Cp4.1LG17g07680 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG17g07680
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMyb transcription factor
LocationCp4.1LG17 : 5790480 .. 5794064 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGTCCGGAAAGGCCCTTGGACGGCGGAGGAGGATTCCATTCTCTTCAATTACGTTAATTCCCACGGCGAAGGCCGCTGGAACACCGCCGCTCGCTCCGCCGGTCCGTGTCTCTGATCCTTCCCCCTCGTCGGAGTTCCGACAAAGAATTTGCTGACTTTTTTTTTTTTGTTGTTTTGTTGTAGGTTTGAAGCGAAGCGGTAAAAGTTGTAGATTGAGATGGCTAAATTACTTGAGGCCGAGTGTTAAGCGTGGGAATATCACCCTCCAAGAACAGCTATTGATTCTTGATCTTCATTTTCAATTGGGTAACAGGTGGGTGATCCAAGTTTTGAAATTTATACTCTTTTTCTTCATTTGGGTGTTGGTTAAAAATGGAGTTTCTTAATAACCCATATCAAAAAATGGAGTTTTCTTAATAGCCCACGTAAAAAAATGGTTTTTTCTTAATAATCGGGTATAGTTTTCTGTGTTAGATGAACACAACTCTCCACAGTGGTATGATAATGTCCACTTTGAGTATAAGTTCTCATGGATTTGCTTTATGCTTCCCCATAAGATCTCGTACCAATGGAGAGAGTATTCAGTGATTATAAACTCACGATCATTCCCTAAAAAACAGAGGTGGGACTTTCATCATCCAACTGTTATTCTTAATAACCCACATTAAAAAAAAGGATTTTTCTTAATAACCCACATAAAAAGTGGAGTTTTCTTAATAACCCACATAAAAAAATGGAGTTTTCTTAATAACCCACATGAAAAATGGAGTTTTCTTTGATAACCCACATAAAAAATGAAGTGTTTTTTTTAATGAAGAATGCTTTCTTATTGGGTCAAGAAGGGAACTTTCATTGTTTTTTTTAATAAGTAAAGTGGAGAAAAAGTGATGGGTTTGGAATTGGAATAGGTGGTCCAAAATAGCACGGTATTTACCGGGAAGAACAGATAACGAGATAAAAAATTATTGGAGAACGAGAGTTCAAAAGCAAGCCAGACAACTCAAATATGACGTGAATAGTAAGGAATTTCGAGACACCATGCGATACGTATGGATGCCTCGTTTGCTCGAACGAATCCAAGCCTCAAACGACTCAGTTTCTGCCATTGCCATTGCCATTGACTCCGATGTCGTTCAACCACCACAATCACATCTTGACCCAACCCACTCATCACCTTCCAAGTCTAGTTGGGTCAACTCTCATGTGGCTTCTACAACTTCTATATCAAATTCAATATCCGACGAGGTTGTTAAATCACATCTCATCTCTAAAAGAACTAGTAAATGATACATTACAATATAAAACTTAATCATTTATGTATGTTCAAACACAGGTCCAACTTCAAGTTTCGCCTGTTTCAAACGTAGTTGAGAACGATACAAGCGAGAAGGACGAGATGGTCGTGCTAACAGATCAAGGCTACGACGGGGATACGATGAACGAATTGATAGGTTGGGAAGAGTCATTGGAGAATGGGTTATGGAATGAAGAAGACATGTGGTTCTTGCAGCAACAATTTAGTGATGATGTTTAAAAAGTCAAGATTAGAACCCCAATTTGATTACGTGACTCCGAATTCCAATTAGGGTTAATTTCCAAATGAATCAAAAGATGCGAATTGATTTTGAGTAGCTTTCTCGAGACCCAATAGATTTACTTGAAGAGAATCTTTTCTATGATCGGGTTTGACCATGATTAATTTAAATAGTAAATTAAGTGAAAACCCGATTACTTTAATTAAAATTTTTATTAAAAAATGGTTATATAACCCTAATTTCTTAAGAAATATTAATCTTTTGATGTAACGATGAATGATGAATTTAAAATCTTTGTATCACCCGAGTAAAGCAGGAGTACATGAATAAACAAACATCAATACTACGAACCTTCCTTTTCAGTGGCTCGATAATAAAAATTTCGAGTTAATCGTGCTTAACTCAAAGCAGTTTTAAGTTGAATGACCTCTAAGAAATCTTTCTAGAAAGGATATGACGATAAAACATTTTGAAAGTACCCATATTGATTTGTCGAGATAGTATTCATTCTTACGAGTATTTCAAGACAAATAGATAATGAAATGACTCGTGTTAGTTTACAAGGATAATTGATATGAACCAAGAGACATCAATTTATCCCACCAAATTTGAGCATATTATTTGAATTGAGCAATGCATAACAGTACCTTCTTTTCATCTCTAAAATTACGACAGTTGAACACCGACACCACCGTTTTCTCTCATTCAAGGTACTCCTCTGGATCGGTTTTGCCATAAAACTTGGAAAGTTTTAATTTGATGCTCCCCACGTTACGATCAATTCTATCATCATAAGGAACTCGTTGTAAATTATGATACCTTCTTCCATGGTCTCTCCCTCGCATCAAGCCATGACCAACCGCATGTAGATTATCCTCGTGGTGATCAGAATTGTCGCTCTCATATGTATCGGTTGAGGGCGTAGGTAGTGGAATCCTCTGTCGAGCTTGATTTTGAATCTCCAATCTTCCTATTCGATCAGTCAACTCTTCTATTCCTCGAATTAGTCTTTCCATGGTTCATTGTTGTGCTTCTCTCAATCGTGCATTAGTAATGTCAGTATTGTCGTATGGATTTTCCATGCTACAAAAGAAAGGTAAAAGAAAAAAAAAAAATCAAATTGAGAAGAAACGCAATGGAAACATATATCCGATCTTGAGCTTTTAGCTCTGATACCAAAATAATAAGATAAGGAATCAATACAAGGGGAATAAGATTCAGATTACCTCATTGATCGAATATCTCAAGGCAAGAACATTGTTTGAGATTCGAATCACTCCACAAGCAAGATCGATCATGTCTAGCTTGAATGATTCTTGTTTATCAAATATCTAAGGCAAGAATGTGAAGAAAATATTATATGATTGATGTCTCTTGGTTCATATCAACAGTATAACAGCTCATGCCCATCGCGAGTAGATATGAAACCGTGAGGCCGATGATGATACGTAATGGGCCAAAGTGAATAATATTTAGTAGCGGTGAGCTTGAACCGTTACATGGTAAACCAAACGAGTCAACTTTGGGGTTTGGTTGCCACGAAATGCCGCAATGTTTGAAACCAACTCATATTAAGGTGAATATATAATATTAAGGTAATGGAAATTGTGGTTCCAAGCCTTTGAAAATATTGGCCTTTTCTAATGCTTTACTTTCTAGATTATATAATGGAACCCATAATAATTATCTTTGTAGACTCCATTTTCTAATATATTTTATTTTCCATGCAAATGAAGAAATNTCAATATCCGACGAGGTTGTTAAATCACATCTCATCTCTAAAAGAACTAGTAAATGATACATTACAATATAAAACTTAATCATTTATGTATGTTCAAACACAGGTCCAACTTCAAGTTTCGCCTGTTTCAAACGTAGTTGAGAACGATACAAGCGAGAAGGACGAGATGGTCGTGCTAACAGATCAAGGCTACGACGGGGATACGATGAACGAATTGATAGGTTGGGAAGAGTCATTGGAGAATGGGTTATGGAATGAAGAAGACATGTGGTTCTTGCAGCAACAATTTAGTGATGATGTTTAA

mRNA sequence

ATGGACGTCCGGAAAGGCCCTTGGACGGCGGAGGAGGATTCCATTCTCTTCAATTACGTTAATTCCCACGGCGAAGGCCGCTGGAACACCGCCGCTCGCTCCGCCGGTTTGAAGCGAAGCGGTAAAAGTTGTAGATTGAGATGGCTAAATTACTTGAGGCCGAGTGTTAAGCGTGGGAATATCACCCTCCAAGAACAGCTATTGATTCTTGATCTTCATTTTCAATTGGTTTCTGCCATTGCCATTGCCATTGACTCCGATGTCGTTCAACCACCACAATCACATCTTGACCCAACCCACTCATCACCTTCCAAGTCTAGTTGGGTCAACTCTCATGTGGCTTCTACAACTTCTATATCAAATTCAATATCCGACGAGGTCCAACTTCAAGTTTCGCCTGTTTCAAACGTAGTTGAGAACGATACAAGCGAGAAGGACGAGATGGTCGTGCTAACAGATCAAGGCTACGACGGGGATACGATGAACGAATTGATAGGTTGGGAAGAGTCATTGGAGAATGGGTTATGGAATGAAGAAGACATGTGGTTCTTGCAGCAACAATTTAGTGATGATGTCCAACTTCAAGTTTCGCCTGTTTCAAACGTAGTTGAGAACGATACAAGCGAGAAGGACGAGATGGTCGTGCTAACAGATCAAGGCTACGACGGGGATACGATGAACGAATTGATAGGTTGGGAAGAGTCATTGGAGAATGGGTTATGGAATGAAGAAGACATGTGGTTCTTGCAGCAACAATTTAGTGATGATGTTTAA

Coding sequence (CDS)

ATGGACGTCCGGAAAGGCCCTTGGACGGCGGAGGAGGATTCCATTCTCTTCAATTACGTTAATTCCCACGGCGAAGGCCGCTGGAACACCGCCGCTCGCTCCGCCGGTTTGAAGCGAAGCGGTAAAAGTTGTAGATTGAGATGGCTAAATTACTTGAGGCCGAGTGTTAAGCGTGGGAATATCACCCTCCAAGAACAGCTATTGATTCTTGATCTTCATTTTCAATTGGTTTCTGCCATTGCCATTGCCATTGACTCCGATGTCGTTCAACCACCACAATCACATCTTGACCCAACCCACTCATCACCTTCCAAGTCTAGTTGGGTCAACTCTCATGTGGCTTCTACAACTTCTATATCAAATTCAATATCCGACGAGGTCCAACTTCAAGTTTCGCCTGTTTCAAACGTAGTTGAGAACGATACAAGCGAGAAGGACGAGATGGTCGTGCTAACAGATCAAGGCTACGACGGGGATACGATGAACGAATTGATAGGTTGGGAAGAGTCATTGGAGAATGGGTTATGGAATGAAGAAGACATGTGGTTCTTGCAGCAACAATTTAGTGATGATGTCCAACTTCAAGTTTCGCCTGTTTCAAACGTAGTTGAGAACGATACAAGCGAGAAGGACGAGATGGTCGTGCTAACAGATCAAGGCTACGACGGGGATACGATGAACGAATTGATAGGTTGGGAAGAGTCATTGGAGAATGGGTTATGGAATGAAGAAGACATGTGGTTCTTGCAGCAACAATTTAGTGATGATGTTTAA

Protein sequence

MDVRKGPWTAEEDSILFNYVNSHGEGRWNTAARSAGLKRSGKSCRLRWLNYLRPSVKRGNITLQEQLLILDLHFQLVSAIAIAIDSDVVQPPQSHLDPTHSSPSKSSWVNSHVASTTSISNSISDEVQLQVSPVSNVVENDTSEKDEMVVLTDQGYDGDTMNELIGWEESLENGLWNEEDMWFLQQQFSDDVQLQVSPVSNVVENDTSEKDEMVVLTDQGYDGDTMNELIGWEESLENGLWNEEDMWFLQQQFSDDV
BLAST of Cp4.1LG17g07680 vs. Swiss-Prot
Match: MYB40_ANTMA (Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-27
Identity = 55/73 (75.34%), Postives = 66/73 (90.41%), Query Frame = 1

Query: 1  MDVRKGPWTAEEDSILFNYVNSHGEGRWNTAARSAGLKRSGKSCRLRWLNYLRPSVKRGN 60
          ++VRKGPWT EED IL N++++HGEG WNT ARSAGLKR+GKSCRLRWLNYLRP V+RGN
Sbjct: 11 VEVRKGPWTMEEDLILINFISNHGEGVWNTIARSAGLKRTGKSCRLRWLNYLRPDVRRGN 70

Query: 61 ITLQEQLLILDLH 74
          IT +EQLLI++LH
Sbjct: 71 ITPEEQLLIMELH 83

BLAST of Cp4.1LG17g07680 vs. Swiss-Prot
Match: MY108_ARATH (Transcription factor MYB108 OS=Arabidopsis thaliana GN=MYB108 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.9e-27
Identity = 53/73 (72.60%), Postives = 66/73 (90.41%), Query Frame = 1

Query: 1  MDVRKGPWTAEEDSILFNYVNSHGEGRWNTAARSAGLKRSGKSCRLRWLNYLRPSVKRGN 60
          MD+++GPWTAEED  L NY+ ++GEGRWN+ +R AGL+R+GKSCRLRWLNYLRP V+RGN
Sbjct: 17 MDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSCRLRWLNYLRPDVRRGN 76

Query: 61 ITLQEQLLILDLH 74
          ITL+EQLLIL+LH
Sbjct: 77 ITLEEQLLILELH 89

BLAST of Cp4.1LG17g07680 vs. Swiss-Prot
Match: MYB05_ANTMA (Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-25
Identity = 74/193 (38.34%), Postives = 111/193 (57.51%), Query Frame = 1

Query: 1   MDVRKGPWTAEEDSILFNYVNSHGEGRWNTAARSAGLKRSGKSCRLRWLNYLRPSVKRGN 60
           ++VRKGPWT EED IL NY+ +HGEG WN+ ARSAGLKR+GKSCRLRWLNYLRP V+RGN
Sbjct: 11  VEVRKGPWTMEEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGN 70

Query: 61  ITLQEQLLILDLH-------FQLVSAIAIAIDSDVVQPPQSHLDPTHSSPSKSSWVNSHV 120
           IT +EQLLI++LH        ++   +    D+++    ++ +   H      S   +  
Sbjct: 71  ITPEEQLLIMELHAKWGNRWSKIAKTLPGRTDNEIKNYWRTRIQ-KHMEQGDQSSSTTFN 130

Query: 121 ASTTSISNSISDEV-QLQVSPVSNVVENDTSEKDEMVVLTDQGYDGDTMNELIGWEESLE 180
               ++ +S +D+    Q+S    VV++   ++      +  G D  T       ++S +
Sbjct: 131 NGQMNLDHSCNDQASSSQMSACGPVVDHTAVDQSSYSPHSFNGND-HTFQAPFPTDQSND 190

Query: 181 NGLWNEEDMWFLQ 186
           N +W+ ED W +Q
Sbjct: 191 N-MWSMEDFWSMQ 200

BLAST of Cp4.1LG17g07680 vs. Swiss-Prot
Match: MYB21_ARATH (Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.9e-24
Identity = 67/146 (45.89%), Postives = 89/146 (60.96%), Query Frame = 1

Query: 2   DVRKGPWTAEEDSILFNYVNSHGEGRWNTAARSAGLKRSGKSCRLRWLNYLRPSVKRGNI 61
           +VRKGPWT EED IL NY+ +HG+G WN+ A+SAGLKR+GKSCRLRWLNYLRP V+RGNI
Sbjct: 19  EVRKGPWTMEEDLILINYIANHGDGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNI 78

Query: 62  TLQEQLLILDLHFQ---LVSAIAIAIDSDVVQPPQSHLDPTHSSPSKSSW--------VN 121
           T +EQL+I++LH +     S IA             HL     +  K+ W          
Sbjct: 79  TPEEQLIIMELHAKWGNRWSKIA------------KHLPGRTDNEIKNFWRTRIQKYIKQ 138

Query: 122 SHVASTTSISNSISDEVQLQVSPVSN 137
           S V +T+S+ +  S E+  Q +  S+
Sbjct: 139 SDVTTTSSVGSHHSSEINDQAASTSS 152

BLAST of Cp4.1LG17g07680 vs. Swiss-Prot
Match: MYB24_ARATH (Transcription factor MYB24 OS=Arabidopsis thaliana GN=MYB24 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.1e-24
Identity = 75/205 (36.59%), Postives = 108/205 (52.68%), Query Frame = 1

Query: 2   DVRKGPWTAEEDSILFNYVNSHGEGRWNTAARSAGLKRSGKSCRLRWLNYLRPSVKRGNI 61
           +VRKGPWT EED IL NY+ +HGEG WN+ A+SAGLKR+GKSCRLRWLNYLRP V+RGNI
Sbjct: 16  EVRKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNI 75

Query: 62  TLQEQLLILDLHFQ---LVSAIAIAIDSDVVQPPQSHLDPTHSSPSKSSW---VNSHV-- 121
           T +EQL I++LH +     S IA             HL     +  K+ W   +  ++  
Sbjct: 76  TPEEQLTIMELHAKWGNRWSKIA------------KHLPGRTDNEIKNFWRTKIQKYIIK 135

Query: 122 -ASTTSISNSISDEVQLQVSPVSNVVENDTSEKDEMVVLTDQGYDGDTMNELIGW----- 181
              TT++ +  S+ +    +  ++ V NDT E  +M   T        +N+ + +     
Sbjct: 136 SGETTTVGSQSSEFINHHAT--TSHVMNDTQETMDMYSPTTSYQHASNINQQLNYGNYVP 195

Query: 182 ----------EESLENGLWNEEDMW 183
                      +  E   W+ +D+W
Sbjct: 196 ESGSIMMPLSVDQSEQNYWSVDDLW 206

BLAST of Cp4.1LG17g07680 vs. TrEMBL
Match: A0A0A0K5V3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G413890 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.6e-35
Identity = 109/258 (42.25%), Postives = 135/258 (52.33%), Query Frame = 1

Query: 1   MDVRKGPWTAEEDSILFNYVNSHGEGRWNT------------------------AARSAG 60
           MDVRKGPWTAEEDS+LFNYVN HGEGRWN                         + R   
Sbjct: 19  MDVRKGPWTAEEDSVLFNYVNCHGEGRWNAVARCTGLKRTGKSCRLRWLNYLRPSVRRGN 78

Query: 61  LK---------------------------RSGKSCRLRWLNYLRPSVKRGNITLQEQLLI 120
           +                            R+    +  W   ++   K+ N  +  +   
Sbjct: 79  ITLQEQLLILELHFRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQAKQLNCDVNSKQFR 138

Query: 121 LDLHF----QLVSAIAIAIDS-----DVVQPPQSHLDPTHSSPSKSSWVNSHVASTTSIS 180
             + +    +L+  I  + DS     DV+QPP   L+ T SSPS SSWVN HVA TTS S
Sbjct: 139 DAMRYVWMPRLLERIQASTDSTTTIVDVIQPPHPPLELTQSSPSGSSWVNPHVAPTTSSS 198

Query: 181 NSISDEVQLQVSPVSNVVEN----DTSEKDEMVVLTDQGYDGDTM-NELIGWEESLENGL 193
           +SISD+VQLQVSPVS++ EN    D SE+D M++L + G DG+ M NE IG  E LENGL
Sbjct: 199 DSISDQVQLQVSPVSDMTENFNMVDKSEEDGMMMLMEHGCDGEAMINEWIGGGEVLENGL 258

BLAST of Cp4.1LG17g07680 vs. TrEMBL
Match: B6DQ66_CUCSA (Myb-like transcription factor Myb5 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.9e-31
Identity = 65/75 (86.67%), Postives = 70/75 (93.33%), Query Frame = 1

Query: 1  MDVRKGPWTAEEDSILFNYVNSHGEGRWNTAARSAGLKRSGKSCRLRWLNYLRPSVKRGN 60
          MDVRKGPWTAEEDS+LFNYVN HGEGRWN  AR  GLKR+GKSCRLRWLNYLRPSV+RGN
Sbjct: 1  MDVRKGPWTAEEDSVLFNYVNCHGEGRWNAVARCTGLKRTGKSCRLRWLNYLRPSVRRGN 60

Query: 61 ITLQEQLLILDLHFQ 76
          ITLQEQLLIL+LHF+
Sbjct: 61 ITLQEQLLILELHFR 75

BLAST of Cp4.1LG17g07680 vs. TrEMBL
Match: M5XUE4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015973mg PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 6.0e-30
Identity = 100/278 (35.97%), Postives = 143/278 (51.44%), Query Frame = 1

Query: 1   MDVRKGPWTAEEDSILFNYVNSHGEGRWNTAARSAGLKRSGKSCRLRWLNYLRPSVKRGN 60
           +D+RKGPWT EEDS+LF+Y+N HGEGRWN+ AR AGLKR+GKSCRLRWLNYLRPSV+RGN
Sbjct: 36  VDLRKGPWTVEEDSVLFDYINIHGEGRWNSLARHAGLKRTGKSCRLRWLNYLRPSVRRGN 95

Query: 61  ITLQEQLLILDLHFQLVSAIAIAIDSDVVQPPQSHLDPTHSSPSKSSW---VNSHVASTT 120
           ITLQEQLLIL LH +  +  +   +         +L     +  K+ W   V        
Sbjct: 96  ITLQEQLLILQLHSRWGNRWSKIAE---------YLPGRTDNEIKNYWRTRVQKQAKQLK 155

Query: 121 SISNSISDEVQLQVSPVSNVVENDTSEKDEMVVLTDQGYDGDTMNELIGWEESLENGLWN 180
              NS   +  ++   +  ++E         +    Q   G +  E  G   + E+  W 
Sbjct: 156 CDVNSKQFQDAMRYVWIPRLIER--------IQALPQSLPGQSSTESTGLTTASESQNWI 215

Query: 181 EEDMW-----FLQQQFSDDVQLQVSPVSNVVENDTSEKDEMVVLTDQG---YDGDTMNEL 240
           + ++          + SD +Q+   P     +   +        +D G   Y+  T ++ 
Sbjct: 216 DSNLMPETSGSTSSESSDQLQVCSIPDPTTTDQFMNYPSTNQYGSDNGSGCYEYGTNSDF 275

Query: 241 IGWEE-----------SLENGLWNEEDMWFLQQQFSDD 257
           +G+E+           S+EN LWNEE++WFLQQQ SDD
Sbjct: 276 LGFEQSNYWSSSGGDISVEN-LWNEENIWFLQQQLSDD 295

BLAST of Cp4.1LG17g07680 vs. TrEMBL
Match: W9R6Q8_9ROSA (Myb-related protein 305 OS=Morus notabilis GN=L484_018779 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.1e-29
Identity = 61/73 (83.56%), Postives = 69/73 (94.52%), Query Frame = 1

Query: 1  MDVRKGPWTAEEDSILFNYVNSHGEGRWNTAARSAGLKRSGKSCRLRWLNYLRPSVKRGN 60
          +D+RKGPWT EEDS+LFNYV+ HGEGRWN+ AR AGLKR+GKSCRLRWLNYLRPSV+RGN
Sbjct: 23 VDLRKGPWTVEEDSLLFNYVSLHGEGRWNSLARHAGLKRTGKSCRLRWLNYLRPSVRRGN 82

Query: 61 ITLQEQLLILDLH 74
          ITLQEQLLIL+LH
Sbjct: 83 ITLQEQLLILELH 95

BLAST of Cp4.1LG17g07680 vs. TrEMBL
Match: A5C1Y6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009676 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.6e-29
Identity = 101/263 (38.40%), Postives = 136/263 (51.71%), Query Frame = 1

Query: 1   MDVRKGPWTAEEDSILFNYVNSHGEGRWNTAARSAGLKRSGKSCRLRWLNYLRPSVKRGN 60
           MD+RKGPWTAEED++L NY+  HGEGRWN+ AR AGLKR+GKSCRLRWLNYLRP+VKRGN
Sbjct: 3   MDLRKGPWTAEEDTLLNNYITIHGEGRWNSLARCAGLKRTGKSCRLRWLNYLRPNVKRGN 62

Query: 61  ITLQEQLLILDLHFQLVSAIAIAIDSDVVQPPQSHLDPTHSSPSKSSW---VNSHVASTT 120
           ITLQEQLLIL+LH +  +       S + Q    HL     +  K+ W   V        
Sbjct: 63  ITLQEQLLILELHSRYGNRW-----SKIAQ----HLPGRTDNEIKNYWRTRVQKQAKQLK 122

Query: 121 SISNSISDEVQLQVSPVSNVVENDTSEKDEMVVLTDQGYDGDTMNELIGWEESLENGLWN 180
              NS      ++   +  +VE   +   +        Y     ++++    + E GL  
Sbjct: 123 CDVNSKQFRDTMRYVWMPRLVERIKAAGGDSTPTAPATYGHHMSSQILDMPRNGEFGLGY 182

Query: 181 EEDMWFLQQQFSDDVQLQVSPVSNVVENDTSEKDEMVVLTDQGYDGDTMNELIGWE---- 240
            +          +  + QVSPVS++    T   D              + +  GW     
Sbjct: 183 SD---------PEGSETQVSPVSDM----TDYYDFSGGXCSDSQQNGGLEQSNGWSLGGG 242

Query: 241 ESLENGLWNEEDMWFLQQQFSDD 257
           +SLEN L N+ED+WFL+QQF DD
Sbjct: 243 DSLEN-LLNDEDIWFLKQQFFDD 242

BLAST of Cp4.1LG17g07680 vs. TAIR10
Match: AT5G49620.2 (AT5G49620.2 myb domain protein 78)

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-29
Identity = 57/73 (78.08%), Postives = 64/73 (87.67%), Query Frame = 1

Query: 1  MDVRKGPWTAEEDSILFNYVNSHGEGRWNTAARSAGLKRSGKSCRLRWLNYLRPSVKRGN 60
          MDVR+GPWT EED  L NY+ SHGEGRWN+ AR A LKR+GKSCRLRWLNYLRP V+RGN
Sbjct: 24 MDVRRGPWTVEEDLELINYIASHGEGRWNSLARCAELKRTGKSCRLRWLNYLRPDVRRGN 83

Query: 61 ITLQEQLLILDLH 74
          ITL+EQLLIL+LH
Sbjct: 84 ITLEEQLLILELH 96

BLAST of Cp4.1LG17g07680 vs. TAIR10
Match: AT3G06490.1 (AT3G06490.1 myb domain protein 108)

HSP 1 Score: 122.1 bits (305), Expect = 5.0e-28
Identity = 53/73 (72.60%), Postives = 66/73 (90.41%), Query Frame = 1

Query: 1  MDVRKGPWTAEEDSILFNYVNSHGEGRWNTAARSAGLKRSGKSCRLRWLNYLRPSVKRGN 60
          MD+++GPWTAEED  L NY+ ++GEGRWN+ +R AGL+R+GKSCRLRWLNYLRP V+RGN
Sbjct: 17 MDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSCRLRWLNYLRPDVRRGN 76

Query: 61 ITLQEQLLILDLH 74
          ITL+EQLLIL+LH
Sbjct: 77 ITLEEQLLILELH 89

BLAST of Cp4.1LG17g07680 vs. TAIR10
Match: AT2G47190.1 (AT2G47190.1 myb domain protein 2)

HSP 1 Score: 121.7 bits (304), Expect = 6.6e-28
Identity = 54/72 (75.00%), Postives = 63/72 (87.50%), Query Frame = 1

Query: 2  DVRKGPWTAEEDSILFNYVNSHGEGRWNTAARSAGLKRSGKSCRLRWLNYLRPSVKRGNI 61
          DVRKGPWT EED+IL N+V+ HG+ RWN  ARS+GLKR+GKSCRLRWLNYLRP V+RGNI
Sbjct: 19 DVRKGPWTEEEDAILVNFVSIHGDARWNHIARSSGLKRTGKSCRLRWLNYLRPDVRRGNI 78

Query: 62 TLQEQLLILDLH 74
          TL+EQ +IL LH
Sbjct: 79 TLEEQFMILKLH 90

BLAST of Cp4.1LG17g07680 vs. TAIR10
Match: AT1G25340.1 (AT1G25340.1 myb domain protein 116)

HSP 1 Score: 119.0 bits (297), Expect = 4.3e-27
Identity = 51/70 (72.86%), Postives = 63/70 (90.00%), Query Frame = 1

Query: 4  RKGPWTAEEDSILFNYVNSHGEGRWNTAARSAGLKRSGKSCRLRWLNYLRPSVKRGNITL 63
          RKGPWT EED++L NY++ +GEGRWN  A+S+GLKR+GKSCRLRWLNYL+P +KRGN+T 
Sbjct: 19 RKGPWTLEEDTLLTNYISHNGEGRWNLLAKSSGLKRAGKSCRLRWLNYLKPDIKRGNLTP 78

Query: 64 QEQLLILDLH 74
          QEQLLIL+LH
Sbjct: 79 QEQLLILELH 88

BLAST of Cp4.1LG17g07680 vs. TAIR10
Match: AT1G48000.1 (AT1G48000.1 myb domain protein 112)

HSP 1 Score: 116.7 bits (291), Expect = 2.1e-26
Identity = 48/73 (65.75%), Postives = 64/73 (87.67%), Query Frame = 1

Query: 1   MDVRKGPWTAEEDSILFNYVNSHGEGRWNTAARSAGLKRSGKSCRLRWLNYLRPSVKRGN 60
           +++R+GPWT EED  L +Y++ HGEGRWN+ +RSAGL R+GKSCRLRWLNYLRP ++RG+
Sbjct: 30  IEIRRGPWTVEEDMKLVSYISLHGEGRWNSLSRSAGLNRTGKSCRLRWLNYLRPDIRRGD 89

Query: 61  ITLQEQLLILDLH 74
           I+LQEQ +IL+LH
Sbjct: 90  ISLQEQFIILELH 102

BLAST of Cp4.1LG17g07680 vs. NCBI nr
Match: gi|778728329|ref|XP_004136147.2| (PREDICTED: transcription factor MYB108-like [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 5.2e-35
Identity = 109/258 (42.25%), Postives = 135/258 (52.33%), Query Frame = 1

Query: 1   MDVRKGPWTAEEDSILFNYVNSHGEGRWNT------------------------AARSAG 60
           MDVRKGPWTAEEDS+LFNYVN HGEGRWN                         + R   
Sbjct: 23  MDVRKGPWTAEEDSVLFNYVNCHGEGRWNAVARCTGLKRTGKSCRLRWLNYLRPSVRRGN 82

Query: 61  LK---------------------------RSGKSCRLRWLNYLRPSVKRGNITLQEQLLI 120
           +                            R+    +  W   ++   K+ N  +  +   
Sbjct: 83  ITLQEQLLILELHFRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQAKQLNCDVNSKQFR 142

Query: 121 LDLHF----QLVSAIAIAIDS-----DVVQPPQSHLDPTHSSPSKSSWVNSHVASTTSIS 180
             + +    +L+  I  + DS     DV+QPP   L+ T SSPS SSWVN HVA TTS S
Sbjct: 143 DAMRYVWMPRLLERIQASTDSTTTIVDVIQPPHPPLELTQSSPSGSSWVNPHVAPTTSSS 202

Query: 181 NSISDEVQLQVSPVSNVVEN----DTSEKDEMVVLTDQGYDGDTM-NELIGWEESLENGL 193
           +SISD+VQLQVSPVS++ EN    D SE+D M++L + G DG+ M NE IG  E LENGL
Sbjct: 203 DSISDQVQLQVSPVSDMTENFNMVDKSEEDGMMMLMEHGCDGEAMINEWIGGGEVLENGL 262

BLAST of Cp4.1LG17g07680 vs. NCBI nr
Match: gi|700189807|gb|KGN45040.1| (hypothetical protein Csa_7G413890 [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 5.2e-35
Identity = 109/258 (42.25%), Postives = 135/258 (52.33%), Query Frame = 1

Query: 1   MDVRKGPWTAEEDSILFNYVNSHGEGRWNT------------------------AARSAG 60
           MDVRKGPWTAEEDS+LFNYVN HGEGRWN                         + R   
Sbjct: 19  MDVRKGPWTAEEDSVLFNYVNCHGEGRWNAVARCTGLKRTGKSCRLRWLNYLRPSVRRGN 78

Query: 61  LK---------------------------RSGKSCRLRWLNYLRPSVKRGNITLQEQLLI 120
           +                            R+    +  W   ++   K+ N  +  +   
Sbjct: 79  ITLQEQLLILELHFRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQAKQLNCDVNSKQFR 138

Query: 121 LDLHF----QLVSAIAIAIDS-----DVVQPPQSHLDPTHSSPSKSSWVNSHVASTTSIS 180
             + +    +L+  I  + DS     DV+QPP   L+ T SSPS SSWVN HVA TTS S
Sbjct: 139 DAMRYVWMPRLLERIQASTDSTTTIVDVIQPPHPPLELTQSSPSGSSWVNPHVAPTTSSS 198

Query: 181 NSISDEVQLQVSPVSNVVEN----DTSEKDEMVVLTDQGYDGDTM-NELIGWEESLENGL 193
           +SISD+VQLQVSPVS++ EN    D SE+D M++L + G DG+ M NE IG  E LENGL
Sbjct: 199 DSISDQVQLQVSPVSDMTENFNMVDKSEEDGMMMLMEHGCDGEAMINEWIGGGEVLENGL 258

BLAST of Cp4.1LG17g07680 vs. NCBI nr
Match: gi|659122948|ref|XP_008461407.1| (PREDICTED: transcription factor MYB108-like [Cucumis melo])

HSP 1 Score: 155.2 bits (391), Expect = 1.5e-34
Identity = 109/258 (42.25%), Postives = 135/258 (52.33%), Query Frame = 1

Query: 1   MDVRKGPWTAEEDSILFNYVNSHGEGRWNT------------------------AARSAG 60
           MDVRKGPWTAEEDS+LFNYVN HGEGRWN                         + R   
Sbjct: 23  MDVRKGPWTAEEDSVLFNYVNCHGEGRWNAVARCTGLKRTGKSCRLRWLNYLRPSVRRGN 82

Query: 61  LK---------------------------RSGKSCRLRWLNYLRPSVKRGNITLQEQLLI 120
           +                            R+    +  W   ++   K+ N  +  +   
Sbjct: 83  ITLQEQLLILELHFRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQAKQLNCDVNSKQFR 142

Query: 121 LDLHF----QLVSAIAIAIDS-----DVVQPPQSHLDPTHSSPSKSSWVNSHVASTTSIS 180
             + +    +L+  I  + DS     DV+QP    L+ T SSPS SSWVN HVA TTS S
Sbjct: 143 DAMRYVWMPRLLERIQASTDSTATTVDVIQPSHPPLELTQSSPSGSSWVNPHVAPTTSSS 202

Query: 181 NSISDEVQLQVSPVSNVVEN----DTSEKDEMVVLTDQGYD-GDTMNELIGWEESLENGL 193
           +SI D+VQLQVSPVS+VVEN    DT+E+D +V+L + G D  + MNE IG EE LENGL
Sbjct: 203 DSIFDQVQLQVSPVSDVVENFNMVDTTEEDRVVMLMEHGCDVEEAMNEWIGGEELLENGL 262

BLAST of Cp4.1LG17g07680 vs. NCBI nr
Match: gi|206604183|gb|ACI16512.1| (myb-like transcription factor Myb5 [Cucumis sativus])

HSP 1 Score: 144.4 bits (363), Expect = 2.7e-31
Identity = 65/75 (86.67%), Postives = 70/75 (93.33%), Query Frame = 1

Query: 1  MDVRKGPWTAEEDSILFNYVNSHGEGRWNTAARSAGLKRSGKSCRLRWLNYLRPSVKRGN 60
          MDVRKGPWTAEEDS+LFNYVN HGEGRWN  AR  GLKR+GKSCRLRWLNYLRPSV+RGN
Sbjct: 1  MDVRKGPWTAEEDSVLFNYVNCHGEGRWNAVARCTGLKRTGKSCRLRWLNYLRPSVRRGN 60

Query: 61 ITLQEQLLILDLHFQ 76
          ITLQEQLLIL+LHF+
Sbjct: 61 ITLQEQLLILELHFR 75

BLAST of Cp4.1LG17g07680 vs. NCBI nr
Match: gi|645243081|ref|XP_008227817.1| (PREDICTED: transcription factor MYB108 [Prunus mume])

HSP 1 Score: 139.8 bits (351), Expect = 6.6e-30
Identity = 102/277 (36.82%), Postives = 139/277 (50.18%), Query Frame = 1

Query: 1   MDVRKGPWTAEEDSILFNYVNSHGEGRWNTAARSAGLKRSGKSCRLRWLNYLRPSVKRGN 60
           +D+RKGPWT EEDS+LFNY+N+HGEGRWN+ AR AGLKR+GKSCRLRWLNYLRPSV+RGN
Sbjct: 36  VDLRKGPWTVEEDSVLFNYINTHGEGRWNSLARHAGLKRTGKSCRLRWLNYLRPSVRRGN 95

Query: 61  ITLQEQLLILDLHFQLVSAIAIAIDSDVVQPPQSHLDPTHSSPSKSSW---VNSHVASTT 120
           ITLQEQLLIL LH +  +  +   +         +L     +  K+ W   V        
Sbjct: 96  ITLQEQLLILQLHSRWGNRWSKIAE---------YLPGRTDNEIKNYWRTRVQKQAKQLK 155

Query: 121 SISNSISDEVQLQVSPVSNVVENDTSEKDEMVVLTDQGYDGDTMNELIGWEESLENGLWN 180
              NS   +  ++   +  ++E         +    Q   G +  E  G   + E+  W 
Sbjct: 156 CDVNSKQFQDAMRYVWIPRLIER--------IQALPQSLAGQSSTESTGLTTASESQYWI 215

Query: 181 E-----EDMWFLQQQFSDDVQLQVSPVSNVVENDTSEKDEMVVLTDQG---YDGDTMNEL 240
           +     E       + SD +Q+   P     +   +        +D G   Y   T ++ 
Sbjct: 216 DSNFLPETSGSTSSESSDQLQVCSIPDPTTTDQFMNNPSTNQYGSDNGSGCYQYGTNSDF 275

Query: 241 IGWEES---LENG-------LWNEEDMWFLQQQFSDD 257
            G+E S     NG       LWNEE++WFLQQQ SDD
Sbjct: 276 PGFEHSNYWSSNGGDLSVENLWNEENIWFLQQQLSDD 295

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
MYB40_ANTMA1.1e-2775.34Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1[more]
MY108_ARATH8.9e-2772.60Transcription factor MYB108 OS=Arabidopsis thaliana GN=MYB108 PE=1 SV=1[more]
MYB05_ANTMA1.7e-2538.34Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1[more]
MYB21_ARATH1.9e-2445.89Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1 SV=1[more]
MYB24_ARATH4.1e-2436.59Transcription factor MYB24 OS=Arabidopsis thaliana GN=MYB24 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0K5V3_CUCSA3.6e-3542.25Uncharacterized protein OS=Cucumis sativus GN=Csa_7G413890 PE=4 SV=1[more]
B6DQ66_CUCSA1.9e-3186.67Myb-like transcription factor Myb5 (Fragment) OS=Cucumis sativus PE=2 SV=1[more]
M5XUE4_PRUPE6.0e-3035.97Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015973mg PE=4 SV=1[more]
W9R6Q8_9ROSA5.1e-2983.56Myb-related protein 305 OS=Morus notabilis GN=L484_018779 PE=4 SV=1[more]
A5C1Y6_VITVI6.6e-2938.40Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009676 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G49620.22.7e-2978.08 myb domain protein 78[more]
AT3G06490.15.0e-2872.60 myb domain protein 108[more]
AT2G47190.16.6e-2875.00 myb domain protein 2[more]
AT1G25340.14.3e-2772.86 myb domain protein 116[more]
AT1G48000.12.1e-2665.75 myb domain protein 112[more]
Match NameE-valueIdentityDescription
gi|778728329|ref|XP_004136147.2|5.2e-3542.25PREDICTED: transcription factor MYB108-like [Cucumis sativus][more]
gi|700189807|gb|KGN45040.1|5.2e-3542.25hypothetical protein Csa_7G413890 [Cucumis sativus][more]
gi|659122948|ref|XP_008461407.1|1.5e-3442.25PREDICTED: transcription factor MYB108-like [Cucumis melo][more]
gi|206604183|gb|ACI16512.1|2.7e-3186.67myb-like transcription factor Myb5 [Cucumis sativus][more]
gi|645243081|ref|XP_008227817.1|6.6e-3036.82PREDICTED: transcription factor MYB108 [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR017930Myb_dom
IPR009057Homeobox-like_sf
IPR001005SANT/Myb
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042221 response to chemical
biological_process GO:0006950 response to stress
biological_process GO:0009414 response to water deprivation
biological_process GO:0009651 response to salt stress
biological_process GO:0009751 response to salicylic acid
biological_process GO:0009723 response to ethylene
biological_process GO:0046686 response to cadmium ion
biological_process GO:0009737 response to abscisic acid
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0016036 cellular response to phosphate starvation
biological_process GO:0008150 biological_process
biological_process GO:0050896 response to stimulus
biological_process GO:1901700 response to oxygen-containing compound
biological_process GO:0009725 response to hormone
biological_process GO:0001101 response to acid chemical
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:0050794 regulation of cellular process
biological_process GO:0051716 cellular response to stimulus
biological_process GO:0009987 cellular process
biological_process GO:0007154 cell communication
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g07680.1Cp4.1LG17g07680.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 5..52
score: 2.9
IPR001005SANT/Myb domainSMARTSM00717santcoord: 4..54
score: 1.6
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 6..70
score: 1.0
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 6..76
score: 1.9
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 1..56
score: 24
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 1..76
score: 2.7
NoneNo IPR availablePANTHERPTHR10641:SF494TRANSCRIPTION FACTOR MYB108coord: 1..76
score: 2.7

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG17g07680Cp4.1LG12g06290Cucurbita pepo (Zucchini)cpecpeB157