Cp4.1LG17g03260 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG17g03260
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGATA transcription factor, putative
LocationCp4.1LG17 : 1553511 .. 1555422 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATATTTATTTATTATTATTAGAGAGAGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTTCATCCGTTCGTTCGTTTCCCCCACTACCACCCGAAAGCCCTCACGAAGGCTGCGTGTTGACGATAAGCTCTTTCTCTCTCCACAAATAAAGGATTTTCTCTCTCTTCAAACTTCAAACGAAAACTGAAACAGAAATGGAGTCTTCTTTGGCTTTCATGGATGACCTTCTGGATTTCTCTTCGGATATCGGTGAGGAAGATGAAGAAGACGACGTCGTTCCACCCAGATCTTCCACGGCGGCCGACTCCTCGGAGTTTAACGCCGCCTCCCTCCCCGACGACACTTCTTCCGGCCGTATTTTGCTTGTAAGTTCTTTCCTTTTATTCTCTCCGGTCGGTTTCTGAAAATGGGTTGACACGGAGTGAGTTACTGTGTTGACTCGCCCGAGTTTAGTAAAGAGAAAAGTGAAGTCTTGTGAGATGAGTTGAAAAGACATTTATGTCCTTGGTAGCCACTGTATGGATTGCGAAATGTTGAGGGTATTTTCGTCATGGGATTCTAATAATAGTGGAAATATTAATATATTTAATTTCTTGATACGGCCACTCCTCTCCTCCATAATTTTAGACGAGTGTTATATTGAAATGACATTTTTGCCCCTAACTCCCGACATTTCTCCAACGAATACGACTTGGCTTTTTCGTCATTTTATTTTCGTAACCCCCCGGCTCTCAGTATTAAAATAAAACATAATAATTTAATTAAATTATTATTATTATTTATTGTTGATACTGTTATTGTAATTATTGGTGGACCAAAAAGACAGGACCGAGTCAACTCGGTTGGTTTAGGCCGAGTTTTACTGAACCGAACTCGTTTTGGTTTTGTGCTTTAGGAGGATTGTGGGGAGGAGGAACTTGAGTGGCTATCAAACGAAGATGCATTTCCGGCCGTCTCGACGTTCGTCGACATTCTCTCCGACCACCACCACCACCCGCCGCCGCCGTTGACGACGGTCTCGAAACAGAACAGTCCAGTTTCGGTTCTCGAAAGTAGTTCAGTCAGCAGCCATAGCGAAACCAACAGTACTAAGTCAAGCAGCCACGGAAGCGTTTTGATGAGTTGCTGTGTCGGCCTGAAAGTTCCGAGTAAGGCTCGGAGCAAGCGCCGTCGTGGCCGGCACATTTCCGGCCACCATCTCTGGTTCAAGCAGCAACCCAGTTCGAGGAATGTTAAACAAGTAGTACCCACCACGACGACGACGACGGCGATAGGGAGGAAATGCCTACATTGTGGAGCGGAGAAAACGCCGCAATGGCGGGCGGGGCCATTAGGGCCGAAAACGCTGTGTAATGCTTGTGGGGTTAGGTTCAAGTCAGGGCGATTGGTGCCAGAGTACCGGCCGGCTAGTAGTCCGACGTTCTCGCCGGTGCTGCACTCGAATTCTCACCGGAAAGTGATGGAAATGAGGAGGCAGAAGCAGTTAAGTACGGTGGTGAATCCAATGGATAAAGGGTAAGCTTCAATTTTGGGGATTTTGATTTTCCCCTTTCATCCGCCATTAATTTAGCTTAGATTTTTAGGCATTTGTTTGTTATTGTGGGACAGAGATTTAAAATTAGTGCAAAATTTCTCTGTTTAATGCCCAAAATTCATTAGGGAATTTTGACAAAATGTGTTTGATTGTGTTTTAGACCATTTTTTCCCCCTGTTCTTCAAGATTCTGCACATAAATAGAAAATTAGGGTTTTTTTTTATAATAATTTTCATAGATTCTAATTAGGGTTTGTGGGGTATTTTTTAATCCTTACAATACTTGTTTTTTTGTATGTAAAAATGTGAACTTTTTCTGGGTTTGATTTTCCCGAGAAAATTTCTGTAAATTAATTTTGTGTTT

mRNA sequence

AATATTTATTTATTATTATTAGAGAGAGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTTCATCCGTTCGTTCGTTTCCCCCACTACCACCCGAAAGCCCTCACGAAGGCTGCGTGTTGACGATAAGCTCTTTCTCTCTCCACAAATAAAGGATTTTCTCTCTCTTCAAACTTCAAACGAAAACTGAAACAGAAATGGAGTCTTCTTTGGCTTTCATGGATGACCTTCTGGATTTCTCTTCGGATATCGGTGAGGAAGATGAAGAAGACGACGTCGTTCCACCCAGATCTTCCACGGCGGCCGACTCCTCGGAGTTTAACGCCGCCTCCCTCCCCGACGACACTTCTTCCGGCCGTATTTTGCTTGAGGATTGTGGGGAGGAGGAACTTGAGTGGCTATCAAACGAAGATGCATTTCCGGCCGTCTCGACGTTCGTCGACATTCTCTCCGACCACCACCACCACCCGCCGCCGCCGTTGACGACGGTCTCGAAACAGAACAGTCCAGTTTCGGTTCTCGAAAGTAGTTCAGTCAGCAGCCATAGCGAAACCAACAGTACTAAGTCAAGCAGCCACGGAAGCGTTTTGATGAGTTGCTGTGTCGGCCTGAAAGTTCCGAGTAAGGCTCGGAGCAAGCGCCGTCGTGGCCGGCACATTTCCGGCCACCATCTCTGGTTCAAGCAGCAACCCAGTTCGAGGAATGTTAAACAAGTAGTACCCACCACGACGACGACGACGGCGATAGGGAGGAAATGCCTACATTGTGGAGCGGAGAAAACGCCGCAATGGCGGGCGGGGCCATTAGGGCCGAAAACGCTGTGTAATGCTTGTGGGGTTAGGTTCAAGTCAGGGCGATTGGTGCCAGAGTACCGGCCGGCTAGTAGTCCGACGTTCTCGCCGGTGCTGCACTCGAATTCTCACCGGAAAGTGATGGAAATGAGGAGGCAGAAGCAGTTAAGTACGGTGGTGAATCCAATGGATAAAGGGTAAGCTTCAATTTTGGGGATTTTGATTTTCCCCTTTCATCCGCCATTAATTTAGCTTAGATTTTTAGGCATTTGTTTGTTATTGTGGGACAGAGATTTAAAATTAGTGCAAAATTTCTCTGTTTAATGCCCAAAATTCATTAGGGAATTTTGACAAAATGTGTTTGATTGTGTTTTAGACCATTTTTTCCCCCTGTTCTTCAAGATTCTGCACATAAATAGAAAATTAGGGTTTTTTTTTATAATAATTTTCATAGATTCTAATTAGGGTTTGTGGGGTATTTTTTAATCCTTACAATACTTGTTTTTTTGTATGTAAAAATGTGAACTTTTTCTGGGTTTGATTTTCCCGAGAAAATTTCTGTAAATTAATTTTGTGTTT

Coding sequence (CDS)

ATGGAGTCTTCTTTGGCTTTCATGGATGACCTTCTGGATTTCTCTTCGGATATCGGTGAGGAAGATGAAGAAGACGACGTCGTTCCACCCAGATCTTCCACGGCGGCCGACTCCTCGGAGTTTAACGCCGCCTCCCTCCCCGACGACACTTCTTCCGGCCGTATTTTGCTTGAGGATTGTGGGGAGGAGGAACTTGAGTGGCTATCAAACGAAGATGCATTTCCGGCCGTCTCGACGTTCGTCGACATTCTCTCCGACCACCACCACCACCCGCCGCCGCCGTTGACGACGGTCTCGAAACAGAACAGTCCAGTTTCGGTTCTCGAAAGTAGTTCAGTCAGCAGCCATAGCGAAACCAACAGTACTAAGTCAAGCAGCCACGGAAGCGTTTTGATGAGTTGCTGTGTCGGCCTGAAAGTTCCGAGTAAGGCTCGGAGCAAGCGCCGTCGTGGCCGGCACATTTCCGGCCACCATCTCTGGTTCAAGCAGCAACCCAGTTCGAGGAATGTTAAACAAGTAGTACCCACCACGACGACGACGACGGCGATAGGGAGGAAATGCCTACATTGTGGAGCGGAGAAAACGCCGCAATGGCGGGCGGGGCCATTAGGGCCGAAAACGCTGTGTAATGCTTGTGGGGTTAGGTTCAAGTCAGGGCGATTGGTGCCAGAGTACCGGCCGGCTAGTAGTCCGACGTTCTCGCCGGTGCTGCACTCGAATTCTCACCGGAAAGTGATGGAAATGAGGAGGCAGAAGCAGTTAAGTACGGTGGTGAATCCAATGGATAAAGGGTAA

Protein sequence

MESSLAFMDDLLDFSSDIGEEDEEDDVVPPRSSTAADSSEFNAASLPDDTSSGRILLEDCGEEELEWLSNEDAFPAVSTFVDILSDHHHHPPPPLTTVSKQNSPVSVLESSSVSSHSETNSTKSSSHGSVLMSCCVGLKVPSKARSKRRRGRHISGHHLWFKQQPSSRNVKQVVPTTTTTTAIGRKCLHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFSPVLHSNSHRKVMEMRRQKQLSTVVNPMDKG
Homology
[Close]
BLAST of Cp4.1LG17g03260 vs. Swiss-Prot
Match: GATA1_ARATH (GATA transcription factor 1 OS=Arabidopsis thaliana GN=GATA1 PE=2 SV=2)

HSP 1 Score: 228.0 bits (580), Expect = 1.2e-58
Identity = 133/268 (49.63%), Postives = 166/268 (61.94%), Query Frame = 1 

Query: 6   AFMDDLLDFSSDIGEEDEEDDVVPPRSSTAADSSEFNAASLPDDTSSGRILLEDCG---E 65
           +FMDDLL+FS    EED+++   PPR+ T   +       L    S G    +D G   E
Sbjct: 5   SFMDDLLNFSVPEEEEDDDEHTQPPRNITRRKTG------LRPTDSFGLFNTDDLGVVEE 64

Query: 66  EELEWLSNEDAFPAVSTFVDILSDHHHHPPPPLT-------TVSKQNSPVSVLESSSVSS 125
           E+LEW+SN++AFP + TFV +L   H     P+T       T  KQ SPVSVLE+SS SS
Sbjct: 65  EDLEWISNKNAFPVIETFVGVLPSEHF----PITSLLEREATEVKQLSPVSVLETSSHSS 124

Query: 126 HSETNSTKSSSHGSV----------LMSCCVGLKVPSKARSKRRRGRHISGHHLWFKQQP 185
            + T+++   S+GS           +MSCCVG K P+KARSKRRR        LW   + 
Sbjct: 125 TTTTSNSSGGSNGSTAVATTTTTPTIMSCCVGFKAPAKARSKRRRTGRRDLRVLWTGNEQ 184

Query: 186 SSRNVKQVVPTTTTTTAIGRKCLHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEY 245
                K+ +        +GRKC HCGAEKTPQWRAGP GPKTLCNACGVR+KSGRLVPEY
Sbjct: 185 GGIQKKKTMTVAAAALIMGRKCQHCGAEKTPQWRAGPAGPKTLCNACGVRYKSGRLVPEY 244

Query: 246 RPASSPTFSPVLHSNSHRKVMEMRRQKQ 254
           RPA+SPTF+  LHSNSHRK++EMR+Q Q
Sbjct: 245 RPANSPTFTAELHSNSHRKIVEMRKQYQ 262

[Close]
BLAST of Cp4.1LG17g03260 vs. Swiss-Prot
Match: GAT12_ARATH (GATA transcription factor 12 OS=Arabidopsis thaliana GN=GATA12 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.5e-34
Identity = 114/291 (39.18%), Postives = 155/291 (53.26%), Query Frame = 1 

Query: 3   SSLAFMDDLLDFSSDIGEEDEEDDVVPPRSSTAA--DSSEFNAASLP-------DDTS-S 62
           S  A  D L+DFS+D   +DEE+DVV   ++T    DSS F+AA LP       D TS S
Sbjct: 12  SDFAVDDLLVDFSND---DDEENDVVADSTTTTTITDSSNFSAADLPSFHGDVQDGTSFS 71

Query: 63  GRILL-EDCGEEELEWLSN---EDAFPAVSTFVDILSDHHHHPPPPLTTVSKQN-SPVSV 122
           G + +  D   +ELEWLSN   E   P     ++++S     P P   T S +N +  S 
Sbjct: 72  GDLCIPSDDLADELEWLSNIVDESLSPEDVHKLELISGFKSRPDPKSDTGSPENPNSSSP 131

Query: 123 LESSSVSSHSETNSTKSSSH--------------------GSVLMSCCVGLKVPSKA--- 182
           + ++ VS  ++  S +S +                     G  ++S    L  P+     
Sbjct: 132 IFTTDVSVPAKARSKRSRAAACNWASRGLLKETFYDSPFTGETILSSQQHLSPPTSPPLL 191

Query: 183 RSKRRRGRHISGHHLWFKQQPSSRNVKQVVPTTTTTTAIGRKCLHCGAEKTPQWRAGPLG 242
            +   + + + G H            K+ V +  +  A  R+CLHC  +KTPQWR GP+G
Sbjct: 192 MAPLGKKQAVDGGH----------RRKKDVSSPESGGAEERRCLHCATDKTPQWRTGPMG 251

Query: 243 PKTLCNACGVRFKSGRLVPEYRPASSPTFSPVLHSNSHRKVMEMRRQKQLS 256
           PKTLCNACGVR+KSGRLVPEYRPA+SPTF    HSNSHRKVME+RRQK++S
Sbjct: 252 PKTLCNACGVRYKSGRLVPEYRPAASPTFVLAKHSNSHRKVMELRRQKEMS 289

[Close]
BLAST of Cp4.1LG17g03260 vs. Swiss-Prot
Match: GATA9_ARATH (GATA transcription factor 9 OS=Arabidopsis thaliana GN=GATA9 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.9e-34
Identity = 106/261 (40.61%), Postives = 145/261 (55.56%), Query Frame = 1 

Query: 8   MDDLLDFSSDIGEEDEEDDVVPPRSS----TAADSSEFNAASL-PDDTSSGRILLEDCGE 67
           +DDLLDFS+D GE D+  + +P  S+    T  DSS  N++SL  D T    + + +   
Sbjct: 20  VDDLLDFSNDDGEVDDGLNTLPDSSTLSTGTLTDSS--NSSSLFTDGTGFSDLYIPNDDI 79

Query: 68  EELEWLSN--EDAFPAVSTFVDILSDHHHHPPPPLTTVSKQNSPVSVLE-------SSSV 127
            ELEWLSN  E++F         L     +P    +T++    P   L+        S+V
Sbjct: 80  AELEWLSNFVEESFAGEDQDKLHLFSGLKNPQTTGSTLTHLIKPEPELDHQFIDIDESNV 139

Query: 128 SSHSETNSTKSSSHGSVLMSCCVGLKVPSKARSKRRRGRHISGHHLWFKQQPSSRNVKQV 187
           +  ++  S +S S  S   S  + L    +   K+++ R         K+Q  + ++   
Sbjct: 140 AVPAKARSKRSRSAASTWASRLLSLADSDETNPKKKQRR--------VKEQDFAGDMD-- 199

Query: 188 VPTTTTTTAIGRKCLHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTF 247
                  +  GR+CLHC  EKTPQWR GP+GPKTLCNACGVR+KSGRLVPEYRPASSPTF
Sbjct: 200 --VDCGESGGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTF 259

Query: 248 SPVLHSNSHRKVMEMRRQKQL 255
               HSNSHRKVME+RRQK++
Sbjct: 260 VMARHSNSHRKVMELRRQKEM 266

[Close]
BLAST of Cp4.1LG17g03260 vs. Swiss-Prot
Match: GATA4_ARATH (GATA transcription factor 4 OS=Arabidopsis thaliana GN=GATA4 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 8.9e-30
Identity = 68/118 (57.63%), Postives = 76/118 (64.41%), Query Frame = 1 

Query: 143 KARSKRRRGRHISGHHLWFKQQPSSR-------NVKQVVPTTTTTTAIGRKCLHCGAEKT 202
           K RS+R R    S    W     S           K+V    + T    R+C HC +EKT
Sbjct: 109 KPRSRRSRAPAPSVAGTWAPMSESELCHSVAKPKPKKVYNAESVTADGARRCTHCASEKT 168

Query: 203 PQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFSPVLHSNSHRKVMEMRRQKQ 254
           PQWR GPLGPKTLCNACGVR+KSGRLVPEYRPASSPTF    HSNSHRKVME+RRQK+
Sbjct: 169 PQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFVLTQHSNSHRKVMELRRQKE 226

[Close]
BLAST of Cp4.1LG17g03260 vs. Swiss-Prot
Match: GATA6_ARATH (GATA transcription factor 6 OS=Arabidopsis thaliana GN=GATA6 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.6e-29
Identity = 108/279 (38.71%), Postives = 138/279 (49.46%), Query Frame = 1 

Query: 8   MDDLLDFSSDIGEEDEEDDVVPPRSS--------------TAADSSEFNAASLPDDTSSG 67
           +DDLLDFS    +E+E+DDV+    +              T   S++F+ A     TS  
Sbjct: 30  VDDLLDFS----KEEEDDDVLVEDEAELKVQRKRGVSDENTLHRSNDFSTADF--HTSGL 89

Query: 68  RILLEDCGEEELEWLSNEDAFPAVSTFVDILSDHHHHPP---PPLTTVSKQNSPVSVLES 127
            + ++D  E  LEWLSN         FVD  S   +  P   P   T ++++    V E 
Sbjct: 90  SVPMDDIAE--LEWLSN---------FVDDSSFTPYSAPTNKPVWLTGNRRHLVQPVKEE 149

Query: 128 SSVSSHSETNSTKSS---------SHGSVLMSCCVGLKVPSKARSKRRRGRH--ISGHHL 187
           +   S      T+           SHGS  ++        S + S R        SG  L
Sbjct: 150 TCFKSQHPAVKTRPKRARTGVRVWSHGSQSLTDSSSSSTTSSSSSPRPSSPLWLASGQFL 209

Query: 188 ---WFKQQPSSRNVKQVVPTTTTTTAIGRKCLHCGAEKTPQWRAGPLGPKTLCNACGVRF 247
                K Q   +  K    T T T    R+C HCG +KTPQWRAGPLG KTLCNACGVR+
Sbjct: 210 DEPMTKTQKKKKVWKNAGQTQTQTQTQTRQCGHCGVQKTPQWRAGPLGAKTLCNACGVRY 269

Query: 248 KSGRLVPEYRPASSPTFSPVLHSNSHRKVMEMRRQKQLS 256
           KSGRL+PEYRPA SPTFS  LHSN H KV+EMRR+K+ S
Sbjct: 270 KSGRLLPEYRPACSPTFSSELHSNHHSKVIEMRRKKETS 291

[Close]
BLAST of Cp4.1LG17g03260 vs. TrEMBL
Match: A0A0A0LKH9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G162660 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 6.4e-112
Identity = 222/287 (77.35%), Postives = 237/287 (82.58%), Query Frame = 1 

Query: 1   MESSLAFMDDLLDFSSDIGEEDEEDDVVPP-------RSSTAADSSEFNAASL-PDDTSS 60
           MESSLAFMDDLLDFSSDIGEEDEEDD VPP        S+TA DSS+ NAA++ PDD+SS
Sbjct: 1   MESSLAFMDDLLDFSSDIGEEDEEDDAVPPFSVKPKSSSTTAPDSSDLNAAAMHPDDSSS 60

Query: 61  GRILLEDCGEEELEWLSNEDAFPAVSTFVDILSDHHHH---PPPPLTTVSKQNSPVSVLE 120
            R+L E+  EEELEWLSNEDAFPAV TFVDILSDHHHH    PPPL +VSKQNSPVSVLE
Sbjct: 61  CRVLPEEYAEEELEWLSNEDAFPAVETFVDILSDHHHHHAPQPPPLPSVSKQNSPVSVLE 120

Query: 121 SSSVSSHSETNS--TKSSSHGS-VLMSCCVGLKVPSKARSKRRRGRHISGHHLWFKQQPS 180
           S+S+SSH ET +   K+S H S +LMSCC  LKVPSKARSKRRRGRHISGHHL FKQQPS
Sbjct: 121 STSISSHGETTNGGNKTSVHSSSILMSCCGSLKVPSKARSKRRRGRHISGHHLLFKQQPS 180

Query: 181 SRNVKQVVPTTTT---------TTAIGRKCLHCGAEKTPQWRAGPLGPKTLCNACGVRFK 240
           S+N+KQVVPTT T         T  IGRKCLHCGAEKTPQWRAGP GPKTLCNACGVRFK
Sbjct: 181 SKNLKQVVPTTATAAVVAATTGTAGIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRFK 240

Query: 241 SGRLVPEYRPASSPTFSPVLHSNSHRKVMEMRRQKQLSTVVNPMDKG 265
           SGRLVPEYRPASSPTFS  LHSNSHRKVMEMRRQKQL  VVNPMDKG
Sbjct: 241 SGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQLGMVVNPMDKG 287

[Close]
BLAST of Cp4.1LG17g03260 vs. TrEMBL
Match: A0A067JC77_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06429 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 9.8e-68
Identity = 153/274 (55.84%), Postives = 194/274 (70.80%), Query Frame = 1 

Query: 1   MESSLAFMDDLLDFSSDIGEEDEEDDVVPPRSS------TAADSSEFNAASLPDDTSSGR 60
           ++ +  FMDDLLDF+SDIGEED++++   PR +           + F+    PDD++   
Sbjct: 4   LDPAACFMDDLLDFASDIGEEDDDEEHNKPRKALPTLNPNGLHPAPFDVLDHPDDSTHP- 63

Query: 61  ILLEDCGEEELEWLSNEDAFPAVSTFVDILSDHHHHPPPPLTTVSKQNSPVSVLESSSVS 120
             L +  EEELEWLSN+DAFPAV TFVDI+S++    P       KQ SPVSVLE+S+ S
Sbjct: 64  --LPEFAEEELEWLSNKDAFPAVETFVDIISENPGSLP-------KQRSPVSVLENSTTS 123

Query: 121 SHSETNSTKSSSHGSVLMSCCVGLKVPSKARSK--RRRGRHISGHHLWFKQQPSSRNVKQ 180
           S S + +  SS++GSV+M+ C  L+VP KARSK  RRR R +  H  W+ Q+    N+K+
Sbjct: 124 STSISGN--SSTNGSVIMNYCRSLQVPVKARSKHHRRRRRDLQAHQCWWNQE----NLKK 183

Query: 181 VVPTTTTTTAIGRKCLHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPT 240
           V P  T++T +GRKC HCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSP+
Sbjct: 184 VRPPVTSST-MGRKCQHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPS 243

Query: 241 FSPVLHSNSHRKVMEMRRQKQLS--TVVNPMDKG 265
           F   +HSNSHRKV+EMR+QKQ+    VV PM+KG
Sbjct: 244 FCSKMHSNSHRKVLEMRKQKQMMGLVVVKPMEKG 260

[Close]
BLAST of Cp4.1LG17g03260 vs. TrEMBL
Match: B9RWP4_RICCO (GATA transcription factor, putative OS=Ricinus communis GN=RCOM_1023150 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.7e-59
Identity = 130/207 (62.80%), Postives = 156/207 (75.36%), Query Frame = 1 

Query: 62  EEELEWLSNEDAFPAVSTFVDILSDHHHHPPPPLTTVSKQNSPVSVLESSSVSSHSETNS 121
           EEELEWLSN+DAFP+V TFVDIL+++         ++ K  SPVSVLE+S+ SS S  NS
Sbjct: 12  EEELEWLSNKDAFPSVETFVDILTENPG-------SLQKHRSPVSVLENSTTSSTS--NS 71

Query: 122 TKSSSHGSVLMSCCVGLKVPSKARSK--RRRGRHISGHHLWFKQQPSSRNVKQVVPTTTT 181
             S ++ SV+M+ C  L VP KARSK  RRR R + G   W+ Q+    N+K+V    ++
Sbjct: 72  GHSGTNDSVIMNYCRSLHVPVKARSKPHRRRRRDLGGQQCWWSQE----NLKKVKVVKSS 131

Query: 182 TTAIGRKCLHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFSPVLHS 241
           ++ IGRKC HCGAEKTPQWRAGPLGPKTLCNACGVR+KSGRLVPEYRPASSPTFS VLHS
Sbjct: 132 SSTIGRKCQHCGAEKTPQWRAGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFSSVLHS 191

Query: 242 NSHRKVMEMRRQKQLS--TVVNPMDKG 265
           NSHRKV+EMRRQKQ+    VV PM+KG
Sbjct: 192 NSHRKVLEMRRQKQMMGIMVVKPMEKG 205

[Close]
BLAST of Cp4.1LG17g03260 vs. TrEMBL
Match: F6HS48_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0051g00450 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.7e-59
Identity = 142/269 (52.79%), Postives = 173/269 (64.31%), Query Frame = 1 

Query: 1   MESSLAFMDDLLDFSSDIGEEDEEDDVVPPRSSTAADSSEFNAASLPDDTSSGRILLEDC 60
           ++ +  F+DDLLDFSSDIGE+D++D     RSS++      ++ SLPD            
Sbjct: 4   LDPAACFVDDLLDFSSDIGEDDDDDHKRRTRSSSSLLVGG-HSRSLPDPPV--------- 63

Query: 61  GEEELEWLSNEDAFPAVSTFVDILSDHHHHPPPPLTTVSKQNSPVSVLESSSVSSHSETN 120
            EEELEWL N+D FP V TF+D L       P  +  + KQ SP+SVLE+SS SS    +
Sbjct: 64  -EEELEWL-NKDVFPGVETFLDYL-------PTSVENIPKQQSPISVLENSSHSS----S 123

Query: 121 STKSSSHGSVLMSCCVGLKVPSKARSKRRRGRH-----ISGHHLWFKQQPSSRNVKQVVP 180
           S  S+S  + +MSCC   +VPS+ARSKRRR RH     I G   W+     + N     P
Sbjct: 124 SNNSNSSTTTIMSCCENFRVPSRARSKRRRRRHKDFSDIPGQPWWWWSSQGNTNANHSSP 183

Query: 181 T----TTTTTAIGRKCLHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSP 240
           T    T T++ IGRKC HC AEKTPQWRAGPLGPKTLCNACGVR+KSGRLV EYRPASSP
Sbjct: 184 TNSKQTITSSTIGRKCQHCQAEKTPQWRAGPLGPKTLCNACGVRYKSGRLVAEYRPASSP 243

Query: 241 TFSPVLHSNSHRKVMEMRRQKQLSTVVNP 261
           TFS  +HSNSHRK+MEMR+ KQ   VV P
Sbjct: 244 TFSSKVHSNSHRKIMEMRKLKQRDVVVRP 249

[Close]
BLAST of Cp4.1LG17g03260 vs. TrEMBL
Match: A0A061ESZ5_THECC (GATA transcription factor 1, putative OS=Theobroma cacao GN=TCM_020437 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.2e-59
Identity = 143/266 (53.76%), Postives = 179/266 (67.29%), Query Frame = 1 

Query: 2   ESSLAFMDDLLDFSSDIGEEDEEDDVVPPRSSTAADSSEFNA-ASLPDDTSSGRILLEDC 61
           + + +F ++LLDF SD+GEEDE+++    +SS    SS  NA  S P+            
Sbjct: 5   DMAASFDENLLDFGSDVGEEDEDEE--NNKSSKLNTSSSLNANRSFPE-----------F 64

Query: 62  GEEELEWLSNEDAFPAVSTFVDILSDHHHHPPPPLTTVSKQNSPVSVLESSSVSSHSETN 121
            EEELEW+SN+DAFP+V TFVDIL            T +K  SPVSVL++S+ SS+S  +
Sbjct: 65  AEEELEWISNKDAFPSVETFVDILG-----------TAAKHQSPVSVLDNSNSSSNSSGS 124

Query: 122 STKSSSHGSVLMSCCVGLKVPSKARSKR-RRGRHISGHHLWFKQQPSSRNVKQVVPTTTT 181
           ST ++  G+++M CC  LKVP KARSKR R+ R +      +  Q + +N    V    +
Sbjct: 125 STLTN--GNIVMYCCGNLKVPVKARSKRLRKCRDLRNQENSWWVQENVKNASAHVKGAGS 184

Query: 182 TTAIGRKCLHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFSPVLHS 241
            T IGRKC HCGAEKTPQWRAGPLGPKTLCNACGVR+KSGRLVPEYRPASSPTFS  LHS
Sbjct: 185 RT-IGRKCQHCGAEKTPQWRAGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFSIELHS 243

Query: 242 NSHRKVMEMRRQKQLS-TVVNPMDKG 265
           NSHRK++EMRRQKQ   + + PMDKG
Sbjct: 245 NSHRKILEMRRQKQFGFSAMKPMDKG 243

[Close]
BLAST of Cp4.1LG17g03260 vs. TAIR10
Match: AT3G24050.1 (AT3G24050.1 GATA transcription factor 1)

HSP 1 Score: 228.0 bits (580), Expect = 6.7e-60
Identity = 133/268 (49.63%), Postives = 166/268 (61.94%), Query Frame = 1 

Query: 6   AFMDDLLDFSSDIGEEDEEDDVVPPRSSTAADSSEFNAASLPDDTSSGRILLEDCG---E 65
           +FMDDLL+FS    EED+++   PPR+ T   +       L    S G    +D G   E
Sbjct: 5   SFMDDLLNFSVPEEEEDDDEHTQPPRNITRRKTG------LRPTDSFGLFNTDDLGVVEE 64

Query: 66  EELEWLSNEDAFPAVSTFVDILSDHHHHPPPPLT-------TVSKQNSPVSVLESSSVSS 125
           E+LEW+SN++AFP + TFV +L   H     P+T       T  KQ SPVSVLE+SS SS
Sbjct: 65  EDLEWISNKNAFPVIETFVGVLPSEHF----PITSLLEREATEVKQLSPVSVLETSSHSS 124

Query: 126 HSETNSTKSSSHGSV----------LMSCCVGLKVPSKARSKRRRGRHISGHHLWFKQQP 185
            + T+++   S+GS           +MSCCVG K P+KARSKRRR        LW   + 
Sbjct: 125 TTTTSNSSGGSNGSTAVATTTTTPTIMSCCVGFKAPAKARSKRRRTGRRDLRVLWTGNEQ 184

Query: 186 SSRNVKQVVPTTTTTTAIGRKCLHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEY 245
                K+ +        +GRKC HCGAEKTPQWRAGP GPKTLCNACGVR+KSGRLVPEY
Sbjct: 185 GGIQKKKTMTVAAAALIMGRKCQHCGAEKTPQWRAGPAGPKTLCNACGVRYKSGRLVPEY 244

Query: 246 RPASSPTFSPVLHSNSHRKVMEMRRQKQ 254
           RPA+SPTF+  LHSNSHRK++EMR+Q Q
Sbjct: 245 RPANSPTFTAELHSNSHRKIVEMRKQYQ 262

[Close]
BLAST of Cp4.1LG17g03260 vs. TAIR10
Match: AT5G25830.1 (AT5G25830.1 GATA transcription factor 12)

HSP 1 Score: 146.7 bits (369), Expect = 2.0e-35
Identity = 114/291 (39.18%), Postives = 155/291 (53.26%), Query Frame = 1 

Query: 3   SSLAFMDDLLDFSSDIGEEDEEDDVVPPRSSTAA--DSSEFNAASLP-------DDTS-S 62
           S  A  D L+DFS+D   +DEE+DVV   ++T    DSS F+AA LP       D TS S
Sbjct: 12  SDFAVDDLLVDFSND---DDEENDVVADSTTTTTITDSSNFSAADLPSFHGDVQDGTSFS 71

Query: 63  GRILL-EDCGEEELEWLSN---EDAFPAVSTFVDILSDHHHHPPPPLTTVSKQN-SPVSV 122
           G + +  D   +ELEWLSN   E   P     ++++S     P P   T S +N +  S 
Sbjct: 72  GDLCIPSDDLADELEWLSNIVDESLSPEDVHKLELISGFKSRPDPKSDTGSPENPNSSSP 131

Query: 123 LESSSVSSHSETNSTKSSSH--------------------GSVLMSCCVGLKVPSKA--- 182
           + ++ VS  ++  S +S +                     G  ++S    L  P+     
Sbjct: 132 IFTTDVSVPAKARSKRSRAAACNWASRGLLKETFYDSPFTGETILSSQQHLSPPTSPPLL 191

Query: 183 RSKRRRGRHISGHHLWFKQQPSSRNVKQVVPTTTTTTAIGRKCLHCGAEKTPQWRAGPLG 242
            +   + + + G H            K+ V +  +  A  R+CLHC  +KTPQWR GP+G
Sbjct: 192 MAPLGKKQAVDGGH----------RRKKDVSSPESGGAEERRCLHCATDKTPQWRTGPMG 251

Query: 243 PKTLCNACGVRFKSGRLVPEYRPASSPTFSPVLHSNSHRKVMEMRRQKQLS 256
           PKTLCNACGVR+KSGRLVPEYRPA+SPTF    HSNSHRKVME+RRQK++S
Sbjct: 252 PKTLCNACGVRYKSGRLVPEYRPAASPTFVLAKHSNSHRKVMELRRQKEMS 289

[Close]
BLAST of Cp4.1LG17g03260 vs. TAIR10
Match: AT4G32890.1 (AT4G32890.1 GATA transcription factor 9)

HSP 1 Score: 146.0 bits (367), Expect = 3.3e-35
Identity = 106/261 (40.61%), Postives = 145/261 (55.56%), Query Frame = 1 

Query: 8   MDDLLDFSSDIGEEDEEDDVVPPRSS----TAADSSEFNAASL-PDDTSSGRILLEDCGE 67
           +DDLLDFS+D GE D+  + +P  S+    T  DSS  N++SL  D T    + + +   
Sbjct: 20  VDDLLDFSNDDGEVDDGLNTLPDSSTLSTGTLTDSS--NSSSLFTDGTGFSDLYIPNDDI 79

Query: 68  EELEWLSN--EDAFPAVSTFVDILSDHHHHPPPPLTTVSKQNSPVSVLE-------SSSV 127
            ELEWLSN  E++F         L     +P    +T++    P   L+        S+V
Sbjct: 80  AELEWLSNFVEESFAGEDQDKLHLFSGLKNPQTTGSTLTHLIKPEPELDHQFIDIDESNV 139

Query: 128 SSHSETNSTKSSSHGSVLMSCCVGLKVPSKARSKRRRGRHISGHHLWFKQQPSSRNVKQV 187
           +  ++  S +S S  S   S  + L    +   K+++ R         K+Q  + ++   
Sbjct: 140 AVPAKARSKRSRSAASTWASRLLSLADSDETNPKKKQRR--------VKEQDFAGDMD-- 199

Query: 188 VPTTTTTTAIGRKCLHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTF 247
                  +  GR+CLHC  EKTPQWR GP+GPKTLCNACGVR+KSGRLVPEYRPASSPTF
Sbjct: 200 --VDCGESGGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTF 259

Query: 248 SPVLHSNSHRKVMEMRRQKQL 255
               HSNSHRKVME+RRQK++
Sbjct: 260 VMARHSNSHRKVMELRRQKEM 266

[Close]
BLAST of Cp4.1LG17g03260 vs. TAIR10
Match: AT3G60530.1 (AT3G60530.1 GATA transcription factor 4)

HSP 1 Score: 132.1 bits (331), Expect = 5.0e-31
Identity = 68/118 (57.63%), Postives = 76/118 (64.41%), Query Frame = 1 

Query: 143 KARSKRRRGRHISGHHLWFKQQPSSR-------NVKQVVPTTTTTTAIGRKCLHCGAEKT 202
           K RS+R R    S    W     S           K+V    + T    R+C HC +EKT
Sbjct: 109 KPRSRRSRAPAPSVAGTWAPMSESELCHSVAKPKPKKVYNAESVTADGARRCTHCASEKT 168

Query: 203 PQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFSPVLHSNSHRKVMEMRRQKQ 254
           PQWR GPLGPKTLCNACGVR+KSGRLVPEYRPASSPTF    HSNSHRKVME+RRQK+
Sbjct: 169 PQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFVLTQHSNSHRKVMELRRQKE 226

[Close]
BLAST of Cp4.1LG17g03260 vs. TAIR10
Match: AT3G51080.1 (AT3G51080.1 GATA transcription factor 6)

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-30
Identity = 108/279 (38.71%), Postives = 138/279 (49.46%), Query Frame = 1 

Query: 8   MDDLLDFSSDIGEEDEEDDVVPPRSS--------------TAADSSEFNAASLPDDTSSG 67
           +DDLLDFS    +E+E+DDV+    +              T   S++F+ A     TS  
Sbjct: 30  VDDLLDFS----KEEEDDDVLVEDEAELKVQRKRGVSDENTLHRSNDFSTADF--HTSGL 89

Query: 68  RILLEDCGEEELEWLSNEDAFPAVSTFVDILSDHHHHPP---PPLTTVSKQNSPVSVLES 127
            + ++D  E  LEWLSN         FVD  S   +  P   P   T ++++    V E 
Sbjct: 90  SVPMDDIAE--LEWLSN---------FVDDSSFTPYSAPTNKPVWLTGNRRHLVQPVKEE 149

Query: 128 SSVSSHSETNSTKSS---------SHGSVLMSCCVGLKVPSKARSKRRRGRH--ISGHHL 187
           +   S      T+           SHGS  ++        S + S R        SG  L
Sbjct: 150 TCFKSQHPAVKTRPKRARTGVRVWSHGSQSLTDSSSSSTTSSSSSPRPSSPLWLASGQFL 209

Query: 188 ---WFKQQPSSRNVKQVVPTTTTTTAIGRKCLHCGAEKTPQWRAGPLGPKTLCNACGVRF 247
                K Q   +  K    T T T    R+C HCG +KTPQWRAGPLG KTLCNACGVR+
Sbjct: 210 DEPMTKTQKKKKVWKNAGQTQTQTQTQTRQCGHCGVQKTPQWRAGPLGAKTLCNACGVRY 269

Query: 248 KSGRLVPEYRPASSPTFSPVLHSNSHRKVMEMRRQKQLS 256
           KSGRL+PEYRPA SPTFS  LHSN H KV+EMRR+K+ S
Sbjct: 270 KSGRLLPEYRPACSPTFSSELHSNHHSKVIEMRRKKETS 291

[Close]
BLAST of Cp4.1LG17g03260 vs. NCBI nr
Match: gi|659121561|ref|XP_008460722.1| (PREDICTED: GATA transcription factor 1 isoform X2 [Cucumis melo])

HSP 1 Score: 422.2 bits (1084), Expect = 6.8e-115
Identity = 226/287 (78.75%), Postives = 239/287 (83.28%), Query Frame = 1 

Query: 1   MESSLAFMDDLLDFSSDIGEEDEEDDVVPP-------RSSTAADSSEFNAASL-PDDTSS 60
           MESSLAFMDDLLDFSSDIGEEDEEDD VPP        S+TA DSS+ NAA++ PDD+SS
Sbjct: 1   MESSLAFMDDLLDFSSDIGEEDEEDDAVPPFSVKSKSSSTTAPDSSDLNAAAMHPDDSSS 60

Query: 61  GRILLEDCGEEELEWLSNEDAFPAVSTFVDILSDHHHH---PPPPLTTVSKQNSPVSVLE 120
            R+L ED  EEELEWLSNEDAFPAV TFVDILSDHHHH    PPPLT+VSKQNSPVSVLE
Sbjct: 61  CRVLPEDYAEEELEWLSNEDAFPAVETFVDILSDHHHHHAPQPPPLTSVSKQNSPVSVLE 120

Query: 121 SSSVSSHSET--NSTKSSSHGS-VLMSCCVGLKVPSKARSKRRRGRHISGHHLWFKQQPS 180
           S+S+SSH ET     K+S HGS +LMSCC GLKVP KARSKRRRGRHISGHHLWFKQQPS
Sbjct: 121 STSISSHGETINGGNKTSVHGSSILMSCCGGLKVPGKARSKRRRGRHISGHHLWFKQQPS 180

Query: 181 SRNVKQVVPTTTTTTA---------IGRKCLHCGAEKTPQWRAGPLGPKTLCNACGVRFK 240
           S+N+KQVVPTT T  A         IGRKCLHCGAEKTPQWRAGP GPKTLCNACGVRFK
Sbjct: 181 SKNLKQVVPTTETAAAVAATTGAAGIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRFK 240

Query: 241 SGRLVPEYRPASSPTFSPVLHSNSHRKVMEMRRQKQLSTVVNPMDKG 265
           SGRLVPEYRPASSPTFS  LHSNSHRKVMEMRRQKQL  VVNPMDKG
Sbjct: 241 SGRLVPEYRPASSPTFSADLHSNSHRKVMEMRRQKQLGMVVNPMDKG 287

[Close]
BLAST of Cp4.1LG17g03260 vs. NCBI nr
Match: gi|659121559|ref|XP_008460721.1| (PREDICTED: GATA transcription factor 1 isoform X1 [Cucumis melo])

HSP 1 Score: 417.5 bits (1072), Expect = 1.7e-113
Identity = 226/288 (78.47%), Postives = 239/288 (82.99%), Query Frame = 1 

Query: 1   MESSLAFMDDLLDFSSDIGEEDEEDDVVPP-------RSSTAADSSEFNAASL-PDDTSS 60
           MESSLAFMDDLLDFSSDIGEEDEEDD VPP        S+TA DSS+ NAA++ PDD+SS
Sbjct: 1   MESSLAFMDDLLDFSSDIGEEDEEDDAVPPFSVKSKSSSTTAPDSSDLNAAAMHPDDSSS 60

Query: 61  GRILLE-DCGEEELEWLSNEDAFPAVSTFVDILSDHHHH---PPPPLTTVSKQNSPVSVL 120
            R+L E D  EEELEWLSNEDAFPAV TFVDILSDHHHH    PPPLT+VSKQNSPVSVL
Sbjct: 61  CRVLPEEDYAEEELEWLSNEDAFPAVETFVDILSDHHHHHAPQPPPLTSVSKQNSPVSVL 120

Query: 121 ESSSVSSHSET--NSTKSSSHGS-VLMSCCVGLKVPSKARSKRRRGRHISGHHLWFKQQP 180
           ES+S+SSH ET     K+S HGS +LMSCC GLKVP KARSKRRRGRHISGHHLWFKQQP
Sbjct: 121 ESTSISSHGETINGGNKTSVHGSSILMSCCGGLKVPGKARSKRRRGRHISGHHLWFKQQP 180

Query: 181 SSRNVKQVVPTTTTTTA---------IGRKCLHCGAEKTPQWRAGPLGPKTLCNACGVRF 240
           SS+N+KQVVPTT T  A         IGRKCLHCGAEKTPQWRAGP GPKTLCNACGVRF
Sbjct: 181 SSKNLKQVVPTTETAAAVAATTGAAGIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRF 240

Query: 241 KSGRLVPEYRPASSPTFSPVLHSNSHRKVMEMRRQKQLSTVVNPMDKG 265
           KSGRLVPEYRPASSPTFS  LHSNSHRKVMEMRRQKQL  VVNPMDKG
Sbjct: 241 KSGRLVPEYRPASSPTFSADLHSNSHRKVMEMRRQKQLGMVVNPMDKG 288

[Close]
BLAST of Cp4.1LG17g03260 vs. NCBI nr
Match: gi|449465254|ref|XP_004150343.1| (PREDICTED: GATA transcription factor 1 [Cucumis sativus])

HSP 1 Score: 411.8 bits (1057), Expect = 9.3e-112
Identity = 222/287 (77.35%), Postives = 237/287 (82.58%), Query Frame = 1 

Query: 1   MESSLAFMDDLLDFSSDIGEEDEEDDVVPP-------RSSTAADSSEFNAASL-PDDTSS 60
           MESSLAFMDDLLDFSSDIGEEDEEDD VPP        S+TA DSS+ NAA++ PDD+SS
Sbjct: 1   MESSLAFMDDLLDFSSDIGEEDEEDDAVPPFSVKPKSSSTTAPDSSDLNAAAMHPDDSSS 60

Query: 61  GRILLEDCGEEELEWLSNEDAFPAVSTFVDILSDHHHH---PPPPLTTVSKQNSPVSVLE 120
            R+L E+  EEELEWLSNEDAFPAV TFVDILSDHHHH    PPPL +VSKQNSPVSVLE
Sbjct: 61  CRVLPEEYAEEELEWLSNEDAFPAVETFVDILSDHHHHHAPQPPPLPSVSKQNSPVSVLE 120

Query: 121 SSSVSSHSETNS--TKSSSHGS-VLMSCCVGLKVPSKARSKRRRGRHISGHHLWFKQQPS 180
           S+S+SSH ET +   K+S H S +LMSCC  LKVPSKARSKRRRGRHISGHHL FKQQPS
Sbjct: 121 STSISSHGETTNGGNKTSVHSSSILMSCCGSLKVPSKARSKRRRGRHISGHHLLFKQQPS 180

Query: 181 SRNVKQVVPTTTT---------TTAIGRKCLHCGAEKTPQWRAGPLGPKTLCNACGVRFK 240
           S+N+KQVVPTT T         T  IGRKCLHCGAEKTPQWRAGP GPKTLCNACGVRFK
Sbjct: 181 SKNLKQVVPTTATAAVVAATTGTAGIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRFK 240

Query: 241 SGRLVPEYRPASSPTFSPVLHSNSHRKVMEMRRQKQLSTVVNPMDKG 265
           SGRLVPEYRPASSPTFS  LHSNSHRKVMEMRRQKQL  VVNPMDKG
Sbjct: 241 SGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQLGMVVNPMDKG 287

[Close]
BLAST of Cp4.1LG17g03260 vs. NCBI nr
Match: gi|802796066|ref|XP_012092669.1| (PREDICTED: GATA transcription factor 1 [Jatropha curcas])

HSP 1 Score: 265.0 bits (676), Expect = 1.4e-67
Identity = 153/274 (55.84%), Postives = 194/274 (70.80%), Query Frame = 1 

Query: 1   MESSLAFMDDLLDFSSDIGEEDEEDDVVPPRSS------TAADSSEFNAASLPDDTSSGR 60
           ++ +  FMDDLLDF+SDIGEED++++   PR +           + F+    PDD++   
Sbjct: 4   LDPAACFMDDLLDFASDIGEEDDDEEHNKPRKALPTLNPNGLHPAPFDVLDHPDDSTHP- 63

Query: 61  ILLEDCGEEELEWLSNEDAFPAVSTFVDILSDHHHHPPPPLTTVSKQNSPVSVLESSSVS 120
             L +  EEELEWLSN+DAFPAV TFVDI+S++    P       KQ SPVSVLE+S+ S
Sbjct: 64  --LPEFAEEELEWLSNKDAFPAVETFVDIISENPGSLP-------KQRSPVSVLENSTTS 123

Query: 121 SHSETNSTKSSSHGSVLMSCCVGLKVPSKARSK--RRRGRHISGHHLWFKQQPSSRNVKQ 180
           S S + +  SS++GSV+M+ C  L+VP KARSK  RRR R +  H  W+ Q+    N+K+
Sbjct: 124 STSISGN--SSTNGSVIMNYCRSLQVPVKARSKHHRRRRRDLQAHQCWWNQE----NLKK 183

Query: 181 VVPTTTTTTAIGRKCLHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPT 240
           V P  T++T +GRKC HCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSP+
Sbjct: 184 VRPPVTSST-MGRKCQHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPS 243

Query: 241 FSPVLHSNSHRKVMEMRRQKQLS--TVVNPMDKG 265
           F   +HSNSHRKV+EMR+QKQ+    VV PM+KG
Sbjct: 244 FCSKMHSNSHRKVLEMRKQKQMMGLVVVKPMEKG 260

[Close]
BLAST of Cp4.1LG17g03260 vs. NCBI nr
Match: gi|720025636|ref|XP_010264014.1| (PREDICTED: GATA transcription factor 1 [Nelumbo nucifera])

HSP 1 Score: 241.5 bits (615), Expect = 1.7e-60
Identity = 149/291 (51.20%), Postives = 182/291 (62.54%), Query Frame = 1 

Query: 1   MESSLAFMDDLLDFSSDIGEEDEEDD------VVP---PRSSTAADSSEFNAASL--PDD 60
           +ES+  F+DDLLDFSSDIGE+DEEDD       +P   P      DS   N ++      
Sbjct: 4   LESAACFVDDLLDFSSDIGEDDEEDDHKNSNKALPSSLPLPLPTLDSKPSNNSNTHHQQQ 63

Query: 61  TSSGRILLE---------DCGEEELEWLSNEDAFPAVSTFVDILSDHHHHPPPPLTTVSK 120
             +G  +++         +  EE+LEWLSNEDAFPAV  F D L       P       K
Sbjct: 64  EPTGLTIIDPDEHHHSFPELLEEDLEWLSNEDAFPAVEAFDDFLLGKLSKGP-------K 123

Query: 121 QNSPVSVLESSSVSSHSETNSTKSSSHGSVLMSCCVGLKVPSKARSKRRRGRH-----IS 180
           Q SPVSVLE+SS   +S  NS+ S      +MSCC  L+VP +ARSKRRR R      IS
Sbjct: 124 QQSPVSVLENSS---NSAINSSSS------IMSCCGNLQVPVRARSKRRRRRRSGFSDIS 183

Query: 181 GHHLWFKQQPSSRNVKQ--VVPTTTTTTAIGRKCLHCGAEKTPQWRAGPLGPKTLCNACG 240
           G   W+  +P ++++        T TT ++GR+CLHC AEKTPQWRAGPLGPKTLCNACG
Sbjct: 184 GQQWWWWWEPKNKSIGGGGAAKVTKTTASMGRRCLHCLAEKTPQWRAGPLGPKTLCNACG 243

Query: 241 VRFKSGRLVPEYRPASSPTFSPVLHSNSHRKVMEMRRQKQLSTVVNPMDKG 265
           VR+KSGRLVPEYRPA SPTFS  LHSNSHRK++EMRRQKQ   ++  MDKG
Sbjct: 244 VRYKSGRLVPEYRPACSPTFSSELHSNSHRKILEMRRQKQKELLLKSMDKG 278

The following BLAST results are available for this feature:
BLAST of Cp4.1LG17g03260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GATA1_ARATH1.2e-5849.63GATA transcription factor 1 OS=Arabidopsis thaliana GN=GATA1 PE=2 SV=2[more]
GAT12_ARATH3.5e-3439.18GATA transcription factor 12 OS=Arabidopsis thaliana GN=GATA12 PE=2 SV=1[more]
GATA9_ARATH5.9e-3440.61GATA transcription factor 9 OS=Arabidopsis thaliana GN=GATA9 PE=2 SV=1[more]
GATA4_ARATH8.9e-3057.63GATA transcription factor 4 OS=Arabidopsis thaliana GN=GATA4 PE=2 SV=1[more]
GATA6_ARATH2.6e-2938.71GATA transcription factor 6 OS=Arabidopsis thaliana GN=GATA6 PE=2 SV=1[more]
BLAST of Cp4.1LG17g03260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKH9_CUCSA6.4e-11277.35Uncharacterized protein OS=Cucumis sativus GN=Csa_2G162660 PE=4 SV=1[more]
A0A067JC77_JATCU9.8e-6855.84Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06429 PE=4 SV=1[more]
B9RWP4_RICCO1.7e-5962.80GATA transcription factor, putative OS=Ricinus communis GN=RCOM_1023150 PE=4 SV=... [more]
F6HS48_VITVI1.7e-5952.79Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0051g00450 PE=4 SV=... [more]
A0A061ESZ5_THECC2.2e-5953.76GATA transcription factor 1, putative OS=Theobroma cacao GN=TCM_020437 PE=4 SV=1[more]
BLAST of Cp4.1LG17g03260 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G24050.16.7e-6049.63 GATA transcription factor 1[more]
AT5G25830.12.0e-3539.18 GATA transcription factor 12[more]
AT4G32890.13.3e-3540.61 GATA transcription factor 9[more]
AT3G60530.15.0e-3157.63 GATA transcription factor 4[more]
AT3G51080.11.5e-3038.71 GATA transcription factor 6[more]
BLAST of Cp4.1LG17g03260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659121561|ref|XP_008460722.1|6.8e-11578.75PREDICTED: GATA transcription factor 1 isoform X2 [Cucumis melo][more]
gi|659121559|ref|XP_008460721.1|1.7e-11378.47PREDICTED: GATA transcription factor 1 isoform X1 [Cucumis melo][more]
gi|449465254|ref|XP_004150343.1|9.3e-11277.35PREDICTED: GATA transcription factor 1 [Cucumis sativus][more]
gi|802796066|ref|XP_012092669.1|1.4e-6755.84PREDICTED: GATA transcription factor 1 [Jatropha curcas][more]
gi|720025636|ref|XP_010264014.1|1.7e-6051.20PREDICTED: GATA transcription factor 1 [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0008270zinc ion binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR013088Znf_NHR/GATA
IPR000679Znf_GATA
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0007623 circadian rhythm
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0044212 transcription regulatory region DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g03260.1Cp4.1LG17g03260.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000679Zinc finger, GATA-typePFAMPF00320GATAcoord: 187..221
score: 3.4
IPR000679Zinc finger, GATA-typeSMARTSM00401GATA_3coord: 181..231
score: 1.0
IPR000679Zinc finger, GATA-typePROSITEPS00344GATA_ZN_FINGER_1coord: 187..212
scor
IPR000679Zinc finger, GATA-typePROFILEPS50114GATA_ZN_FINGER_2coord: 181..217
score: 11
IPR013088Zinc finger, NHR/GATA-typeGENE3DG3DSA:3.30.50.10coord: 185..219
score: 2.8
NoneNo IPR availablePANTHERPTHR10071TRANSCRIPTION FACTOR GATA GATA BINDING FACTORcoord: 7..70
score: 2.9E-86coord: 95..262
score: 2.9
NoneNo IPR availablePANTHERPTHR10071:SF173SUBFAMILY NOT NAMEDcoord: 95..262
score: 2.9E-86coord: 7..70
score: 2.9
NoneNo IPR availableunknownSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 183..245
score: 9.03

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG17g03260CmaCh17G001200Cucurbita maxima (Rimu)cmacpeB388
Cp4.1LG17g03260CmaCh08G010400Cucurbita maxima (Rimu)cmacpeB916
Cp4.1LG17g03260CmoCh17G001230Cucurbita moschata (Rifu)cmocpeB351
Cp4.1LG17g03260CmoCh08G010110Cucurbita moschata (Rifu)cmocpeB853
Cp4.1LG17g03260Cla007645Watermelon (97103) v1cpewmB334
Cp4.1LG17g03260Csa2G162660Cucumber (Chinese Long) v2cpecuB306
Cp4.1LG17g03260MELO3C023076Melon (DHL92) v3.5.1cpemeB310
Cp4.1LG17g03260ClCG06G007510Watermelon (Charleston Gray)cpewcgB294
Cp4.1LG17g03260CSPI02G09680Wild cucumber (PI 183967)cpecpiB306
Cp4.1LG17g03260Lsi09G011690Bottle gourd (USVL1VR-Ls)cpelsiB254
Cp4.1LG17g03260MELO3C023076.2Melon (DHL92) v3.6.1cpemedB362
Cp4.1LG17g03260CsaV3_2G012140Cucumber (Chinese Long) v3cpecucB0377
Cp4.1LG17g03260Bhi12G001367Wax gourdcpewgoB0385
Cp4.1LG17g03260CsGy2G009850Cucumber (Gy14) v2cgybcpeB203
Cp4.1LG17g03260Carg11009Silver-seed gourdcarcpeB1503
Cp4.1LG17g03260Carg10126Silver-seed gourdcarcpeB0323
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG17g03260Cp4.1LG12g01010Cucurbita pepo (Zucchini)cpecpeB169
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG17g03260Cucurbita pepo (Zucchini)cpecpeB333
Cp4.1LG17g03260Cucurbita pepo (Zucchini)cpecpeB340
Cp4.1LG17g03260Cucurbita pepo (Zucchini)cpecpeB342
Cp4.1LG17g03260Cucumber (Gy14) v1cgycpeB0675
Cp4.1LG17g03260Cucurbita maxima (Rimu)cmacpeB266
Cp4.1LG17g03260Cucurbita maxima (Rimu)cmacpeB631
Cp4.1LG17g03260Cucurbita maxima (Rimu)cmacpeB824
Cp4.1LG17g03260Cucurbita moschata (Rifu)cmocpeB230
Cp4.1LG17g03260Cucurbita moschata (Rifu)cmocpeB580
Cp4.1LG17g03260Cucurbita moschata (Rifu)cmocpeB777
Cp4.1LG17g03260Wild cucumber (PI 183967)cpecpiB310
Cp4.1LG17g03260Wild cucumber (PI 183967)cpecpiB312
Cp4.1LG17g03260Cucumber (Chinese Long) v2cpecuB310
Cp4.1LG17g03260Bottle gourd (USVL1VR-Ls)cpelsiB267
Cp4.1LG17g03260Watermelon (Charleston Gray)cpewcgB293
Cp4.1LG17g03260Watermelon (Charleston Gray)cpewcgB306
Cp4.1LG17g03260Watermelon (97103) v1cpewmB331
Cp4.1LG17g03260Melon (DHL92) v3.5.1cpemeB316
Cp4.1LG17g03260Cucumber (Gy14) v2cgybcpeB352
Cp4.1LG17g03260Cucumber (Gy14) v2cgybcpeB354
Cp4.1LG17g03260Melon (DHL92) v3.6.1cpemedB371
Cp4.1LG17g03260Silver-seed gourdcarcpeB0333
Cp4.1LG17g03260Silver-seed gourdcarcpeB1096
Cp4.1LG17g03260Silver-seed gourdcarcpeB1330
Cp4.1LG17g03260Cucumber (Chinese Long) v3cpecucB0383
Cp4.1LG17g03260Cucumber (Chinese Long) v3cpecucB0385