Cp4.1LG17g06920 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG17g06920
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionZinc metalloproteinase aureolysin
LocationCp4.1LG17 : 6329251 .. 6330539 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACGGTCGTACGACTCCATGCCCCAATGGATAAGGCGCTGGTCTACGAAACCAGAGATTCTGGGTTCGATCCCCAGTGGAGTCGTTTTCATTTTTTTATCAGCTTATTTTTCTTTGAAAATGGGGGAAGCAAACGACGCCGTTCTGCATGCTATAAATTTCTCCGTCTTAGTCACATTACTAAAATTTCAGACATGCCAGTTCTATTTTCTCGACTGGGAAATTCCATCCCCTTCTCCGGCCTTTTCAGGTAATTCCTCAAAACTTGTTTCTAGAGATTCTCTTACCAGCGTTGTTTGTTGAAAACTTTCTGTAATCTATAACTTTTGGACCAAGAAATGTTTATTCCAATGAATAATGTTACTGATGATTTGGTTTGCTTAGTAATACAATCGCGTCGGTCAAATTCTTGTTAATTTGTAATATTGATGTCATGCCGAGTGCCGGAATCGCAGTTTTATCACCAAGTTTATGTGCATGTCTTTGTAAATTTGATTTTGGTGGCTCTGTTATTTCTTTTGCTTGAGAGATGCTAATTTCTAAATCGAAAAATCGTTGGTACTATGCTTATGCTGAATTAATGTGATTTTTCATGCAAAATCTGATGGTAAGGGGCTCTAGAAGTGTTCTGTACAAACAGGTTTTGGTTAGTGGAACAAAATTTTTATTGAACGAGGTCTGGTTAGCTACTTTTTTCAAGTTAATTCTCTTCGATGTTTTTGTGGATGGTCTATTTCTGTGAACTAAAATTCTTGCATACTTGTGAATATTGATTTTAAGTTTAGATCAGCTTTAACTCTTATATGAAGAAAAGTGCACAATAACCTTAACTTTACAGCCCACCTAATTATTTCTAATCGCAGTTTTAAAAAACAGAAGCATAAAGTTGTTTGTCTAGGACAACTCTTAATGTTTTTCTTTCCCCGTATAGGCAACTGGAGCAAGAGATGGAAACTGTCATAAGGGTTTTGCAGCCTGGACCTTTGGGGATTATTGAACACAAGTTTTCTGCTGAGGAGATTCGCCGGGCACAAGCCACTGTTCGCGAAGCAGTAAATAACTGGCGAAGGAATACAAGTATTGAAAAACAAAGTAGTATGTCAAGTAATCGTATTTAGGAATTATACTGTTTCCATAGAGATTTTGAATGACATGTTGTGTAATTGCTTTATGAGTTTCTGAATAAAAATTAGATTAAATAGTGACATTTACTAAACTTGAAATAAAAATTGAACTCAAAAGTATGATATTGATAAAAATAGTAAGCCTACAGAGCATTTTACTTTCACT

mRNA sequence

CACGGTCGTACGACTCCATGCCCCAATGGATAAGGCGCTGGTCTACGAAACCAGAGATTCTGGGTTCGATCCCCAGTGGAGTCGTTTTCATTTTTTTATCAGCTTATTTTTCTTTGAAAATGGGGGAAGCAAACGACGCCGTTCTGCATGCTATAAATTTCTCCGTCTTAGTCACATTACTAAAATTTCAGACATGCCAGTTCTATTTTCTCGACTGGGAAATTCCATCCCCTTCTCCGGCCTTTTCAGGCAACTGGAGCAAGAGATGGAAACTGTCATAAGGGTTTTGCAGCCTGGACCTTTGGGGATTATTGAACACAAGTTTTCTGCTGAGGAGATTCGCCGGGCACAAGCCACTGTTCGCGAAGCAGTAAATAACTGGCGAAGGAATACAAGTATTGAAAAACAAAGTAGTATGTCAAGTAATCGTATTTAGGAATTATACTGTTTCCATAGAGATTTTGAATGACATGTTGTGTAATTGCTTTATGAGTTTCTGAATAAAAATTAGATTAAATAGTGACATTTACTAAACTTGAAATAAAAATTGAACTCAAAAGTATGATATTGATAAAAATAGTAAGCCTACAGAGCATTTTACTTTCACT

Coding sequence (CDS)

ATGGATAAGGCGCTGGTCTACGAAACCAGAGATTCTGGGTTCGATCCCCAGTGGAGTCGTTTTCATTTTTTTATCAGCTTATTTTTCTTTGAAAATGGGGGAAGCAAACGACGCCGTTCTGCATGCTATAAATTTCTCCGTCTTAGTCACATTACTAAAATTTCAGACATGCCAGTTCTATTTTCTCGACTGGGAAATTCCATCCCCTTCTCCGGCCTTTTCAGGCAACTGGAGCAAGAGATGGAAACTGTCATAAGGGTTTTGCAGCCTGGACCTTTGGGGATTATTGAACACAAGTTTTCTGCTGAGGAGATTCGCCGGGCACAAGCCACTGTTCGCGAAGCAGTAAATAACTGGCGAAGGAATACAAGTATTGAAAAACAAAGTAGTATGTCAAGTAATCGTATTTAG

Protein sequence

MDKALVYETRDSGFDPQWSRFHFFISLFFFENGGSKRRRSACYKFLRLSHITKISDMPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAVNNWRRNTSIEKQSSMSSNRI
Homology
[Close]
BLAST of Cp4.1LG17g06920 vs. TrEMBL
Match: A0A0A0K7N1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G394630 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.2e-30
Identity = 70/78 (89.74%), Postives = 75/78 (96.15%), Query Frame = 1 

Query: 57  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 116
           M + FSRLG+SIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEE+RRAQ+TVREAV
Sbjct: 1   MAISFSRLGSSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV 60

Query: 117 NNWRRNTSIEKQSSMSSN 135
           NNWRRNT IEKQSS+SSN
Sbjct: 61  NNWRRNTIIEKQSSISSN 78

[Close]
BLAST of Cp4.1LG17g06920 vs. TrEMBL
Match: D7TP33_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0104g01430 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.2e-23
Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 1 

Query: 57  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 116
           MPV FSRLG S+PFSGLFRQLEQE+ETV++VLQPGPLGIIEHKFS EEIR A+ATV  AV
Sbjct: 1   MPVSFSRLGKSLPFSGLFRQLEQEIETVVKVLQPGPLGIIEHKFSTEEIREAEATVNRAV 60

Query: 117 NNWRRNTSIEKQSSMSSNRI 137
            NWRRN ++E+ S +  + I
Sbjct: 61  ANWRRNANLEQGSDILKSYI 80

[Close]
BLAST of Cp4.1LG17g06920 vs. TrEMBL
Match: A0A067K765_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13871 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 5.4e-22
Identity = 53/83 (63.86%), Postives = 66/83 (79.52%), Query Frame = 1 

Query: 49  SHITKISDMPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRA 108
           S   + S+M + FS LGN++PFS +FRQLEQEMETV++VLQPGPLGI+EHKFS EEIR A
Sbjct: 456 SDYKETSEMRISFSGLGNALPFSRIFRQLEQEMETVVKVLQPGPLGIVEHKFSVEEIREA 515

Query: 109 QATVREAVNNWRRNTSIEKQSSM 132
            ATV  AV NWRRN  +E++S +
Sbjct: 516 NATVSRAVANWRRNAKLEQRSDI 538

[Close]
BLAST of Cp4.1LG17g06920 vs. TrEMBL
Match: B9S3V1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0555430 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.1e-20
Identity = 50/75 (66.67%), Postives = 62/75 (82.67%), Query Frame = 1 

Query: 57  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 116
           M + FS LGNS+PFS +FRQ+EQE+ETV+ VLQPGPLGI+EHKFSAEEIR A ATV+ AV
Sbjct: 1   MRISFSALGNSLPFSRIFRQVEQEIETVVNVLQPGPLGIVEHKFSAEEIRDANATVQRAV 60

Query: 117 NNWRRNTSIEKQSSM 132
             WRRN ++E Q+ +
Sbjct: 61  ITWRRNANLEHQNDI 75

[Close]
BLAST of Cp4.1LG17g06920 vs. TrEMBL
Match: A0A0D2SSP1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G009300 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 6.7e-20
Identity = 54/80 (67.50%), Postives = 62/80 (77.50%), Query Frame = 1 

Query: 57  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 116
           M    S+LGN +P   LFRQLEQEMETVI+VLQPGPLGIIEHKFSAEEIR A ATVR+AV
Sbjct: 1   MRASLSQLGNILPIPTLFRQLEQEMETVIKVLQPGPLGIIEHKFSAEEIREANATVRKAV 60

Query: 117 NNWRRNTSIEKQSSMSSNRI 137
            NWRRN  IE ++ +  + I
Sbjct: 61  ENWRRNAIIEHRNGILKDYI 80

[Close]
BLAST of Cp4.1LG17g06920 vs. TAIR10
Match: AT3G62920.1 (AT3G62920.1 unknown protein)

HSP 1 Score: 93.6 bits (231), Expect = 1.0e-19
Identity = 44/74 (59.46%), Postives = 59/74 (79.73%), Query Frame = 1 

Query: 63  RLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAVNNWRRN 122
           R+  ++PFSG+ RQLE+E ETVI VLQPGPLGIIEHKFSA+EIR A+ATV  AV++WRR+
Sbjct: 5   RIARALPFSGILRQLEKEAETVINVLQPGPLGIIEHKFSAQEIREAKATVSRAVDSWRRH 64

Query: 123 TSIEKQSSMSSNRI 137
           + +E  + +  + I
Sbjct: 65  SEVEHANGLLKDYI 78

[Close]
BLAST of Cp4.1LG17g06920 vs. NCBI nr
Match: gi|778727909|ref|XP_011659338.1| (PREDICTED: uncharacterized protein LOC101214859 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 6.0e-30
Identity = 70/78 (89.74%), Postives = 75/78 (96.15%), Query Frame = 1 

Query: 57  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 116
           M + FSRLG+SIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEE+RRAQ+TVREAV
Sbjct: 1   MAISFSRLGSSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV 60

Query: 117 NNWRRNTSIEKQSSMSSN 135
           NNWRRNT IEKQSS+SSN
Sbjct: 61  NNWRRNTIIEKQSSISSN 78

[Close]
BLAST of Cp4.1LG17g06920 vs. NCBI nr
Match: gi|659101479|ref|XP_008451625.1| (PREDICTED: uncharacterized protein LOC103492858 [Cucumis melo])

HSP 1 Score: 139.0 bits (349), Expect = 6.0e-30
Identity = 70/78 (89.74%), Postives = 74/78 (94.87%), Query Frame = 1 

Query: 57  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 116
           M + FSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEE+RRAQ+TVREAV
Sbjct: 1   MAISFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV 60

Query: 117 NNWRRNTSIEKQSSMSSN 135
           NNWRRNT IEKQS +SSN
Sbjct: 61  NNWRRNTLIEKQSCISSN 78

[Close]
BLAST of Cp4.1LG17g06920 vs. NCBI nr
Match: gi|225436767|ref|XP_002267360.1| (PREDICTED: uncharacterized protein LOC100240880 [Vitis vinifera])

HSP 1 Score: 116.7 bits (291), Expect = 3.2e-23
Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 1 

Query: 57  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 116
           MPV FSRLG S+PFSGLFRQLEQE+ETV++VLQPGPLGIIEHKFS EEIR A+ATV  AV
Sbjct: 1   MPVSFSRLGKSLPFSGLFRQLEQEIETVVKVLQPGPLGIIEHKFSTEEIREAEATVNRAV 60

Query: 117 NNWRRNTSIEKQSSMSSNRI 137
            NWRRN ++E+ S +  + I
Sbjct: 61  ANWRRNANLEQGSDILKSYI 80

[Close]
BLAST of Cp4.1LG17g06920 vs. NCBI nr
Match: gi|643716474|gb|KDP28100.1| (hypothetical protein JCGZ_13871 [Jatropha curcas])

HSP 1 Score: 112.1 bits (279), Expect = 7.8e-22
Identity = 53/83 (63.86%), Postives = 66/83 (79.52%), Query Frame = 1 

Query: 49  SHITKISDMPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRA 108
           S   + S+M + FS LGN++PFS +FRQLEQEMETV++VLQPGPLGI+EHKFS EEIR A
Sbjct: 456 SDYKETSEMRISFSGLGNALPFSRIFRQLEQEMETVVKVLQPGPLGIVEHKFSVEEIREA 515

Query: 109 QATVREAVNNWRRNTSIEKQSSM 132
            ATV  AV NWRRN  +E++S +
Sbjct: 516 NATVSRAVANWRRNAKLEQRSDI 538

[Close]
BLAST of Cp4.1LG17g06920 vs. NCBI nr
Match: gi|802688543|ref|XP_012082687.1| (PREDICTED: uncharacterized protein LOC105642466 [Jatropha curcas])

HSP 1 Score: 108.6 bits (270), Expect = 8.6e-21
Identity = 51/75 (68.00%), Postives = 62/75 (82.67%), Query Frame = 1 

Query: 57  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 116
           M + FS LGN++PFS +FRQLEQEMETV++VLQPGPLGI+EHKFS EEIR A ATV  AV
Sbjct: 1   MRISFSGLGNALPFSRIFRQLEQEMETVVKVLQPGPLGIVEHKFSVEEIREANATVSRAV 60

Query: 117 NNWRRNTSIEKQSSM 132
            NWRRN  +E++S +
Sbjct: 61  ANWRRNAKLEQRSDI 75

The following BLAST results are available for this feature:
BLAST of Cp4.1LG17g06920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG17g06920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7N1_CUCSA4.2e-3089.74Uncharacterized protein OS=Cucumis sativus GN=Csa_7G394630 PE=4 SV=1[more]
D7TP33_VITVI2.2e-2371.25Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0104g01430 PE=4 SV=... [more]
A0A067K765_JATCU5.4e-2263.86Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13871 PE=4 SV=1[more]
B9S3V1_RICCO5.1e-2066.67Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0555430 PE=4 SV=1[more]
A0A0D2SSP1_GOSRA6.7e-2067.50Uncharacterized protein OS=Gossypium raimondii GN=B456_008G009300 PE=4 SV=1[more]
BLAST of Cp4.1LG17g06920 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G62920.11.0e-1959.46 unknown protein[more]
BLAST of Cp4.1LG17g06920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778727909|ref|XP_011659338.1|6.0e-3089.74PREDICTED: uncharacterized protein LOC101214859 [Cucumis sativus][more]
gi|659101479|ref|XP_008451625.1|6.0e-3089.74PREDICTED: uncharacterized protein LOC103492858 [Cucumis melo][more]
gi|225436767|ref|XP_002267360.1|3.2e-2371.25PREDICTED: uncharacterized protein LOC100240880 [Vitis vinifera][more]
gi|643716474|gb|KDP28100.1|7.8e-2263.86hypothetical protein JCGZ_13871 [Jatropha curcas][more]
gi|802688543|ref|XP_012082687.1|8.6e-2168.00PREDICTED: uncharacterized protein LOC105642466 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g06920.1Cp4.1LG17g06920.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37235FAMILY NOT NAMEDcoord: 56..136
score: 1.5