCAGGTCTTATGATCCAAACCTCTGTGAAGAATTTTCAGTTAACTTTAGAGGAAAATGGCAAGCAAACAATTCTCCAACTTGGAAGGATTGGGAAGTCCAAGTATGTGATGGATTATAGGTATCCATTGACAGGTTACCAAGCATTTTGCATATGCCTGGCTTCCATAGATTCAAAGCTTTGTTGCTCAGTATGATAATCCTTGGCTGCTTCTCAGCTCTTTTGCTGTTCAATCTCTGAACAACTTTCCTTGCAATGGCCTGACTTACCAAAGATCGATGCAACCCTAATTGAAGATGTATTTGTAAATTCTCTTGACTTAAGAGTTCTGAATTTTGATGATTAACAATGTTTTGCTTTAATGCTTTTGGTGAATCAAGTTTCTCTTTTGGATCAATTGGCCTAATAATTTGCAAATATTAGAGCATCTAAAAGGAGAATATAGTTTATCTAAACATAAGATTAAATTATACAAAATACTATCGAACTTTAAGAACTTTAATAATTTGACAAAATCGAACAAATTTATTATACCTACAATCAATTTTCCTGGAGGAGTTGAGCTGGTATACCGTCAAGACTTTCAATTTCCAGCTAACCAAATCACAATCACTCGCCAAGTGTGTAGCCCGGACCC

Coding sequence (CDS)

ATGAGTGGTGACAAGAAGACGATCATTCAACGCCAAACTTCCTATAATCCTCTCTATGTTAATCCCCTTACTGACCTCCGGCACAACCGTAGCTGTAGCGACGGCGGATTCCGGCAAGGTAAGGAAAACTTGACACCCAATACGAAGGAGAAACAGAGCGATGAAAATGGAGTTCTCTGCGACAAAGAAAACGCGATTCCGATTAATGGGTCTTGTGCTAATCCTAAGAAATTTGGGGATTTCAAGTCGTTTTCGACTGGGAAGGCGTTGAAGCCTTCGTCGCTTCATCTGTGTATGCAGATGAATGAACCAGATAAGGTTTTTGGGTCTAAGTTGTGGGAGGGGACTGATTCAGAGCATTCGAGTTCGTTGAAGATTTGGGACTTTTCGGATTCTGAAGCTGCTCCAGCTTCTTCTTGGTCCACATTGCCTAACAGGTCGTTGTTGTGTAGGCCATTGCCTGTGGATGTGGGGAGATGTACCTGTGTCATTGTGAAGGAGAAGTCACCGGATGGGCTTCGTGGTGGTGCTTTCTATTCTCTCTACACCAATGAAGGGAAGGGAAGGCAGGACCGGAAGTTGGCGGTGGCTCGGCATCGACGACGGAATGGGAGGTCAGAGTATAAAATAGCTCAGAGTGCAAGAGGGATATTGTGCAATGCAGATGATAGTTTTGTTGGATCCATGACTACAAACCTTGTTGGTTCGAAATATCATATATGGGATCAGGCGAGCCGACTGAAACCCATCCCGAGCCAGTCGAAATCGCTTCTTGCTGCTGTAACATTCATGCCTACAATAACCACTTGGACAGGCAGTCATAGAAGCATGAAGGCTTTCATCCCCAAGCACCAAACAATTCAGCTGAAAAACACCAATCAGGTGCAGCACATAGCAGGGCTGCCAAGGGAGTGGGAGGAAGAAAAGACCAAAGTCCACCAGCTTGTTTCTAGAGTTCCTCAATACAACAAGATTTCTAAGCAATATGAGTTGGACTTCAGAGACAGAGGGAGAGCAGTTTCAGGTCTTATGATCCAAACCTCTGTGAAGAATTTTCAGTTAACTTTAGAGGAAAATGGCAAGCAAACAATTCTCCAACTTGGAAGGATTGGGAAGTCCAAGTATGTGATGGATTATAGGTATCCATTGACAGGTTACCAAGCATTTTGCATATGCCTGGCTTCCATAGATTCAAAGCTTTGTTGCTCAGTATGA

Protein sequence

MSGDKKTIIQRQTSYNPLYVNPLTDLRHNRSCSDGGFRQGKENLTPNTKEKQSDENGVLCDKENAIPINGSCANPKKFGDFKSFSTGKALKPSSLHLCMQMNEPDKVFGSKLWEGTDSEHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIVKEKSPDGLRGGAFYSLYTNEGKGRQDRKLAVARHRRRNGRSEYKIAQSARGILCNADDSFVGSMTTNLVGSKYHIWDQASRLKPIPSQSKSLLAAVTFMPTITTWTGSHRSMKAFIPKHQTIQLKNTNQVQHIAGLPREWEEEKTKVHQLVSRVPQYNKISKQYELDFRDRGRAVSGLMIQTSVKNFQLTLEENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV
Homology
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BLAST of Cp4.1LG17g08610 vs. Swiss-Prot
Match: TLP8_ARATH (Tubby-like protein 8 OS=Arabidopsis thaliana GN=TULP8 PE=2 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 8.0e-123
Identity = 224/370 (60.54%), Postives = 282/370 (76.22%), Query Frame = 1 

Query: 39  QGKENLTPNTKEKQSDENGVLCDKENAIPINGSCANPKKFGDFKSFSTG--KALKPSSLH 98
           + KEN++P  K   S E   L     +  + G+   P +  +FKSFSTG   ALK SSL 
Sbjct: 31  EDKENVSPE-KVSTSVETRKLDRALKSQSMKGNSGFPTEVTNFKSFSTGGRTALKQSSLQ 90

Query: 99  LCMQMN-EPDKV-FGSKLWEGTDSEHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLP 158
            CMQ N E DK  FG K W   DSEHSSSLK+W+FSDSEAAPASSWSTLPNR+LLC+ LP
Sbjct: 91  ACMQKNSEVDKSSFGMKTWTSVDSEHSSSLKVWEFSDSEAAPASSWSTLPNRALLCKTLP 150

Query: 159 VDVGRCTCVIVKEKSPDGLRGGAFYSLYTNEGKGRQDRKLAVARHRRRNGRSEYKIAQSA 218
           +DVGRCTC+IVKE+SP+GL  G+ YSLYT+EG+GR+DRKLAVA H RRNG+S +++AQ+ 
Sbjct: 151 LDVGRCTCLIVKEQSPEGLSHGSVYSLYTHEGRGRKDRKLAVAYHSRRNGKSIFRVAQNV 210

Query: 219 RGILCNADDSFVGSMTTNLVGSKYHIWDQASRLKPIPSQSKSLLAAVTFMPTITTWTGSH 278
           +G+LC++D+S+VGSMT NL+GSKY+IWD+  R+  +    K LL+ V F PTITTWTGS+
Sbjct: 211 KGLLCSSDESYVGSMTANLLGSKYYIWDKGVRVGSVGKMVKPLLSVVIFTPTITTWTGSY 270

Query: 279 RSMKAFIPKHQTIQLKNTNQVQHIAGLPREWEEEKTKVHQLVSRVPQYNKISKQYELDFR 338
           R M+  +PK Q +Q  N  QVQ  + LP +W E K K+ +L SR+P YNKISKQ+ELDFR
Sbjct: 271 RRMRTLLPKQQPMQKNNNKQVQQASKLPLDWLENKEKIQKLCSRIPHYNKISKQHELDFR 330

Query: 339 DRGRAVSGLMIQTSVKNFQLTLEENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLA 398
           DRGR  +GL IQ+SVKNFQLTL E  +QTILQ+GR+ K++YV+D+RYP +GYQAFCICLA
Sbjct: 331 DRGR--TGLRIQSSVKNFQLTLTETPRQTILQMGRVDKARYVIDFRYPFSGYQAFCICLA 390

Query: 399 SIDSKLCCSV 405
           SIDSKLCC+V
Sbjct: 391 SIDSKLCCTV 397

[Close]
BLAST of Cp4.1LG17g08610 vs. Swiss-Prot
Match: TLP4_ORYSJ (Tubby-like protein 4 OS=Oryza sativa subsp. japonica GN=TULP4 PE=3 SV=2)

HSP 1 Score: 392.9 bits (1008), Expect = 4.3e-108
Identity = 192/289 (66.44%), Postives = 237/289 (82.01%), Query Frame = 1 

Query: 121 SSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIVKEK---SPDGLRGGA 180
           SSS + WD SD+EAAPASSW+TLPNR+LLCRPLP+DVGRCTC+I KE    +  G RG A
Sbjct: 132 SSSYEAWDLSDNEAAPASSWATLPNRALLCRPLPLDVGRCTCIIAKETLAAAAAGARGVA 191

Query: 181 FYSLYTNEGKGRQDRKLAVARHRRRNGRSEYKIAQSARGILCNADDSFVGSMTTNLVGSK 240
            YSLYTNEG+GRQDRKLAVARHRRR GRSE+ +AQ+  GI C +D +F+G++++NLVGS+
Sbjct: 192 LYSLYTNEGQGRQDRKLAVARHRRRRGRSEFVVAQNLDGIFCTSDKNFLGTLSSNLVGSR 251

Query: 241 YHIWDQASRLKPIPSQSKSLLAAVTFMPTITTWTGSHRSMKAFIPKHQTIQLKNTN--QV 300
           Y IW Q +R+  I SQSK LL  V F PT+TT TGS RSM+A+IPK+Q+I LKN+N  Q+
Sbjct: 252 YRIWGQGNRVDEIKSQSKRLLGVVAFAPTVTTLTGSFRSMRAWIPKNQSIHLKNSNSAQI 311

Query: 301 QHIAGLPREWEEEKTKVHQLVSRVPQYNKISKQYELDFRDRGRAVSGLMIQTSVKNFQLT 360
           QHI+GLP++W+E+K K  QL SR P YN ++K+YELDFR+R   + G  +Q SVKNFQ+T
Sbjct: 312 QHISGLPKDWQEKKIKADQLCSRSPFYNNMTKRYELDFRERAGRM-GYKVQPSVKNFQMT 371

Query: 361 LEENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV 405
           LEE G+QTILQLGRIGKSKY+MD+RYPLTGYQA CICLASIDSKLCC++
Sbjct: 372 LEEKGRQTILQLGRIGKSKYIMDFRYPLTGYQALCICLASIDSKLCCTL 419

[Close]
BLAST of Cp4.1LG17g08610 vs. Swiss-Prot
Match: TUB_HUMAN (Tubby protein homolog OS=Homo sapiens GN=TUB PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 4.8e-19
Identity = 76/267 (28.46%), Postives = 132/267 (49.44%), Query Frame = 1 

Query: 151 RPLPVDVGRCTCVIVKEKSPDGLRGGAF--YSLYTNEGKGRQDRKLAVARHRRRNGRSEY 210
           RP P  +    C I ++K   G+  G +  Y L+ +   G++   LA  R R+++  S Y
Sbjct: 257 RPAPQGI-TIKCRITRDKK--GMDRGMYPTYFLHLDREDGKKVFLLA-GRKRKKSKTSNY 316

Query: 211 KIAQSARGILCNADDSFVGSMTTNLVGSKYHIWDQASRLKPIPSQSKSL--------LAA 270
            I+      L    DS++G + +NL+G+K+ ++D    + P  + S +L        LAA
Sbjct: 317 LISVDPTD-LSRGGDSYIGKLRSNLMGTKFTVYDNG--VNPQKASSSTLESGTLRQELAA 376

Query: 271 VTFMPTITTWTGSHRSMKAFIPK----HQTIQLKNTNQVQHIAGLPREWEEEKTK-VHQL 330
           V +   +  + G  R M   +P     H+ + ++  N+ + +      W+ + T+ + +L
Sbjct: 377 VCYETNVLGFKGP-RKMSVIVPGMNMVHERVSIRPRNEHETLLA---RWQNKNTESIIEL 436

Query: 331 VSRVPQYNKISKQYELDFRDRGRAVSGLMIQTSVKNFQLTLEENGKQTILQLGRIGKSKY 390
            ++ P +N  ++ Y L+F  R       + Q SVKNFQ+    +    ++Q GR+ +  +
Sbjct: 437 QNKTPVWNDDTQSYVLNFHGR-------VTQASVKNFQIIHGNDPDYIVMQFGRVAEDVF 496

Query: 391 VMDYRYPLTGYQAFCICLASIDSKLCC 403
            MDY YPL   QAF I L+S DSKL C
Sbjct: 497 TMDYNYPLCALQAFAIALSSFDSKLAC 505

[Close]
BLAST of Cp4.1LG17g08610 vs. Swiss-Prot
Match: TUB_RAT (Tubby protein homolog OS=Rattus norvegicus GN=Tub PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.1e-18
Identity = 76/267 (28.46%), Postives = 132/267 (49.44%), Query Frame = 1 

Query: 151 RPLPVDVGRCTCVIVKEKSPDGLRGGAF--YSLYTNEGKGRQDRKLAVARHRRRNGRSEY 210
           RP P  +    C I ++K   G+  G +  Y L+ +   G++   LA  R R+++  S Y
Sbjct: 256 RPAPQGI-TIKCRITRDKK--GMDRGMYPTYFLHLDREDGKKVFLLA-GRKRKKSKTSNY 315

Query: 211 KIAQSARGILCNADDSFVGSMTTNLVGSKYHIWDQASRLKPIPSQSKSL--------LAA 270
            I+      L    DS++G + +NL+G+K+ ++D    + P  + S +L        LAA
Sbjct: 316 LISVDPTD-LSRGGDSYIGKLRSNLMGTKFTVYDNG--VNPQKASSSTLESGTLRQELAA 375

Query: 271 VTFMPTITTWTGSHRSMKAFIPK----HQTIQLKNTNQVQHIAGLPREWEEEKTK-VHQL 330
           V +   +  + G  R M   +P     H+ + ++  N+ + +      W+ + T+ + +L
Sbjct: 376 VCYETNVLGFKGP-RKMSVIVPGMNMVHERVCIRPRNEHETLLA---RWQNKNTESIIEL 435

Query: 331 VSRVPQYNKISKQYELDFRDRGRAVSGLMIQTSVKNFQLTLEENGKQTILQLGRIGKSKY 390
            ++ P +N  ++ Y L+F  R       + Q SVKNFQ+    +    ++Q GR+ +  +
Sbjct: 436 QNKTPVWNDDTQSYVLNFHGR-------VTQASVKNFQIIHGNDPDYIVMQFGRVAEDVF 495

Query: 391 VMDYRYPLTGYQAFCICLASIDSKLCC 403
            MDY YPL   QAF I L+S DSKL C
Sbjct: 496 TMDYNYPLCALQAFAIALSSFDSKLAC 504

[Close]
BLAST of Cp4.1LG17g08610 vs. Swiss-Prot
Match: TUB_MOUSE (Tubby protein OS=Mus musculus GN=Tub PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.1e-18
Identity = 76/267 (28.46%), Postives = 132/267 (49.44%), Query Frame = 1 

Query: 151 RPLPVDVGRCTCVIVKEKSPDGLRGGAF--YSLYTNEGKGRQDRKLAVARHRRRNGRSEY 210
           RP P  +    C I ++K   G+  G +  Y L+ +   G++   LA  R R+++  S Y
Sbjct: 256 RPAPQGI-TIKCRITRDKK--GMDRGMYPTYFLHLDREDGKKVFLLA-GRKRKKSKTSNY 315

Query: 211 KIAQSARGILCNADDSFVGSMTTNLVGSKYHIWDQASRLKPIPSQSKSL--------LAA 270
            I+      L    DS++G + +NL+G+K+ ++D    + P  + S +L        LAA
Sbjct: 316 LISVDPTD-LSRGGDSYIGKLRSNLMGTKFTVYDNG--VNPQKASSSTLESGTLRQELAA 375

Query: 271 VTFMPTITTWTGSHRSMKAFIPK----HQTIQLKNTNQVQHIAGLPREWEEEKTK-VHQL 330
           V +   +  + G  R M   +P     H+ + ++  N+ + +      W+ + T+ + +L
Sbjct: 376 VCYETNVLGFKGP-RKMSVIVPGMNMVHERVCIRPRNEHETLLA---RWQNKNTESIIEL 435

Query: 331 VSRVPQYNKISKQYELDFRDRGRAVSGLMIQTSVKNFQLTLEENGKQTILQLGRIGKSKY 390
            ++ P +N  ++ Y L+F  R       + Q SVKNFQ+    +    ++Q GR+ +  +
Sbjct: 436 QNKTPVWNDDTQSYVLNFHGR-------VTQASVKNFQIIHGNDPDYIVMQFGRVAEDVF 495

Query: 391 VMDYRYPLTGYQAFCICLASIDSKLCC 403
            MDY YPL   QAF I L+S DSKL C
Sbjct: 496 TMDYNYPLCALQAFAIALSSFDSKLAC 504

[Close]
BLAST of Cp4.1LG17g08610 vs. TrEMBL
Match: A0A0A0KBM7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G431340 PE=3 SV=1)

HSP 1 Score: 743.4 bits (1918), Expect = 1.4e-211
Identity = 371/409 (90.71%), Postives = 385/409 (94.13%), Query Frame = 1 

Query: 1   MSGDKKTIIQRQTSYNPLYVNPLTDLRHNRSCSDGG-FRQGKENLTPNTKEKQSDENG-- 60
           M GDKK+II RQ+SYN LY+NPLTDLRHNRSCSDGG FRQGKENLTPNTK+KQ DE    
Sbjct: 1   MIGDKKSIIPRQSSYNSLYLNPLTDLRHNRSCSDGGGFRQGKENLTPNTKDKQRDEPAPA 60

Query: 61  VLCDKENAIPINGSCANPKK-FGDFKSFSTGKALKPSSLHLCMQMNEPDKVFGSKLWEGT 120
           VLCDKEN IP NG CAN K+ FGDFKSFS GKALKPSSLHLCMQMNEPDKVF S+LW+GT
Sbjct: 61  VLCDKENVIPANGFCANSKQQFGDFKSFSNGKALKPSSLHLCMQMNEPDKVFASRLWDGT 120

Query: 121 DSEHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIVKEKSPDGLRGG 180
           DSEHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIVKEKSPDGL GG
Sbjct: 121 DSEHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIVKEKSPDGLHGG 180

Query: 181 AFYSLYTNEGKGRQDRKLAVARHRRRNGRSEYKIAQSARGILCNADDSFVGSMTTNLVGS 240
           AFYSLYTNEGKGRQDRKLAVARH RR GRSEYKIAQSARGILCNADDSFVGSMTTNLVGS
Sbjct: 181 AFYSLYTNEGKGRQDRKLAVARHGRRKGRSEYKIAQSARGILCNADDSFVGSMTTNLVGS 240

Query: 241 KYHIWDQASRLKPIPSQSKSLLAAVTFMPTITTWTGSHRSMKAFIPKHQTIQLKNTN-QV 300
           KY+IWDQ SRLKPIP+QS+SLL AVTF PTITTWTGSHRSMKAFIPKHQ++QLKNTN QV
Sbjct: 241 KYYIWDQGSRLKPIPTQSRSLLGAVTFTPTITTWTGSHRSMKAFIPKHQSMQLKNTNQQV 300

Query: 301 QHIAGLPREWEEEKTKVHQLVSRVPQYNKISKQYELDFRDRGRAVSGLMIQTSVKNFQLT 360
           QHIAGLPREWEEEK KVHQLVS+VPQYNKISKQYELDFRDRGRAVSGL+IQTSVKNFQLT
Sbjct: 301 QHIAGLPREWEEEKAKVHQLVSKVPQYNKISKQYELDFRDRGRAVSGLVIQTSVKNFQLT 360

Query: 361 LEENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV 405
           LEENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV
Sbjct: 361 LEENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV 409

[Close]
BLAST of Cp4.1LG17g08610 vs. TrEMBL
Match: A0A061GGL2_THECC (Tubby like protein 8 isoform 1 OS=Theobroma cacao GN=TCM_027570 PE=3 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 8.3e-151
Identity = 262/419 (62.53%), Postives = 322/419 (76.85%), Query Frame = 1 

Query: 1   MSGDKKTIIQRQTSYNPLYVNPLTDLRHNRSCSDGG------------FRQGKENLTPNT 60
           MS  K+ ++QRQ SY   YVNPLTDL+H+RSCS+G             F  GKEN  P T
Sbjct: 1   MSDFKEPLVQRQASYTSPYVNPLTDLKHSRSCSEGNHATFTDNKENVFFGVGKENAAPTT 60

Query: 61  KEKQSDENGVLCDKEN---AIPINGSCANPKKFGDFKSFSTGKALKPSSLHLCMQMNEPD 120
               S  +  +  +     ++   G+    K+   +KS STGK LK SSL  CMQMNEPD
Sbjct: 61  NNGSSSSSSSVAKRITHLKSLSTIGTFDASKEVSSYKSLSTGKVLKESSLQFCMQMNEPD 120

Query: 121 KVFGSKLWEGTDSEHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIV 180
           K FG KLW+  DSE+S+SL IWD+SDSEAAPASSWSTLPNR+LLCRPLP+D+GRCTCVIV
Sbjct: 121 KAFGCKLWDPIDSENSNSLNIWDYSDSEAAPASSWSTLPNRALLCRPLPLDIGRCTCVIV 180

Query: 181 KEKSPDGLRGGAFYSLYTNEGKGRQDRKLAVARHRRRNGRSEYKIAQSARGILCNADDSF 240
           KE SP+G  GG  YSLYTNEG+GRQDRKLAVA H+R+NG+S + IAQ+ +GIL N+DDS+
Sbjct: 181 KESSPEGFAGGTLYSLYTNEGQGRQDRKLAVAYHKRQNGKSMFSIAQNTKGILSNSDDSY 240

Query: 241 VGSMTTNLVGSKYHIWDQASRLKPIPSQSKSLLAAVTFMPTITTWTGSHRSMKAFIPKHQ 300
           +G MT NL+GSKY+IWDQA R K +  QS  LL  +TFMPTI TWTG++RSMK +IPKHQ
Sbjct: 241 IGLMTANLIGSKYNIWDQAGRTKSLNKQSNPLLGVITFMPTIVTWTGNYRSMKVYIPKHQ 300

Query: 301 TIQLKNTNQVQHIAGLPREWEEEKTKVHQLVSRVPQYNKISKQYELDFRDRGRAVSGLMI 360
           ++Q+KN  Q+QHI+GLP++WE +  K+H+L SR+P+YN + K+YELDFRDRGRA  GL I
Sbjct: 301 SMQMKNVTQMQHISGLPKDWEGKMDKIHKLFSRIPRYNNMLKKYELDFRDRGRA--GLRI 360

Query: 361 QTSVKNFQLTLEENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV 405
           Q+SVKNFQLT EENG+QTILQLGR+ + KYVMD+RYPLTGYQAFCICLASIDSKLCC++
Sbjct: 361 QSSVKNFQLTFEENGRQTILQLGRVDRYKYVMDFRYPLTGYQAFCICLASIDSKLCCAM 417

[Close]
BLAST of Cp4.1LG17g08610 vs. TrEMBL
Match: A0A0B0PJW6_GOSAR (Tubby-like protein 8 OS=Gossypium arboreum GN=F383_01489 PE=3 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 9.1e-150
Identity = 267/414 (64.49%), Postives = 316/414 (76.33%), Query Frame = 1 

Query: 5   KKTIIQRQTSYNPLYVNPLTDLRHNRSCSDGG------------FRQGKENLTPNTKEKQ 64
           K  ++QRQ S N  YVNPL DL+HNRSCS+G             F  GKEN  P+T    
Sbjct: 5   KDPLVQRQESCNAPYVNPLIDLKHNRSCSEGNPASFSDNKENVVFGAGKENAAPSTNNGS 64

Query: 65  SDENGVLCDKENAIPIN--GSCANPKKFGDFKSFSTGKALKPSSLHLCMQMNEPDKVFGS 124
           S          +   ++  G+    K+   +KS STGK LK SSL  CMQMNEPDK FG 
Sbjct: 65  SSSEVAKKTTTHLKSLSTIGTFDASKEVTSYKSLSTGKVLKESSLQFCMQMNEPDKAFGC 124

Query: 125 KLWEGTDSEHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIVKEKSP 184
           KLW+  DS++S+SL IWD+SDSEAAPASSWSTLPNR+LLCRPLP+D+GRCTCVIVKE  P
Sbjct: 125 KLWDPIDSDNSASLNIWDYSDSEAAPASSWSTLPNRALLCRPLPLDIGRCTCVIVKEPLP 184

Query: 185 DGLRGGAFYSLYTNEGKGRQDRKLAVARHRRRNGRSEYKIAQSARGILCNADDSFVGSMT 244
           DG  GG  YSLYTNEGKGRQDRKLAVA H+RRNG+S Y IAQ+ +GIL N+DDS VG MT
Sbjct: 185 DGFHGGTLYSLYTNEGKGRQDRKLAVAHHKRRNGKSVYAIAQTTKGILSNSDDSCVGLMT 244

Query: 245 TNLVGSKYHIWDQASRLKPIPSQSKSLLAAVTFMPTITTWTGSHRSMKAFIPKHQTIQLK 304
            NL+GSKYHIW+Q  R K    QS  LL  V FMPTI TWTGS+RSMKA+IPKHQ++QLK
Sbjct: 245 ANLLGSKYHIWNQNGRTKSSNKQSNPLLGVVRFMPTIATWTGSYRSMKAYIPKHQSMQLK 304

Query: 305 NTNQVQHIAGLPREWEEEKTKVHQLVSRVPQYNKISKQYELDFRDRGRAVSGLMIQTSVK 364
           N  Q+QHI GLP++WEE+  K+H+L SR+P+YNK+ KQYELDFR+RGRA +GL IQ+SVK
Sbjct: 305 NVAQMQHINGLPKDWEEKMDKIHKLFSRIPRYNKMLKQYELDFRERGRA-AGLRIQSSVK 364

Query: 365 NFQLTLEENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV 405
           NFQLTLEENG+QTILQLGR+ + KYVMD+RYPLTGYQAFCICLAS+DSKLCC++
Sbjct: 365 NFQLTLEENGRQTILQLGRVDRHKYVMDFRYPLTGYQAFCICLASVDSKLCCTM 417

[Close]
BLAST of Cp4.1LG17g08610 vs. TrEMBL
Match: A0A059AIW9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03133 PE=3 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 1.6e-149
Identity = 278/419 (66.35%), Postives = 325/419 (77.57%), Query Frame = 1 

Query: 1   MSGDKKTIIQRQTSYNPLYVNPLTDLRHNRSCSDGGFRQG-------------KENLTPN 60
           M+  KKTI  RQ SYN LYVNPLTD RH RSCS+G   +G             KEN  PN
Sbjct: 1   MTPTKKTI-PRQFSYNTLYVNPLTDARHVRSCSEGIALEGHSNHSPVKLGDHRKENAHPN 60

Query: 61  TKEKQSDENGVLCDKENAIPINGSCANPKKFGDFKSFSTGKAL--KPSSLHLCMQMNEPD 120
            +   +D +    DKENA P + S A  K   + KS STGKAL  KPSSL  CMQM + D
Sbjct: 61  QEPDAADGD----DKENAAPKSWSAAVSKHSSNLKSLSTGKALNLKPSSLQFCMQMQDKD 120

Query: 121 KVFGSKLWEGTDSEHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIV 180
              GSKL +   SE+S S+ IWD+SDSE+APASSWSTLPNR+LLCRPLPVD+GRCTCVIV
Sbjct: 121 PNLGSKLRDPIGSENSHSVNIWDYSDSESAPASSWSTLPNRTLLCRPLPVDIGRCTCVIV 180

Query: 181 KEKSPDGLRGGAFYSLYTNEGKGRQDRKLAVARHRRRNGRSEYKIAQSARGILCNADDSF 240
           +EKS DG+ GG  YSLYTNEGKGRQDRKLAVA  +RRNG+S + IAQS +G+L N DDS+
Sbjct: 181 REKSIDGVSGGTLYSLYTNEGKGRQDRKLAVAFCKRRNGKSIFTIAQSVKGLLSNGDDSY 240

Query: 241 VGSMTTNLVGSKYHIWDQASRLKPIPSQSKSLLAAVTFMPTITTWTGSHRSMKAFIPKHQ 300
           +G++T N++GSKYHIWDQ   L  +   +K+LLA VTF+PTI TWTGSHR M+A+IPKHQ
Sbjct: 241 IGAVTANVMGSKYHIWDQGVSLDSVARGTKALLAVVTFVPTIATWTGSHRIMRAYIPKHQ 300

Query: 301 TIQLKNTNQVQHIAGLPREWEEEKTKVHQLVSRVPQYNKISKQYELDFRDRGRAVSGLMI 360
           ++QLKNT QV HI+GLP++WEE + +VHQLVSRVP YNKIS+QYELDFRDRGRA  GL I
Sbjct: 301 SMQLKNTTQVPHISGLPKDWEERRDRVHQLVSRVPHYNKISQQYELDFRDRGRA--GLKI 360

Query: 361 QTSVKNFQLTLEENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV 405
           Q SVKNFQL LEENGKQTILQLGR+GKSKYVMDYRYPLTGYQAFCICLASI++KLCC+V
Sbjct: 361 QRSVKNFQLNLEENGKQTILQLGRVGKSKYVMDYRYPLTGYQAFCICLASINTKLCCTV 412

[Close]
BLAST of Cp4.1LG17g08610 vs. TrEMBL
Match: A0A0D2TIG6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G121900 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 2.2e-148
Identity = 265/414 (64.01%), Postives = 315/414 (76.09%), Query Frame = 1 

Query: 5   KKTIIQRQTSYNPLYVNPLTDLRHNRSCSDGG------------FRQGKENLTPNTKEKQ 64
           K  ++QRQ S N  YVNPL DL+HNRSCS+G             F  GKEN  P+T    
Sbjct: 5   KDPLVQRQASCNAPYVNPLIDLKHNRSCSEGNPASFSDNKENVVFGAGKENAAPSTNNGS 64

Query: 65  SDENGVLCDKENAIPIN--GSCANPKKFGDFKSFSTGKALKPSSLHLCMQMNEPDKVFGS 124
           S          +   ++  G+    K+   +KS STGK LK SSL  CMQMNEPDK FG 
Sbjct: 65  SSSEAAKKTTTHLKSLSTIGTFDASKEVTSYKSLSTGKVLKESSLQFCMQMNEPDKAFGC 124

Query: 125 KLWEGTDSEHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIVKEKSP 184
           KLW+  DS++S+SL IWD+SDSEAAPASSWSTLPNR+LLCRPLP+D+GRCTCVIVKE  P
Sbjct: 125 KLWDPIDSDNSASLNIWDYSDSEAAPASSWSTLPNRALLCRPLPLDIGRCTCVIVKEPLP 184

Query: 185 DGLRGGAFYSLYTNEGKGRQDRKLAVARHRRRNGRSEYKIAQSARGILCNADDSFVGSMT 244
           DG  GG  +SLYTNEGKGRQDRKLAVA H+RRNG+S + IAQ+ +GIL N+DDS VG MT
Sbjct: 185 DGFHGGTLFSLYTNEGKGRQDRKLAVAYHKRRNGKSVFAIAQTTKGILSNSDDSCVGLMT 244

Query: 245 TNLVGSKYHIWDQASRLKPIPSQSKSLLAAVTFMPTITTWTGSHRSMKAFIPKHQTIQLK 304
            NL+GSKYHIW+Q  R      QS  LL  V FMPTI TWTGS+RSMKA+IPKHQ++QLK
Sbjct: 245 ANLLGSKYHIWNQNGRTMSSNKQSNPLLGVVRFMPTIATWTGSYRSMKAYIPKHQSMQLK 304

Query: 305 NTNQVQHIAGLPREWEEEKTKVHQLVSRVPQYNKISKQYELDFRDRGRAVSGLMIQTSVK 364
           N  Q+QHI GLP++WEE+  K+H+L SR+P+YNK+ KQYELDFR+RGRA +GL IQ+SVK
Sbjct: 305 NVAQMQHINGLPKDWEEKMDKIHKLFSRIPRYNKMLKQYELDFRERGRA-AGLRIQSSVK 364

Query: 365 NFQLTLEENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV 405
           NFQLTLEENG+QTILQLGR+ + KYVMD+RYPLTGYQAFCICLASIDSKLCC++
Sbjct: 365 NFQLTLEENGRQTILQLGRVDRYKYVMDFRYPLTGYQAFCICLASIDSKLCCTM 417

[Close]
BLAST of Cp4.1LG17g08610 vs. TAIR10
Match: AT1G16070.2 (AT1G16070.2 tubby like protein 8)

HSP 1 Score: 438.3 bits (1126), Expect = 5.0e-123
Identity = 224/371 (60.38%), Postives = 283/371 (76.28%), Query Frame = 1 

Query: 39  QGKENLTPNTKEKQSDENGVLCDKENAIPINGSCANPKKFGDFKSFSTG--KALKPSSLH 98
           + KEN++P  K   S E   L     +  + G+   P +  +FKSFSTG   ALK SSL 
Sbjct: 31  EDKENVSPE-KVSTSVETRKLDRALKSQSMKGNSGFPTEVTNFKSFSTGGRTALKQSSLQ 90

Query: 99  LCMQMN-EPDKV-FGSKLWEGTDSEHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLP 158
            CMQ N E DK  FG K W   DSEHSSSLK+W+FSDSEAAPASSWSTLPNR+LLC+ LP
Sbjct: 91  ACMQKNSEVDKSSFGMKTWTSVDSEHSSSLKVWEFSDSEAAPASSWSTLPNRALLCKTLP 150

Query: 159 VDVGRCTCVIVKEKSPDGLRGGAFYSLYTNEGKGRQDRKLAVARHRRRNGRSEYKIAQSA 218
           +DVGRCTC+IVKE+SP+GL  G+ YSLYT+EG+GR+DRKLAVA H RRNG+S +++AQ+ 
Sbjct: 151 LDVGRCTCLIVKEQSPEGLSHGSVYSLYTHEGRGRKDRKLAVAYHSRRNGKSIFRVAQNV 210

Query: 219 RGILCNADDSFVGSMTTNLVGSKYHIWDQASRLKPIPSQSKSLLAAVTFMPTITTWTGSH 278
           +G+LC++D+S+VGSMT NL+GSKY+IWD+  R+  +    K LL+ V F PTITTWTGS+
Sbjct: 211 KGLLCSSDESYVGSMTANLLGSKYYIWDKGVRVGSVGKMVKPLLSVVIFTPTITTWTGSY 270

Query: 279 RSMKAFIPKHQTIQLKNTNQVQHIAGLPREWEEEKTKVHQLVSRVPQYNKISKQYELDFR 338
           R M+  +PK Q +Q  N  QVQ  + LP +W E K K+ +L SR+P YNKISKQ+ELDFR
Sbjct: 271 RRMRTLLPKQQPMQKNNNKQVQQASKLPLDWLENKEKIQKLCSRIPHYNKISKQHELDFR 330

Query: 339 DRGRAVSGLMIQTSVKNFQLTL-EENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICL 398
           DRGR  +GL IQ+SVKNFQLTL +E  +QTILQ+GR+ K++YV+D+RYP +GYQAFCICL
Sbjct: 331 DRGR--TGLRIQSSVKNFQLTLTQETPRQTILQMGRVDKARYVIDFRYPFSGYQAFCICL 390

Query: 399 ASIDSKLCCSV 405
           ASIDSKLCC+V
Sbjct: 391 ASIDSKLCCTV 398

[Close]
BLAST of Cp4.1LG17g08610 vs. TAIR10
Match: AT2G18280.1 (AT2G18280.1 tubby like protein 2)

HSP 1 Score: 66.2 bits (160), Expect = 5.1e-11
Identity = 37/97 (38.14%), Postives = 57/97 (58.76%), Query Frame = 1 

Query: 315 LVSRVPQYNKISKQYELDFRDRGRAVSGLMIQTSVKNFQLTLE---------ENGKQTIL 374
           L ++ P++++  + + L+F+ R       +   SVKNFQL  E         E  ++ IL
Sbjct: 303 LKNKSPRWHEQLQCWCLNFKGR-------VTVASVKNFQLVAEIDASLDAPPEEHERVIL 362

Query: 375 QLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCC 403
           Q G+IGK  + MDYRYPL+ +QAF IC++S D+K  C
Sbjct: 363 QFGKIGKDIFTMDYRYPLSAFQAFAICISSFDTKPAC 392

[Close]
BLAST of Cp4.1LG17g08610 vs. TAIR10
Match: AT2G47900.3 (AT2G47900.3 tubby like protein 3)

HSP 1 Score: 65.9 bits (159), Expect = 6.7e-11
Identity = 36/95 (37.89%), Postives = 58/95 (61.05%), Query Frame = 1 

Query: 315 LVSRVPQYNKISKQYELDFRDRGRAVSGLMIQTSVKNFQLTLE-ENG------KQTILQL 374
           L ++ P++++  + + L+F       +G +   SVKNFQL    ENG      +  ILQ 
Sbjct: 319 LKNKAPRWHEQLQCWCLNF-------NGRVTVASVKNFQLVAAPENGPAGPEHENVILQF 378

Query: 375 GRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCC 403
           G++GK  + MDY+YP++ +QAF ICL+S D+K+ C
Sbjct: 379 GKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIAC 406

[Close]
BLAST of Cp4.1LG17g08610 vs. TAIR10
Match: AT1G47270.1 (AT1G47270.1 tubby like protein 6)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-10
Identity = 62/274 (22.63%), Postives = 118/274 (43.07%), Query Frame = 1 

Query: 174 RGGAFYSLYTNEG---KGRQDRKLAVARHRRRNGRSEYKIAQSARGILCNADDSFVGSMT 233
           R    Y LY        G + + L  A+  RR   +E+ ++ S       +  +++G + 
Sbjct: 148 RATGIYRLYLGLSPALSGDKSKLLLSAKRVRRATGAEFVVSLSGNDF-SRSSSNYIGKLR 207

Query: 234 TNLVGSKYHIWDQ-----------ASRLKPIPSQSKSL--LAAVTFMPTITTWTGSHRSM 293
           +N +G+K+ +++            + ++ P  S S S   +A++ +   +    G  R M
Sbjct: 208 SNFLGTKFTVYENQPPPFNRKLPPSMQVSPWVSSSSSSYNIASILYELNVLRTRGPRR-M 267

Query: 294 KAFIPKHQTIQLKNTNQVQHIAGLPREWEEEKTKVHQLVS-----------------RVP 353
           +  +       ++   ++Q       + +++K  +    S                 + P
Sbjct: 268 QCIMHSIPISAIQEGGKIQSPTEFTNQGKKKKKPLMDFCSGNLGGESVIKEPLILKNKSP 327

Query: 354 QYNKISKQYELDFRDRGRAVSGLMIQTSVKNFQLTL------------EENGKQTILQLG 403
           ++++  + + L+F+ R       +   SVKNFQL              EE   + ILQ G
Sbjct: 328 RWHEQLQCWCLNFKGR-------VTVASVKNFQLVAAAAEAGKNMNIPEEEQDRVILQFG 387

[Close]
BLAST of Cp4.1LG17g08610 vs. TAIR10
Match: AT1G25280.1 (AT1G25280.1 tubby like protein 10)

HSP 1 Score: 62.8 bits (151), Expect = 5.7e-10
Identity = 40/125 (32.00%), Postives = 63/125 (50.40%), Query Frame = 1 

Query: 300 GLPREWEEEKTKVHQLV--SRVPQYNKISKQYELDFRDRGRAVSGLMIQTSVKNFQLTLE 359
           G+  +  EE+     L+  ++ P++++  + + L+FR R       +   SVKNFQL   
Sbjct: 327 GISCDDNEEEASFRPLILKNKQPRWHEQLQCWCLNFRGR-------VTVASVKNFQLVAA 386

Query: 360 ENGK--------------------QTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASID 403
              +                    + ILQ G++GK  + MDYRYPL+ +QAF ICL+S D
Sbjct: 387 RQPQPQGTGAAAAPTSAPAHPEQDKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFD 444

[Close]
BLAST of Cp4.1LG17g08610 vs. NCBI nr
Match: gi|449436213|ref|XP_004135888.1| (PREDICTED: tubby-like protein 8 isoform X2 [Cucumis sativus])

HSP 1 Score: 748.0 bits (1930), Expect = 8.3e-213
Identity = 371/408 (90.93%), Postives = 385/408 (94.36%), Query Frame = 1 

Query: 1   MSGDKKTIIQRQTSYNPLYVNPLTDLRHNRSCSDGG-FRQGKENLTPNTKEKQSDENG-- 60
           M GDKK+II RQ+SYN LY+NPLTDLRHNRSCSDGG FRQGKENLTPNTK+KQ DE    
Sbjct: 1   MIGDKKSIIPRQSSYNSLYLNPLTDLRHNRSCSDGGGFRQGKENLTPNTKDKQRDEPAPA 60

Query: 61  VLCDKENAIPINGSCANPKK-FGDFKSFSTGKALKPSSLHLCMQMNEPDKVFGSKLWEGT 120
           VLCDKEN IP NG CAN K+ FGDFKSFS GKALKPSSLHLCMQMNEPDKVF S+LW+GT
Sbjct: 61  VLCDKENVIPANGFCANSKQQFGDFKSFSNGKALKPSSLHLCMQMNEPDKVFASRLWDGT 120

Query: 121 DSEHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIVKEKSPDGLRGG 180
           DSEHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIVKEKSPDGL GG
Sbjct: 121 DSEHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIVKEKSPDGLHGG 180

Query: 181 AFYSLYTNEGKGRQDRKLAVARHRRRNGRSEYKIAQSARGILCNADDSFVGSMTTNLVGS 240
           AFYSLYTNEGKGRQDRKLAVARH RR GRSEYKIAQSARGILCNADDSFVGSMTTNLVGS
Sbjct: 181 AFYSLYTNEGKGRQDRKLAVARHGRRKGRSEYKIAQSARGILCNADDSFVGSMTTNLVGS 240

Query: 241 KYHIWDQASRLKPIPSQSKSLLAAVTFMPTITTWTGSHRSMKAFIPKHQTIQLKNTNQVQ 300
           KY+IWDQ SRLKPIP+QS+SLL AVTF PTITTWTGSHRSMKAFIPKHQ++QLKNTNQVQ
Sbjct: 241 KYYIWDQGSRLKPIPTQSRSLLGAVTFTPTITTWTGSHRSMKAFIPKHQSMQLKNTNQVQ 300

Query: 301 HIAGLPREWEEEKTKVHQLVSRVPQYNKISKQYELDFRDRGRAVSGLMIQTSVKNFQLTL 360
           HIAGLPREWEEEK KVHQLVS+VPQYNKISKQYELDFRDRGRAVSGL+IQTSVKNFQLTL
Sbjct: 301 HIAGLPREWEEEKAKVHQLVSKVPQYNKISKQYELDFRDRGRAVSGLVIQTSVKNFQLTL 360

Query: 361 EENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV 405
           EENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV
Sbjct: 361 EENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV 408

[Close]
BLAST of Cp4.1LG17g08610 vs. NCBI nr
Match: gi|778728871|ref|XP_011659490.1| (PREDICTED: tubby-like protein 8 isoform X1 [Cucumis sativus])

HSP 1 Score: 743.4 bits (1918), Expect = 2.1e-211
Identity = 371/409 (90.71%), Postives = 385/409 (94.13%), Query Frame = 1 

Query: 1   MSGDKKTIIQRQTSYNPLYVNPLTDLRHNRSCSDGG-FRQGKENLTPNTKEKQSDENG-- 60
           M GDKK+II RQ+SYN LY+NPLTDLRHNRSCSDGG FRQGKENLTPNTK+KQ DE    
Sbjct: 1   MIGDKKSIIPRQSSYNSLYLNPLTDLRHNRSCSDGGGFRQGKENLTPNTKDKQRDEPAPA 60

Query: 61  VLCDKENAIPINGSCANPKK-FGDFKSFSTGKALKPSSLHLCMQMNEPDKVFGSKLWEGT 120
           VLCDKEN IP NG CAN K+ FGDFKSFS GKALKPSSLHLCMQMNEPDKVF S+LW+GT
Sbjct: 61  VLCDKENVIPANGFCANSKQQFGDFKSFSNGKALKPSSLHLCMQMNEPDKVFASRLWDGT 120

Query: 121 DSEHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIVKEKSPDGLRGG 180
           DSEHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIVKEKSPDGL GG
Sbjct: 121 DSEHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIVKEKSPDGLHGG 180

Query: 181 AFYSLYTNEGKGRQDRKLAVARHRRRNGRSEYKIAQSARGILCNADDSFVGSMTTNLVGS 240
           AFYSLYTNEGKGRQDRKLAVARH RR GRSEYKIAQSARGILCNADDSFVGSMTTNLVGS
Sbjct: 181 AFYSLYTNEGKGRQDRKLAVARHGRRKGRSEYKIAQSARGILCNADDSFVGSMTTNLVGS 240

Query: 241 KYHIWDQASRLKPIPSQSKSLLAAVTFMPTITTWTGSHRSMKAFIPKHQTIQLKNTN-QV 300
           KY+IWDQ SRLKPIP+QS+SLL AVTF PTITTWTGSHRSMKAFIPKHQ++QLKNTN QV
Sbjct: 241 KYYIWDQGSRLKPIPTQSRSLLGAVTFTPTITTWTGSHRSMKAFIPKHQSMQLKNTNQQV 300

Query: 301 QHIAGLPREWEEEKTKVHQLVSRVPQYNKISKQYELDFRDRGRAVSGLMIQTSVKNFQLT 360
           QHIAGLPREWEEEK KVHQLVS+VPQYNKISKQYELDFRDRGRAVSGL+IQTSVKNFQLT
Sbjct: 301 QHIAGLPREWEEEKAKVHQLVSKVPQYNKISKQYELDFRDRGRAVSGLVIQTSVKNFQLT 360

Query: 361 LEENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV 405
           LEENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV
Sbjct: 361 LEENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV 409

[Close]
BLAST of Cp4.1LG17g08610 vs. NCBI nr
Match: gi|659122556|ref|XP_008461206.1| (PREDICTED: tubby-like protein 8 isoform X2 [Cucumis melo])

HSP 1 Score: 742.3 bits (1915), Expect = 4.6e-211
Identity = 366/406 (90.15%), Postives = 382/406 (94.09%), Query Frame = 1 

Query: 1   MSGDKKTIIQRQTSYNPLYVNPLTDLRHNRSCSDGG-FRQGKENLTPNTKEKQSDENGVL 60
           M GDKK+II RQ+SYN LY+NPLTDL HNRSCSDGG F+QGKENLTPNTK+KQ DE+ VL
Sbjct: 1   MIGDKKSIIPRQSSYNSLYLNPLTDLSHNRSCSDGGGFKQGKENLTPNTKDKQRDESAVL 60

Query: 61  CDKENAIPINGSCANPKK-FGDFKSFSTGKALKPSSLHLCMQMNEPDKVFGSKLWEGTDS 120
           CDKENAIPING CAN K+ FGD KSFSTGKALKPSSLHLCMQMNEPDKVF ++LW+GTDS
Sbjct: 61  CDKENAIPINGFCANSKQQFGDLKSFSTGKALKPSSLHLCMQMNEPDKVFATRLWDGTDS 120

Query: 121 EHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIVKEKSPDGLRGGAF 180
           EHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIVKEKSPDGL GGAF
Sbjct: 121 EHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIVKEKSPDGLHGGAF 180

Query: 181 YSLYTNEGKGRQDRKLAVARHRRRNGRSEYKIAQSARGILCNADDSFVGSMTTNLVGSKY 240
           YSLYTNEGKGRQDRKLAVARHRRR GRSEYKIAQS RG+LCNADDSFVGSMTTNLVGSKY
Sbjct: 181 YSLYTNEGKGRQDRKLAVARHRRRKGRSEYKIAQSTRGVLCNADDSFVGSMTTNLVGSKY 240

Query: 241 HIWDQASRLKPIPSQSKSLLAAVTFMPTITTWTGSHRSMKAFIPKHQTIQLKNTNQVQHI 300
           HIWDQ +RLKP     +SLL AVTFMPTITTWTGSHR MKAFIPKHQ++QLKNTNQVQHI
Sbjct: 241 HIWDQGNRLKP-----RSLLGAVTFMPTITTWTGSHRCMKAFIPKHQSMQLKNTNQVQHI 300

Query: 301 AGLPREWEEEKTKVHQLVSRVPQYNKISKQYELDFRDRGRAVSGLMIQTSVKNFQLTLEE 360
           AGLPREWEEEK KVHQLVS+VPQYNKISKQYELDFRDRGRAVSGLMIQTSVKNFQLTLEE
Sbjct: 301 AGLPREWEEEKAKVHQLVSKVPQYNKISKQYELDFRDRGRAVSGLMIQTSVKNFQLTLEE 360

Query: 361 NGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV 405
           NGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV
Sbjct: 361 NGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV 401

[Close]
BLAST of Cp4.1LG17g08610 vs. NCBI nr
Match: gi|659122554|ref|XP_008461205.1| (PREDICTED: tubby-like protein 8 isoform X1 [Cucumis melo])

HSP 1 Score: 737.6 bits (1903), Expect = 1.1e-209
Identity = 366/407 (89.93%), Postives = 382/407 (93.86%), Query Frame = 1 

Query: 1   MSGDKKTIIQRQTSYNPLYVNPLTDLRHNRSCSDGG-FRQGKENLTPNTKEKQSDENGVL 60
           M GDKK+II RQ+SYN LY+NPLTDL HNRSCSDGG F+QGKENLTPNTK+KQ DE+ VL
Sbjct: 1   MIGDKKSIIPRQSSYNSLYLNPLTDLSHNRSCSDGGGFKQGKENLTPNTKDKQRDESAVL 60

Query: 61  CDKENAIPINGSCANPKK-FGDFKSFSTGKALKPSSLHLCMQMNEPDKVFGSKLWEGTDS 120
           CDKENAIPING CAN K+ FGD KSFSTGKALKPSSLHLCMQMNEPDKVF ++LW+GTDS
Sbjct: 61  CDKENAIPINGFCANSKQQFGDLKSFSTGKALKPSSLHLCMQMNEPDKVFATRLWDGTDS 120

Query: 121 EHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIVKEKSPDGLRGGAF 180
           EHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIVKEKSPDGL GGAF
Sbjct: 121 EHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIVKEKSPDGLHGGAF 180

Query: 181 YSLYTNEGKGRQDRKLAVARHRRRNGRSEYKIAQSARGILCNADDSFVGSMTTNLVGSKY 240
           YSLYTNEGKGRQDRKLAVARHRRR GRSEYKIAQS RG+LCNADDSFVGSMTTNLVGSKY
Sbjct: 181 YSLYTNEGKGRQDRKLAVARHRRRKGRSEYKIAQSTRGVLCNADDSFVGSMTTNLVGSKY 240

Query: 241 HIWDQASRLKPIPSQSKSLLAAVTFMPTITTWTGSHRSMKAFIPKHQTIQLKNTN-QVQH 300
           HIWDQ +RLKP     +SLL AVTFMPTITTWTGSHR MKAFIPKHQ++QLKNTN QVQH
Sbjct: 241 HIWDQGNRLKP-----RSLLGAVTFMPTITTWTGSHRCMKAFIPKHQSMQLKNTNQQVQH 300

Query: 301 IAGLPREWEEEKTKVHQLVSRVPQYNKISKQYELDFRDRGRAVSGLMIQTSVKNFQLTLE 360
           IAGLPREWEEEK KVHQLVS+VPQYNKISKQYELDFRDRGRAVSGLMIQTSVKNFQLTLE
Sbjct: 301 IAGLPREWEEEKAKVHQLVSKVPQYNKISKQYELDFRDRGRAVSGLMIQTSVKNFQLTLE 360

Query: 361 ENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV 405
           ENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV
Sbjct: 361 ENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV 402

[Close]
BLAST of Cp4.1LG17g08610 vs. NCBI nr
Match: gi|645245376|ref|XP_008228851.1| (PREDICTED: tubby-like protein 8 [Prunus mume])

HSP 1 Score: 547.4 bits (1409), Expect = 2.2e-152
Identity = 290/427 (67.92%), Postives = 334/427 (78.22%), Query Frame = 1 

Query: 1   MSGDKKT-IIQRQTSYNPLYVNPLTDLRHNRSCSDGG---------------FRQGKENL 60
           MSG KKT +I RQ+SYN LYVNPLTD +HNRS S+G                    KEN 
Sbjct: 2   MSGCKKTTLIPRQSSYNSLYVNPLTDQKHNRSYSEGVSLNTKNHNLGPNPSILNHNKENA 61

Query: 61  TPNTKEKQSDENGVLCDKENAIPI-NGSC-ANPKKFGDFKSFSTG-KALKPSSLHLCMQM 120
            P  +E+ + +N    DKEN +   NGS    P K  + KS STG +ALKPSSL  CMQM
Sbjct: 62  MPYKQEQAALDN----DKENLVAQENGSSFLMPLKQKNLKSLSTGCRALKPSSLQFCMQM 121

Query: 121 NEPDKVF--GSKLWE--GTDSEHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDV 180
           NEP+KV   GS +W+     SE+SSSLKIWD+SDSEAAPASSWSTLPN+SLLCRPLP+DV
Sbjct: 122 NEPEKVLFGGSTIWDPPSNGSENSSSLKIWDYSDSEAAPASSWSTLPNKSLLCRPLPMDV 181

Query: 181 GRCTCVIVKEKSPDGLRGGAFYSLYTNEGKGRQDRKLAVARHRRRNGRSEYKIAQSARGI 240
           GRCTCVIVKE  P+GL GG  YSLYTNEGKGRQDRKLA+A H+RRNG+SE  IAQ+ +GI
Sbjct: 182 GRCTCVIVKEACPEGLDGGTLYSLYTNEGKGRQDRKLAIAHHKRRNGKSELTIAQNVKGI 241

Query: 241 LCNADDSFVGSMTTNLVGSKYHIWDQASRLKPIPSQSKSLLAAVTFMPTITTWTGSHRSM 300
           L ++DDSF+GS+  NL+GSKYHIWDQ S    +  QSKSLLA V+F PTI++WTGS+R +
Sbjct: 242 LSHSDDSFIGSVNANLMGSKYHIWDQGSCPNSLSRQSKSLLAVVSFTPTISSWTGSYRRL 301

Query: 301 KAFIPKHQTIQLKNTNQVQHIAGLPREWEEEKTKVHQLVSRVPQYNKISKQYELDFRDRG 360
           +A+I KHQ++QLKNT QVQHI GLP+EWEE+  KVHQL SRVP YNKISKQYELDFRDRG
Sbjct: 302 RAYIAKHQSMQLKNTTQVQHIKGLPKEWEEKLDKVHQLCSRVPNYNKISKQYELDFRDRG 361

Query: 361 RAVSGLMIQTSVKNFQLTLEENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASID 405
           RA  GL IQ+SVKNFQLTLEENGKQTILQLGR+GKSKYVMDYRYPLTGYQAFCICLASID
Sbjct: 362 RA--GLRIQSSVKNFQLTLEENGKQTILQLGRVGKSKYVMDYRYPLTGYQAFCICLASID 421

The following BLAST results are available for this feature:
BLAST of Cp4.1LG17g08610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TLP8_ARATH8.0e-12360.54Tubby-like protein 8 OS=Arabidopsis thaliana GN=TULP8 PE=2 SV=1[more]
TLP4_ORYSJ4.3e-10866.44Tubby-like protein 4 OS=Oryza sativa subsp. japonica GN=TULP4 PE=3 SV=2[more]
TUB_HUMAN4.8e-1928.46Tubby protein homolog OS=Homo sapiens GN=TUB PE=1 SV=1[more]
TUB_RAT1.1e-1828.46Tubby protein homolog OS=Rattus norvegicus GN=Tub PE=2 SV=1[more]
TUB_MOUSE1.1e-1828.46Tubby protein OS=Mus musculus GN=Tub PE=1 SV=1[more]
BLAST of Cp4.1LG17g08610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBM7_CUCSA1.4e-21190.71Uncharacterized protein OS=Cucumis sativus GN=Csa_7G431340 PE=3 SV=1[more]
A0A061GGL2_THECC8.3e-15162.53Tubby like protein 8 isoform 1 OS=Theobroma cacao GN=TCM_027570 PE=3 SV=1[more]
A0A0B0PJW6_GOSAR9.1e-15064.49Tubby-like protein 8 OS=Gossypium arboreum GN=F383_01489 PE=3 SV=1[more]
A0A059AIW9_EUCGR1.6e-14966.35Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03133 PE=3 SV=1[more]
A0A0D2TIG6_GOSRA2.2e-14864.01Uncharacterized protein OS=Gossypium raimondii GN=B456_009G121900 PE=3 SV=1[more]
BLAST of Cp4.1LG17g08610 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G16070.25.0e-12360.38 tubby like protein 8[more]
AT2G18280.15.1e-1138.14 tubby like protein 2[more]
AT2G47900.36.7e-1137.89 tubby like protein 3[more]
AT1G47270.11.1e-1022.63 tubby like protein 6[more]
AT1G25280.15.7e-1032.00 tubby like protein 10[more]
BLAST of Cp4.1LG17g08610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449436213|ref|XP_004135888.1|8.3e-21390.93PREDICTED: tubby-like protein 8 isoform X2 [Cucumis sativus][more]
gi|778728871|ref|XP_011659490.1|2.1e-21190.71PREDICTED: tubby-like protein 8 isoform X1 [Cucumis sativus][more]
gi|659122556|ref|XP_008461206.1|4.6e-21190.15PREDICTED: tubby-like protein 8 isoform X2 [Cucumis melo][more]
gi|659122554|ref|XP_008461205.1|1.1e-20989.93PREDICTED: tubby-like protein 8 isoform X1 [Cucumis melo][more]
gi|645245376|ref|XP_008228851.1|2.2e-15267.92PREDICTED: tubby-like protein 8 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025659Tubby-like_C
IPR000007Tubby_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0044424 intracellular part
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g08610.1Cp4.1LG17g08610.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000007Tubby, C-terminalPRINTSPR01573SUPERTUBBYcoord: 360..379
score: 5.5E-21coord: 381..403
score: 5.5E-21coord: 225..249
score: 5.5E-21coord: 340..356
score: 5.5
IPR000007Tubby, C-terminalGENE3DG3DSA:3.20.90.10coord: 146..397
score: 1.2
IPR000007Tubby, C-terminalPFAMPF01167Tubcoord: 160..397
score: 5.8
IPR025659Tubby C-terminal-like domainunknownSSF54518Tubby C-terminal domain-likecoord: 137..402
score: 1.28
NoneNo IPR availablePANTHERPTHR16517TUBBY-RELATEDcoord: 110..404
score: 5.9E
NoneNo IPR availablePANTHERPTHR16517:SF27TUBBY-LIKE PROTEIN 8coord: 110..404
score: 5.9E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG17g08610Cucsa.106080Cucumber (Gy14) v1cgycpeB0230
Cp4.1LG17g08610CmaCh08G005820Cucurbita maxima (Rimu)cmacpeB917
Cp4.1LG17g08610CmoCh08G005730Cucurbita moschata (Rifu)cmocpeB853
Cp4.1LG17g08610Cla015309Watermelon (97103) v1cpewmB312
Cp4.1LG17g08610Csa7G431340Cucumber (Chinese Long) v2cpecuB343
Cp4.1LG17g08610MELO3C023483Melon (DHL92) v3.5.1cpemeB299
Cp4.1LG17g08610ClCG09G003460Watermelon (Charleston Gray)cpewcgB280
Cp4.1LG17g08610CSPI07G19940Wild cucumber (PI 183967)cpecpiB344
Cp4.1LG17g08610Lsi02G026480Bottle gourd (USVL1VR-Ls)cpelsiB262
Cp4.1LG17g08610MELO3C023483.2Melon (DHL92) v3.6.1cpemedB347
Cp4.1LG17g08610CsaV3_7G031740Cucumber (Chinese Long) v3cpecucB0422
Cp4.1LG17g08610Bhi09G000448Wax gourdcpewgoB0414
Cp4.1LG17g08610CsGy7G018220Cucumber (Gy14) v2cgybcpeB931
Cp4.1LG17g08610Carg13494Silver-seed gourdcarcpeB0632
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG17g08610Melon (DHL92) v3.5.1cpemeB308
Cp4.1LG17g08610Silver-seed gourdcarcpeB0494
Cp4.1LG17g08610Silver-seed gourdcarcpeB1145
Cp4.1LG17g08610Cucurbita pepo (Zucchini)cpecpeB157
Cp4.1LG17g08610Cucurbita pepo (Zucchini)cpecpeB332
Cp4.1LG17g08610Cucurbita pepo (Zucchini)cpecpeB336
Cp4.1LG17g08610Cucurbita maxima (Rimu)cmacpeB269
Cp4.1LG17g08610Cucurbita maxima (Rimu)cmacpeB376
Cp4.1LG17g08610Cucurbita maxima (Rimu)cmacpeB472
Cp4.1LG17g08610Cucurbita moschata (Rifu)cmocpeB232
Cp4.1LG17g08610Cucurbita moschata (Rifu)cmocpeB339
Cp4.1LG17g08610Cucurbita moschata (Rifu)cmocpeB430
Cp4.1LG17g08610Wild cucumber (PI 183967)cpecpiB313
Cp4.1LG17g08610Cucumber (Chinese Long) v2cpecuB311
Cp4.1LG17g08610Bottle gourd (USVL1VR-Ls)cpelsiB266
Cp4.1LG17g08610Watermelon (Charleston Gray)cpewcgB290