Cp4.1LG17g07860 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG17g07860
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAutophagy-related protein
LocationCp4.1LG17 : 5753360 .. 5756411 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAAAGCCAAATCCTTCAAGAACGAGTTCTCCTATGGTATGAAACTTTTTTGGCTTAAAATTCAAGATGATTTTCGTTATTTTTCATCAATTTTTCTCTTAGTTTGATACTTTTGGAGATCCTTATTGAATCATGGCGTTGAATTTTTCGTAGTACAACGATCGGAGGAGTCGTTCGAAATCTTGATCAAGTATCCGGATCGAGTCCCCGTAAGTTGCCAAATTCTCACATTATGCGTTTCTTATTTGAGAAGATTCGTATTGTTGCATTTTGTTTAGAAATTATAGATGTTGGTGAATTTATGAATTTGGTGGAAATAGGTAACTCAGAAAGTCTGCAGGTGTCCAATCCTTAGGCGTTTATCTTTGTTTCCTCTTGGTTGAAGCGTTATCGTTATGATTTTTTTGTTTTTTTTCTTAGAGATTGTTCGCGCAATTTGTTATGGGGGATGCTTTTCAGATAAATTCTTTCAGGAAATGAAATGCTGAAGTTATCAGATGATTTTAGTCAATGTTTTCTTTGTTATCTAAGAACAAAATTGTTTCCGGATTTTTGTTCAACTCGTGGATAGAAGCTGATTGTTCTTTGTATCAAGCGATGCCAAGGCGATTTCAATTTTGGTAGGCTTGGACAGAGCTATAGAAGGAAGCAAATCACTATTTTTGTTCCTAAAAAACAATATCACTGAAGTTAATGTGCAGACTCAATTATGTGATGTTCTTATATTTTTGAGGTGTAAATGCTAGATTGCTGTTCTTCATTTCCTCCAAATCCATGAAAGTGATTTAATGGTTTTCCTTTTGATGTTCTTTTTGAGTATCATTGCAGGTAATTGTCGAGAGATATGAGAAATGTGAATTTCCTGAGATGGAAAAGAAGAAGTAAGTTCTTCCTGCATATCTAAGCTTCCTCAATGTTTCAGTTCTCCTAATTTCATGTACCTCTCTCTGAAAATCAATTGAATGGAAACAGACACCATCACCTTTGCATTACACTCTTAACATGTTTGTTCTTGTTAATGTTTGAGAAACCATTTTTGGGTGCTGGCTGTCGATCGTAAGCGTCGAAATCGTCGAATTTCAATGTTCCTCACAAAATTGTCGAAAAATTATCGATTGTGACTCACTTTTTTTTCAAACGGCCCAATCAGAGTTTCCAAATTAGGGTCTCGGTTTTAACCCTGTACGTATGGTGCTATAGGCTCTCTTTCTTCGAGATTGTTAATGTTTGTTCTTGTCTGTCTATCACATGATCATCCTCCCCAAAAAAAATAACATCATGGTATTTATTTATTTACACATTTGGAAATTAAAACATAGTCTCACATAGTGTCTTACACGTTGTATTCCATCGTTTTCTCGTCTCGTAAGATACGATTTTCATTGAATTTCTGCAGAACTATGGGATCTGAACAGGGGTTTTGTACATGTTGCCTAGGTTTACATTTGAAAGCCAGTTGTGATCCTAAAATAACATGACATATTGTGTCAATTAGTTTTGGTTTGTCTGTTGAATGTCTTTTGTTTTGTTATTGACTAAAGGTACCTCATTCCTCGAGACATGTCTGTTGGCCAATTCATCCATGTCCTGAGCACCAGGCTTCGNGTATTTATTTATTTACACATTTGGAAATTAAAACATAGTCTCAGATAGTGTCTTACATGTTGTATTCCATCGTTTTCTCATCTCGTAAGATACGATTTTCATTGAATTTCTAAATTAGGGTCTCGATTTTAACCCTGTACGTATGGTGCTATAGGCTCTCTTTCTTCGAGATTGTTAATGTTTGTTCTTGTCTGTCTTATTTTTCTGGCTATCTATCACATGATCATCCTCCCCAAAAAAAATAACATCATGGTATTTATTTATTTACACATTTGGAAATTAAAACATAGTCTCACATAGTGTCTTACACGTTGTATTCCATCGTTTTCTCGTCTCGTAAGATACGATTTTCATTGAATTTCTGCAGAACTATGGGATCTGAACAGGGGTTTTGTACATGTTGCCTAGGTTTACATTTGAAAGCCAGTTGTGATCCTAAAATAACATGACATATTGTGTCAATTAGTTTTGGTTTGTCTGTTGAATGTCTTTTGTTTTGTTATTGACTAAAGGTACCTCATTCCTCGAGACATGTCTGTTGGCCAATTCATCCATGTCCTGAGCACCAGGCTTCGTCTAGCACCTGGAAAAGCTCTCTTTGTATTTGTAAAGAATACTTTGCCTCAAACAGGTAGGGTTAGGACATAGGATTACATTTGAGCTGATGCTGCTGCCCATTTTTACGTGCATTCTCGTGCAACAAGTCGTTTTAATCCTAAACAATTGCCCTCAAATTTTGCAGCTAGCTTAATGAGTACCGTGTACNGCTCTCTTTCTTCGAGATTGTTAATGTTTGTTCTTGTCTGTCTTATTTTTCTGGCTATCTATCACATGATCATCCTCCCCAAAAAAAATAACATCATGGTATTTATTTATTTACACATTTGGAAATTAAAACATAGTCTCACATAGTGTCTTACACGTTGTATTCCATCGTTTTCTCGTCTCGTAAGATACGATTTTCATTGAATTTCTGCAGAACTATGGGATCTGAACAGGGGTTTTGTACATGTTGCCTAGGTTTACATTTGAAAGCCAGTTGTGATCCTAAAATAACATGACATATTGTGTCAATTAGTTTTGGTTTGTCTGTTGAATGTCTTTTGTTTTGTTATTGACTAAAGGTACCTCATTCCTCGAGACATGTCTGTTGGCCAATTCATCCATGTCCTGAGCACCAGGCTTCGTCTAGCACCTGGAAAAGCTCTCTTTGTATTTGTAAAGAATACTTTGCCTCAAACAGGTAGGGTTAGGACATAGGATTACATTTGAGCTGATGCTGCTGCCCATTTTTACGTGCATTCTCGTGCAACAAGTCGTTTTAATCCTAAACAATTGCCCTCAAATTTTGCAGCTAGCTTAATGAGTACCGTGTACGAATCATACAAGGACGACGATGGCTTTCTGTACATGTGTTACAGCAGTGAAAAGACCTTTGGCTAA

mRNA sequence

ATGGGTAAAGCCAAATCCTTCAAGAACGAGTTCTCCTATGTACAACGATCGGAGGAGTCGTTCGAAATCTTGATCAAGTATCCGGATCGAGTCCCCGTAATTGTCGAGAGATATGAGAAATGTGAATTTCCTGAGATGGAAAAGAAGAAGTACCTCATTCCTCGAGACATGTCTGTTGGCCAATTCATCCATGTCCTGAGCACCAGGCTTCGTCTAGCACCTGGAAAAGCTCTCTTTGTATTTGTAAAGAATACTTTGCCTCAAACAGGGGTTTTGTACATGTTGCCTAGGTACCTCATTCCTCGAGACATGTCTGTTGGCCAATTCATCCATGTCCTGAGCACCAGGCTTCGTCTAGCACCTGGAAAAGCTCTCTTTGTATTTGTAAAGAATACTTTGCCTCAAACAGCTAGCTTAATGAGTACCGTGTACGAATCATACAAGGACGACGATGGCTTTCTGTACATGTGTTACAGCAGTGAAAAGACCTTTGGCTAA

Coding sequence (CDS)

ATGGGTAAAGCCAAATCCTTCAAGAACGAGTTCTCCTATGTACAACGATCGGAGGAGTCGTTCGAAATCTTGATCAAGTATCCGGATCGAGTCCCCGTAATTGTCGAGAGATATGAGAAATGTGAATTTCCTGAGATGGAAAAGAAGAAGTACCTCATTCCTCGAGACATGTCTGTTGGCCAATTCATCCATGTCCTGAGCACCAGGCTTCGTCTAGCACCTGGAAAAGCTCTCTTTGTATTTGTAAAGAATACTTTGCCTCAAACAGGGGTTTTGTACATGTTGCCTAGGTACCTCATTCCTCGAGACATGTCTGTTGGCCAATTCATCCATGTCCTGAGCACCAGGCTTCGTCTAGCACCTGGAAAAGCTCTCTTTGTATTTGTAAAGAATACTTTGCCTCAAACAGCTAGCTTAATGAGTACCGTGTACGAATCATACAAGGACGACGATGGCTTTCTGTACATGTGTTACAGCAGTGAAAAGACCTTTGGCTAA

Protein sequence

MGKAKSFKNEFSYVQRSEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIHVLSTRLRLAPGKALFVFVKNTLPQTGVLYMLPRYLIPRDMSVGQFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG
Homology
[Close]
BLAST of Cp4.1LG17g07860 vs. Swiss-Prot
Match: ATG8I_ARATH (Autophagy-related protein 8i OS=Arabidopsis thaliana GN=ATG8I PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.0e-27
Identity = 56/69 (81.16%), Postives = 65/69 (94.20%), Query Frame = 1 

Query: 97  RYLIPRDMSVGQFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYM 156
           ++L+PRDMSVGQFI++LS RL L+PGKALFVFV NTLPQTA+LM +VYESYKDDDGF+YM
Sbjct: 47  KFLVPRDMSVGQFIYILSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYM 106

Query: 157 CYSSEKTFG 166
           CYSSEKTFG
Sbjct: 107 CYSSEKTFG 115

[Close]
BLAST of Cp4.1LG17g07860 vs. Swiss-Prot
Match: ATG8H_ARATH (Autophagy-related protein 8h OS=Arabidopsis thaliana GN=ATG8H PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.8e-25
Identity = 54/85 (63.53%), Postives = 69/85 (81.18%), Query Frame = 1 

Query: 5  KSFKNEFSYVQRSEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIH 64
          KSFK++FS  +R +ES  I+ KYPDR+PVI+E+Y   + P+MEK KYL+PRDM+VG FIH
Sbjct: 6  KSFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIH 65

Query: 65 VLSTRLRLAPGKALFVFVKNTLPQT 90
          +LS R++L P KALFVFV NTLPQT
Sbjct: 66 MLSKRMQLDPSKALFVFVHNTLPQT 90

[Close]
BLAST of Cp4.1LG17g07860 vs. Swiss-Prot
Match: ATG8D_ORYSJ (Autophagy-related protein 8D OS=Oryza sativa subsp. japonica GN=ATG8D PE=3 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 5.0e-23
Identity = 51/90 (56.67%), Postives = 68/90 (75.56%), Query Frame = 1 

Query: 3  KAKSFKNEFSYVQRSEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQF 62
          K + FK EF+  +R++ES  ++  YPDR+PVIVE++ +   PEMEK+KYL+P +M VGQF
Sbjct: 2  KPRPFKEEFTLEERAKESAAMIASYPDRIPVIVEKFSRSNLPEMEKRKYLVPCNMPVGQF 61

Query: 63 IHVLSTRLRLAPGKALFVFVKNTLPQTGVL 93
          I +L +RL L+PG ALFVFV NTLPQT  L
Sbjct: 62 IFILRSRLHLSPGTALFVFVNNTLPQTAQL 91

[Close]
BLAST of Cp4.1LG17g07860 vs. Swiss-Prot
Match: ATG8A_ORYSI (Autophagy-related protein 8A OS=Oryza sativa subsp. indica GN=ATG8A PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 6.1e-21
Identity = 45/69 (65.22%), Postives = 58/69 (84.06%), Query Frame = 1 

Query: 97  RYLIPRDMSVGQFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYM 156
           +YL+P D++VGQF++V+  R++L+P KA+FVFVKNTLP TASLMS +YE  KD+DGFLYM
Sbjct: 49  KYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYM 108

Query: 157 CYSSEKTFG 166
            YS E TFG
Sbjct: 109 TYSGENTFG 117

[Close]
BLAST of Cp4.1LG17g07860 vs. Swiss-Prot
Match: ATG8A_ORYSJ (Autophagy-related protein 8A OS=Oryza sativa subsp. japonica GN=ATG8A PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 6.1e-21
Identity = 45/69 (65.22%), Postives = 58/69 (84.06%), Query Frame = 1 

Query: 97  RYLIPRDMSVGQFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYM 156
           +YL+P D++VGQF++V+  R++L+P KA+FVFVKNTLP TASLMS +YE  KD+DGFLYM
Sbjct: 49  KYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYM 108

Query: 157 CYSSEKTFG 166
            YS E TFG
Sbjct: 109 TYSGENTFG 117

[Close]
BLAST of Cp4.1LG17g07860 vs. TrEMBL
Match: A0A0A0K6G3_CUCSA (Autophagy-related protein OS=Cucumis sativus GN=Csa_7G419640 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.0e-34
Identity = 75/92 (81.52%), Postives = 81/92 (88.04%), Query Frame = 1 

Query: 1  MGKAKSFKNEFSYVQRSEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
          MG+ KSFK+EF++ QR  ESFE+L KYPDR+PVIVERY KCE PEMEKKKYLIPRDMSVG
Sbjct: 1  MGRTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVG 60

Query: 61 QFIHVLSTRLRLAPGKALFVFVKNTLPQTGVL 93
          QFIHVLSTRL LAPGKALFVFV NTLPQT  L
Sbjct: 61 QFIHVLSTRLHLAPGKALFVFVNNTLPQTASL 92

[Close]
BLAST of Cp4.1LG17g07860 vs. TrEMBL
Match: B9RN69_RICCO (Autophagy-related protein OS=Ricinus communis GN=RCOM_1344100 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.2e-32
Identity = 71/92 (77.17%), Postives = 81/92 (88.04%), Query Frame = 1 

Query: 1  MGKAKSFKNEFSYVQRSEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
          MGK  SFKNEF++ QR EES +I+ KYPDRVPVIVERY K + PE+EKKKYL+PRDMSVG
Sbjct: 1  MGKTSSFKNEFTFEQRLEESNDIIAKYPDRVPVIVERYCKTDLPELEKKKYLVPRDMSVG 60

Query: 61 QFIHVLSTRLRLAPGKALFVFVKNTLPQTGVL 93
          QFIHVLS+RLR+APGKALFVFV+NTLPQT  L
Sbjct: 61 QFIHVLSSRLRMAPGKALFVFVENTLPQTATL 92

[Close]
BLAST of Cp4.1LG17g07860 vs. TrEMBL
Match: A0A0D2QR76_GOSRA (Autophagy-related protein OS=Gossypium raimondii GN=B456_007G119300 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.2e-31
Identity = 70/92 (76.09%), Postives = 80/92 (86.96%), Query Frame = 1 

Query: 1  MGKAKSFKNEFSYVQRSEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
          MGK  SFK+EF++ QR EES +I+ KYP+RVPVIVERY K + PEMEKKKYL+PRDMSVG
Sbjct: 1  MGKIPSFKDEFTFDQRLEESRDIIAKYPNRVPVIVERYSKADLPEMEKKKYLVPRDMSVG 60

Query: 61 QFIHVLSTRLRLAPGKALFVFVKNTLPQTGVL 93
          QFIH+LS RLRL+PGKALFVFVKNTLPQT  L
Sbjct: 61 QFIHILSLRLRLSPGKALFVFVKNTLPQTATL 92

[Close]
BLAST of Cp4.1LG17g07860 vs. TrEMBL
Match: A0A067K7T1_JATCU (Autophagy-related protein OS=Jatropha curcas GN=JCGZ_14091 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.5e-31
Identity = 69/92 (75.00%), Postives = 80/92 (86.96%), Query Frame = 1 

Query: 1  MGKAKSFKNEFSYVQRSEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
          MGK+ SFK+EF++ +R EES +I+ KYP+RVPVIVERY K + PEMEKKKYL+PRDMSVG
Sbjct: 1  MGKSNSFKDEFTFEERLEESRDIISKYPNRVPVIVERYSKTDLPEMEKKKYLVPRDMSVG 60

Query: 61 QFIHVLSTRLRLAPGKALFVFVKNTLPQTGVL 93
          QFIHVLS+RL L PGKALFVFVKNTLPQT  L
Sbjct: 61 QFIHVLSSRLHLTPGKALFVFVKNTLPQTATL 92

[Close]
BLAST of Cp4.1LG17g07860 vs. TrEMBL
Match: A0A067H4R6_CITSI (Autophagy-related protein OS=Citrus sinensis GN=CISIN_1g033214mg PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.3e-30
Identity = 67/92 (72.83%), Postives = 79/92 (85.87%), Query Frame = 1 

Query: 1  MGKAKSFKNEFSYVQRSEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
          MGK +SFK+EF++ QR EES EI+ KYPDRVPVI ERY K + P+MEKKK+L+PRDMSVG
Sbjct: 1  MGKMQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVG 60

Query: 61 QFIHVLSTRLRLAPGKALFVFVKNTLPQTGVL 93
          QFIH+LS+RL L PGKALFVFVK+TLPQT  L
Sbjct: 61 QFIHILSSRLHLTPGKALFVFVKDTLPQTATL 92

[Close]
BLAST of Cp4.1LG17g07860 vs. TAIR10
Match: AT3G15580.1 (AT3G15580.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 123.6 bits (309), Expect = 1.1e-28
Identity = 56/69 (81.16%), Postives = 65/69 (94.20%), Query Frame = 1 

Query: 97  RYLIPRDMSVGQFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYM 156
           ++L+PRDMSVGQFI++LS RL L+PGKALFVFV NTLPQTA+LM +VYESYKDDDGF+YM
Sbjct: 47  KFLVPRDMSVGQFIYILSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYM 106

Query: 157 CYSSEKTFG 166
           CYSSEKTFG
Sbjct: 107 CYSSEKTFG 115

[Close]
BLAST of Cp4.1LG17g07860 vs. TAIR10
Match: AT3G06420.1 (AT3G06420.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 117.1 bits (292), Expect = 1.0e-26
Identity = 54/85 (63.53%), Postives = 69/85 (81.18%), Query Frame = 1 

Query: 5  KSFKNEFSYVQRSEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIH 64
          KSFK++FS  +R +ES  I+ KYPDR+PVI+E+Y   + P+MEK KYL+PRDM+VG FIH
Sbjct: 6  KSFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIH 65

Query: 65 VLSTRLRLAPGKALFVFVKNTLPQT 90
          +LS R++L P KALFVFV NTLPQT
Sbjct: 66 MLSKRMQLDPSKALFVFVHNTLPQT 90

[Close]
BLAST of Cp4.1LG17g07860 vs. TAIR10
Match: AT4G21980.2 (AT4G21980.2 Ubiquitin-like superfamily protein)

HSP 1 Score: 99.0 bits (245), Expect = 2.9e-21
Identity = 43/69 (62.32%), Postives = 57/69 (82.61%), Query Frame = 1 

Query: 97  RYLIPRDMSVGQFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYM 156
           +YL+P D++VGQF++V+  R++L   KA+FVFVKNTLP TA+LMS +YE +KD+DGFLYM
Sbjct: 64  KYLVPADLTVGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYM 123

Query: 157 CYSSEKTFG 166
            YS E TFG
Sbjct: 124 TYSGENTFG 132

[Close]
BLAST of Cp4.1LG17g07860 vs. TAIR10
Match: AT2G05630.2 (AT2G05630.2 Ubiquitin-like superfamily protein)

HSP 1 Score: 99.0 bits (245), Expect = 2.9e-21
Identity = 41/69 (59.42%), Postives = 58/69 (84.06%), Query Frame = 1 

Query: 97  RYLIPRDMSVGQFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYM 156
           +YL+P D++VGQF++V+  R++L+P KA+F+FVKN LP TA++MS +YE +KD+DGFLYM
Sbjct: 93  KYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYM 152

Query: 157 CYSSEKTFG 166
            YS E TFG
Sbjct: 153 SYSGENTFG 161

[Close]
BLAST of Cp4.1LG17g07860 vs. TAIR10
Match: AT4G04620.1 (AT4G04620.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 98.6 bits (244), Expect = 3.8e-21
Identity = 53/122 (43.44%), Postives = 77/122 (63.11%), Query Frame = 1 

Query: 46  MEKKKYLI--PRDMSVGQFIHVLSTRLRLAPGKALFVFVKNTLPQTGVLYMLPRYLIPRD 105
           MEK  + +  P +M + +     STR+R    + + V V+             +YL+P D
Sbjct: 1   MEKNSFKLSNPLEMRMAE-----STRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPAD 60

Query: 106 MSVGQFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKT 165
           +++GQF++V+  R++L   KA+FVFVKNTLP TA+LMS +YE +KD+DGFLYM YS E T
Sbjct: 61  LTIGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENT 117

[Close]
BLAST of Cp4.1LG17g07860 vs. NCBI nr
Match: gi|659122904|ref|XP_008461385.1| (PREDICTED: autophagy-related protein 8i-like [Cucumis melo])

HSP 1 Score: 157.5 bits (397), Expect = 2.0e-35
Identity = 78/92 (84.78%), Postives = 82/92 (89.13%), Query Frame = 1 

Query: 1  MGKAKSFKNEFSYVQRSEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
          MG+ KSFK+EF+Y QR EESFE+L KYPDRVPVIVERY KC  PEMEKKKYLIPRDMSVG
Sbjct: 1  MGRTKSFKDEFTYEQRFEESFEVLAKYPDRVPVIVERYGKCGLPEMEKKKYLIPRDMSVG 60

Query: 61 QFIHVLSTRLRLAPGKALFVFVKNTLPQTGVL 93
          QFIHVLSTRLRLAPGKALFVFV NTLPQT  L
Sbjct: 61 QFIHVLSTRLRLAPGKALFVFVNNTLPQTASL 92

[Close]
BLAST of Cp4.1LG17g07860 vs. NCBI nr
Match: gi|645243036|ref|XP_008227798.1| (PREDICTED: autophagy-related protein 8i-like isoform X1 [Prunus mume])

HSP 1 Score: 153.7 bits (387), Expect = 2.8e-34
Identity = 92/170 (54.12%), Postives = 116/170 (68.24%), Query Frame = 1 

Query: 1   MGKAKSFKNEFSYVQRSEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MG+ KSFK+EF++ QR EES +I  KYPDRVPV  E Y    + +++ K+ L     S+ 
Sbjct: 1   MGRTKSFKDEFTFEQRVEESQDIKAKYPDRVPVTTEDYV---WLKLKGKEMLWDHSYSL- 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTGVLYMLP-----RYLIPRDMSVGQFIHVLST 120
               +L+ R        L+V V   L +      LP     +YL+PRDMSVGQFI+VLS+
Sbjct: 61  ----LLTIRF-------LWVMVSQVLVEKYSRTDLPQMEKKKYLVPRDMSVGQFIYVLSS 120

Query: 121 RLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 166
           RL LA GKALFVFVK+TLPQTASLM +VYES+KD+DGFLYMCYS+EKTFG
Sbjct: 121 RLHLAHGKALFVFVKDTLPQTASLMDSVYESFKDEDGFLYMCYSTEKTFG 155

[Close]
BLAST of Cp4.1LG17g07860 vs. NCBI nr
Match: gi|449436361|ref|XP_004135961.1| (PREDICTED: autophagy-related protein 8i [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 2.8e-34
Identity = 75/92 (81.52%), Postives = 81/92 (88.04%), Query Frame = 1 

Query: 1  MGKAKSFKNEFSYVQRSEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
          MG+ KSFK+EF++ QR  ESFE+L KYPDR+PVIVERY KCE PEMEKKKYLIPRDMSVG
Sbjct: 1  MGRTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVG 60

Query: 61 QFIHVLSTRLRLAPGKALFVFVKNTLPQTGVL 93
          QFIHVLSTRL LAPGKALFVFV NTLPQT  L
Sbjct: 61 QFIHVLSTRLHLAPGKALFVFVNNTLPQTASL 92

[Close]
BLAST of Cp4.1LG17g07860 vs. NCBI nr
Match: gi|255548303|ref|XP_002515208.1| (PREDICTED: autophagy-related protein 8i [Ricinus communis])

HSP 1 Score: 146.4 bits (368), Expect = 4.5e-32
Identity = 71/92 (77.17%), Postives = 81/92 (88.04%), Query Frame = 1 

Query: 1  MGKAKSFKNEFSYVQRSEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
          MGK  SFKNEF++ QR EES +I+ KYPDRVPVIVERY K + PE+EKKKYL+PRDMSVG
Sbjct: 1  MGKTSSFKNEFTFEQRLEESNDIIAKYPDRVPVIVERYCKTDLPELEKKKYLVPRDMSVG 60

Query: 61 QFIHVLSTRLRLAPGKALFVFVKNTLPQTGVL 93
          QFIHVLS+RLR+APGKALFVFV+NTLPQT  L
Sbjct: 61 QFIHVLSSRLRMAPGKALFVFVENTLPQTATL 92

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BLAST of Cp4.1LG17g07860 vs. NCBI nr
Match: gi|1012235073|ref|XP_015939431.1| (PREDICTED: autophagy-related protein 8i-like [Arachis duranensis])

HSP 1 Score: 145.2 bits (365), Expect = 1.0e-31
Identity = 68/92 (73.91%), Postives = 81/92 (88.04%), Query Frame = 1 

Query: 1  MGKAKSFKNEFSYVQRSEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
          MG + SFK+EF++VQR EES +I+ KYPDRVPVIVERY KC+ P++EKKKYL+PRD+SVG
Sbjct: 1  MGGSSSFKDEFTFVQRLEESRDIIAKYPDRVPVIVERYAKCDLPQLEKKKYLVPRDLSVG 60

Query: 61 QFIHVLSTRLRLAPGKALFVFVKNTLPQTGVL 93
           FIH+LS+RLRL PGKALFVFVKNTLPQT  L
Sbjct: 61 HFIHILSSRLRLPPGKALFVFVKNTLPQTATL 92

The following BLAST results are available for this feature:
BLAST of Cp4.1LG17g07860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATG8I_ARATH2.0e-2781.16Autophagy-related protein 8i OS=Arabidopsis thaliana GN=ATG8I PE=1 SV=1[more]
ATG8H_ARATH1.8e-2563.53Autophagy-related protein 8h OS=Arabidopsis thaliana GN=ATG8H PE=1 SV=1[more]
ATG8D_ORYSJ5.0e-2356.67Autophagy-related protein 8D OS=Oryza sativa subsp. japonica GN=ATG8D PE=3 SV=2[more]
ATG8A_ORYSI6.1e-2165.22Autophagy-related protein 8A OS=Oryza sativa subsp. indica GN=ATG8A PE=1 SV=1[more]
ATG8A_ORYSJ6.1e-2165.22Autophagy-related protein 8A OS=Oryza sativa subsp. japonica GN=ATG8A PE=3 SV=1[more]
BLAST of Cp4.1LG17g07860 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6G3_CUCSA2.0e-3481.52Autophagy-related protein OS=Cucumis sativus GN=Csa_7G419640 PE=3 SV=1[more]
B9RN69_RICCO3.2e-3277.17Autophagy-related protein OS=Ricinus communis GN=RCOM_1344100 PE=3 SV=1[more]
A0A0D2QR76_GOSRA1.2e-3176.09Autophagy-related protein OS=Gossypium raimondii GN=B456_007G119300 PE=3 SV=1[more]
A0A067K7T1_JATCU3.5e-3175.00Autophagy-related protein OS=Jatropha curcas GN=JCGZ_14091 PE=3 SV=1[more]
A0A067H4R6_CITSI1.3e-3072.83Autophagy-related protein OS=Citrus sinensis GN=CISIN_1g033214mg PE=3 SV=1[more]
BLAST of Cp4.1LG17g07860 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15580.11.1e-2881.16 Ubiquitin-like superfamily protein[more]
AT3G06420.11.0e-2663.53 Ubiquitin-like superfamily protein[more]
AT4G21980.22.9e-2162.32 Ubiquitin-like superfamily protein[more]
AT2G05630.22.9e-2159.42 Ubiquitin-like superfamily protein[more]
AT4G04620.13.8e-2143.44 Ubiquitin-like superfamily protein[more]
BLAST of Cp4.1LG17g07860 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659122904|ref|XP_008461385.1|2.0e-3584.78PREDICTED: autophagy-related protein 8i-like [Cucumis melo][more]
gi|645243036|ref|XP_008227798.1|2.8e-3454.12PREDICTED: autophagy-related protein 8i-like isoform X1 [Prunus mume][more]
gi|449436361|ref|XP_004135961.1|2.8e-3481.52PREDICTED: autophagy-related protein 8i [Cucumis sativus][more]
gi|255548303|ref|XP_002515208.1|4.5e-3277.17PREDICTED: autophagy-related protein 8i [Ricinus communis][more]
gi|1012235073|ref|XP_015939431.1|1.0e-3173.91PREDICTED: autophagy-related protein 8i-like [Arachis duranensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004241Atg8-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006914 autophagy
biological_process GO:0046482 para-aminobenzoic acid metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g07860.1Cp4.1LG17g07860.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004241Autophagy protein Atg8 ubiquitin-likePANTHERPTHR10969MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATEDcoord: 1..70
score: 1.2E-68coord: 118..165
score: 1.2
IPR004241Autophagy protein Atg8 ubiquitin-likePFAMPF02991Atg8coord: 15..90
score: 1.8E-27coord: 97..165
score: 3.1
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 97..165
score: 1.5E-27coord: 3..90
score: 6.7
NoneNo IPR availablePANTHERPTHR10969:SF25AUTOPHAGY-RELATED PROTEIN 8Icoord: 1..70
score: 1.2E-68coord: 118..165
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG17g07860Cucsa.128400Cucumber (Gy14) v1cgycpeB0335
Cp4.1LG17g07860CmaCh17G009970Cucurbita maxima (Rimu)cmacpeB376
Cp4.1LG17g07860CmaCh08G004930Cucurbita maxima (Rimu)cmacpeB917
Cp4.1LG17g07860CmoCh08G004870Cucurbita moschata (Rifu)cmocpeB853
Cp4.1LG17g07860CmoCh17G009720Cucurbita moschata (Rifu)cmocpeB339
Cp4.1LG17g07860Cla015189Watermelon (97103) v1cpewmB311
Cp4.1LG17g07860Csa7G419640Cucumber (Chinese Long) v2cpecuB343
Cp4.1LG17g07860MELO3C023607Melon (DHL92) v3.5.1cpemeB299
Cp4.1LG17g07860ClCG09G004650Watermelon (Charleston Gray)cpewcgB280
Cp4.1LG17g07860CSPI07G18660Wild cucumber (PI 183967)cpecpiB344
Cp4.1LG17g07860Lsi02G025200Bottle gourd (USVL1VR-Ls)cpelsiB262
Cp4.1LG17g07860MELO3C023607.2Melon (DHL92) v3.6.1cpemedB347
Cp4.1LG17g07860CsaV3_7G030480Cucumber (Chinese Long) v3cpecucB0422
Cp4.1LG17g07860Bhi09G000616Wax gourdcpewgoB0414
Cp4.1LG17g07860CsGy7G017110Cucumber (Gy14) v2cgybcpeB931
Cp4.1LG17g07860Carg13407Silver-seed gourdcarcpeB0632
Cp4.1LG17g07860Carg07089Silver-seed gourdcarcpeB0161
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG17g07860Cp4.1LG12g06460Cucurbita pepo (Zucchini)cpecpeB157
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG17g07860Bottle gourd (USVL1VR-Ls)cpelsiB266
Cp4.1LG17g07860Watermelon (Charleston Gray)cpewcgB290
Cp4.1LG17g07860Watermelon (97103) v1cpewmB322
Cp4.1LG17g07860Silver-seed gourdcarcpeB1071
Cp4.1LG17g07860Silver-seed gourdcarcpeB1145
Cp4.1LG17g07860Cucurbita pepo (Zucchini)cpecpeB332
Cp4.1LG17g07860Cucurbita pepo (Zucchini)cpecpeB336
Cp4.1LG17g07860Cucurbita maxima (Rimu)cmacpeB269
Cp4.1LG17g07860Cucurbita maxima (Rimu)cmacpeB472
Cp4.1LG17g07860Cucurbita moschata (Rifu)cmocpeB232
Cp4.1LG17g07860Cucurbita moschata (Rifu)cmocpeB430