Cp4.1LG17g04670 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG17g04670
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Charged multivesicular body protein 2a, putative
Location	Cp4.1LG17 : 3458691 .. 3461243 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAACTATCAGTAAAAGTCTAAAACTGCTTTTGCCGATCTACCAGAAGAAAAGGTGGCTCCTCCAAGGGGAGAGCTCACCGTCGCCGGGGAATTCGTCGACGGATTTTGAACAGCGAGAGATTTGCTGAGTAACGGAAGGTGAATAGGAGAAGGAATAAGCTTATCGCGATCGGAAATTGCACGAATCTTTTGGTTTGGTCAATTGACGATCAAGTATGAGCTTCCTCTTCGGTAGCCGAAAAACTCCCGCAGGTTAGTAACGTTCTTACCTTCTCTAATTATGCATATTCAGGAGATAGGTTATAGATGTTGGTGATGAATTTCTCTCTGGAGTTTAGTCCTATAAATGTCAATTTGATGTGGATGAAGTTCTGCGTTCTTTCCTCCTCTATTAATTTATATTCCGGAGCTTTGTTCTTGTGATAGCGTGATTTCTTGTGATAAGTTTCTAACTCTGGAGTTAAGTCCTGGAAACGTCAATTTGATGTGGATGACTTAACTGTTATTTCAATACTTGTAATTTTGCTCGTGATGTCGAGGAATCAATACTTTTCTATGCGTTTTAACTTGTGTAAGTAAATTCGCGCGTAAATTAGAATAGACGGCTGGAGATTGTAAATCTGCTTTGGTTTCCTGCGCAGAGATTCTGCGGGAGAACAAGAGGATGCTAGATAAGTCCATTAGAGAAATAGAACGGGAAAGACAAGGCTTGCAGTCTCAAGAAAAGAAGTTGATTGTTGAGATAAAGAAAAATGCTAAACAAGGACAGATGGTGAGTTGAGTAATTTAGAACTTGTACTTTAACATCGACACATCTTTAGTGACAGCATTTCTTTAGTTGTACTTGAAGTAAGCGTGCTTCTACTTTTTGAGTCGAAAGCTAGCCTTCCATTCTTTTTATTCTTTAGGCAGGGCGATGGATTGCCATCATCAACTCCGCACAATTTCCTTGATTCCATTTGTCTTTTGCAGGGAGCTGTTAAAATAATGGCCAAAGATCTTATCAGGACACGACATCAGATTGAAAAGTTTTATAAACTAAAATCACAGCTCCAGGGCGTGGCATTGAGAATTCAGGTATTATATGTACACTTTTCTTCAAAACCATGAGTATTATTGCCCCTCATGTTTCATTTTCATCAGAGCGAATACAATTACTGCTGATCTACAAATTTTTGGATTACAATTATTGATTTGATGTACTAGGATGAGGTGTAGTCATTCCTGATAGATGAGCTCTGAAAGTCTTAACTGAAAGCTTATGGTTATAATTTTCTACAGCTCGTCAGGTGTGCTTATGTGCTGAATACATGAAAAGAAAAGAATTATTTTACAATCTTCTTCCCACGTAATTAAAACCAAATAACAAAATGCTTTAATATTAGTTTAATATCACTCGCATCCTCTAGTTTTGTTGTTTCACAAAAGCAACATTTGAACAAAGCTGGGAATTTGAGGGAATTCTATTTTCTAGCTTCAAGGTTTTTTGAATTTCTTCCTATAATGGATTCACGAATTTCACACTTCTCTAAGTACCAAGAACTCAAAAGAAATCTAATATGTCTCATTCTGCATCAGAGTCTGTTGAAATGCACTACTAAATAATTAGAATTTTCCATTATTTCTTATGAAACAAGTGGGCCATATCCATTAAAAAGAGGAAATGTCATTGTGTATTTGAAGAAACTGTTCATCATTGTAAGAGGAGTTTTCAACGTTAGAAAAAAACTACTAAATGTTCTGATATATATACATACACATTCTCAAACGAATTCTTACATTCTTTTTTAGACCATAAAGATATACAGCTGTTTTTTAATCAATTGACACAATTTCTACAGTTGTGATTATTCAAATTTAGCTCCAATTGCTTGCTTCTGCAGACTCTGAAATCAACTCAAGCTATGGGAGAAGCCATGAAGGGTGTTACTAAGGCAATGGGCCAGATGAATAGGCAGATGAACTTGCCGGCATTGCAGAAGATAATGCAAGAGTTTGAGAGGCAGAATGAGAAGATGGAAATGACATCTGAAATGATGGCAGATGCTCTTGACGATGCTTTTGAAGGAGATGAAGAAGAAGAGGAGACAGAAGAGCTTGTAAGTCAGGTGCTCGATGAGATTGGAATTGATATCAACTCGGAGGTAAACATGCCCACATTTTTTCACAATGGTCCATATATTATCGTGGGAAGGGTAATTTAAACACGATCTTTTTGCTCACATGCAGCTTGTGAACGCACCCTCAGCTTCTGTGTCAGTGTCAACTGCAAATAATAGGGTTGCCCAAGCAGAAGCCGAAGATACTGGAATTGACAGTGACTTGCAGGCTAGGCTGGACAACTTGAGAAAGATGTAGGTATCCTCCAATAATAATGGGGAAATAATAACACTCTGATAATATAAAATTAAATCATGTATTGCTTATATTTGAACTCTATTCATCCAAGTTTGTGTTTGGCTGATATATTGACAAGTATGATCTCTTGTTTGGAGAAATGTGACAAAGTATTTAGCATTTGTGATCAGGTAATTCTCTCTTTTACAAATTTT

mRNA sequence

CGAACTATCAGTAAAAGTCTAAAACTGCTTTTGCCGATCTACCAGAAGAAAAGGTGGCTCCTCCAAGGGGAGAGCTCACCGTCGCCGGGGAATTCGTCGACGGATTTTGAACAGCGAGAGATTTGCTGAGTAACGGAAGGTGAATAGGAGAAGGAATAAGCTTATCGCGATCGGAAATTGCACGAATCTTTTGGTTTGGTCAATTGACGATCAAGTATGAGCTTCCTCTTCGGTAGCCGAAAAACTCCCGCAGAGATTCTGCGGGAGAACAAGAGGATGCTAGATAAGTCCATTAGAGAAATAGAACGGGAAAGACAAGGCTTGCAGTCTCAAGAAAAGAAGTTGATTGTTGAGATAAAGAAAAATGCTAAACAAGGACAGATGGGAGCTGTTAAAATAATGGCCAAAGATCTTATCAGGACACGACATCAGATTGAAAAGTTTTATAAACTAAAATCACAGCTCCAGGGCGTGGCATTGAGAATTCAGACTCTGAAATCAACTCAAGCTATGGGAGAAGCCATGAAGGGTGTTACTAAGGCAATGGGCCAGATGAATAGGCAGATGAACTTGCCGGCATTGCAGAAGATAATGCAAGAGTTTGAGAGGCAGAATGAGAAGATGGAAATGACATCTGAAATGATGGCAGATGCTCTTGACGATGCTTTTGAAGGAGATGAAGAAGAAGAGGAGACAGAAGAGCTTGTAAGTCAGGTGCTCGATGAGATTGGAATTGATATCAACTCGGAGCTTGTGAACGCACCCTCAGCTTCTGTGTCAGTGTCAACTGCAAATAATAGGGTTGCCCAAGCAGAAGCCGAAGATACTGGAATTGACAGTGACTTGCAGGCTAGGCTGGACAACTTGAGAAAGATGTAGGTATCCTCCAATAATAATGGGGAAATAATAACACTCTGATAATATAAAATTAAATCATGTATTGCTTATATTTGAACTCTATTCATCCAAGTTTGTGTTTGGCTGATATATTGACAAGTATGATCTCTTGTTTGGAGAAATGTGACAAAGTATTTAGCATTTGTGATCAGGTAATTCTCTCTTTTACAAATTTT

Coding sequence (CDS)

ATGAGCTTCCTCTTCGGTAGCCGAAAAACTCCCGCAGAGATTCTGCGGGAGAACAAGAGGATGCTAGATAAGTCCATTAGAGAAATAGAACGGGAAAGACAAGGCTTGCAGTCTCAAGAAAAGAAGTTGATTGTTGAGATAAAGAAAAATGCTAAACAAGGACAGATGGGAGCTGTTAAAATAATGGCCAAAGATCTTATCAGGACACGACATCAGATTGAAAAGTTTTATAAACTAAAATCACAGCTCCAGGGCGTGGCATTGAGAATTCAGACTCTGAAATCAACTCAAGCTATGGGAGAAGCCATGAAGGGTGTTACTAAGGCAATGGGCCAGATGAATAGGCAGATGAACTTGCCGGCATTGCAGAAGATAATGCAAGAGTTTGAGAGGCAGAATGAGAAGATGGAAATGACATCTGAAATGATGGCAGATGCTCTTGACGATGCTTTTGAAGGAGATGAAGAAGAAGAGGAGACAGAAGAGCTTGTAAGTCAGGTGCTCGATGAGATTGGAATTGATATCAACTCGGAGCTTGTGAACGCACCCTCAGCTTCTGTGTCAGTGTCAACTGCAAATAATAGGGTTGCCCAAGCAGAAGCCGAAGATACTGGAATTGACAGTGACTTGCAGGCTAGGCTGGACAACTTGAGAAAGATGTAG

Protein sequence

MSFLFGSRKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVKIMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNEKMEMTSEMMADALDDAFEGDEEEEETEELVSQVLDEIGIDINSELVNAPSASVSVSTANNRVAQAEAEDTGIDSDLQARLDNLRKM

Homology

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BLAST of Cp4.1LG17g04670 vs. Swiss-Prot
Match: VPS2A_ARATH (Vacuolar protein sorting-associated protein 2 homolog 1 OS=Arabidopsis thaliana GN=VPS2.1 PE=1 SV=2)

HSP 1 Score: 343.6 bits (880), Expect = 1.6e-93
Identity = 193/224 (86.16%), Postives = 207/224 (92.41%), Query Frame = 1


Query: 1   MSFLFGSRKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK 60
           M+ +FG RKTPAE+LRENKRMLDKSIREIERERQGLQ+QEKKLI EIKK AKQGQMGAVK
Sbjct: 2   MNSIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLINEIKKTAKQGQMGAVK 61

Query: 61  IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           +MAKDLIRTRHQIEKFYKLKSQLQGV+LRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
Sbjct: 62  VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 121

Query: 121 ALQKIMQEFERQNEKMEMTSEMMADALDDAFEGDEEEEETEELVSQVLDEIGIDINSELV 180
           +LQKIMQEFERQNEKMEM SE+M DA+DDA EGDEEEEETE+LVSQVLDEIGIDIN ELV
Sbjct: 122 SLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQELV 181

Query: 181 NAPSASVSVSTANNRVAQAE---AEDT-GIDSDLQARLDNLRKM 221
           NAPS +V+V  A N+V QAE   AED+ GIDSDLQARLDNLRKM
Sbjct: 182 NAPSGAVAVPAAKNKVVQAEATGAEDSGGIDSDLQARLDNLRKM 225

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BLAST of Cp4.1LG17g04670 vs. Swiss-Prot
Match: CHM2A_XENLA (Charged multivesicular body protein 2a OS=Xenopus laevis GN=chmp2a PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.2e-58
Identity = 123/219 (56.16%), Postives = 168/219 (76.71%), Query Frame = 1


Query: 1   MSFLFGSRKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK 60
           M FLFG RKTP E+LR+N+R L++++RE++RERQ L+ QEKK+I +IKK AKQGQM AVK
Sbjct: 1   MEFLFGRRKTPEELLRQNQRALNRAMRELDRERQKLEQQEKKIIADIKKMAKQGQMDAVK 60

Query: 61  IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           IMAKDL+RTR  ++KF  +++ +Q V+L+IQTLKS  +M +AMKGVTKAM  MNRQ+ LP
Sbjct: 61  IMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLP 120

Query: 121 ALQKIMQEFERQNEKMEMTSEMMADALDDAFEGDEEEEETEELVSQVLDEIGIDINSELV 180
            +QKIM EFE+Q+E M+M  EMM DA+DDA   +++EEE++ +VSQVLDE+G+ +  EL 
Sbjct: 121 QIQKIMMEFEKQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVLDELGLTLTDELS 180

Query: 181 NAPSASVSVSTANNRVAQAEAEDTGIDSDLQARLDNLRK 220
           N PS   S+S A  +  +A A     D+DL+ RL+NLR+
Sbjct: 181 NLPSTGGSLSVAGAKKGEATAALADADADLEERLNNLRR 219

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BLAST of Cp4.1LG17g04670 vs. Swiss-Prot
Match: CHM2A_XENTR (Charged multivesicular body protein 2a OS=Xenopus tropicalis GN=chmp2a PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.9e-58
Identity = 123/219 (56.16%), Postives = 167/219 (76.26%), Query Frame = 1


Query: 1   MSFLFGSRKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK 60
           M FLFG RKTP E+LR+N+R L+K++RE++RERQ L+ QEKK+I +IKK AKQGQM AVK
Sbjct: 1   MEFLFGRRKTPEEMLRQNQRALNKAMREMDRERQKLEQQEKKIIADIKKMAKQGQMDAVK 60

Query: 61  IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           IMAKDL+RTR  ++KF  +++ +Q V+L+IQTLKS  +M +AMKGVTKAM  MNRQ+ LP
Sbjct: 61  IMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLP 120

Query: 121 ALQKIMQEFERQNEKMEMTSEMMADALDDAFEGDEEEEETEELVSQVLDEIGIDINSELV 180
            +QKIM EFE+Q+E M+M  EMM DA+DDA   +++EEE++ +VSQVLDE+G+ +  EL 
Sbjct: 121 QIQKIMMEFEKQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVLDELGLTLTDELS 180

Query: 181 NAPSASVSVSTANNRVAQAEAEDTGIDSDLQARLDNLRK 220
           N PS   S+S A  +  +  A     D+DL+ RL+NLR+
Sbjct: 181 NLPSTGGSLSVAGAKKGEPSAALADADADLEERLNNLRR 219

[Close]

BLAST of Cp4.1LG17g04670 vs. Swiss-Prot
Match: CM2A2_DICDI (Charged multivesicular body protein 2a homolog 2 OS=Dictyostelium discoideum GN=chmp2a2 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 8.4e-58
Identity = 124/191 (64.92%), Postives = 160/191 (83.77%), Query Frame = 1


Query: 3   FLFGSRKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVKIM 62
           FLFG +KTP E+LREN+R L+KS+REI+RER  LQ+QEKK+I++IKK AKQGQM + KIM
Sbjct: 2   FLFGKQKTPKEVLRENQRNLNKSMREIDRERVALQNQEKKIILDIKKMAKQGQMNSAKIM 61

Query: 63  AKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPAL 122
           AKDL+RTR+ I+KFY++K+QLQ V+LRIQTL+STQAM EAMKGVTKAM  MNRQMNLP  
Sbjct: 62  AKDLVRTRYHIQKFYEMKTQLQAVSLRIQTLQSTQAMAEAMKGVTKAMITMNRQMNLPQF 121

Query: 123 QKIMQEFERQNEKMEMTSEMMADALDDAFEGDEEEEETEELVSQVLDEIGIDINSELVNA 182
            KIM EFE+Q++KM+M  EMM D +D   E D EEE+++E+++QVLDEIGID+ S+LV+A
Sbjct: 122 TKIMMEFEQQSDKMDMKEEMMNDTMDQVMEQDGEEEQSQEILNQVLDEIGIDLASQLVDA 181

Query: 183 PSASVSVSTAN 194
           P+ +V  S A+
Sbjct: 182 PT-TVGTSVAS 191

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BLAST of Cp4.1LG17g04670 vs. Swiss-Prot
Match: CHM2A_DANRE (Charged multivesicular body protein 2a OS=Danio rerio GN=chmp2a PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 9.3e-57
Identity = 120/219 (54.79%), Postives = 168/219 (76.71%), Query Frame = 1


Query: 1   MSFLFGSRKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK 60
           M  LFG RKTP E+LR+N+R L++++R+++RERQ L+ QEKK+I +IKK AKQGQM AVK
Sbjct: 1   MESLFGRRKTPEEMLRQNQRALNRAMRDLDRERQRLEQQEKKIIADIKKMAKQGQMDAVK 60

Query: 61  IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           IMAKDL+RTR  ++KF  +++ +Q V+L+IQTLKS  +M +AMKGVTKAM  MNRQ+ LP
Sbjct: 61  IMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLP 120

Query: 121 ALQKIMQEFERQNEKMEMTSEMMADALDDAFEGDEEEEETEELVSQVLDEIGIDINSELV 180
            +QKIM EFERQ+E M+M  EMM DA+DDA   +++EEE++ +VSQVLDE+G+ ++ EL 
Sbjct: 121 QIQKIMMEFERQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVLDELGLTLSDELS 180

Query: 181 NAPSASVSVSTANNRVAQAEAEDTGIDSDLQARLDNLRK 220
           N P+   S+S A  + A+ +      D+DL+ RL+NLR+
Sbjct: 181 NLPATGGSLSVAAGKKAEPQPTLADADADLEERLNNLRR 219

[Close]

BLAST of Cp4.1LG17g04670 vs. TrEMBL
Match: A0A0A0K7U7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G450570 PE=3 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 1.9e-104
Identity = 214/220 (97.27%), Postives = 219/220 (99.55%), Query Frame = 1


Query: 1   MSFLFGSRKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK 60
           MSFLFGSRKTPAE+LRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK
Sbjct: 1   MSFLFGSRKTPAELLRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK 60

Query: 61  IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMG+AMKGVTKAMGQMNRQMNLP
Sbjct: 61  IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGDAMKGVTKAMGQMNRQMNLP 120

Query: 121 ALQKIMQEFERQNEKMEMTSEMMADALDDAFEGDEEEEETEELVSQVLDEIGIDINSELV 180
           ALQKIMQEFERQNE+MEMTSE+MADALDDA EGDEEEEET+ELVSQVLDEIGIDINSELV
Sbjct: 121 ALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVSQVLDEIGIDINSELV 180

Query: 181 NAPSASVSVSTANNRVAQAEAEDTGIDSDLQARLDNLRKM 221
           NAPSASVSVSTANNRVAQAEAEDTGIDSDLQARLDNLRKM
Sbjct: 181 NAPSASVSVSTANNRVAQAEAEDTGIDSDLQARLDNLRKM 220

[Close]

BLAST of Cp4.1LG17g04670 vs. TrEMBL
Match: A0A161Y210_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_011953 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 8.6e-94
Identity = 196/224 (87.50%), Postives = 211/224 (94.20%), Query Frame = 1


Query: 1   MSFLFGSRKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK 60
           MSF+FG RKTPAE+LRENKRM+DKSIREIERERQGLQ+QEKKLIV+IKK AKQGQMGAVK
Sbjct: 1   MSFIFGKRKTPAELLRENKRMIDKSIREIERERQGLQNQEKKLIVDIKKTAKQGQMGAVK 60

Query: 61  IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           +MAKDLIRTRHQIEKFYKLKSQLQGV+LRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
Sbjct: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120

Query: 121 ALQKIMQEFERQNEKMEMTSEMMADALDDAFEGDEEEEETEELVSQVLDEIGIDINSELV 180
           +LQKIMQEFERQNEKMEMTSE+MADA+DDA EGDEEEEETEELVSQVLDEIGIDINSELV
Sbjct: 121 SLQKIMQEFERQNEKMEMTSEVMADAIDDALEGDEEEEETEELVSQVLDEIGIDINSELV 180

Query: 181 NAPSASVSVSTANNRV-AQAEA---EDTGIDSDLQARLDNLRKM 221
           NAPSA+V+   A N+V AQAE    +D GIDSDLQARLDNLRK+
Sbjct: 181 NAPSATVAAPAAKNKVAAQAEVTGNDDGGIDSDLQARLDNLRKL 224

[Close]

BLAST of Cp4.1LG17g04670 vs. TrEMBL
Match: B9GKV8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s17040g PE=3 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.1e-93
Identity = 197/226 (87.17%), Postives = 211/226 (93.36%), Query Frame = 1


Query: 1   MSFLFGSRKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK 60
           MSFLFG RKTP+E+LRENKRM+DKSIREIERERQGLQ+QEKKLIVEIKKNAKQGQMGAV+
Sbjct: 1   MSFLFGKRKTPSELLRENKRMMDKSIREIERERQGLQTQEKKLIVEIKKNAKQGQMGAVR 60

Query: 61  IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           +MAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
Sbjct: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120

Query: 121 ALQKIMQEFERQNEKMEMTSEMMADALDDAFEGDEEEEETEELVSQVLDEIGIDINSELV 180
           +LQKIMQEFERQNEKMEMTSE+M DA+DDA EGDEEEEETEELV+QVLDEIGI IN+ELV
Sbjct: 121 SLQKIMQEFERQNEKMEMTSEVMGDAIDDALEGDEEEEETEELVNQVLDEIGIGINNELV 180

Query: 181 NAPSASVSVSTANNRVAQAEA----ED--TGIDSDLQARLDNLRKM 221
           NAPSA+VSV  A N+VAQAE+    ED   GID DLQARLDNLRKM
Sbjct: 181 NAPSAAVSVPAAKNKVAQAESTGNHEDGGGGIDDDLQARLDNLRKM 226

[Close]

BLAST of Cp4.1LG17g04670 vs. TrEMBL
Match: D7TCH9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g01440 PE=3 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.1e-93
Identity = 194/226 (85.84%), Postives = 211/226 (93.36%), Query Frame = 1


Query: 1   MSFLFGSRKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK 60
           MSFLFG +KTPAE+LRENKRMLDKSIREIERERQGLQ+QEKKLIVEIKK+AKQGQMGAVK
Sbjct: 1   MSFLFGKKKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLIVEIKKSAKQGQMGAVK 60

Query: 61  IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           +MAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMG+AMKGVTKAMGQMNRQMNLP
Sbjct: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGQAMKGVTKAMGQMNRQMNLP 120

Query: 121 ALQKIMQEFERQNEKMEMTSEMMADALDDAFEGDEEEEETEELVSQVLDEIGIDINSELV 180
           +LQKIMQEFERQNEKMEMT E+M DA+DDA EGDEEEEETEELVSQVLDEIGIDI SEL+
Sbjct: 121 SLQKIMQEFERQNEKMEMTMEVMGDAVDDALEGDEEEEETEELVSQVLDEIGIDIKSELL 180

Query: 181 NAPSASVSVSTANNRVAQAEA------EDTGIDSDLQARLDNLRKM 221
           NAPSA+V+   A N+VAQAEA      +D+GID+DLQARLDNLR+M
Sbjct: 181 NAPSAAVAAPAAKNKVAQAEATGTTGNDDSGIDNDLQARLDNLRRM 226

[Close]

BLAST of Cp4.1LG17g04670 vs. TrEMBL
Match: B9RK24_RICCO (Charged multivesicular body protein 2a, putative OS=Ricinus communis GN=RCOM_1045990 PE=3 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.5e-93
Identity = 193/223 (86.55%), Postives = 209/223 (93.72%), Query Frame = 1


Query: 1   MSFLFGSRKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK 60
           MSFLFG RKTPAE+LRENKRMLDKSIREIERERQGLQ+QEKKLI EIKK+AKQGQMGAVK
Sbjct: 1   MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVK 60

Query: 61  IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           +MAKDLIRTRHQIEKFYKLKSQLQGV+LRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
Sbjct: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120

Query: 121 ALQKIMQEFERQNEKMEMTSEMMADALDDAFEGDEEEEETEELVSQVLDEIGIDINSELV 180
           +LQKIMQEFERQNEKMEM +E+M DA+DDA EGDEEEEETEELVSQVLDEIGIDIN ELV
Sbjct: 121 SLQKIMQEFERQNEKMEMVTEVMGDAIDDALEGDEEEEETEELVSQVLDEIGIDINQELV 180

Query: 181 NAPSASVSVSTANNRVAQAEA---EDTGIDSDLQARLDNLRKM 221
           NAPS++V+   A  +VAQAEA   +D+GIDSDLQARLDNLR+M
Sbjct: 181 NAPSSAVAAPAAKGKVAQAEATGTDDSGIDSDLQARLDNLRRM 223

[Close]

BLAST of Cp4.1LG17g04670 vs. TAIR10
Match: AT2G06530.1 (AT2G06530.1 SNF7 family protein)

HSP 1 Score: 343.6 bits (880), Expect = 9.1e-95
Identity = 193/224 (86.16%), Postives = 207/224 (92.41%), Query Frame = 1


Query: 1   MSFLFGSRKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK 60
           M+ +FG RKTPAE+LRENKRMLDKSIREIERERQGLQ+QEKKLI EIKK AKQGQMGAVK
Sbjct: 2   MNSIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLINEIKKTAKQGQMGAVK 61

Query: 61  IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           +MAKDLIRTRHQIEKFYKLKSQLQGV+LRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
Sbjct: 62  VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 121

Query: 121 ALQKIMQEFERQNEKMEMTSEMMADALDDAFEGDEEEEETEELVSQVLDEIGIDINSELV 180
           +LQKIMQEFERQNEKMEM SE+M DA+DDA EGDEEEEETE+LVSQVLDEIGIDIN ELV
Sbjct: 122 SLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQELV 181

Query: 181 NAPSASVSVSTANNRVAQAE---AEDT-GIDSDLQARLDNLRKM 221
           NAPS +V+V  A N+V QAE   AED+ GIDSDLQARLDNLRKM
Sbjct: 182 NAPSGAVAVPAAKNKVVQAEATGAEDSGGIDSDLQARLDNLRKM 225

[Close]

BLAST of Cp4.1LG17g04670 vs. TAIR10
Match: AT1G03950.1 (AT1G03950.1 vacuolar protein sorting-associated protein 2.3)

HSP 1 Score: 155.2 bits (391), Expect = 4.6e-38
Identity = 93/215 (43.26%), Postives = 142/215 (66.05%), Query Frame = 1


Query: 4   LFGSRKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVKIMA 63
           +F  +  P E+LRE+KR + ++ R IE+E   LQS+EKKL++EIK+ AK G  GA KI+A
Sbjct: 3   IFTKKPNPREVLRESKREMTQATRGIEKEIGSLQSEEKKLVLEIKRTAKSGNEGATKILA 62

Query: 64  KDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPALQ 123
           + LIR R QI      ++Q++G+A   Q + +  ++   M+G TKAM  M++ M+     
Sbjct: 63  RQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAMAAMSKNMDPAKQA 122

Query: 124 KIMQEFERQNEKMEMTSEMMADALDDAFEGDEEEEETEELVSQVLDEIGIDINSELVNAP 183
           K+M+EF++Q+ +M+MT+EMM+D++DDA + DE E+ETE+L +QVLDEIGIDI S+L +AP
Sbjct: 123 KVMREFQKQSAQMDMTTEMMSDSIDDALDNDEAEDETEDLTNQVLDEIGIDIASQLSSAP 182

Query: 184 SASVSVSTANNRVAQAEAEDTGIDSDLQARLDNLR 219
              +    A       +   +GID +L+ RL  LR
Sbjct: 183 KGKIGGKKAE------DVGSSGID-ELEKRLAALR 210

[Close]

BLAST of Cp4.1LG17g04670 vs. TAIR10
Match: AT5G44560.1 (AT5G44560.1 SNF7 family protein)

HSP 1 Score: 143.3 bits (360), Expect = 1.8e-34
Identity = 87/221 (39.37%), Postives = 140/221 (63.35%), Query Frame = 1


Query: 4   LFGSRKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVKIMA 63
           +F  + TP + LR +KR +  + R IERE   LQ +EK+L+ EIKK AK G   A KI+A
Sbjct: 3   IFKKKTTPKDALRTSKREMAVATRGIEREITSLQLEEKRLVAEIKKTAKTGNEAATKILA 62

Query: 64  KDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPALQ 123
           + L+R R QI      ++Q++GV    Q L ++ ++   MKG TKAM  MN+QM      
Sbjct: 63  RQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTKQA 122

Query: 124 KIMQEFERQNEKMEMTSEMMADALDDAFEGDEEEEETEELVSQVLDEIGIDINSELVNAP 183
           K++++F++Q+ +++MT EMM++A+D+  + DE EEETE+L +QVLDEIG+ + S+L +AP
Sbjct: 123 KVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSSAP 182

Query: 184 SASVSVST----ANNRVAQAEAEDTGIDSDLQARLDNLRKM 221
              ++  T    A+       +E + +D +L+ RL +LR++
Sbjct: 183 KGRIATKTAAPPASTAATNKNSESSEVD-ELEKRLASLRRI 222

[Close]

BLAST of Cp4.1LG17g04670 vs. TAIR10
Match: AT5G22950.1 (AT5G22950.1 SNF7 family protein)

HSP 1 Score: 75.9 bits (185), Expect = 3.5e-14
Identity = 56/217 (25.81%), Postives = 118/217 (54.38%), Query Frame = 1


Query: 11  PAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVKIMAKDLIRTR 70
           P ++LR+ +R L +  R IER+ + +Q +E+ +   IK+ AK+  M + K +AK+++ +R
Sbjct: 14  PKQLLRDWQRKLRQECRNIERQIRDIQKEERNVQKAIKEAAKRNDMVSAKALAKEIVSSR 73

Query: 71  HQIEKFYKLKSQLQGVALRI-QTLKSTQAMGEAMKGVTKAMGQMNRQMNLPALQKIMQEF 130
             + + Y+ K+Q+  +++ + +++   + +G   K   + M  +N  M  P +   MQEF
Sbjct: 74  RTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKS-AEVMKLVNNLMKAPQMAATMQEF 133

Query: 131 ERQNEKMEMTSEMMADALDDAFEGDEEEEETEELVSQVLD--------EIGIDINSELVN 190
            ++  K  +  E + +A+D+A + ++ EEE +E V +VL         E+ + +  E + 
Sbjct: 134 SKEMTKAGVIEEFVNEAIDNALDSEDMEEEIDEEVDKVLTAIAGETAAELPVAVRKERIK 193

Query: 191 APSASVSVSTANNRVAQAEAEDTGIDSDLQARLDNLR 219
            P+   S S     VA+   ++  ++ +++ARL  +R
Sbjct: 194 VPAQKASTSREEEAVAEGVDDEEELE-EIRARLAKVR 228

[Close]

BLAST of Cp4.1LG17g04670 vs. TAIR10
Match: AT1G73030.1 (AT1G73030.1 SNF7 family protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.9e-07
Identity = 46/192 (23.96%), Postives = 90/192 (46.88%), Query Frame = 1


Query: 27  REIERERQGLQSQEKKLIVEIKKNAKQGQMGAVKIMAKDLIRTRHQIEKFYKLKSQLQGV 86
           + ++R+ +  + +EK   +++KK  ++G M   +I A++ IR R +   + +L S+L  V
Sbjct: 19  KSLQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIRKRSEQMNYLRLASRLDAV 78

Query: 87  ALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNEKMEMTSEMMADA 146
             R+ T      + ++M  + K++       NL  + + M  FE+Q   ME+ +E M +A
Sbjct: 79  VARLDTQAKMTTITKSMTNIVKSLESSLATGNLQKMSETMDSFEKQFVNMEVQAEFMENA 138

Query: 147 LDDAFEGDEEEEETEELVSQVLDEIGIDINSELVNAPSASVSVSTANNRVAQAEAEDTGI 206
           +  +      E E   L+ QV D+ G+++          SV +          + E+   
Sbjct: 139 MAGSTSLSTPEGEVNSLMQQVADDYGLEV----------SVGLPQPAGHAIPTKTEEKVD 198

Query: 207 DSDLQARLDNLR 219
           + DL  RL  L+
Sbjct: 199 EDDLSRRLAELK 200

[Close]

BLAST of Cp4.1LG17g04670 vs. NCBI nr
Match: gi|449447884|ref|XP_004141696.1| (PREDICTED: vacuolar protein sorting-associated protein 2 homolog 1-like [Cucumis sativus])

HSP 1 Score: 386.7 bits (992), Expect = 2.7e-104
Identity = 214/220 (97.27%), Postives = 219/220 (99.55%), Query Frame = 1


Query: 1   MSFLFGSRKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK 60
           MSFLFGSRKTPAE+LRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK
Sbjct: 1   MSFLFGSRKTPAELLRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK 60

Query: 61  IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMG+AMKGVTKAMGQMNRQMNLP
Sbjct: 61  IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGDAMKGVTKAMGQMNRQMNLP 120

Query: 121 ALQKIMQEFERQNEKMEMTSEMMADALDDAFEGDEEEEETEELVSQVLDEIGIDINSELV 180
           ALQKIMQEFERQNE+MEMTSE+MADALDDA EGDEEEEET+ELVSQVLDEIGIDINSELV
Sbjct: 121 ALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVSQVLDEIGIDINSELV 180

Query: 181 NAPSASVSVSTANNRVAQAEAEDTGIDSDLQARLDNLRKM 221
           NAPSASVSVSTANNRVAQAEAEDTGIDSDLQARLDNLRKM
Sbjct: 181 NAPSASVSVSTANNRVAQAEAEDTGIDSDLQARLDNLRKM 220

[Close]

BLAST of Cp4.1LG17g04670 vs. NCBI nr
Match: gi|659124728|ref|XP_008462317.1| (PREDICTED: vacuolar protein sorting-associated protein 2 homolog 1-like [Cucumis melo])

HSP 1 Score: 386.7 bits (992), Expect = 2.7e-104
Identity = 214/220 (97.27%), Postives = 219/220 (99.55%), Query Frame = 1


Query: 1   MSFLFGSRKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK 60
           MSFLFGSRKTPAE+LRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK
Sbjct: 1   MSFLFGSRKTPAELLRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK 60

Query: 61  IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
Sbjct: 61  IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120

Query: 121 ALQKIMQEFERQNEKMEMTSEMMADALDDAFEGDEEEEETEELVSQVLDEIGIDINSELV 180
           ALQKIMQEFERQNE+MEMTSE+MADALDDA EGDEEEEET+ELV+QVLDEIGIDINSELV
Sbjct: 121 ALQKIMQEFERQNERMEMTSEVMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELV 180

Query: 181 NAPSASVSVSTANNRVAQAEAEDTGIDSDLQARLDNLRKM 221
           NAPSASVSVSTANNRVAQAEAEDTGIDSDLQARLDNLRKM
Sbjct: 181 NAPSASVSVSTANNRVAQAEAEDTGIDSDLQARLDNLRKM 220

[Close]

BLAST of Cp4.1LG17g04670 vs. NCBI nr
Match: gi|747092091|ref|XP_011093797.1| (PREDICTED: vacuolar protein sorting-associated protein 2 homolog 1 [Sesamum indicum])

HSP 1 Score: 353.6 bits (906), Expect = 2.5e-94
Identity = 195/223 (87.44%), Postives = 211/223 (94.62%), Query Frame = 1


Query: 1   MSFLFGSRKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK 60
           MSFLFG RKTPAE+LRENKRMLDKSIREIERERQGLQ+QEKKLI EIKK+AKQGQMGAVK
Sbjct: 1   MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVK 60

Query: 61  IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           +MAKDLIRTRHQIEKFYKLKSQLQGV+LRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
Sbjct: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120

Query: 121 ALQKIMQEFERQNEKMEMTSEMMADALDDAFEGDEEEEETEELVSQVLDEIGIDINSELV 180
           +LQ+IMQEFERQNEKME+TSE+MADA+DDA EGDEEEEETEELVSQVLDEIGIDINSELV
Sbjct: 121 SLQRIMQEFERQNEKMELTSEVMADAIDDALEGDEEEEETEELVSQVLDEIGIDINSELV 180

Query: 181 NAPSASVSVSTANNRVAQAEA---EDTGIDSDLQARLDNLRKM 221
           NAPS++V+   A N+V QAEA   +D GIDSDLQARLDNLR+M
Sbjct: 181 NAPSSAVAAPAAKNKVPQAEATGNDDGGIDSDLQARLDNLRRM 223

[Close]

BLAST of Cp4.1LG17g04670 vs. NCBI nr
Match: gi|729319779|ref|XP_010533043.1| (PREDICTED: vacuolar protein sorting-associated protein 2 homolog 1 [Tarenaya hassleriana])

HSP 1 Score: 352.4 bits (903), Expect = 5.6e-94
Identity = 195/224 (87.05%), Postives = 208/224 (92.86%), Query Frame = 1


Query: 1   MSFLFGSRKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK 60
           MSF+FG RKTPAE+LRENKRMLDKSIREIERERQGLQ+QEKKLI EIKK AKQGQMGAVK
Sbjct: 1   MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKTAKQGQMGAVK 60

Query: 61  IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           +MAKDLIRTRHQIEKFYKLKSQLQGV+LRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
Sbjct: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120

Query: 121 ALQKIMQEFERQNEKMEMTSEMMADALDDAFEGDEEEEETEELVSQVLDEIGIDINSELV 180
           +LQKIMQEFERQNEKMEM SE+M DA+DDA EGDEEEEETEELVSQVLDEIGIDIN ELV
Sbjct: 121 SLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEELVSQVLDEIGIDINQELV 180

Query: 181 NAPSASVSVSTANNRVAQAEA----EDTGIDSDLQARLDNLRKM 221
           NAPSA+V+   A N+VAQAEA    +D GIDSDLQARLDNLR+M
Sbjct: 181 NAPSAAVAAPAAKNKVAQAEATGGNDDGGIDSDLQARLDNLRRM 224

[Close]

BLAST of Cp4.1LG17g04670 vs. NCBI nr
Match: gi|1021045416|gb|KZN03197.1| (hypothetical protein DCAR_011953 [Daucus carota subsp. sativus])

HSP 1 Score: 351.3 bits (900), Expect = 1.2e-93
Identity = 196/224 (87.50%), Postives = 211/224 (94.20%), Query Frame = 1


Query: 1   MSFLFGSRKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK 60
           MSF+FG RKTPAE+LRENKRM+DKSIREIERERQGLQ+QEKKLIV+IKK AKQGQMGAVK
Sbjct: 1   MSFIFGKRKTPAELLRENKRMIDKSIREIERERQGLQNQEKKLIVDIKKTAKQGQMGAVK 60

Query: 61  IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           +MAKDLIRTRHQIEKFYKLKSQLQGV+LRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
Sbjct: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120

Query: 121 ALQKIMQEFERQNEKMEMTSEMMADALDDAFEGDEEEEETEELVSQVLDEIGIDINSELV 180
           +LQKIMQEFERQNEKMEMTSE+MADA+DDA EGDEEEEETEELVSQVLDEIGIDINSELV
Sbjct: 121 SLQKIMQEFERQNEKMEMTSEVMADAIDDALEGDEEEEETEELVSQVLDEIGIDINSELV 180

Query: 181 NAPSASVSVSTANNRV-AQAEA---EDTGIDSDLQARLDNLRKM 221
           NAPSA+V+   A N+V AQAE    +D GIDSDLQARLDNLRK+
Sbjct: 181 NAPSATVAAPAAKNKVAAQAEVTGNDDGGIDSDLQARLDNLRKL 224

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g04670 vs. Swiss-Prot


Match Name	E-value	Identity	Description
VPS2A_ARATH	1.6e-93	86.16	Vacuolar protein sorting-associated protein 2 homolog 1 OS=Arabidopsis thaliana ...	[more]
CHM2A_XENLA	2.2e-58	56.16	Charged multivesicular body protein 2a OS=Xenopus laevis GN=chmp2a PE=2 SV=1	[more]
CHM2A_XENTR	4.9e-58	56.16	Charged multivesicular body protein 2a OS=Xenopus tropicalis GN=chmp2a PE=2 SV=1	[more]
CM2A2_DICDI	8.4e-58	64.92	Charged multivesicular body protein 2a homolog 2 OS=Dictyostelium discoideum GN=...	[more]
CHM2A_DANRE	9.3e-57	54.79	Charged multivesicular body protein 2a OS=Danio rerio GN=chmp2a PE=2 SV=1	[more]

BLAST of Cp4.1LG17g04670 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7U7_CUCSA	1.9e-104	97.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G450570 PE=3 SV=1	[more]
A0A161Y210_DAUCA	8.6e-94	87.50	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_011953 PE=4 SV=1	[more]
B9GKV8_POPTR	1.1e-93	87.17	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s17040g PE=3 SV=1	[more]
D7TCH9_VITVI	1.1e-93	85.84	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g01440 PE=3 SV=...	[more]
B9RK24_RICCO	1.5e-93	86.55	Charged multivesicular body protein 2a, putative OS=Ricinus communis GN=RCOM_104...	[more]

BLAST of Cp4.1LG17g04670 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G06530.1	9.1e-95	86.16	SNF7 family protein	[more]
AT1G03950.1	4.6e-38	43.26	vacuolar protein sorting-associated protein 2.3	[more]
AT5G44560.1	1.8e-34	39.37	SNF7 family protein	[more]
AT5G22950.1	3.5e-14	25.81	SNF7 family protein	[more]
AT1G73030.1	1.9e-07	23.96	SNF7 family protein	[more]

BLAST of Cp4.1LG17g04670 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449447884\|ref\|XP_004141696.1\|	2.7e-104	97.27	PREDICTED: vacuolar protein sorting-associated protein 2 homolog 1-like [Cucumis...	[more]
gi\|659124728\|ref\|XP_008462317.1\|	2.7e-104	97.27	PREDICTED: vacuolar protein sorting-associated protein 2 homolog 1-like [Cucumis...	[more]
gi\|747092091\|ref\|XP_011093797.1\|	2.5e-94	87.44	PREDICTED: vacuolar protein sorting-associated protein 2 homolog 1 [Sesamum indi...	[more]
gi\|729319779\|ref\|XP_010533043.1\|	5.6e-94	87.05	PREDICTED: vacuolar protein sorting-associated protein 2 homolog 1 [Tarenaya has...	[more]
gi\|1021045416\|gb\|KZN03197.1\|	1.2e-93	87.50	hypothetical protein DCAR_011953 [Daucus carota subsp. sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0007034	vacuolar transport

Vocabulary: **INTERPRO**
Term	Definition
IPR005024	Snf7_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0070676	intralumenal vesicle formation
biological_process	GO:0015031	protein transport
biological_process	GO:0010200	response to chitin
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0007034	vacuolar transport
cellular_component	GO:0000815	ESCRT III complex
cellular_component	GO:0005771	multivesicular body
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g04670.1	Cp4.1LG17g04670.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005024	Snf7 family	PFAM	PF03357	Snf7	coord: 17..186 score: 1.4
None	No IPR available	unknown	Coil	Coil	coord: 119..142 score: -coord: 12..46 scor
None	No IPR available	PANTHER	PTHR10476	CHARGED MULTIVESICULAR BODY PROTEIN	coord: 1..220 score: 1.5E
None	No IPR available	PANTHER	PTHR10476:SF12	SUBFAMILY NOT NAMED	coord: 1..220 score: 1.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG17g04670	Cucsa.360320	Cucumber (Gy14) v1	cgycpeB0937
Cp4.1LG17g04670	CmaCh17G006960	Cucurbita maxima (Rimu)	cmacpeB376
Cp4.1LG17g04670	CmaCh08G007910	Cucurbita maxima (Rimu)	cmacpeB916
Cp4.1LG17g04670	CmoCh08G007600	Cucurbita moschata (Rifu)	cmocpeB853
Cp4.1LG17g04670	CmoCh11G007320	Cucurbita moschata (Rifu)	cmocpeB103
Cp4.1LG17g04670	CmoCh17G006740	Cucurbita moschata (Rifu)	cmocpeB339
Cp4.1LG17g04670	Cla015555	Watermelon (97103) v1	cpewmB316
Cp4.1LG17g04670	Cla011177	Watermelon (97103) v1	cpewmB324
Cp4.1LG17g04670	Csa7G450570	Cucumber (Chinese Long) v2	cpecuB336
Cp4.1LG17g04670	MELO3C015505	Melon (DHL92) v3.5.1	cpemeB302
Cp4.1LG17g04670	MELO3C024361	Melon (DHL92) v3.5.1	cpemeB292
Cp4.1LG17g04670	ClCG09G000920	Watermelon (Charleston Gray)	cpewcgB284
Cp4.1LG17g04670	CSPI07G22620	Wild cucumber (PI 183967)	cpecpiB337
Cp4.1LG17g04670	Lsi02G029090	Bottle gourd (USVL1VR-Ls)	cpelsiB257
Cp4.1LG17g04670	MELO3C015505.2	Melon (DHL92) v3.6.1	cpemedB353
Cp4.1LG17g04670	MELO3C024361.2	Melon (DHL92) v3.6.1	cpemedB340
Cp4.1LG17g04670	CsaV3_7G034540	Cucumber (Chinese Long) v3	cpecucB0415
Cp4.1LG17g04670	Bhi02G001529	Wax gourd	cpewgoB0429
Cp4.1LG17g04670	Bhi09G000277	Wax gourd	cpewgoB0415
Cp4.1LG17g04670	CsGy7G020870	Cucumber (Gy14) v2	cgybcpeB924
Cp4.1LG17g04670	Carg09438	Silver-seed gourd	carcpeB1425
Cp4.1LG17g04670	Carg12972	Silver-seed gourd	carcpeB0137
Cp4.1LG17g04670	Carg13944	Silver-seed gourd	carcpeB0851

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG17g04670	Cp4.1LG12g09050	Cucurbita pepo (Zucchini)	cpecpeB157
Cp4.1LG17g04670	Cp4.1LG18g03280	Cucurbita pepo (Zucchini)	cpecpeB329

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG17g04670	Cucurbita moschata (Rifu)	cmocpeB231
Cp4.1LG17g04670	Bottle gourd (USVL1VR-Ls)	cpelsiB276
Cp4.1LG17g04670	Watermelon (Charleston Gray)	cpewcgB309
Cp4.1LG17g04670	Watermelon (97103) v1	cpewmB325
Cp4.1LG17g04670	Silver-seed gourd	carcpeB0173
Cp4.1LG17g04670	Cucurbita pepo (Zucchini)	cpecpeB334
Cp4.1LG17g04670	Cucurbita pepo (Zucchini)	cpecpeB332
Cp4.1LG17g04670	Cucurbita maxima (Rimu)	cmacpeB267