Cp4.1LG17g03990 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG17g03990
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Basic helix-loop-helix DNA-binding superfamily protein isoform 3
Location	Cp4.1LG17 : 2955564 .. 2957982 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCAGTGTGTTCCTAATTGGGACCTCTCCGCCTCCGCCGCTCCTCCCCCGTTCCACGCCTCCTCCGCCTCACACGACGTCGTTCCAACGTAAGCTCTCTTTTTCTCTCTCTATTATTTTTTAATGATTTTTTATTTTATTTTTGGATTTTGGGTTTTTTTATTTATTTATTTTTTATTTTATTTTTTTTTATTTTTGTAGGTTTGAGTATGAAGTAACGGAGCTCACATGGGAAAATGGGCAATTGGCTATGCATGGGTTGGGGTTGCCGAGGGTAACCGGGAAGATTCAGCACGGCGGCGGAGGAGGAGGAGGAGGTGGTGGTGGTGGTGGTTCTAAGAATACGTGGGATAATAAACCGGCACGTGCGAGTGGCACGCTTGAGTCTTTAGTGAACCAAGGAACTTGCCATGGTGAGATTATTGGTTTTAACGGCACCGATTTAGTGCCGTGGTTTTCCGACCACCACCGACAGACACTGCAAACGCCGGCGGCTATGGATGCGATGGTGCCGTGTGAAGCCGGCAAGGCGCCGGCGGAGTCGAGTGATATTCGCGTGGCAACGCGTGTGGAGAACGAGAAAGGTAGGATGGTTCACGGGAAAGGTGGGAGAGTGATGGCGCGTATGGTCCACTCGGGCACGGAAGGGAGTGGGTGTCGGAATCAGATGAAGGTGAGTGGAAACGCCGCCAAGTTCGGCGGGGAAAGCGGTAAGAAAGTGACGTCGGACACTCGCGATAGAGATTATTCCGTCGTTAGCGGAGGCGGCGGAGGATTGACCGTCACTACCGCCACGTCACAAGAATCGATGGATAATACGAGATCCGGCAAAATATGCATTAAAACCACCACCACCGCCGCCACTGACGACCGTGACTCCGTCTGCCATAGCACACATCAGGCAATATTTATTCTTTTTCGTAAAAAATTAAAATTATGTTGTTTTTAATATCAATTTGGTATTAAGAATTACGACTCTCCATAACGGTATGATACTGTTCGCTTTGAACATAAGCTCTGGTGCCTTTGCTTTAAGTTTACCAAAAGACCTCATACCAATGGAGATAGTATTATTCACTTATAAACCCACGATGATTTCCTAAATTAGCCAATGTGAGATTCACTCCCAATAATCTTCAAGGTTTGGGACAATTGTCTTCAGGTGGAAGAAGAAGACAGACATAAAGAGAATCCAAAATCATCTATTTCTACTAAAAGAAGTCGAGCTGCTGCAATCCATAATCAATCCGAACGGGTAACTTTTATTATTATTATTTTTTTTTATGGTAAATCTTTTTATTTATTTTACTTCAATTTTGTAGAAAAGGAGAGATAAGATTAACCAAAGGATGAAGACACTGCAAAAGCTGGTTCCAAATTCAAATAAGGTACACTTTTACAGTTATGATGAGAATATCATAACATCGTGGAGAGTCGTGATTTCTAATATGTTATTAGAGTCATACTCTTAACTTAATTATGTCAATAGAATCTTCAAATGTCGAACAAATAGAAAGGTGTAGTCAGAAGTGACTCAAGTGTCAAACAAATTGTGTACTTTGTTTTTTGTTCGAGGACTCCAAAGAATGAGTCGGAGGGTCTATAGTGAACTGAAAAGCCCAAAACAAAGCCACGAGAGTTTATGTTTAAAATGGGCAATCGTATCATTTTGGAGATGGGTGATTCCTAACACGACCATATTGTTTGACGAACACGACTCTCCACAATGATATGATATTGCCCATTTTAAGTCTAAGTTCTCGCGACTTTGCTTTGTGCTTCCCAAAAGCCCTCATCCCAATGGAGAGAGAATATTTTTTGTTTATAAATCCATTATCATTCCCTAAATTAGTAGACGTGGAATTTTCATCATCCAACACATATTACTTAATTATTATTAGACGGACAAAGCGTCGATGCTGGACGAAGTGATCGAATATTTGAAGCAATTACAAGCTCAAGTACAGATGATGAGCAGAGTGAACATGCCAATGATGGTGCCGATGGCACTGCATCAGCATCTCCCATTGGCATCGTTAATGAATATGCCAATGATGGGGATGGCGGGCATGGGAATGGGTCTAGGAATGGATCATCTAAACATGATTGCCAATCGCCCCGCCCTCGCCGCTGGAATGTCTCCGCTCCTTCACCCCACTGCCTTCATGCCCACCGCTGCATGGGACGGAGGCACCGCCGATCACATCCAACCTCTTCCGACCGACCCCCTATCCACATTCCTTGCATGTCAATCACAGGTCAATATTGAATTTAATATGATTCATTACTATTAATGCATCATTTAATACACTTTTTGTGTGTGTTTTCTTTGCAGCCGATGGCAATGGAAGCATATAACAGAATTGCTATGATGTTTCAACAACACCCCTCCATGGCGGGCGGCTCCAAGAATTAA

mRNA sequence

ATGAGTCAGTGTGTTCCTAATTGGGACCTCTCCGCCTCCGCCGCTCCTCCCCCGTTCCACGCCTCCTCCGCCTCACACGACGTCGTTCCAACGTTTGAGTATGAAGTAACGGAGCTCACATGGGAAAATGGGCAATTGGCTATGCATGGGTTGGGGTTGCCGAGGGTAACCGGGAAGATTCAGCACGGCGGCGGAGGAGGAGGAGGAGGTGGTGGTGGTGGTGGTTCTAAGAATACGTGGGATAATAAACCGGCACGTGCGAGTGGCACGCTTGAGTCTTTAGTGAACCAAGGAACTTGCCATGGTGAGATTATTGGTTTTAACGGCACCGATTTAGTGCCGTGGTTTTCCGACCACCACCGACAGACACTGCAAACGCCGGCGGCTATGGATGCGATGGTGCCGTGTGAAGCCGGCAAGGCGCCGGCGGAGTCGAGTGATATTCGCGTGGCAACGCGTGTGGAGAACGAGAAAGGTAGGATGGTTCACGGGAAAGGTGGGAGAGTGATGGCGCGTATGGTCCACTCGGGCACGGAAGGGAGTGGGTGTCGGAATCAGATGAAGGTGAGTGGAAACGCCGCCAAGTTCGGCGGGGAAAGCGGTAAGAAAGTGACGTCGGACACTCGCGATAGAGATTATTCCGTCGTTAGCGGAGGCGGCGGAGGATTGACCGTCACTACCGCCACGTCACAAGAATCGATGGATAATACGAGATCCGGCAAAATATGCATTAAAACCACCACCACCGCCGCCACTGACGACCGTGACTCCATGATGAGCAGAGTGAACATGCCAATGATGGTGCCGATGGCACTGCATCAGCATCTCCCATTGGCATCGTTAATGAATATGCCAATGATGGGGATGGCGGGCATGGGAATGGGTCTAGGAATGGATCATCTAAACATGATTGCCAATCGCCCCGCCCTCGCCGCTGGAATGTCTCCGCTCCTTCACCCCACTGCCTTCATGCCCACCGCTGCATGGGACGGAGGCACCGCCGATCACATCCAACCTCTTCCGACCGACCCCCTATCCACATTCCTTGCATGTCAATCACAGCCGATGGCAATGGAAGCATATAACAGAATTGCTATGATGTTTCAACAACACCCCTCCATGGCGGGCGGCTCCAAGAATTAA

Coding sequence (CDS)

ATGAGTCAGTGTGTTCCTAATTGGGACCTCTCCGCCTCCGCCGCTCCTCCCCCGTTCCACGCCTCCTCCGCCTCACACGACGTCGTTCCAACGTTTGAGTATGAAGTAACGGAGCTCACATGGGAAAATGGGCAATTGGCTATGCATGGGTTGGGGTTGCCGAGGGTAACCGGGAAGATTCAGCACGGCGGCGGAGGAGGAGGAGGAGGTGGTGGTGGTGGTGGTTCTAAGAATACGTGGGATAATAAACCGGCACGTGCGAGTGGCACGCTTGAGTCTTTAGTGAACCAAGGAACTTGCCATGGTGAGATTATTGGTTTTAACGGCACCGATTTAGTGCCGTGGTTTTCCGACCACCACCGACAGACACTGCAAACGCCGGCGGCTATGGATGCGATGGTGCCGTGTGAAGCCGGCAAGGCGCCGGCGGAGTCGAGTGATATTCGCGTGGCAACGCGTGTGGAGAACGAGAAAGGTAGGATGGTTCACGGGAAAGGTGGGAGAGTGATGGCGCGTATGGTCCACTCGGGCACGGAAGGGAGTGGGTGTCGGAATCAGATGAAGGTGAGTGGAAACGCCGCCAAGTTCGGCGGGGAAAGCGGTAAGAAAGTGACGTCGGACACTCGCGATAGAGATTATTCCGTCGTTAGCGGAGGCGGCGGAGGATTGACCGTCACTACCGCCACGTCACAAGAATCGATGGATAATACGAGATCCGGCAAAATATGCATTAAAACCACCACCACCGCCGCCACTGACGACCGTGACTCCATGATGAGCAGAGTGAACATGCCAATGATGGTGCCGATGGCACTGCATCAGCATCTCCCATTGGCATCGTTAATGAATATGCCAATGATGGGGATGGCGGGCATGGGAATGGGTCTAGGAATGGATCATCTAAACATGATTGCCAATCGCCCCGCCCTCGCCGCTGGAATGTCTCCGCTCCTTCACCCCACTGCCTTCATGCCCACCGCTGCATGGGACGGAGGCACCGCCGATCACATCCAACCTCTTCCGACCGACCCCCTATCCACATTCCTTGCATGTCAATCACAGCCGATGGCAATGGAAGCATATAACAGAATTGCTATGATGTTTCAACAACACCCCTCCATGGCGGGCGGCTCCAAGAATTAA

Protein sequence

MSQCVPNWDLSASAAPPPFHASSASHDVVPTFEYEVTELTWENGQLAMHGLGLPRVTGKIQHGGGGGGGGGGGGGSKNTWDNKPARASGTLESLVNQGTCHGEIIGFNGTDLVPWFSDHHRQTLQTPAAMDAMVPCEAGKAPAESSDIRVATRVENEKGRMVHGKGGRVMARMVHSGTEGSGCRNQMKVSGNAAKFGGESGKKVTSDTRDRDYSVVSGGGGGLTVTTATSQESMDNTRSGKICIKTTTTAATDDRDSMMSRVNMPMMVPMALHQHLPLASLMNMPMMGMAGMGMGLGMDHLNMIANRPALAAGMSPLLHPTAFMPTAAWDGGTADHIQPLPTDPLSTFLACQSQPMAMEAYNRIAMMFQQHPSMAGGSKN

Homology

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BLAST of Cp4.1LG17g03990 vs. Swiss-Prot
Match: UNE10_ARATH (Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.1e-24
Identity = 130/433 (30.02%), Postives = 186/433 (42.96%), Query Frame = 1


Query: 1   MSQCVPNWDLSASAAPPPFHASSASHDVVPTFEYEVTELTWENGQLAMHGLGLPRVTGKI 60
           MSQCVPN  +  + A       S +   +P  +YEV ELTWENGQL +HGLG PRVT   
Sbjct: 1   MSQCVPNCHIDDTPAAATTTVRSTTAADIPILDYEVAELTWENGQLGLHGLGPPRVTASS 60

Query: 61  QHGGGGGGGGGGGGGSKNTWDNKPARASGTLESLVNQGTCHGEIIGFNGTD-LVPWFSDH 120
                G G                    GTLES+V+Q T    +     TD LVPWF  H
Sbjct: 61  TKYSTGAG--------------------GTLESIVDQAT---RLPNPKPTDELVPWF--H 120

Query: 121 HRQTLQTPAAMDAMVPCEAGKAPAESSDIRVATRVENEKGRMVHGKGGRVMARMVHSGTE 180
           HR + +   AMDA+VPC               + + +E+     G G   +       T 
Sbjct: 121 HRSS-RAAMAMDALVPC---------------SNLVHEQQSKPGGVGSTRVGSCSDGRTM 180

Query: 181 GSGCRNQMKVSGNAAKFGGESGKKVTSDTRDRDYSVVSGGGGGLTV----TTATSQESMD 240
           G G R ++     A ++ G   +++T DT D  ++  S G    T+    +   S+  M+
Sbjct: 181 GGGKRARV-----APEWSGGGSQRLTMDTYDVGFTSTSMGSHDNTIDDHDSVCHSRPQME 240

Query: 241 NTR----SGKICIKTTTTAAT--------DDRDSMMSRV-NMPMMVPMA----------- 300
           +       GK  + T  + A           RD +  R+  +  +VP +           
Sbjct: 241 DEEEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDE 300

Query: 301 -------LHQHLPLASLMNMP--MMGMA----------------GMGMGLGMDHLNMI-A 360
                  L   + + S MNMP  M+ MA                G+GMG+GM  L ++  
Sbjct: 301 VIEYLKQLQAQVSMMSRMNMPSMMLPMAMQQQQQLQMSLMSNPMGLGMGMGMPGLGLLDL 360

Query: 361 NRPALAAGMSPLLH----PTAFMP--TAAWDGGTAD--HIQPLPTDPLSTFLACQSQPMA 371
           N    AA  +P +H    P  F+P    +WD  + D     PL  DP+S FLAC +QP  
Sbjct: 361 NSMNRAAASAPNIHANMMPNPFLPMNCPSWDASSNDSRFQSPLIPDPMSAFLACSTQPTT 387

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BLAST of Cp4.1LG17g03990 vs. TrEMBL
Match: A0A0A0KCL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108570 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.4e-70
Identity = 166/282 (58.87%), Postives = 194/282 (68.79%), Query Frame = 1


Query: 1   MSQCVPNWDLS------ASAAPPPFHASSASHDVVPTFEYEVTELTWENGQLAMHGLGLP 60
           MSQCVPNWDLS      A+A  PPF +SS++ DVVP FEYEV ELTWENGQL+MHGLGLP
Sbjct: 1   MSQCVPNWDLSEPPPSSAAAGRPPFQSSSSADDVVPLFEYEVAELTWENGQLSMHGLGLP 60

Query: 61  RVTGKIQHGGGGGGGGGGGGGSKNTWDNKPARASGTLESLVNQGTCHGE-IIGFN----- 120
           RVTGKIQ+      GGGGG GSK TWDNKPARASGTLESLVNQGT HG+  I F+     
Sbjct: 61  RVTGKIQN-----SGGGGGVGSKYTWDNKPARASGTLESLVNQGTRHGKNNISFDINTDD 120

Query: 121 -----GTDLVPWFSDHHRQTLQTPAAMDAMVPCEAGKAPA------ESSDIRVATRVENE 180
                  DLVPWFSDHHRQT  T +  DAMVPC+  K+        +SSDI VA R E+E
Sbjct: 121 TSHGGANDLVPWFSDHHRQT-PTASTADAMVPCDGEKSATVGGGGDKSSDIPVAARKEDE 180

Query: 181 KGRMVHGKGGRVMARMVHSGTEGSGCRNQMKVSGNAAKFGGESGKKVT-SDTRDRDYSVV 240
             R++HGK G+V+AR+VH+  E S CRNQ+ VSGN      ESG+KVT + +RDR++  V
Sbjct: 181 DCRVIHGKRGKVVARVVHAEGEWSSCRNQISVSGNR-----ESGQKVTLNSSRDRNFVAV 240

Query: 241 SGGGGGLTVTTATSQESMDNTRSGKICIKTTTTAATDDRDSM 259
                G T TTATSQ S+DNT S K C+K TT   TDD DS+
Sbjct: 241 D-VSVGFTATTATSQGSLDNTSSDKPCVKNTTVTTTDDHDSV 270

[Close]

BLAST of Cp4.1LG17g03990 vs. TrEMBL
Match: A0A0B2SW75_GLYSO (Transcription factor UNE10 OS=Glycine soja GN=glysoja_049467 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 5.2e-46
Identity = 183/452 (40.49%), Postives = 224/452 (49.56%), Query Frame = 1


Query: 1   MSQCVPNWDLSASAAPPPFHASSASHDV-----VPTFEYEVTELTWENGQLAMHGLGLPR 60
           MSQCVP+WD+  +  PPP   S  S+       VP  +YEV ELTWENGQL+MHGLGLPR
Sbjct: 1   MSQCVPSWDVEDN--PPPSRVSLRSNSNSTAPDVPMLDYEVAELTWENGQLSMHGLGLPR 60

Query: 61  VTGKIQHGGGGGGGGGGGGGSKNTWDNKPARASGTLESLVNQGTCH-------------G 120
           V  K                +K TW+ KP R SGTLES+VNQ T               G
Sbjct: 61  VPVKPPTAAT----------NKYTWE-KP-RGSGTLESIVNQATSFSHQEKPRPLNGDSG 120

Query: 121 EIIGFNGTDLVPWFSDHHRQTLQTPAA----MDAMVPC---EAGKAPAESSD-----IRV 180
              G  G  +VPWF  H   T  T       MDA+VPC   E GK            +  
Sbjct: 121 GGGGVYGNFMVPWFDPHAAATTTTTTTNTMTMDALVPCSNREQGKKKGMEPGPGTCMVGC 180

Query: 181 ATRVENEKGRMVHGKGGRVMARMVHSGTEGSGCRNQMKVSGNAAKFGGESGKKVTSDTRD 240
           +TRV    G    GKG +        G E SG R+Q  VSG+A  FG +S K VT DT D
Sbjct: 181 STRV----GSCCGGKGAK--------GHEASG-RDQ-SVSGSAT-FGRDS-KHVTLDTCD 240

Query: 241 RDYSVVSGGGGGLTVTTATSQESMDNTRSGKICIKTTTTAATD---------DRDSM--- 300
           R++ V           T+TS  S++NT   K C KTTT    D         D+ SM   
Sbjct: 241 REFGVAF---------TSTSINSLENTSYAKHCTKTTTIEEHDSVSHSKPMTDKASMLDE 300

Query: 301 --------------MSRVNMP-MMVPMALHQHLPLASLMNMPM---MGMAGMGMGLGMDH 360
                         M+R+NM  MM+P+ + Q L ++ +  M M   MGM GMGMG+GMD 
Sbjct: 301 VIEYLKQLQAQVQMMNRINMSSMMLPLTMQQQLQMSMMSPMGMGLGMGM-GMGMGMGMDM 360

Query: 361 LNMIANRPALAAGMSPLLHPTAFMPTAA-WD------GGTADHIQPLPT----DPLSTFL 381
            +M  NR A   G+ P+LHP+AFMP AA WD       G  D +Q  P     DPLST  
Sbjct: 361 NSM--NR-ANIPGIPPVLHPSAFMPMAASWDAAAAAAAGGGDRLQGTPASVMPDPLSTIF 409

[Close]

BLAST of Cp4.1LG17g03990 vs. TrEMBL
Match: A0A103XI80_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_006776 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 9.2e-35
Identity = 160/459 (34.86%), Postives = 211/459 (45.97%), Query Frame = 1


Query: 1   MSQCVPNWDL---------SASAAPPPFHASS---ASHDVVPTFEYEVTELTWENGQLAM 60
           MS CVP+WD          +     P   ASS   +SH   P  +Y V ELTW+NGQLAM
Sbjct: 1   MSHCVPSWDTLDDYPDRNPNPGYRKPDLRASSNSMSSHLDAPILDYAVAELTWKNGQLAM 60

Query: 61  HGLGLPRVTGKIQHGGGGGGGGGGGGGSKNTWDNKPARASGTLESLVNQGTC---HGEII 120
           HGLG PRV  K                +K TWD KP RA+ TLES+VNQ T    H   +
Sbjct: 61  HGLGPPRVVNKPH--------ATAATLTKYTWD-KP-RAAETLESIVNQATLPPNHKPQM 120

Query: 121 GFNGT-DLVPWFSDHHRQTL------QTPAAMDAMVPCEAGKAPAES--SDI---RVATR 180
              G  DLVPW       T            MDA+VP    + PA S  S +   R +TR
Sbjct: 121 HIYGAGDLVPWLDHQSSATAAGSFSASVTMTMDALVPSSNAQPPAASLRSGVGAGRCSTR 180

Query: 181 VENEKG--------RMVHGKGGRVMARMVHSGTEGSGCRNQMKVSGNAAKFGGESGKKVT 240
           V +  G        R+  G GG   A   H   E S CR+Q   +  +A FG ES +++T
Sbjct: 181 VASCSGDQSGFVDQRIRGGGGGTAAATATH---EWSSCRDQS--ASGSANFGMESSRQLT 240

Query: 241 SDTRDR-----DYSVVSGGG-----GGLTVTTATS------------QESMDNTRSGK-- 300
            +T +R      ++  S G       G   T +TS            Q +M+  + GK  
Sbjct: 241 VETCERELGVKGFTSTSMGSPENTTSGKRSTKSTSPDEQDSVCHSKPQSNMEEKKKGKGK 300

Query: 301 --ICIKTTTTAATDD----------RDSMMSRVNM-PMMVPMALHQHLPLASLMNMPMMG 360
             I  K    +  D+          +  MMSR+NM PMM+P+A+ Q   +   M  PM  
Sbjct: 301 SSISTKRNKASMLDEVIEYLKQLQAQIHMMSRMNMSPMMMPLAMQQQQQIQMAMMNPMGM 360

Query: 361 MAGMGMGLGMD---HLNMIANRPALAAGMSPLLHPTAFM--PTAAWDGGTADHIQPLPTD 381
             GMG+G+GM     LN I    +   G+ P+ HP  FM  P A+WD  T       P D
Sbjct: 361 GIGMGIGMGMPGVMDLNAIGGNRSNIPGIPPVFHPATFMQTPMASWDMHTGGDRVTNPND 420

[Close]

BLAST of Cp4.1LG17g03990 vs. TrEMBL
Match: A0A0D2T406_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G106900 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 6.2e-31
Identity = 146/434 (33.64%), Postives = 194/434 (44.70%), Query Frame = 1


Query: 1   MSQCVPNWDLSASAAPPP------FHASSASHDVVPTFEYEVTELTWENGQLAMHGLGLP 60
           MSQCVP+W+L  +           F+++S + DV P  +YEV ELTWENGQLAMH LG P
Sbjct: 1   MSQCVPSWELDDNNPLTTRHHSFRFNSNSTAPDV-PMLDYEVAELTWENGQLAMHSLGPP 60

Query: 61  RVTGKIQHGGGGGGGGGGGGGSKNTWDNKPARASG--TLESLVNQGTCHG----EIIGFN 120
           RV  K  +                TWD   A   G  TLES+VNQ TC      + +G  
Sbjct: 61  RVVAKQLNA--------------TTWDKPRASGGGGGTLESIVNQATCFPYGSKDSVGAG 120

Query: 121 GTDLVPWFSDHHRQTLQTPA-----AMDAMVPCEAGKAPAESSDIRVATRVENEKGRMVH 180
           G +LV W  DHHR +    +     AMDA+VPC   K    ++ +  +       G  + 
Sbjct: 121 GDELV-WL-DHHRVSAAASSSSATMAMDALVPCSEDKTT--TAHVLESMPGLGGGGTCMM 180

Query: 181 GKGGRVMARMVHSGTEGSGCRNQMKVSG-------------NAAKFGGESGKKVTSDTRD 240
           G   RV +      T+    R + K  G              +A FG +S + VT DT D
Sbjct: 181 GCSTRVGSCSGTVNTQDDVTRKREKAVGVQVAPPEWEQSASASATFGRDSHRNVTVDTYD 240

Query: 241 RDYSV----VSGGGGGLTVTTA---------------TSQESMDNTRSGKICIKTTTTAA 300
           +D+ V    +S G    T T                 T +E    T    I  K +  AA
Sbjct: 241 KDFGVGFTSISHGSIENTKTATDNDHDSASHSKPQEETGEEDKKETMKSSISTKRSRAAA 300

Query: 301 TD------DRDSMMSRV-----NMPMMVPMALHQHLPLASLMNMPMMGM-AGMGMGLGMD 360
                   D+ SM+  V      +   V M    +LP   L     M M A MGMG+ + 
Sbjct: 301 IHNQSERTDKASMLDEVIEYLKQLQAQVQMMNRMNLPSMMLQQQLQMSMMAPMGMGMSVM 360

Query: 361 HLNMIANRPALAAGMSPLLHPTAFMPTAAWDGGTA-DHIQPLP--TDPLSTFLACQSQPM 371
            +N +  RP +  G+SP+L          WDG    D +Q     TDPLSTFLACQSQPM
Sbjct: 361 DMNFMG-RPNII-GISPVLSNPFMTMNTPWDGSNNNDRLQQAASMTDPLSTFLACQSQPM 413

[Close]

BLAST of Cp4.1LG17g03990 vs. TrEMBL
Match: A0A087GL32_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA6G000800 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.4e-29
Identity = 141/413 (34.14%), Postives = 183/413 (44.31%), Query Frame = 1


Query: 1   MSQCVPNWDLSASAAPPPFHASSASHDVVPTFEYEVTELTWENGQLAMHGLGLPRVTGKI 60
           MSQ VPN  +     P     S+ + D+ P  +YEV ELTWENGQLA+HGLG PRV    
Sbjct: 1   MSQRVPNCHVDD--VPVATVVSTTAADIHPMLDYEVAELTWENGQLALHGLGPPRVPAPS 60

Query: 61  QHGGGGGGGGGGGGGSKNTWDNKPARASGTLESLVNQGTCHGEIIGFNGTDLVPWFSDHH 120
           ++  G G                     GTLES+V+Q T           +LVPWF  HH
Sbjct: 61  KYSAGAG---------------------GTLESIVDQATRLPHPKRKATDELVPWF--HH 120

Query: 121 RQTLQTPAAMDAMVPCEAGKAPAESSDIRVATRVENEKGRMVHGKGGRVMARMVHSGTEG 180
           R +      MDA+VPC     PA     RV +  +     MV GK GRV A    SG++ 
Sbjct: 121 RSS----TTMDALVPCFNLPEPARVGSTRVGSCSDGRS--MVGGKRGRVAAEWSASGSQ- 180

Query: 181 SGCRNQMKVSGNAA----KFGGESGKKVTSDTR---DRDYSVVSGGGGGLTVT----TAT 240
              R  M   G  A    +    SGK  T  T    D DY     GG    +T     A 
Sbjct: 181 ---RLTMDTCGFTATSLDENSSSSGKPCTKTTTLFDDHDYMEEETGGKSSVLTKRSRAAA 240

Query: 241 SQESMDNTRSGKI-------------CIKTTTTAATDD----------RDSMMSRVNMP- 300
                +  R  KI               KT   +  D+          + SMM R+NMP 
Sbjct: 241 IHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMGRMNMPS 300

Query: 301 MMVPMALHQHLPLASLMNMPMMGMAGMGMGLGMDHL----NMIANRPALAAGMSPLLHPT 360
           MM+PMA+ Q      L    M    G+G+G+GM  L    +M    P L A M P  +P 
Sbjct: 301 MMLPMAMQQQQQQQQLQLSLMSNPMGLGIGMGMPGLLDLNSMNRTAPNLHANMMP--NPF 360

Query: 361 AFM-PTAAWDGGTADHIQ---PLPTDPLSTFLACQSQPMAMEAYNRIAMMFQQ 371
             M P  +WD  +++  +   PL  DP++ FLAC SQP  +EAY+R+A M+QQ
Sbjct: 361 VPMPPPPSWDASSSNETRFHSPLMPDPMAAFLACSSQPATIEAYSRMAAMYQQ 376

[Close]

BLAST of Cp4.1LG17g03990 vs. TAIR10
Match: AT4G00050.1 (AT4G00050.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 114.8 bits (286), Expect = 1.2e-25
Identity = 130/433 (30.02%), Postives = 186/433 (42.96%), Query Frame = 1


Query: 1   MSQCVPNWDLSASAAPPPFHASSASHDVVPTFEYEVTELTWENGQLAMHGLGLPRVTGKI 60
           MSQCVPN  +  + A       S +   +P  +YEV ELTWENGQL +HGLG PRVT   
Sbjct: 1   MSQCVPNCHIDDTPAAATTTVRSTTAADIPILDYEVAELTWENGQLGLHGLGPPRVTASS 60

Query: 61  QHGGGGGGGGGGGGGSKNTWDNKPARASGTLESLVNQGTCHGEIIGFNGTD-LVPWFSDH 120
                G G                    GTLES+V+Q T    +     TD LVPWF  H
Sbjct: 61  TKYSTGAG--------------------GTLESIVDQAT---RLPNPKPTDELVPWF--H 120

Query: 121 HRQTLQTPAAMDAMVPCEAGKAPAESSDIRVATRVENEKGRMVHGKGGRVMARMVHSGTE 180
           HR + +   AMDA+VPC               + + +E+     G G   +       T 
Sbjct: 121 HRSS-RAAMAMDALVPC---------------SNLVHEQQSKPGGVGSTRVGSCSDGRTM 180

Query: 181 GSGCRNQMKVSGNAAKFGGESGKKVTSDTRDRDYSVVSGGGGGLTV----TTATSQESMD 240
           G G R ++     A ++ G   +++T DT D  ++  S G    T+    +   S+  M+
Sbjct: 181 GGGKRARV-----APEWSGGGSQRLTMDTYDVGFTSTSMGSHDNTIDDHDSVCHSRPQME 240

Query: 241 NTR----SGKICIKTTTTAAT--------DDRDSMMSRV-NMPMMVPMA----------- 300
           +       GK  + T  + A           RD +  R+  +  +VP +           
Sbjct: 241 DEEEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDE 300

Query: 301 -------LHQHLPLASLMNMP--MMGMA----------------GMGMGLGMDHLNMI-A 360
                  L   + + S MNMP  M+ MA                G+GMG+GM  L ++  
Sbjct: 301 VIEYLKQLQAQVSMMSRMNMPSMMLPMAMQQQQQLQMSLMSNPMGLGMGMGMPGLGLLDL 360

Query: 361 NRPALAAGMSPLLH----PTAFMP--TAAWDGGTAD--HIQPLPTDPLSTFLACQSQPMA 371
           N    AA  +P +H    P  F+P    +WD  + D     PL  DP+S FLAC +QP  
Sbjct: 361 NSMNRAAASAPNIHANMMPNPFLPMNCPSWDASSNDSRFQSPLIPDPMSAFLACSTQPTT 387

[Close]

BLAST of Cp4.1LG17g03990 vs. NCBI nr
Match: gi|659119567|ref|XP_008459727.1| (PREDICTED: transcription factor UNE10 [Cucumis melo])

HSP 1 Score: 284.6 bits (727), Expect = 2.5e-73
Identity = 171/282 (60.64%), Postives = 197/282 (69.86%), Query Frame = 1


Query: 1   MSQCVPNWDLS------ASAAPPPFHASSASHDVVPTFEYEVTELTWENGQLAMHGLGLP 60
           MSQCVPNWDLS      A+   PPFH+SSA+ DVVP FEYEV ELTWENGQLAMHGLGLP
Sbjct: 1   MSQCVPNWDLSEPPPSSAATGRPPFHSSSAADDVVPLFEYEVAELTWENGQLAMHGLGLP 60

Query: 61  RVTGKIQHGGGGGGGGGGGGGSKNTWDNKPARASGTLESLVNQGTCHGE-IIGFN----- 120
           RVTGK+Q+   GGGGGGGG GSK TWDNKPARASGTLESLVNQGT HG+  I F+     
Sbjct: 61  RVTGKVQN--SGGGGGGGGVGSKFTWDNKPARASGTLESLVNQGTRHGKNNISFDINTDD 120

Query: 121 -----GTDLVPWFSDHHRQTLQTPAAMDAMVPCE------AGKAPAESSDIRVATRVENE 180
                  DL PWFSDHHRQT  T +  DAMVPC+      AG + A+SSDI V  R E+E
Sbjct: 121 TAHGGANDLAPWFSDHHRQT-TTASTADAMVPCDGDKSATAGGSAAKSSDIPVVAREEDE 180

Query: 181 KGRMVHGKGGRVMARMVHSGTEGSGCRNQMKVSGNAAKFGGESGKKVT-SDTRDRDYSVV 240
              ++HGK GRV+AR+VH+  E S CRNQ+ VSGN      ESG+KVT + TR R+++ V
Sbjct: 181 DCGVIHGKRGRVVARVVHASGEWSTCRNQISVSGNR-----ESGQKVTLNSTRVRNFAAV 240

Query: 241 SGGGGGLTVTTATSQESMDNTRSGKICIKTTTTAATDDRDSM 259
             G  G T TTATSQ S+DNT S K C+K TT   TDD DS+
Sbjct: 241 D-GSVGFTATTATSQGSLDNTTSDKPCVKNTTVTTTDDHDSV 273

[Close]

BLAST of Cp4.1LG17g03990 vs. NCBI nr
Match: gi|778712228|ref|XP_011656866.1| (PREDICTED: transcription factor UNE10 [Cucumis sativus])

HSP 1 Score: 275.0 bits (702), Expect = 1.9e-70
Identity = 166/282 (58.87%), Postives = 194/282 (68.79%), Query Frame = 1


Query: 1   MSQCVPNWDLS------ASAAPPPFHASSASHDVVPTFEYEVTELTWENGQLAMHGLGLP 60
           MSQCVPNWDLS      A+A  PPF +SS++ DVVP FEYEV ELTWENGQL+MHGLGLP
Sbjct: 1   MSQCVPNWDLSEPPPSSAAAGRPPFQSSSSADDVVPLFEYEVAELTWENGQLSMHGLGLP 60

Query: 61  RVTGKIQHGGGGGGGGGGGGGSKNTWDNKPARASGTLESLVNQGTCHGE-IIGFN----- 120
           RVTGKIQ+      GGGGG GSK TWDNKPARASGTLESLVNQGT HG+  I F+     
Sbjct: 61  RVTGKIQN-----SGGGGGVGSKYTWDNKPARASGTLESLVNQGTRHGKNNISFDINTDD 120

Query: 121 -----GTDLVPWFSDHHRQTLQTPAAMDAMVPCEAGKAPA------ESSDIRVATRVENE 180
                  DLVPWFSDHHRQT  T +  DAMVPC+  K+        +SSDI VA R E+E
Sbjct: 121 TSHGGANDLVPWFSDHHRQT-PTASTADAMVPCDGEKSATVGGGGDKSSDIPVAARKEDE 180

Query: 181 KGRMVHGKGGRVMARMVHSGTEGSGCRNQMKVSGNAAKFGGESGKKVT-SDTRDRDYSVV 240
             R++HGK G+V+AR+VH+  E S CRNQ+ VSGN      ESG+KVT + +RDR++  V
Sbjct: 181 DCRVIHGKRGKVVARVVHAEGEWSSCRNQISVSGNR-----ESGQKVTLNSSRDRNFVAV 240

Query: 241 SGGGGGLTVTTATSQESMDNTRSGKICIKTTTTAATDDRDSM 259
                G T TTATSQ S+DNT S K C+K TT   TDD DS+
Sbjct: 241 D-VSVGFTATTATSQGSLDNTSSDKPCVKNTTVTTTDDHDSV 270

[Close]

BLAST of Cp4.1LG17g03990 vs. NCBI nr
Match: gi|734438381|gb|KHN49105.1| (Transcription factor UNE10 [Glycine soja])

HSP 1 Score: 193.4 bits (490), Expect = 7.4e-46
Identity = 183/452 (40.49%), Postives = 224/452 (49.56%), Query Frame = 1


Query: 1   MSQCVPNWDLSASAAPPPFHASSASHDV-----VPTFEYEVTELTWENGQLAMHGLGLPR 60
           MSQCVP+WD+  +  PPP   S  S+       VP  +YEV ELTWENGQL+MHGLGLPR
Sbjct: 1   MSQCVPSWDVEDN--PPPSRVSLRSNSNSTAPDVPMLDYEVAELTWENGQLSMHGLGLPR 60

Query: 61  VTGKIQHGGGGGGGGGGGGGSKNTWDNKPARASGTLESLVNQGTCH-------------G 120
           V  K                +K TW+ KP R SGTLES+VNQ T               G
Sbjct: 61  VPVKPPTAAT----------NKYTWE-KP-RGSGTLESIVNQATSFSHQEKPRPLNGDSG 120

Query: 121 EIIGFNGTDLVPWFSDHHRQTLQTPAA----MDAMVPC---EAGKAPAESSD-----IRV 180
              G  G  +VPWF  H   T  T       MDA+VPC   E GK            +  
Sbjct: 121 GGGGVYGNFMVPWFDPHAAATTTTTTTNTMTMDALVPCSNREQGKKKGMEPGPGTCMVGC 180

Query: 181 ATRVENEKGRMVHGKGGRVMARMVHSGTEGSGCRNQMKVSGNAAKFGGESGKKVTSDTRD 240
           +TRV    G    GKG +        G E SG R+Q  VSG+A  FG +S K VT DT D
Sbjct: 181 STRV----GSCCGGKGAK--------GHEASG-RDQ-SVSGSAT-FGRDS-KHVTLDTCD 240

Query: 241 RDYSVVSGGGGGLTVTTATSQESMDNTRSGKICIKTTTTAATD---------DRDSM--- 300
           R++ V           T+TS  S++NT   K C KTTT    D         D+ SM   
Sbjct: 241 REFGVAF---------TSTSINSLENTSYAKHCTKTTTIEEHDSVSHSKPMTDKASMLDE 300

Query: 301 --------------MSRVNMP-MMVPMALHQHLPLASLMNMPM---MGMAGMGMGLGMDH 360
                         M+R+NM  MM+P+ + Q L ++ +  M M   MGM GMGMG+GMD 
Sbjct: 301 VIEYLKQLQAQVQMMNRINMSSMMLPLTMQQQLQMSMMSPMGMGLGMGM-GMGMGMGMDM 360

Query: 361 LNMIANRPALAAGMSPLLHPTAFMPTAA-WD------GGTADHIQPLPT----DPLSTFL 381
            +M  NR A   G+ P+LHP+AFMP AA WD       G  D +Q  P     DPLST  
Sbjct: 361 NSM--NR-ANIPGIPPVLHPSAFMPMAASWDAAAAAAAGGGDRLQGTPASVMPDPLSTIF 409

[Close]

BLAST of Cp4.1LG17g03990 vs. NCBI nr
Match: gi|698492252|ref|XP_009792484.1| (PREDICTED: transcription factor UNE10 isoform X4 [Nicotiana sylvestris])

HSP 1 Score: 172.6 bits (436), Expect = 1.4e-39
Identity = 158/446 (35.43%), Postives = 213/446 (47.76%), Query Frame = 1


Query: 1   MSQCVPNWDLSASAAPPPFHASSASHDV---VPTFEYEVTELTWENGQLAMHGLGLPRVT 60
           M+QCVP+W+L  ++ PP     + S+ +   VP+ +YEV ELTWENGQLAMHGLG PRV 
Sbjct: 1   MNQCVPSWELEDTSTPPKLPLQTQSNSLAPGVPSLDYEVAELTWENGQLAMHGLGPPRVP 60

Query: 61  GKIQHGGGGGGGGGGGGGSKNTWDNKP-ARASGTLESLVNQGTC----HGEIIGFNGT-- 120
                                  +NKP +   GTLES+VNQGT     H +    NG+  
Sbjct: 61  -----------------------NNKPISNYGGTLESIVNQGTRSIPHHHQKSALNGSGH 120

Query: 121 ---DLVPWFSDHH--RQTLQTPA----AMDAMVPCEAGK--APAESSDIRV-----ATRV 180
              ++VPWF+ +H    T   P     A DA+VPC A         S ++V     +T V
Sbjct: 121 GCDEVVPWFNYNHVVADTPLVPGLLTMAKDALVPCSANSNYQNRPPSSVQVPGLDGSTHV 180

Query: 181 ENEKGRMVHGKGGRVMARMVHSGTEGSGCRNQMKVSGNAAKFGGESGKKVTSDTRDRDYS 240
            +      + +    + R+    T     R  M VSG+A   G    +++T DT DR+  
Sbjct: 181 GSCSTGATNSRDWMAVPRVRMEPTHEWSSRADMSVSGSATCAG--DSRQLTVDTYDREM- 240

Query: 241 VVSGGGGGLTVTTATSQESMDNTRSGKICIKTTTTAATDDRDS----------------- 300
                  G  + T+TS  S +NT S K C    T    DD DS                 
Sbjct: 241 -------GTGMYTSTSMGSPENTSSDKQC----TNRTGDDHDSVCHSRSKTDKASMLDEV 300

Query: 301 ------------MMSRVNMP--MMVPMALHQHLPLASLMNMPM-MGMAGMGMGLGMDHLN 360
                       MMSR+NM   MM+P+A+ Q L + S+M  PM MGM GMGMG+GM  + 
Sbjct: 301 IEYLKQLQSQVNMMSRMNMSPAMMLPLAMQQQLQM-SMMAAPMGMGM-GMGMGMGMTGVA 360

Query: 361 MIANRPALA----AGMSPLLHPTA-----FM-PTAAWDGGTADHIQPLPTDPLSTFLACQ 379
            + +   L+     G+ P LHPTA     FM P  +WDG T         DPL+  LACQ
Sbjct: 361 GVLDINTLSRPNITGLPPFLHPTAAAAAAFMQPMTSWDGSTDRLNAAAVPDPLAALLACQ 407

[Close]

BLAST of Cp4.1LG17g03990 vs. NCBI nr
Match: gi|976903307|gb|KVH91215.1| (hypothetical protein Ccrd_006776 [Cynara cardunculus var. scolymus])

HSP 1 Score: 156.0 bits (393), Expect = 1.3e-34
Identity = 160/459 (34.86%), Postives = 211/459 (45.97%), Query Frame = 1


Query: 1   MSQCVPNWDL---------SASAAPPPFHASS---ASHDVVPTFEYEVTELTWENGQLAM 60
           MS CVP+WD          +     P   ASS   +SH   P  +Y V ELTW+NGQLAM
Sbjct: 1   MSHCVPSWDTLDDYPDRNPNPGYRKPDLRASSNSMSSHLDAPILDYAVAELTWKNGQLAM 60

Query: 61  HGLGLPRVTGKIQHGGGGGGGGGGGGGSKNTWDNKPARASGTLESLVNQGTC---HGEII 120
           HGLG PRV  K                +K TWD KP RA+ TLES+VNQ T    H   +
Sbjct: 61  HGLGPPRVVNKPH--------ATAATLTKYTWD-KP-RAAETLESIVNQATLPPNHKPQM 120

Query: 121 GFNGT-DLVPWFSDHHRQTL------QTPAAMDAMVPCEAGKAPAES--SDI---RVATR 180
              G  DLVPW       T            MDA+VP    + PA S  S +   R +TR
Sbjct: 121 HIYGAGDLVPWLDHQSSATAAGSFSASVTMTMDALVPSSNAQPPAASLRSGVGAGRCSTR 180

Query: 181 VENEKG--------RMVHGKGGRVMARMVHSGTEGSGCRNQMKVSGNAAKFGGESGKKVT 240
           V +  G        R+  G GG   A   H   E S CR+Q   +  +A FG ES +++T
Sbjct: 181 VASCSGDQSGFVDQRIRGGGGGTAAATATH---EWSSCRDQS--ASGSANFGMESSRQLT 240

Query: 241 SDTRDR-----DYSVVSGGG-----GGLTVTTATS------------QESMDNTRSGK-- 300
            +T +R      ++  S G       G   T +TS            Q +M+  + GK  
Sbjct: 241 VETCERELGVKGFTSTSMGSPENTTSGKRSTKSTSPDEQDSVCHSKPQSNMEEKKKGKGK 300

Query: 301 --ICIKTTTTAATDD----------RDSMMSRVNM-PMMVPMALHQHLPLASLMNMPMMG 360
             I  K    +  D+          +  MMSR+NM PMM+P+A+ Q   +   M  PM  
Sbjct: 301 SSISTKRNKASMLDEVIEYLKQLQAQIHMMSRMNMSPMMMPLAMQQQQQIQMAMMNPMGM 360

Query: 361 MAGMGMGLGMD---HLNMIANRPALAAGMSPLLHPTAFM--PTAAWDGGTADHIQPLPTD 381
             GMG+G+GM     LN I    +   G+ P+ HP  FM  P A+WD  T       P D
Sbjct: 361 GIGMGIGMGMPGVMDLNAIGGNRSNIPGIPPVFHPATFMQTPMASWDMHTGGDRVTNPND 420

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g03990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UNE10_ARATH	2.1e-24	30.02	Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2 SV=1	[more]

BLAST of Cp4.1LG17g03990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCL1_CUCSA	1.4e-70	58.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108570 PE=4 SV=1	[more]
A0A0B2SW75_GLYSO	5.2e-46	40.49	Transcription factor UNE10 OS=Glycine soja GN=glysoja_049467 PE=4 SV=1	[more]
A0A103XI80_CYNCS	9.2e-35	34.86	Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_006776 PE=4 ...	[more]
A0A0D2T406_GOSRA	6.2e-31	33.64	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G106900 PE=4 SV=1	[more]
A0A087GL32_ARAAL	3.4e-29	34.14	Uncharacterized protein OS=Arabis alpina GN=AALP_AA6G000800 PE=4 SV=1	[more]

BLAST of Cp4.1LG17g03990 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00050.1	1.2e-25	30.02	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of Cp4.1LG17g03990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119567\|ref\|XP_008459727.1\|	2.5e-73	60.64	PREDICTED: transcription factor UNE10 [Cucumis melo]	[more]
gi\|778712228\|ref\|XP_011656866.1\|	1.9e-70	58.87	PREDICTED: transcription factor UNE10 [Cucumis sativus]	[more]
gi\|734438381\|gb\|KHN49105.1\|	7.4e-46	40.49	Transcription factor UNE10 [Glycine soja]	[more]
gi\|698492252\|ref\|XP_009792484.1\|	1.4e-39	35.43	PREDICTED: transcription factor UNE10 isoform X4 [Nicotiana sylvestris]	[more]
gi\|976903307\|gb\|KVH91215.1\|	1.3e-34	34.86	hypothetical protein Ccrd_006776 [Cynara cardunculus var. scolymus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006007	glucose catabolic process
biological_process	GO:0009567	double fertilization forming a zygote and endosperm
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g03990.1	Cp4.1LG17g03990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 182..370 score: 1.5E-37coord: 1..155 score: 1.5
None	No IPR available	PANTHER	PTHR12565:SF173	TRANSCRIPTION FACTOR UNE10	coord: 1..155 score: 1.5E-37coord: 182..370 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG17g03990	Cucsa.120660	Cucumber (Gy14) v1	cgycpeB0295
Cp4.1LG17g03990	CmaCh17G004930	Cucurbita maxima (Rimu)	cmacpeB378
Cp4.1LG17g03990	CmaCh08G008600	Cucurbita maxima (Rimu)	cmacpeB916
Cp4.1LG17g03990	CmoCh08G008280	Cucurbita moschata (Rifu)	cmocpeB853
Cp4.1LG17g03990	CmoCh17G004640	Cucurbita moschata (Rifu)	cmocpeB341
Cp4.1LG17g03990	Cla006673	Watermelon (97103) v1	cpewmB335
Cp4.1LG17g03990	Csa6G108570	Cucumber (Chinese Long) v2	cpecuB328
Cp4.1LG17g03990	MELO3C022233	Melon (DHL92) v3.5.1	cpemeB285
Cp4.1LG17g03990	ClCG06G002970	Watermelon (Charleston Gray)	cpewcgB299
Cp4.1LG17g03990	CSPI06G08720	Wild cucumber (PI 183967)	cpecpiB329
Cp4.1LG17g03990	Lsi09G016340	Bottle gourd (USVL1VR-Ls)	cpelsiB248
Cp4.1LG17g03990	MELO3C022233.2	Melon (DHL92) v3.6.1	cpemedB333
Cp4.1LG17g03990	CsaV3_6G009090	Cucumber (Chinese Long) v3	cpecucB0410
Cp4.1LG17g03990	Bhi12G001921	Wax gourd	cpewgoB0381
Cp4.1LG17g03990	CsGy6G008820	Cucumber (Gy14) v2	cgybcpeB790
Cp4.1LG17g03990	Carg13872	Silver-seed gourd	carcpeB0851

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG17g03990	Cp4.1LG12g04210	Cucurbita pepo (Zucchini)	cpecpeB159

The following block(s) are covering this gene:

None