Cp4.1LG17g02740 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG17g02740
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCp4.1LG17 : 2077328 .. 2080796 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCTTCTTCGATTGAATGGAACTGGAAGTAACAGAATGAAAAATCTTCATGTTCTTTTCAAGCCAAGGATTGCCTTCTTCAATTCAACGTCTTCTTCATCATCACCTCAGATTTCATCTCAGGAAACCCATTTCATCGATCTAATACATGCTTCCGATTCGACCCACAAGCTTCGTCAGATCCATGGTCAACTCTACCGCTGTAACATCTTCTCCAGCAGCCGGGTCGTGACCCAGTTCATCTCTTCGTGTTCTTCGTTAAATTCTGTCGACTATGCGGTTTTGATCTTCCAGCGGTTCGAGTTGAAGAATAGTTTCCTCTTCAATGCATTGATTCGAGGACTCGCTGAAAATTCCAGGTTCGAGAGCTCAATTGCTTACTTTGTTTGCATGCTGAGGTGGGAAATTAGCCCTGATAGGCTTACTTTTCCGTTTGTGCTCAAATCAGCGGCGGCTCTTTCCAATGGTGGCGTTGGGAGTGCTTTACATTCTGGGATTGTGAAATTTGGACTTGAATTTGATTCTTTTGTGAGGGTTTCGTTGGTGGACATGTACGTGAAAGTTGACGATTTGGGTTCTGCCTTGAAGGTGTTTGATGAAAGTCCTGACAGAATTAAGAAGGAAAATGTGTTGATTTGGAATGTTCTTATTCATGGGTATTGTAGAGTGGGGAATTTGGTAAAAGCTACGGAGCTATTCGAGACAATGCCTAAGAAGGATACAGGTTCTTGGAATAGTTTGATTAATGGCTTCATGAGAAAGGGGCAGTTGGGTCCAGCAAACGAACTGTTTGAGAAAATGCCTGAAAAGAATGTGGTTTCTTGGACTACAATGGTGAATGGATTTTCACAGAATGGAGACCCTGAAAAGGCACTGCAATTTTTCTTTTGTATGCTCGAAGAAGGCGCACGGCCGAACGATTACACAATTGTCTCTGCACTTTCAGCTTGTGCAAAACTTGGTGCCTTAGATGCTGGTTTAAGGATCCATAGATACCTTTCAAGCCATGGTTTCAAATTGAATCAAACGATTGGAACTGCACTTGTGGATATGTATGCAAAATGTGGAAACATTGAGTCTGCAGGAGAGGTGTTTCGTGAAATAAAACAAAAGGGTCTTCTTACTTGGAGTGTTATGATCTGGGGCTGGGCTATCCATGGACATTTTAAGAAATCTATACAATACTTTGAATGGATGAAGTCTACAGGTTTAACTTCATTTTGCGTTTGTTATTCTCTGAAGTTTATTCTTTGTTGTCCATAACTCAAAACTCGGTATGTTTGCAGGAACAAAGCCAGATGGGGTGGTGTTTCTAGCTGTTCTTACTGCTTGCTCACATTCTGGACAAGTAGACGATGGACTCGAGTTTTTCGACAGTATGAGGCGAGACTACTTGATTGAGCCTTCTATGAAGCATTACACTCTGATTGTAGACATGCTAGGAAGGGCTGGTAGACTAGATGAAGCTCTAAAGTTCCTAAGAGACATGCCTATCAATCCGGATTTTGTGGTCTGGGGTGCTCTATTTTGTGCTTGCAGGGCTCATAAGAACATTAAAATGGCCGAATTAGCATCCGAAAAGCTTCTTGAACTTGAACCGAAGCATCCGGGGAGTTACGTATTTTTGTCGAATGCATATGCTGCTGTAGGAAGATGGGAAGATGCAGAGAGAGTGAGAGTTTCAATGCGAGATCGAGGTGCACAAAAGGATCCAGGATGGAGCTTCATGGAAGTGGATGATAAGTTACATAGATTTGTGGCTGGTGATAATACTCATAACCGTGCCCAAGAGATATACTCGAAATTAGATGAGATAAATGCAGGTGCCAGGGAAAAAGGATACACAAAAGGAATTGAGTGTGTTCTTCATAACATTGAAGAGGAAGAGAAGGAAGAAGCACTGGGACATCACAGCGAGAAGTTGGCGCTTGCTTTCGGGCTCGTTAGTACAGCCCCGGAAACGACGATTAGGATAGTGAAAAACCTTAGAGTTTGTGTGGATTGTCATTCATTCATGAAATATGCAAGTAAAATGAGCCAGAGAGAGATCATTCTGCGGGATATGAAACGATTTCATCATTTTCATGATGGGGTTTGTTCATGTGGAGATTATTGGTAAAAGATTGTTGATCAGAGAAGGTGGAACTACTGATGCTTTTGTTACTGAGGTTGCCACTTATAGCTAAGCCTACTCCCATACTTCTCGAATCTCCGTTCTCGCAAAATTCTCGACATCAAACCATTTTCGAGATATTCGGCTCCGTTTTTAACTCTCACCAGGCTTTGTTGGATGAAAAGAAAAGTTGAAAAGTCCCACATCGGCTAATTCCTTAGGGAATGTTCATGGGTTTTCAAGGAATACTCCCTCCATTGGTATGAGACCTCTTGGGGAAAAGTCCCGCATCTGCCAATTTAGGGAATGTTCATGGGTTTTCAAGGAATACTCTCTCCATTGGTATGAAGCATTTTGGGGAAGCCCAAAGCAAAGCCACAAGAGCTTATGCTCAAAGTAGACAATATCATACCATTGAGCAAAGCCACGAGAGCTTATTCTCAAAGTCATACCATTGTGGAGAGTCGTGTTTGTCTAACACACTCATCGATTAATTTTGATCAACTCCCTTGTAGGTTTGTTCTTTTCCTCTTGATGATCGTTGGTTATATTCGTTAGTTCTTCTCTTAATTCCATGGTCTACTTGCCAATCTGCTAGAGTTTCTTTTTCATTAATTCGTTGATTGAACGTTTGAATTCGAGTCGTTGAGTTTAATTTCGTGTTCTTGGTTTCTTTTTCTTGTTGTTTGTTGATCGGGAGAGTGGTAAAAGTTCGTTAACTTAAATTGTTAAGGCTATTTTGTTTGTCTCGATTATGTTTATGGCATGAACAGTGGGAGTTTTGCCTTAGATTTTCATAATTCTGTGGTTGATTGTTTTAAAATTAAAGGAGTCTGACTTTCGTGGATTGTAGTTTCAGGACTGATGGCTAAGAGCTCTACTTCAAGCAAGAGCATGATGATCTTGGTAAGGAAGCAATCAGTTATTGATGATGTTCTTTGATTTCTTCCCCCAAAACCTAGAAAAATCCTAACCCCGTCGCGAATTGGTGGTTTCCAGCCATGTGAAACGCCGTCGGAGGCGGACATTGATGATGGTTTCCGTCGAGGTTAAATGGCGACGTCGGCGGCAACAGAGCCTTACCGGTTCGGACCGCCGTCGATTTCTCGAATTTCTCCGCTACTTCGGCTCTCAAACCCATCAATGGCAATCGAAACCCCCCTCGATTCTTCCAATCTCATCCCTTCCATAGACTCCTCTCATCCGGATGACCGCAACAAAAGAGCTTACCGGAGGGAGAGAAGAAGAATGGGATATTAGGATACCAGGTGTTAGCTCTGATACCAATTGTTAGGATCGCTCAACAACGCTTACACTCAATCAAGATGAATCCAACAAATCGGAGAGAGAAAA

mRNA sequence

ATGCTTCTTCTTCGATTGAATGGAACTGGAAGTAACAGAATGAAAAATCTTCATGTTCTTTTCAAGCCAAGGATTGCCTTCTTCAATTCAACGTCTTCTTCATCATCACCTCAGATTTCATCTCAGGAAACCCATTTCATCGATCTAATACATGCTTCCGATTCGACCCACAAGCTTCGTCAGATCCATGGTCAACTCTACCGCTGTAACATCTTCTCCAGCAGCCGGGTCGTGACCCAGTTCATCTCTTCGTGTTCTTCGTTAAATTCTGTCGACTATGCGGTTTTGATCTTCCAGCGGTTCGAGTTGAAGAATAGTTTCCTCTTCAATGCATTGATTCGAGGACTCGCTGAAAATTCCAGGTTCGAGAGCTCAATTGCTTACTTTGTTTGCATGCTGAGGTGGGAAATTAGCCCTGATAGGCTTACTTTTCCGTTTGTGCTCAAATCAGCGGCGGCTCTTTCCAATGGTGGCGTTGGGAGTGCTTTACATTCTGGGATTGTGAAATTTGGACTTGAATTTGATTCTTTTGTGAGGGTTTCGTTGGTGGACATGTACGTGAAAGTTGACGATTTGGGTTCTGCCTTGAAGGTGTTTGATGAAAGTCCTGACAGAATTAAGAAGGAAAATGTGTTGATTTGGAATGTTCTTATTCATGGGTATTGTAGAGTGGGGAATTTGGTAAAAGCTACGGAGCTATTCGAGACAATGCCTAAGAAGGATACAGGTTCTTGGAATAGTTTGATTAATGGCTTCATGAGAAAGGGGCAGTTGGGTCCAGCAAACGAACTGTTTGAGAAAATGCCTGAAAAGAATGTGGTTTCTTGGACTACAATGGTGAATGGATTTTCACAGAATGGAGACCCTGAAAAGGCACTGCAATTTTTCTTTTGTATGCTCGAAGAAGGCGCACGGCCGAACGATTACACAATTGTCTCTGCACTTTCAGCTTGTGCAAAACTTGGACTGATGGCTAAGAGCTCTACTTCAAGCAAGAGCATGATGATCTTGGTAAGGAAGCAATCAGTTATTGATGATGTTCTTTGATTTCTTCCCCCAAAACCTAGAAAAATCCTAACCCCGTCGCGAATTGGTGGTTTCCAGCCATGTGAAACGCCGTCGGAGGCGGACATTGATGATGGTTTCCGTCGAGGTTAAATGGCGACGTCGGCGGCAACAGAGCCTTACCGGTTCGGACCGCCGTCGATTTCTCGAATTTCTCCGCTACTTCGGCTCTCAAACCCATCAATGGCAATCGAAACCCCCCTCGATTCTTCCAATCTCATCCCTTCCATAGACTCCTCTCATCCGGATGACCGCAACAAAAGAGCTTACCGGAGGGAGAGAAGAAGAATGGGATATTAGGATACCAGGTGTTAGCTCTGATACCAATTGTTAGGATCGCTCAACAACGCTTACACTCAATCAAGATGAATCCAACAAATCGGAGAGAGAAAA

Coding sequence (CDS)

ATGCTTCTTCTTCGATTGAATGGAACTGGAAGTAACAGAATGAAAAATCTTCATGTTCTTTTCAAGCCAAGGATTGCCTTCTTCAATTCAACGTCTTCTTCATCATCACCTCAGATTTCATCTCAGGAAACCCATTTCATCGATCTAATACATGCTTCCGATTCGACCCACAAGCTTCGTCAGATCCATGGTCAACTCTACCGCTGTAACATCTTCTCCAGCAGCCGGGTCGTGACCCAGTTCATCTCTTCGTGTTCTTCGTTAAATTCTGTCGACTATGCGGTTTTGATCTTCCAGCGGTTCGAGTTGAAGAATAGTTTCCTCTTCAATGCATTGATTCGAGGACTCGCTGAAAATTCCAGGTTCGAGAGCTCAATTGCTTACTTTGTTTGCATGCTGAGGTGGGAAATTAGCCCTGATAGGCTTACTTTTCCGTTTGTGCTCAAATCAGCGGCGGCTCTTTCCAATGGTGGCGTTGGGAGTGCTTTACATTCTGGGATTGTGAAATTTGGACTTGAATTTGATTCTTTTGTGAGGGTTTCGTTGGTGGACATGTACGTGAAAGTTGACGATTTGGGTTCTGCCTTGAAGGTGTTTGATGAAAGTCCTGACAGAATTAAGAAGGAAAATGTGTTGATTTGGAATGTTCTTATTCATGGGTATTGTAGAGTGGGGAATTTGGTAAAAGCTACGGAGCTATTCGAGACAATGCCTAAGAAGGATACAGGTTCTTGGAATAGTTTGATTAATGGCTTCATGAGAAAGGGGCAGTTGGGTCCAGCAAACGAACTGTTTGAGAAAATGCCTGAAAAGAATGTGGTTTCTTGGACTACAATGGTGAATGGATTTTCACAGAATGGAGACCCTGAAAAGGCACTGCAATTTTTCTTTTGTATGCTCGAAGAAGGCGCACGGCCGAACGATTACACAATTGTCTCTGCACTTTCAGCTTGTGCAAAACTTGGACTGATGGCTAAGAGCTCTACTTCAAGCAAGAGCATGATGATCTTGGTAAGGAAGCAATCAGTTATTGATGATGTTCTTTGA

Protein sequence

MLLLRLNGTGSNRMKNLHVLFKPRIAFFNSTSSSSSPQISSQETHFIDLIHASDSTHKLRQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSIAYFVCMLRWEISPDRLTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFDSFVRVSLVDMYVKVDDLGSALKVFDESPDRIKKENVLIWNVLIHGYCRVGNLVKATELFETMPKKDTGSWNSLINGFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGARPNDYTIVSALSACAKLGLMAKSSTSSKSMMILVRKQSVIDDVL
BLAST of Cp4.1LG17g02740 vs. Swiss-Prot
Match: PPR10_ARATH (Pentatricopeptide repeat-containing protein At1g04840 OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 3.6e-87
Identity = 167/314 (53.18%), Postives = 222/314 (70.70%), Query Frame = 1

Query: 14  MKNLHVLFKPRIAFFNSTSSSSSP---QISSQETHFIDLIHASDSTHKLRQIHGQLYRCN 73
           MK+L V+FKP+    +S +    P   Q S  E+HFI LIHA   T  LR +H Q+ R  
Sbjct: 1   MKSLSVIFKPK----SSPAKIYFPADRQASPDESHFISLIHACKDTASLRHVHAQILRRG 60

Query: 74  IFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSIAYFV 133
           + SS RV  Q +S  S L S DY++ IF+  E +N F+ NALIRGL EN+RFESS+ +F+
Sbjct: 61  VLSS-RVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFI 120

Query: 134 CMLRWEISPDRLTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFDSFVRVSLVDMYVKVD 193
            MLR  + PDRLTFPFVLKS + L    +G ALH+  +K  ++ DSFVR+SLVDMY K  
Sbjct: 121 LMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTG 180

Query: 194 DLGSALKVFDESPDRIKKENVLIWNVLIHGYCRVGNLVKATELFETMPKKDTGSWNSLIN 253
            L  A +VF+ESPDRIKKE++LIWNVLI+GYCR  ++  AT LF +MP++++GSW++LI 
Sbjct: 181 QLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIK 240

Query: 254 GFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGARPNDYT 313
           G++  G+L  A +LFE MPEKNVVSWTT++NGFSQ GD E A+  +F MLE+G +PN+YT
Sbjct: 241 GYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYT 300

Query: 314 IVSALSACAKLGLM 325
           I + LSAC+K G +
Sbjct: 301 IAAVLSACSKSGAL 309

BLAST of Cp4.1LG17g02740 vs. Swiss-Prot
Match: PPR15_ARATH (Pentatricopeptide repeat-containing protein At1g06145 OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2)

HSP 1 Score: 166.4 bits (420), Expect = 5.6e-40
Identity = 99/315 (31.43%), Postives = 167/315 (53.02%), Query Frame = 1

Query: 12  NRMKNLHVLFKP--RIAFFNSTSSSSSPQISSQETHFIDLIHASDSTHKLRQIHGQLYRC 71
           N   N+H L  P   +  F+++ S + P +         +I    +   L      + + 
Sbjct: 2   NAFANVHSLRVPSHHLRDFSASLSLAPPNLKK-------IIKQCSTPKLLESALAAMIKT 61

Query: 72  NIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSIAYF 131
           ++    R++ QFI++C+S   +D AV    + +  N F++NAL +G    S    S+  +
Sbjct: 62  SLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELY 121

Query: 132 VCMLRWEISPDRLTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFDSFVRVSLVDMYVKV 191
           V MLR  +SP   T+  ++K+++  S    G +L + I KFG  F   ++ +L+D Y   
Sbjct: 122 VRMLRDSVSPSSYTYSSLVKASSFASR--FGESLQAHIWKFGFGFHVKIQTTLIDFYSAT 181

Query: 192 DDLGSALKVFDESPDRIKKENVLIWNVLIHGYCRVGNLVKATELFETMPKKDTGSWNSLI 251
             +  A KVFDE P+R    + + W  ++  Y RV ++  A  L   M +K+  + N LI
Sbjct: 182 GRIREARKVFDEMPER----DDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLI 241

Query: 252 NGFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGARPNDY 311
           NG+M  G L  A  LF +MP K+++SWTTM+ G+SQN    +A+  F+ M+EEG  P++ 
Sbjct: 242 NGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEV 301

Query: 312 TIVSALSACAKLGLM 325
           T+ + +SACA LG++
Sbjct: 302 TMSTVISACAHLGVL 303

BLAST of Cp4.1LG17g02740 vs. Swiss-Prot
Match: PP403_ARATH (Putative pentatricopeptide repeat-containing protein At5g37570 OS=Arabidopsis thaliana GN=PCMP-E37 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.2e-39
Identity = 99/317 (31.23%), Postives = 168/317 (53.00%), Query Frame = 1

Query: 35  SSPQISSQETHFIDLIHASDSTHKLRQIHGQLYRCNIFSSSRVVTQFISSCSSLNS-VDY 94
           S P + S ET    L     S   L QIH ++ R  +     +++ FISS SS +S + Y
Sbjct: 6   SHPSLLSLET----LFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSY 65

Query: 95  AVLIFQRFELKNSFLFNALIRGLAENSRFESSIAYFVCMLRWEIS-PDRLTFPFVLKSAA 154
           +  +F+R     ++L+N LI+G +    F  +++  + M+R  ++ PD  TFP V+K  +
Sbjct: 66  SSSVFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCS 125

Query: 155 ALSNGGVGSALHSGIVKFGLEFDSFVRVSLVDMYVKVDDLGSALKVFDESPDR------- 214
                 VGS++H  +++ G + D  V  S VD Y K  DL SA KVF E P+R       
Sbjct: 126 NNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTA 185

Query: 215 --------------------IKKENVLIWNVLIHGYCRVGNLVKATELFETMPKKDTGSW 274
                               + + N+  WN L+ G  + G+LV A +LF+ MPK+D  S+
Sbjct: 186 LVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISY 245

Query: 275 NSLINGFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGAR 323
            S+I+G+ + G +  A +LFE+    +V +W+ ++ G++QNG P +A + F  M  +  +
Sbjct: 246 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 305

BLAST of Cp4.1LG17g02740 vs. Swiss-Prot
Match: PPR43_ARATH (Pentatricopeptide repeat-containing protein At1g14470 OS=Arabidopsis thaliana GN=PCMP-A4 PE=2 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 3.1e-38
Identity = 98/264 (37.12%), Postives = 142/264 (53.79%), Query Frame = 1

Query: 58  KLRQIHGQLYRCNIFS-SSRVVTQFISSCSSLNSVDYAV-LIFQRFELKNSFLFNALIRG 117
           +L QIH QL   N     S   ++ IS C+ L +  Y   LIF      N F+ N++ + 
Sbjct: 21  QLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKY 80

Query: 118 LAENSRFESSIAYFVCMLRWEISPDRLTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFD 177
            ++       +  +    R  I PD  +FP V+KSA     G  G    + + K G   D
Sbjct: 81  FSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSA-----GRFGILFQALVEKLGFFKD 140

Query: 178 SFVRVSLVDMYVKVDDLGSALKVFDESPDRIKKENVLIWNVLIHGYCRVGNLVKATELFE 237
            +VR  ++DMYVK + + SA KVFD+   R   +    WNV+I GY + GN  +A +LF+
Sbjct: 141 PYVRNVIMDMYVKHESVESARKVFDQISQRKGSD----WNVMISGYWKWGNKEEACKLFD 200

Query: 238 TMPKKDTGSWNSLINGFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQF 297
            MP+ D  SW  +I GF +   L  A + F++MPEK+VVSW  M++G++QNG  E AL+ 
Sbjct: 201 MMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRL 260

Query: 298 FFCMLEEGARPNDYTIVSALSACA 320
           F  ML  G RPN+ T V  +SAC+
Sbjct: 261 FNDMLRLGVRPNETTWVIVISACS 275

BLAST of Cp4.1LG17g02740 vs. Swiss-Prot
Match: PP385_ARATH (Pentatricopeptide repeat-containing protein At5g15300 OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 2.0e-37
Identity = 89/266 (33.46%), Postives = 150/266 (56.39%), Query Frame = 1

Query: 59  LRQIHGQLYRCNIFSSSRVVTQFI--SSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGL 118
           L+QIH  +    + S+  VV + I  +S S   ++ YA  +F      +  + N ++RG 
Sbjct: 28  LKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGS 87

Query: 119 AENSRFESSIAYFVCMLRWEISPDRLTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFDS 178
           A++ + E +++ +  M +  +SPDR TF FVLK+ + L     G A H  +V+ G   + 
Sbjct: 88  AQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNE 147

Query: 179 FVRVSLVDMYVKVDDLGSALKVFDESPDRIKKENVLIWNVLIHGYCRVGNLVKATELFET 238
           +V+ +L+  +    DLG A ++FD+S     K + + W+ +  GY + G + +A  LF+ 
Sbjct: 148 YVKNALILFHANCGDLGIASELFDDSA----KAHKVAWSSMTSGYAKRGKIDEAMRLFDE 207

Query: 239 MPKKDTGSWNSLINGFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFF 298
           MP KD  +WN +I G ++  ++  A ELF++  EK+VV+W  M++G+   G P++AL  F
Sbjct: 208 MPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIF 267

Query: 299 FCMLEEGARPNDYTIVSALSACAKLG 323
             M + G  P+  TI+S LSACA LG
Sbjct: 268 KEMRDAGEHPDVVTILSLLSACAVLG 289

BLAST of Cp4.1LG17g02740 vs. TrEMBL
Match: A0A0A0LI86_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G139850 PE=4 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 8.1e-155
Identity = 274/323 (84.83%), Postives = 301/323 (93.19%), Query Frame = 1

Query: 2   LLLRLNGTGSNRMKNLHVLFKPRIAFFNSTSSSSSPQISSQETHFIDLIHASDSTHKLRQ 61
           +LLR NG+GSN MK+LHVLF PRIAFF+S  SSSSP IS  ETHFIDLIHAS+STHKLRQ
Sbjct: 1   MLLRRNGSGSNIMKDLHVLFNPRIAFFSSMFSSSSPPISFLETHFIDLIHASNSTHKLRQ 60

Query: 62  IHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSR 121
           IHGQLYRCN+FSSSRVVTQFISSCSSLNSVDYA+ IFQRFELKNS+LFNALIRGLAENSR
Sbjct: 61  IHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSR 120

Query: 122 FESSIAYFVCMLRWEISPDRLTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFDSFVRVS 181
           FESSI++FV ML+W+ISPDRLTFPFVLKSAAALSNGGVG ALH GI+KFGLEFDSFVRVS
Sbjct: 121 FESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVS 180

Query: 182 LVDMYVKVDDLGSALKVFDESPDRIKKENVLIWNVLIHGYCRVGNLVKATELFETMPKKD 241
           LVDMYVKV++LGSALKVFDESP+ +K  +VLIWNVLIHGYCR+G+LVKATELF++MPKKD
Sbjct: 181 LVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKD 240

Query: 242 TGSWNSLINGFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLE 301
           TGSWNSLINGFM+ G +G A ELF KMPEKNVVSWTTMVNGFSQNGDPEKAL+ FFCMLE
Sbjct: 241 TGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLE 300

Query: 302 EGARPNDYTIVSALSACAKLGLM 325
           EGARPNDYTIVSALSACAK+G +
Sbjct: 301 EGARPNDYTIVSALSACAKIGAL 323

BLAST of Cp4.1LG17g02740 vs. TrEMBL
Match: F6GWJ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0029g01130 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 1.5e-103
Identity = 197/319 (61.76%), Postives = 242/319 (75.86%), Query Frame = 1

Query: 11  SNRMKNLHVLFKP-----RIAFFNSTSSSSSPQISSQETHFIDLIHASDSTHKLRQIHGQ 70
           S  +K L+ LFKP     +     +T+ +  P   S ETHFI LIHAS++  +L QIH Q
Sbjct: 4   SQGLKALNALFKPTSPPAKTTTVTTTTRAHGPS-RSPETHFIPLIHASNTLPQLHQIHAQ 63

Query: 71  LYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESS 130
           ++  N+FS+SRVVTQ ISS  SL S+DYA+ IF+ F+  N F+FNALIRGLAENSRFE S
Sbjct: 64  IFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGS 123

Query: 131 IAYFVCMLRWEISPDRLTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFDSFVRVSLVDM 190
           +++FV MLR  I PDRLT PFVLKS AAL + G+G  LH G++K GLEFDSFVRVSLVDM
Sbjct: 124 VSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDM 183

Query: 191 YVKVDDLGSALKVFDESPDRIKKENVLIWNVLIHGYCRVGNLVKATELFETMPKKDTGSW 250
           YVK+ +LG  L++FDESP R K E++L+WNVLI+G C+VG+L KA  LFE MP+++ GSW
Sbjct: 184 YVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSW 243

Query: 251 NSLINGFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGAR 310
           NSLINGF+R G L  A ELF +MPEKNVVSWTTM+NGFSQNGD EKAL  F+ MLEEG R
Sbjct: 244 NSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVR 303

Query: 311 PNDYTIVSALSACAKLGLM 325
           PND T+VSAL AC K+G +
Sbjct: 304 PNDLTVVSALLACTKIGAL 321

BLAST of Cp4.1LG17g02740 vs. TrEMBL
Match: A0A067KWK1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01110 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 1.2e-97
Identity = 186/318 (58.49%), Postives = 237/318 (74.53%), Query Frame = 1

Query: 14  MKNLHVLFKPRIAFFNSTSS---SSSPQIS----SQETHFIDLIHASDSTHKLRQIHGQL 73
           M++ H LFK + +   +TSS   +SSP  +      ETH I LIHAS ++ +L QIH Q+
Sbjct: 1   MRSRHALFKAKNSPAKTTSSREPTSSPNKALSQNPSETHLISLIHASKTSRQLHQIHAQI 60

Query: 74  YRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSI 133
           +  N+ +SS++ TQ ISS SS   +DYA+ +F  +  KNSFLFNALIRGL  NS FES+I
Sbjct: 61  FLHNLSTSSQIATQLISSSSSRKFIDYAITVFNHYYPKNSFLFNALIRGLTNNSLFESAI 120

Query: 134 AYFVCMLRWEISPDRLTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFDSFVRVSLVDMY 193
           ++F+ MLR ++ PD+LT+PFVLKS A L + G+G ALH  I K G EFD FVR+S+VD Y
Sbjct: 121 SHFILMLRSDVKPDQLTYPFVLKSIATLCSEGLGRALHGMIYKSGFEFDLFVRISMVDAY 180

Query: 194 VKVDDLGSALKVFDESPDRIKKENVLIWNVLIHGYCRVGNLVKATELFETMPKKDTGSWN 253
           VKV++LGSALK+FDESP R   E+ L+WNVLI+G C+VG++ KA +LFETMP++ T SWN
Sbjct: 181 VKVEELGSALKLFDESPQRFYGESTLLWNVLINGCCKVGSMRKAVDLFETMPERTTASWN 240

Query: 254 SLINGFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGARP 313
           SLINGF+R G L  ANELF +MPEKNVVSWTTMVNG S NGD EKAL  F  ML+ G +P
Sbjct: 241 SLINGFLRSGDLERANELFGRMPEKNVVSWTTMVNGLSHNGDHEKALSLFSKMLQVGVKP 300

Query: 314 NDYTIVSALSACAKLGLM 325
           ND+TIVSALSACAK+G +
Sbjct: 301 NDFTIVSALSACAKIGAL 318

BLAST of Cp4.1LG17g02740 vs. TrEMBL
Match: A0A061EK73_THECC (Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_020290 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 6.8e-93
Identity = 180/303 (59.41%), Postives = 226/303 (74.59%), Query Frame = 1

Query: 22  KPRIAFFNSTSSSSSPQISSQETHFIDLIHASDSTHKLRQIHGQLYRCNIFSSSRVVTQF 81
           KP I+  +S+SSS  P     +THF  LI +S +T +LRQIH Q++R N+ SSS + T  
Sbjct: 28  KPPISHGSSSSSSQDPL----KTHFASLIQSSKTTLQLRQIHAQIFRRNLSSSSNLTTLL 87

Query: 82  ISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSIAYFVCMLRWEISPDR 141
           IS+ SSL S+ YA+ +F  F  K+ FLFNALIRGL +NS  ESSI++F+ ML   + PD+
Sbjct: 88  ISASSSLKSIPYAISLFNHFHHKSIFLFNALIRGLTDNSLLESSISHFLLMLSLGVRPDK 147

Query: 142 LTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFDSFVRVSLVDMYVKVDDLGSALKVFDE 201
           LT+PFVLKS A L    +G  LH  I+K G+EFDSFVRV+LV+MYVK+ +LG AL+VFDE
Sbjct: 148 LTYPFVLKSIAGLGLRCLGLILHGRIIKSGVEFDSFVRVALVEMYVKLKELGFALQVFDE 207

Query: 202 SPDRIKKENVLIWNVLIHGYCRVGNLVKATELFETMPKKDTGSWNSLINGFMRKGQLGPA 261
           SP+R K  ++L+WNVLI+GYC+ GNL KA ELFE  P+++ GSWNSLINGFMR G L  A
Sbjct: 208 SPERNKSGSILLWNVLINGYCKDGNLGKAMELFEATPERNIGSWNSLINGFMRNGDLDKA 267

Query: 262 NELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGARPNDYTIVSALSACAKL 321
            ELF++M EK+VVSWTTMVNGFSQNGD EKAL  FF MLE   RPND T+V ALSACAK+
Sbjct: 268 VELFDEMKEKDVVSWTTMVNGFSQNGDHEKALSMFFKMLEAALRPNDLTLVPALSACAKI 326

Query: 322 GLM 325
           G +
Sbjct: 328 GAL 326

BLAST of Cp4.1LG17g02740 vs. TrEMBL
Match: A0A0D2PM74_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G031300 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.7e-91
Identity = 175/303 (57.76%), Postives = 225/303 (74.26%), Query Frame = 1

Query: 22  KPRIAFFNSTSSSSSPQISSQETHFIDLIHASDSTHKLRQIHGQLYRCNIFSSSRVVTQF 81
           KP      S SS SS      +THF  LI ++++T +LRQIH Q+ R ++ SS+ + T  
Sbjct: 44  KPSSISNGSDSSQSSSSQDPLKTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANLTTLL 103

Query: 82  ISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSIAYFVCMLRWEISPDR 141
           IS  SSL S+ YA+ IF     K+ FLFNALIRGL ENS F+SS+++F+ MLR  + PD+
Sbjct: 104 ISVSSSLKSIPYALSIFNNSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRHRVRPDK 163

Query: 142 LTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFDSFVRVSLVDMYVKVDDLGSALKVFDE 201
           LT+PFVLKS A L    +G  LH  I+K G+EFDSFVRVSLV+MYVK++++G AL+VFDE
Sbjct: 164 LTYPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDE 223

Query: 202 SPDRIKKENVLIWNVLIHGYCRVGNLVKATELFETMPKKDTGSWNSLINGFMRKGQLGPA 261
           SP+R K E++L+WNVLI+G CRVG+L KATELFE MP+++ GSWNS ING M+ G L  A
Sbjct: 224 SPERNKSESILLWNVLINGCCRVGDLEKATELFEAMPERNIGSWNSFINGLMKNGDLNKA 283

Query: 262 NELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGARPNDYTIVSALSACAKL 321
            +LF++M EK+VVSWTT+VNG SQNGD +KAL  FF MLE G RPND T+VSALSACAK+
Sbjct: 284 MQLFDEMKEKDVVSWTTIVNGLSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKI 343

Query: 322 GLM 325
           G +
Sbjct: 344 GAL 346

BLAST of Cp4.1LG17g02740 vs. TAIR10
Match: AT1G04840.1 (AT1G04840.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 323.2 bits (827), Expect = 2.0e-88
Identity = 167/314 (53.18%), Postives = 222/314 (70.70%), Query Frame = 1

Query: 14  MKNLHVLFKPRIAFFNSTSSSSSP---QISSQETHFIDLIHASDSTHKLRQIHGQLYRCN 73
           MK+L V+FKP+    +S +    P   Q S  E+HFI LIHA   T  LR +H Q+ R  
Sbjct: 1   MKSLSVIFKPK----SSPAKIYFPADRQASPDESHFISLIHACKDTASLRHVHAQILRRG 60

Query: 74  IFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSIAYFV 133
           + SS RV  Q +S  S L S DY++ IF+  E +N F+ NALIRGL EN+RFESS+ +F+
Sbjct: 61  VLSS-RVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFI 120

Query: 134 CMLRWEISPDRLTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFDSFVRVSLVDMYVKVD 193
            MLR  + PDRLTFPFVLKS + L    +G ALH+  +K  ++ DSFVR+SLVDMY K  
Sbjct: 121 LMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTG 180

Query: 194 DLGSALKVFDESPDRIKKENVLIWNVLIHGYCRVGNLVKATELFETMPKKDTGSWNSLIN 253
            L  A +VF+ESPDRIKKE++LIWNVLI+GYCR  ++  AT LF +MP++++GSW++LI 
Sbjct: 181 QLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIK 240

Query: 254 GFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGARPNDYT 313
           G++  G+L  A +LFE MPEKNVVSWTT++NGFSQ GD E A+  +F MLE+G +PN+YT
Sbjct: 241 GYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYT 300

Query: 314 IVSALSACAKLGLM 325
           I + LSAC+K G +
Sbjct: 301 IAAVLSACSKSGAL 309

BLAST of Cp4.1LG17g02740 vs. TAIR10
Match: AT1G06150.1 (AT1G06150.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 166.4 bits (420), Expect = 3.1e-41
Identity = 99/315 (31.43%), Postives = 167/315 (53.02%), Query Frame = 1

Query: 12   NRMKNLHVLFKP--RIAFFNSTSSSSSPQISSQETHFIDLIHASDSTHKLRQIHGQLYRC 71
            N   N+H L  P   +  F+++ S + P +         +I    +   L      + + 
Sbjct: 747  NAFANVHSLRVPSHHLRDFSASLSLAPPNLKK-------IIKQCSTPKLLESALAAMIKT 806

Query: 72   NIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSIAYF 131
            ++    R++ QFI++C+S   +D AV    + +  N F++NAL +G    S    S+  +
Sbjct: 807  SLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELY 866

Query: 132  VCMLRWEISPDRLTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFDSFVRVSLVDMYVKV 191
            V MLR  +SP   T+  ++K+++  S    G +L + I KFG  F   ++ +L+D Y   
Sbjct: 867  VRMLRDSVSPSSYTYSSLVKASSFASR--FGESLQAHIWKFGFGFHVKIQTTLIDFYSAT 926

Query: 192  DDLGSALKVFDESPDRIKKENVLIWNVLIHGYCRVGNLVKATELFETMPKKDTGSWNSLI 251
              +  A KVFDE P+R    + + W  ++  Y RV ++  A  L   M +K+  + N LI
Sbjct: 927  GRIREARKVFDEMPER----DDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLI 986

Query: 252  NGFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGARPNDY 311
            NG+M  G L  A  LF +MP K+++SWTTM+ G+SQN    +A+  F+ M+EEG  P++ 
Sbjct: 987  NGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEV 1046

Query: 312  TIVSALSACAKLGLM 325
            T+ + +SACA LG++
Sbjct: 1047 TMSTVISACAHLGVL 1048

BLAST of Cp4.1LG17g02740 vs. TAIR10
Match: AT5G37570.1 (AT5G37570.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 165.2 bits (417), Expect = 7.0e-41
Identity = 99/317 (31.23%), Postives = 168/317 (53.00%), Query Frame = 1

Query: 35  SSPQISSQETHFIDLIHASDSTHKLRQIHGQLYRCNIFSSSRVVTQFISSCSSLNS-VDY 94
           S P + S ET    L     S   L QIH ++ R  +     +++ FISS SS +S + Y
Sbjct: 6   SHPSLLSLET----LFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSY 65

Query: 95  AVLIFQRFELKNSFLFNALIRGLAENSRFESSIAYFVCMLRWEIS-PDRLTFPFVLKSAA 154
           +  +F+R     ++L+N LI+G +    F  +++  + M+R  ++ PD  TFP V+K  +
Sbjct: 66  SSSVFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCS 125

Query: 155 ALSNGGVGSALHSGIVKFGLEFDSFVRVSLVDMYVKVDDLGSALKVFDESPDR------- 214
                 VGS++H  +++ G + D  V  S VD Y K  DL SA KVF E P+R       
Sbjct: 126 NNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTA 185

Query: 215 --------------------IKKENVLIWNVLIHGYCRVGNLVKATELFETMPKKDTGSW 274
                               + + N+  WN L+ G  + G+LV A +LF+ MPK+D  S+
Sbjct: 186 LVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISY 245

Query: 275 NSLINGFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGAR 323
            S+I+G+ + G +  A +LFE+    +V +W+ ++ G++QNG P +A + F  M  +  +
Sbjct: 246 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 305

BLAST of Cp4.1LG17g02740 vs. TAIR10
Match: AT1G14470.1 (AT1G14470.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 160.6 bits (405), Expect = 1.7e-39
Identity = 98/264 (37.12%), Postives = 142/264 (53.79%), Query Frame = 1

Query: 58  KLRQIHGQLYRCNIFS-SSRVVTQFISSCSSLNSVDYAV-LIFQRFELKNSFLFNALIRG 117
           +L QIH QL   N     S   ++ IS C+ L +  Y   LIF      N F+ N++ + 
Sbjct: 21  QLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKY 80

Query: 118 LAENSRFESSIAYFVCMLRWEISPDRLTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFD 177
            ++       +  +    R  I PD  +FP V+KSA     G  G    + + K G   D
Sbjct: 81  FSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSA-----GRFGILFQALVEKLGFFKD 140

Query: 178 SFVRVSLVDMYVKVDDLGSALKVFDESPDRIKKENVLIWNVLIHGYCRVGNLVKATELFE 237
            +VR  ++DMYVK + + SA KVFD+   R   +    WNV+I GY + GN  +A +LF+
Sbjct: 141 PYVRNVIMDMYVKHESVESARKVFDQISQRKGSD----WNVMISGYWKWGNKEEACKLFD 200

Query: 238 TMPKKDTGSWNSLINGFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQF 297
            MP+ D  SW  +I GF +   L  A + F++MPEK+VVSW  M++G++QNG  E AL+ 
Sbjct: 201 MMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRL 260

Query: 298 FFCMLEEGARPNDYTIVSALSACA 320
           F  ML  G RPN+ T V  +SAC+
Sbjct: 261 FNDMLRLGVRPNETTWVIVISACS 275

BLAST of Cp4.1LG17g02740 vs. TAIR10
Match: AT5G15300.1 (AT5G15300.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-38
Identity = 89/266 (33.46%), Postives = 150/266 (56.39%), Query Frame = 1

Query: 59  LRQIHGQLYRCNIFSSSRVVTQFI--SSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGL 118
           L+QIH  +    + S+  VV + I  +S S   ++ YA  +F      +  + N ++RG 
Sbjct: 28  LKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGS 87

Query: 119 AENSRFESSIAYFVCMLRWEISPDRLTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFDS 178
           A++ + E +++ +  M +  +SPDR TF FVLK+ + L     G A H  +V+ G   + 
Sbjct: 88  AQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNE 147

Query: 179 FVRVSLVDMYVKVDDLGSALKVFDESPDRIKKENVLIWNVLIHGYCRVGNLVKATELFET 238
           +V+ +L+  +    DLG A ++FD+S     K + + W+ +  GY + G + +A  LF+ 
Sbjct: 148 YVKNALILFHANCGDLGIASELFDDSA----KAHKVAWSSMTSGYAKRGKIDEAMRLFDE 207

Query: 239 MPKKDTGSWNSLINGFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFF 298
           MP KD  +WN +I G ++  ++  A ELF++  EK+VV+W  M++G+   G P++AL  F
Sbjct: 208 MPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIF 267

Query: 299 FCMLEEGARPNDYTIVSALSACAKLG 323
             M + G  P+  TI+S LSACA LG
Sbjct: 268 KEMRDAGEHPDVVTILSLLSACAVLG 289

BLAST of Cp4.1LG17g02740 vs. NCBI nr
Match: gi|449442481|ref|XP_004139010.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g04840 [Cucumis sativus])

HSP 1 Score: 554.7 bits (1428), Expect = 1.2e-154
Identity = 274/323 (84.83%), Postives = 301/323 (93.19%), Query Frame = 1

Query: 2   LLLRLNGTGSNRMKNLHVLFKPRIAFFNSTSSSSSPQISSQETHFIDLIHASDSTHKLRQ 61
           +LLR NG+GSN MK+LHVLF PRIAFF+S  SSSSP IS  ETHFIDLIHAS+STHKLRQ
Sbjct: 1   MLLRRNGSGSNIMKDLHVLFNPRIAFFSSMFSSSSPPISFLETHFIDLIHASNSTHKLRQ 60

Query: 62  IHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSR 121
           IHGQLYRCN+FSSSRVVTQFISSCSSLNSVDYA+ IFQRFELKNS+LFNALIRGLAENSR
Sbjct: 61  IHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSR 120

Query: 122 FESSIAYFVCMLRWEISPDRLTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFDSFVRVS 181
           FESSI++FV ML+W+ISPDRLTFPFVLKSAAALSNGGVG ALH GI+KFGLEFDSFVRVS
Sbjct: 121 FESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVS 180

Query: 182 LVDMYVKVDDLGSALKVFDESPDRIKKENVLIWNVLIHGYCRVGNLVKATELFETMPKKD 241
           LVDMYVKV++LGSALKVFDESP+ +K  +VLIWNVLIHGYCR+G+LVKATELF++MPKKD
Sbjct: 181 LVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKD 240

Query: 242 TGSWNSLINGFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLE 301
           TGSWNSLINGFM+ G +G A ELF KMPEKNVVSWTTMVNGFSQNGDPEKAL+ FFCMLE
Sbjct: 241 TGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLE 300

Query: 302 EGARPNDYTIVSALSACAKLGLM 325
           EGARPNDYTIVSALSACAK+G +
Sbjct: 301 EGARPNDYTIVSALSACAKIGAL 323

BLAST of Cp4.1LG17g02740 vs. NCBI nr
Match: gi|659114785|ref|XP_008457226.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g04840 [Cucumis melo])

HSP 1 Score: 545.0 bits (1403), Expect = 9.2e-152
Identity = 271/323 (83.90%), Postives = 298/323 (92.26%), Query Frame = 1

Query: 2   LLLRLNGTGSNRMKNLHVLFKPRIAFFNSTSSSSSPQISSQETHFIDLIHASDSTHKLRQ 61
           +LL  NGTGSN MK+LHVLF PRIAF +S  SSSS +ISS ETHFIDLIHAS+STHKLRQ
Sbjct: 1   MLLPRNGTGSNIMKDLHVLFNPRIAFLSSMFSSSSLRISSLETHFIDLIHASNSTHKLRQ 60

Query: 62  IHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSR 121
           IHGQLYRCN+FSSSRVVTQFISSCS LN+VDYAV IFQRFELKNS+LFNALIRGLAENSR
Sbjct: 61  IHGQLYRCNVFSSSRVVTQFISSCSLLNAVDYAVSIFQRFELKNSYLFNALIRGLAENSR 120

Query: 122 FESSIAYFVCMLRWEISPDRLTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFDSFVRVS 181
           FESSI++FV ML+W+ISPDRLTFPFVLKSAAALSNGGVG ALH GI+KFGL FDSFVRVS
Sbjct: 121 FESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLVFDSFVRVS 180

Query: 182 LVDMYVKVDDLGSALKVFDESPDRIKKENVLIWNVLIHGYCRVGNLVKATELFETMPKKD 241
           LVDMYVKV +LGSALKVFDESP+ +K  +VLIWNVLIHGYCR+G+LVKATELF++MPKKD
Sbjct: 181 LVDMYVKVGELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKD 240

Query: 242 TGSWNSLINGFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLE 301
           TGSWNSLINGFM+ G +G A ELFEKMPEKNVVSWTTMVNGFSQNGDP+KAL+ FFCMLE
Sbjct: 241 TGSWNSLINGFMKMGDMGRAKELFEKMPEKNVVSWTTMVNGFSQNGDPQKALETFFCMLE 300

Query: 302 EGARPNDYTIVSALSACAKLGLM 325
           EGARPNDYTIVSALSACAK+G +
Sbjct: 301 EGARPNDYTIVSALSACAKIGAL 323

BLAST of Cp4.1LG17g02740 vs. NCBI nr
Match: gi|359477907|ref|XP_002270439.2| (PREDICTED: pentatricopeptide repeat-containing protein At1g04840 [Vitis vinifera])

HSP 1 Score: 384.4 bits (986), Expect = 2.1e-103
Identity = 197/319 (61.76%), Postives = 242/319 (75.86%), Query Frame = 1

Query: 11  SNRMKNLHVLFKP-----RIAFFNSTSSSSSPQISSQETHFIDLIHASDSTHKLRQIHGQ 70
           S  +K L+ LFKP     +     +T+ +  P   S ETHFI LIHAS++  +L QIH Q
Sbjct: 4   SQGLKALNALFKPTSPPAKTTTVTTTTRAHGPS-RSPETHFIPLIHASNTLPQLHQIHAQ 63

Query: 71  LYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESS 130
           ++  N+FS+SRVVTQ ISS  SL S+DYA+ IF+ F+  N F+FNALIRGLAENSRFE S
Sbjct: 64  IFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGS 123

Query: 131 IAYFVCMLRWEISPDRLTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFDSFVRVSLVDM 190
           +++FV MLR  I PDRLT PFVLKS AAL + G+G  LH G++K GLEFDSFVRVSLVDM
Sbjct: 124 VSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDM 183

Query: 191 YVKVDDLGSALKVFDESPDRIKKENVLIWNVLIHGYCRVGNLVKATELFETMPKKDTGSW 250
           YVK+ +LG  L++FDESP R K E++L+WNVLI+G C+VG+L KA  LFE MP+++ GSW
Sbjct: 184 YVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSW 243

Query: 251 NSLINGFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGAR 310
           NSLINGF+R G L  A ELF +MPEKNVVSWTTM+NGFSQNGD EKAL  F+ MLEEG R
Sbjct: 244 NSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVR 303

Query: 311 PNDYTIVSALSACAKLGLM 325
           PND T+VSAL AC K+G +
Sbjct: 304 PNDLTVVSALLACTKIGAL 321

BLAST of Cp4.1LG17g02740 vs. NCBI nr
Match: gi|802588866|ref|XP_012071119.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g04840 [Jatropha curcas])

HSP 1 Score: 364.8 bits (935), Expect = 1.7e-97
Identity = 186/318 (58.49%), Postives = 237/318 (74.53%), Query Frame = 1

Query: 14  MKNLHVLFKPRIAFFNSTSS---SSSPQIS----SQETHFIDLIHASDSTHKLRQIHGQL 73
           M++ H LFK + +   +TSS   +SSP  +      ETH I LIHAS ++ +L QIH Q+
Sbjct: 1   MRSRHALFKAKNSPAKTTSSREPTSSPNKALSQNPSETHLISLIHASKTSRQLHQIHAQI 60

Query: 74  YRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSI 133
           +  N+ +SS++ TQ ISS SS   +DYA+ +F  +  KNSFLFNALIRGL  NS FES+I
Sbjct: 61  FLHNLSTSSQIATQLISSSSSRKFIDYAITVFNHYYPKNSFLFNALIRGLTNNSLFESAI 120

Query: 134 AYFVCMLRWEISPDRLTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFDSFVRVSLVDMY 193
           ++F+ MLR ++ PD+LT+PFVLKS A L + G+G ALH  I K G EFD FVR+S+VD Y
Sbjct: 121 SHFILMLRSDVKPDQLTYPFVLKSIATLCSEGLGRALHGMIYKSGFEFDLFVRISMVDAY 180

Query: 194 VKVDDLGSALKVFDESPDRIKKENVLIWNVLIHGYCRVGNLVKATELFETMPKKDTGSWN 253
           VKV++LGSALK+FDESP R   E+ L+WNVLI+G C+VG++ KA +LFETMP++ T SWN
Sbjct: 181 VKVEELGSALKLFDESPQRFYGESTLLWNVLINGCCKVGSMRKAVDLFETMPERTTASWN 240

Query: 254 SLINGFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGARP 313
           SLINGF+R G L  ANELF +MPEKNVVSWTTMVNG S NGD EKAL  F  ML+ G +P
Sbjct: 241 SLINGFLRSGDLERANELFGRMPEKNVVSWTTMVNGLSHNGDHEKALSLFSKMLQVGVKP 300

Query: 314 NDYTIVSALSACAKLGLM 325
           ND+TIVSALSACAK+G +
Sbjct: 301 NDFTIVSALSACAKIGAL 318

BLAST of Cp4.1LG17g02740 vs. NCBI nr
Match: gi|590656604|ref|XP_007034318.1| (Tetratricopeptide repeat-like superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 349.0 bits (894), Expect = 9.7e-93
Identity = 180/303 (59.41%), Postives = 226/303 (74.59%), Query Frame = 1

Query: 22  KPRIAFFNSTSSSSSPQISSQETHFIDLIHASDSTHKLRQIHGQLYRCNIFSSSRVVTQF 81
           KP I+  +S+SSS  P     +THF  LI +S +T +LRQIH Q++R N+ SSS + T  
Sbjct: 28  KPPISHGSSSSSSQDPL----KTHFASLIQSSKTTLQLRQIHAQIFRRNLSSSSNLTTLL 87

Query: 82  ISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSIAYFVCMLRWEISPDR 141
           IS+ SSL S+ YA+ +F  F  K+ FLFNALIRGL +NS  ESSI++F+ ML   + PD+
Sbjct: 88  ISASSSLKSIPYAISLFNHFHHKSIFLFNALIRGLTDNSLLESSISHFLLMLSLGVRPDK 147

Query: 142 LTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFDSFVRVSLVDMYVKVDDLGSALKVFDE 201
           LT+PFVLKS A L    +G  LH  I+K G+EFDSFVRV+LV+MYVK+ +LG AL+VFDE
Sbjct: 148 LTYPFVLKSIAGLGLRCLGLILHGRIIKSGVEFDSFVRVALVEMYVKLKELGFALQVFDE 207

Query: 202 SPDRIKKENVLIWNVLIHGYCRVGNLVKATELFETMPKKDTGSWNSLINGFMRKGQLGPA 261
           SP+R K  ++L+WNVLI+GYC+ GNL KA ELFE  P+++ GSWNSLINGFMR G L  A
Sbjct: 208 SPERNKSGSILLWNVLINGYCKDGNLGKAMELFEATPERNIGSWNSLINGFMRNGDLDKA 267

Query: 262 NELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGARPNDYTIVSALSACAKL 321
            ELF++M EK+VVSWTTMVNGFSQNGD EKAL  FF MLE   RPND T+V ALSACAK+
Sbjct: 268 VELFDEMKEKDVVSWTTMVNGFSQNGDHEKALSMFFKMLEAALRPNDLTLVPALSACAKI 326

Query: 322 GLM 325
           G +
Sbjct: 328 GAL 326

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PPR10_ARATH3.6e-8753.18Pentatricopeptide repeat-containing protein At1g04840 OS=Arabidopsis thaliana GN... [more]
PPR15_ARATH5.6e-4031.43Pentatricopeptide repeat-containing protein At1g06145 OS=Arabidopsis thaliana GN... [more]
PP403_ARATH1.2e-3931.23Putative pentatricopeptide repeat-containing protein At5g37570 OS=Arabidopsis th... [more]
PPR43_ARATH3.1e-3837.12Pentatricopeptide repeat-containing protein At1g14470 OS=Arabidopsis thaliana GN... [more]
PP385_ARATH2.0e-3733.46Pentatricopeptide repeat-containing protein At5g15300 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0LI86_CUCSA8.1e-15584.83Uncharacterized protein OS=Cucumis sativus GN=Csa_2G139850 PE=4 SV=1[more]
F6GWJ6_VITVI1.5e-10361.76Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0029g01130 PE=4 SV=... [more]
A0A067KWK1_JATCU1.2e-9758.49Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01110 PE=4 SV=1[more]
A0A061EK73_THECC6.8e-9359.41Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao G... [more]
A0A0D2PM74_GOSRA1.7e-9157.76Uncharacterized protein OS=Gossypium raimondii GN=B456_005G031300 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G04840.12.0e-8853.18 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G06150.13.1e-4131.43 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G37570.17.0e-4131.23 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT1G14470.11.7e-3937.12 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G15300.11.1e-3833.46 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449442481|ref|XP_004139010.1|1.2e-15484.83PREDICTED: pentatricopeptide repeat-containing protein At1g04840 [Cucumis sativu... [more]
gi|659114785|ref|XP_008457226.1|9.2e-15283.90PREDICTED: pentatricopeptide repeat-containing protein At1g04840 [Cucumis melo][more]
gi|359477907|ref|XP_002270439.2|2.1e-10361.76PREDICTED: pentatricopeptide repeat-containing protein At1g04840 [Vitis vinifera... [more]
gi|802588866|ref|XP_012071119.1|1.7e-9758.49PREDICTED: pentatricopeptide repeat-containing protein At1g04840 [Jatropha curca... [more]
gi|590656604|ref|XP_007034318.1|9.7e-9359.41Tetratricopeptide repeat-like superfamily protein isoform 1 [Theobroma cacao][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g02740.1Cp4.1LG17g02740.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 108..135
score: 0
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 210..237
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 271..320
score: 2.5
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 213..240
score: 2.3E-6coord: 274..307
score: 7.5E-7coord: 108..140
score: 0.002coord: 244..274
score: 7.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 105..139
score: 9.449coord: 175..205
score: 6.281coord: 245..271
score: 7.037coord: 210..244
score: 10.896coord: 272..306
score: 1
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 157..314
score: 1.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 29..322
score: 1.2E
NoneNo IPR availablePANTHERPTHR24015:SF790SUBFAMILY NOT NAMEDcoord: 29..322
score: 1.2E

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG17g02740CmaCh08G009610Cucurbita maxima (Rimu)cmacpeB916
Cp4.1LG17g02740CmoCh08G009320Cucurbita moschata (Rifu)cmocpeB853
Cp4.1LG17g02740Carg11081Silver-seed gourdcarcpeB1503
The following gene(s) are paralogous to this gene:

None