Cp4.1LG17g03110 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCCTCTGCGTCGTCGCCGGCGGCTTCCTCCTCTGCCTCTACCTCTTGGTCCCGGAATCGGAGTCTCAAGATTGGTACTCCGTCGTCGGGATCATCTTGGTATCGACTCCATGGATGTTTTGGTTTTTGGTTTATTTGTATCATTGCCTCAAACCCATCAGAGTGCAGTCCAACGCCGCCTTGAGCCACTCCTCGAGCAGCAACCGACCGCCGTCCGTTGCCAATAACGGTGGCGGAATTGTAGCCAATCTTCCTCAAGTTGAATCGCCGGATTGTGATACGCCCGGTGATGGCAAACGACGTGTGCATTTTGGTGCAGTGGTTGTTAAGGGAAATAACCCACAAGGTGGTAAGAAATCTAGCCATGATAGCGGTTCGAAAGAACTGAGATCGAACGAGAGCGGAGCAACGTCGCCAACCCCATCTTCATAG ATGTTCCTCTGCGTCGTCGCCGGCGGCTTCCTCCTCTGCCTCTACCTCTTGGTCCCGGAATCGGAGTCTCAAGATTGGTACTCCGTCGTCGGGATCATCTTGGTATCGACTCCATGGATGTTTTGGTTTTTGGTTTATTTGTATCATTGCCTCAAACCCATCAGAGTGCAGTCCAACGCCGCCTTGAGCCACTCCTCGAGCAGCAACCGACCGCCGTCCGTTGCCAATAACGGTGGCGGAATTGTAGCCAATCTTCCTCAAGTTGAATCGCCGGATTGTGATACGCCCGGTGATGGCAAACGACGTGTGCATTTTGGTGCAGTGGTTGTTAAGGGAAATAACCCACAAGGTGGTAAGAAATCTAGCCATGATAGCGGTTCGAAAGAACTGAGATCGAACGAGAGCGGAGCAACGTCGCCAACCCCATCTTCATAG ATGTTCCTCTGCGTCGTCGCCGGCGGCTTCCTCCTCTGCCTCTACCTCTTGGTCCCGGAATCGGAGTCTCAAGATTGGTACTCCGTCGTCGGGATCATCTTGGTATCGACTCCATGGATGTTTTGGTTTTTGGTTTATTTGTATCATTGCCTCAAACCCATCAGAGTGCAGTCCAACGCCGCCTTGAGCCACTCCTCGAGCAGCAACCGACCGCCGTCCGTTGCCAATAACGGTGGCGGAATTGTAGCCAATCTTCCTCAAGTTGAATCGCCGGATTGTGATACGCCCGGTGATGGCAAACGACGTGTGCATTTTGGTGCAGTGGTTGTTAAGGGAAATAACCCACAAGGTGGTAAGAAATCTAGCCATGATAGCGGTTCGAAAGAACTGAGATCGAACGAGAGCGGAGCAACGTCGCCAACCCCATCTTCATAG MFLCVVAGGFLLCLYLLVPESESQDWYSVVGIILVSTPWMFWFLVYLYHCLKPIRVQSNAALSHSSSSNRPPSVANNGGGIVANLPQVESPDCDTPGDGKRRVHFGAVVVKGNNPQGGKKSSHDSGSKELRSNESGATSPTPSS
BLAST of Cp4.1LG17g03110 vs. TrEMBL
Match: A0A0A0LN77_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G120380 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 7.3e-25 Identity = 68/142 (47.89%), Postives = 91/142 (64.08%), Query Frame = 1
BLAST of Cp4.1LG17g03110 vs. TrEMBL
Match: W9R5B5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023849 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 3.3e-17 Identity = 59/145 (40.69%), Postives = 78/145 (53.79%), Query Frame = 1
BLAST of Cp4.1LG17g03110 vs. TrEMBL
Match: M5X7L6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021714mg PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 3.1e-15 Identity = 51/121 (42.15%), Postives = 71/121 (58.68%), Query Frame = 1
BLAST of Cp4.1LG17g03110 vs. TrEMBL
Match: W9QN73_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016947 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.2e-14 Identity = 54/139 (38.85%), Postives = 74/139 (53.24%), Query Frame = 1
BLAST of Cp4.1LG17g03110 vs. TrEMBL
Match: B9SDE0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1516870 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 3.7e-13 Identity = 43/117 (36.75%), Postives = 61/117 (52.14%), Query Frame = 1
BLAST of Cp4.1LG17g03110 vs. TAIR10
Match: AT5G17590.1 (AT5G17590.1 Putative membrane lipoprotein) HSP 1 Score: 62.0 bits (149), Expect = 3.5e-10 Identity = 45/128 (35.16%), Postives = 66/128 (51.56%), Query Frame = 1
BLAST of Cp4.1LG17g03110 vs. NCBI nr
Match: gi|700206302|gb|KGN61421.1| (hypothetical protein Csa_2G120380 [Cucumis sativus]) HSP 1 Score: 121.7 bits (304), Expect = 1.0e-24 Identity = 68/142 (47.89%), Postives = 91/142 (64.08%), Query Frame = 1
BLAST of Cp4.1LG17g03110 vs. NCBI nr
Match: gi|449442459|ref|XP_004138999.1| (PREDICTED: uncharacterized protein LOC101203715 [Cucumis sativus]) HSP 1 Score: 121.7 bits (304), Expect = 1.0e-24 Identity = 68/142 (47.89%), Postives = 91/142 (64.08%), Query Frame = 1
BLAST of Cp4.1LG17g03110 vs. NCBI nr
Match: gi|703103359|ref|XP_010097708.1| (hypothetical protein L484_023849 [Morus notabilis]) HSP 1 Score: 96.3 bits (238), Expect = 4.7e-17 Identity = 59/145 (40.69%), Postives = 78/145 (53.79%), Query Frame = 1
BLAST of Cp4.1LG17g03110 vs. NCBI nr
Match: gi|1009110357|ref|XP_015895163.1| (PREDICTED: uncharacterized protein LOC107429042 [Ziziphus jujuba]) HSP 1 Score: 93.2 bits (230), Expect = 4.0e-16 Identity = 56/159 (35.22%), Postives = 82/159 (51.57%), Query Frame = 1
BLAST of Cp4.1LG17g03110 vs. NCBI nr
Match: gi|694397200|ref|XP_009373859.1| (PREDICTED: uncharacterized protein LOC103962815 [Pyrus x bretschneideri]) HSP 1 Score: 89.7 bits (221), Expect = 4.4e-15 Identity = 44/119 (36.97%), Postives = 64/119 (53.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |