Cp4.1LG17g02390 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG17g02390
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Receptor protein kinase-like protein
Location	Cp4.1LG17 : 2362827 .. 2366178 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGTTTATTGGTAAAATATTTATGTTTAGACAATTTTAAAGTGGGAGATTCGAGCTATTCACCATTGCAATTTGAATATAATTAAAATTAATTGTGTAGTTTAAGAGAGACAGATAACTAAGCATTGATATATGCAATAATGCAAGAGAATGGTCCGGATCTCTCTAACAAAATGGGTCCAAAAAAATAAAAAAATAAATGTGTTTTACTAAGTCATGACCTGAAGGTTTGCTCCCAAAGATAGAGACATTACATTGGAAGACAATGAATATCCAAACTTACACATGTTGACTTAGTAAAACACATTTATTTTCAATTTTTTTAGAACAATTTATTAGAAAAGTAGTCTATTCATTTCTCTTAAATTGCAAACTTTAATATTCAAATCTTATTTATGAATAGATCAATATTTAACCTTAAGACTACAGTTCATCAAGAAAGCTCCGATTTTTATTTAACTCAAAATTAAAGATTTTTTTTTTCCTAATCTAATATTTCATATTAATAGTAAATATTTCCTAATTTTCTATCTTGTCTTACAAGCATTCTCTCTTCAAGCCACATCGGGCTATTTAATTGAAAAACAACAATTCAACTATAAATCTACTTTCAAGTCATTAAATATTTGAAAGAAAATTCGACCCAAACCTCACGTCTAATTTATATAATACAAAAATCAAAACCAATAAAAAAAATAATAATGCTAAGGATATGTTTTTGAGATTAGCAGTTTCTGTCTCTTCGTATGATTGGGTTAAACTCGTTTAAAATGGCATTTCCACTAAATCAATACTCATGGCAATTTCTCTTTATCTTCTTGTTCTCATTCTCGTTTTCGATGATGATGATGAGAGACTAACAAAAGCGACTAACTAGGAGATCTAGAGAACTTCAAATATTTCAAGGACCGGAGGTACAACCAAGAACTAAGAAAGTAGAATCAGAAAACCTAGGATTTAGCCTAAGAAGAGACTATACGGGAGAAGGAATCCCCAAAAGAGAATAAAATATTGAATGTATGAACAACTAGCAAGACTTAATAACAAAATATAAACTACCAGCAAGCTACTTACTAAGTATATTTTATATACTCATTTCTACTCCTTCAACTTTCTTTTCAGGTGGAGTTTGACGTAGCAGTCGACGTGGAGGCACACGTGGGTTGTTGGCTATAGAAAGTACCATCACATTTCAGTCTAGAGTTCCTTTATACTTACATTTAAATACTATATTTCATGTATTTTAAATGGTCGATCTTGTAGGGGTGCATTTAGTGGTCTTTTCTTGTTTTTTTATAAAAGTAAAAGTTTTCATTATTATTTTAATCAAATTTCAAAGTGCATGCACGTTTTTAAATGTTATAAATTTCACACATTTTTTTTCTTATTTCTACGTCAGTGAGTAACAGTTCATAACTCGAGTCCCTAAAAAAGTGGGTCGTTACAGATATGCTTTTATATGCCAGTTATGTTATGTTATGCTATATGATACACCAAATTATGTTATGGTATAAATGAAATGCTATGGTATGTAGCAATAATATGCTAAAATATGCTATGACATCATACTATGATATGTCATGATATGTTTTGAAATAAGGAAATCTACGGTGCAAGCCTCTCTATGTCATGTCATGAAGGCTATGCTATGTATGAAATAATTTATAAGAATTATGAAGGTATAATTATCGAATTTAACATGTCATGAAAGAATGGAGATTTGCCTTACATCATTTATTATGCCTTGATGGAAAGTATGGGGACCTTATGCATAATTATGTGTTCACGTGTATCAAGATACTTCCCCATCATGATGAGTACTAACGCGTACATTATGAGAAAGATTATAATGTTTATGTTCGCTATAATTATACGACGTCCACTATTCCCTCGGGGTGTCTGGCAACAGCCCGCAAGCAAGTGCTAGCCTGACCAACAAGTTCAGGGAGTGTGCAAACTCGTCTGGTGGGTCCATGTTCGCATGTATGGATCATGTATAAAGAAGTACTACACATCCAATACAAATATGTTAAAACCAATAATATTCATGGACGTTGAATCTCTATATCTTGTCCAACATATTCTCTCACTTTTACATTCGGTAAGTCTCGTTAGAAAAAGACCAAATTAATTAAAGAATGGGTTAAGTGTTATTTCGAAACGGTTAAAATGATATTTGTGGTGTTTAAAATCAATCTCTCTAAATAATTTTAATGTTTTCATCTTACATCCTTATTGTAAGATGAATAATTTTAAGTTATTATTCATCTTATATTCTTTTTACATTTTTCTTTGCTATTTATTAAACCTTATTTTACCGACACTTGATATTATAGAAAAACATATACATTTTAGTCTGATATATGTCTCAATTTATGTCATAAATGAATTTTTTTTTTTTCTTCAAGGACAATGTTTGAATTTTAAACATAAAAAAATAATTATTTTAAAAATAAATAATAAAAAAAAAGCTAACAAATTATCTTATTCGATACAAACATGTTCAAACCAATAATATTGGTGAATACTGAAATACTCATATCTTGTCGAACACGTTCTCTCACTTTTAATATCTAATTAAAAAAAGACCAAATCATTTTAAGAATAGATTAAGTATTATTTCAAAATGAATAAAAACATATTATTTTAAAATGGTTAAAGAAAGTCTATTTTCCTTACCAATTTAGTGAGATGTCATTAGATTATTTATTTTTATTTATTTCTTGAAAATGGTTTAAGAAATCATTAATTTCAATAGATAAATAAATCGTTAGAATTTCTGAACATCTAGAATTTTTTTTATTTGGTGGCATCAATTATCTTTCACCTTAGCATCTGTTTTATTGGTTAAATATTTGGGTTGGTACAATTTTAAAGTGGGAGATCAAGCTTTTCTATCTGATTTTGGTATCTCGAGATTACTTGAGATTACTTCATCTTGAATCATCCTATCATACCACTATTGGTAGCATTTGTGGATATATATCTCCCGGTGAGCCCATATTAGAGTAATGATCAATGAATTGTTATTTTATTTCTTAAAATCATTACTTTTAATTCTTGTTCTTTTCTAATTCAGAATTAGCATACACCATGGTCATAACAGAAAAATGTGACGTCTACACCTTTAGAGTTGTGGCATTAGAAGTAATAATGGGAAAGCATCCTGTAGAACTAACTTACTTGTGGTTTAAGTCTACTCCACGTATACTCATCAATGATTTGTTAGACTCACGACTCAAATATCCTTTACTCCAAATTGGATTGGCACAAAGTATACTTCTCACATTAACATTGGCCTTTGCATCTGTCATTCCAAATCCAAAAGCCCGGCCTACGATGCAATAA

mRNA sequence

ATGTCTGAATTAGCATACACCATGGTCATAACAGAAAAATGTGACGTCTACACCTTTAGAGTTGTGGCATTAGAAGTAATAATGGGAAAGCATCCTGTAGAACTAACTTACTTGTGGTTTAAGTCTACTCCACGTATACTCATCAATGATTTGTTAGACTCACGACTCAAATATCCTTTACTCCAAATTGGATTGGCACAAAGTATACTTCTCACATTAACATTGGCCTTTGCATCTGTCATTCCAAATCCAAAAGCCCGGCCTACGATGCAATAA

Coding sequence (CDS)

ATGTCTGAATTAGCATACACCATGGTCATAACAGAAAAATGTGACGTCTACACCTTTAGAGTTGTGGCATTAGAAGTAATAATGGGAAAGCATCCTGTAGAACTAACTTACTTGTGGTTTAAGTCTACTCCACGTATACTCATCAATGATTTGTTAGACTCACGACTCAAATATCCTTTACTCCAAATTGGATTGGCACAAAGTATACTTCTCACATTAACATTGGCCTTTGCATCTGTCATTCCAAATCCAAAAGCCCGGCCTACGATGCAATAA

Protein sequence

MSELAYTMVITEKCDVYTFRVVALEVIMGKHPVELTYLWFKSTPRILINDLLDSRLKYPLLQIGLAQSILLTLTLAFASVIPNPKARPTMQ

Homology

[Close]

BLAST of Cp4.1LG17g02390 vs. Swiss-Prot
Match: MIK2_ARATH (MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana GN=MIK2 PE=1 SV=3)

HSP 1 Score: 62.0 bits (149), Expect = 3.9e-09
Identity = 38/90 (42.22%), Postives = 53/90 (58.89%), Query Frame = 1


Query: 3    ELAYTMVITEKCDVYTFRVVALEVIMGKHPVELTYLWFKSTP--RILINDLLDSRLKYPL 62
            ELAY M +TEKCDVY+F V+ LEVI G+HP +L      S P   + +  + D RL  P 
Sbjct: 950  ELAYAMKVTEKCDVYSFGVLTLEVIKGEHPGDLVSTLSSSPPDATLSLKSISDHRLPEPT 1009

Query: 63   LQIGLAQSILLTLTLAFASVIPNPKARPTM 91
             +I   + +L  L +A   +  +P+ARPTM
Sbjct: 1010 PEI--KEEVLEILKVALLCLHSDPQARPTM 1037

[Close]

BLAST of Cp4.1LG17g02390 vs. Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 7.3e-08
Identity = 36/89 (40.45%), Postives = 52/89 (58.43%), Query Frame = 1


Query: 3    ELAYTMVITEKCDVYTFRVVALEVIMGKHPVELTYLWFKSTPRIL-INDLLDSRLKYPLL 62
            E AYTM +TEKCDVY+F V+ LE+I+GKHP +L      S    L +  + D R+  P  
Sbjct: 1026 EFAYTMKVTEKCDVYSFGVLILELIIGKHPGDLVSSLSSSPGEALSLRSISDERVLEPRG 1085

Query: 63   QIGLAQSILLTLTLAFASVIPNPKARPTM 91
            Q    + +L  + +A   +  NP++RPTM
Sbjct: 1086 Q--NREKLLKMVEMALLCLQANPESRPTM 1112

[Close]

BLAST of Cp4.1LG17g02390 vs. TrEMBL
Match: V4W0H9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017805mg PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.7e-16
Identity = 52/90 (57.78%), Postives = 67/90 (74.44%), Query Frame = 1


Query: 3   ELAYTMVITEKCDVYTFRVVALEVIMGKHPVE-LTYLWFKSTPRILINDLLDSRLKYPLL 62
           ELAYTMV+TEKCDVY+F VV LEV+MGKHP + L+ L   S P+I++ D+LD RL  P+ 
Sbjct: 526 ELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDLLSSLSSSSDPKIMLIDVLDQRLPPPVD 585

Query: 63  QIGLAQSILLTLTLAFASVIPNPKARPTMQ 92
           Q  + Q ILL  T++FA +  NPK+RPTMQ
Sbjct: 586 Q-KVIQDILLASTISFACLQSNPKSRPTMQ 614

[Close]

BLAST of Cp4.1LG17g02390 vs. TrEMBL
Match: A0A067FMY9_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g040414mg PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.7e-16
Identity = 52/90 (57.78%), Postives = 67/90 (74.44%), Query Frame = 1


Query: 3   ELAYTMVITEKCDVYTFRVVALEVIMGKHPVE-LTYLWFKSTPRILINDLLDSRLKYPLL 62
           ELAYTMV+TEKCDVY+F VV LEV+MGKHP + L+ L   S P+I++ D+LD RL  P+ 
Sbjct: 42  ELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDLLSSLSSSSDPKIMLIDVLDQRLPPPVD 101

Query: 63  QIGLAQSILLTLTLAFASVIPNPKARPTMQ 92
           Q  + Q ILL  T++FA +  NPK+RPTMQ
Sbjct: 102 Q-KVIQDILLASTISFACLQSNPKSRPTMQ 130

[Close]

BLAST of Cp4.1LG17g02390 vs. TrEMBL
Match: A0A067F5C2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013793mg PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.7e-16
Identity = 52/90 (57.78%), Postives = 67/90 (74.44%), Query Frame = 1


Query: 3   ELAYTMVITEKCDVYTFRVVALEVIMGKHPVE-LTYLWFKSTPRILINDLLDSRLKYPLL 62
           ELAYTMV+TEKCDVY+F VV LEV+MGKHP + L+ L   S P+I++ D+LD RL  P+ 
Sbjct: 318 ELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDLLSSLSSSSDPKIMLIDVLDQRLPPPVD 377

Query: 63  QIGLAQSILLTLTLAFASVIPNPKARPTMQ 92
           Q  + Q ILL  T++FA +  NPK+RPTMQ
Sbjct: 378 Q-KVIQDILLASTISFACLQSNPKSRPTMQ 406

[Close]

BLAST of Cp4.1LG17g02390 vs. TrEMBL
Match: A0A0D2SLR2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_N0105002 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.7e-16
Identity = 51/93 (54.84%), Postives = 69/93 (74.19%), Query Frame = 1


Query: 3   ELAYTMVITEKCDVYTFRVVALEVIMGKHPVELTYLWFKSTPRILIN----DLLDSRLKY 62
           ELAYTM++TEKCDVY+F VVALE++MGKHP EL  L + S+P  L+N    D+LD+RL  
Sbjct: 77  ELAYTMIVTEKCDVYSFGVVALEIVMGKHPEEL--LSWLSSPTSLVNMKLVDVLDNRLPL 136

Query: 63  PLLQIGLAQSILLTLTLAFASVIPNPKARPTMQ 92
           P  Q+ + Q+++   TLAFA + P PK+RPTM+
Sbjct: 137 PTSQL-VTQNLVHVATLAFACLNPQPKSRPTMK 166

[Close]

BLAST of Cp4.1LG17g02390 vs. TrEMBL
Match: A0A0D2VJT5_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_N0105002 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.7e-16
Identity = 51/93 (54.84%), Postives = 69/93 (74.19%), Query Frame = 1


Query: 3   ELAYTMVITEKCDVYTFRVVALEVIMGKHPVELTYLWFKSTPRILIN----DLLDSRLKY 62
           ELAYTM++TEKCDVY+F VVALE++MGKHP EL  L + S+P  L+N    D+LD+RL  
Sbjct: 84  ELAYTMIVTEKCDVYSFGVVALEIVMGKHPEEL--LSWLSSPTSLVNMKLVDVLDNRLPL 143

Query: 63  PLLQIGLAQSILLTLTLAFASVIPNPKARPTMQ 92
           P  Q+ + Q+++   TLAFA + P PK+RPTM+
Sbjct: 144 PTSQL-VTQNLVHVATLAFACLNPQPKSRPTMK 173

[Close]

BLAST of Cp4.1LG17g02390 vs. TAIR10
Match: AT4G08850.1 (AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein)

HSP 1 Score: 62.0 bits (149), Expect = 2.2e-10
Identity = 38/90 (42.22%), Postives = 53/90 (58.89%), Query Frame = 1


Query: 3    ELAYTMVITEKCDVYTFRVVALEVIMGKHPVELTYLWFKSTP--RILINDLLDSRLKYPL 62
            ELAY M +TEKCDVY+F V+ LEVI G+HP +L      S P   + +  + D RL  P 
Sbjct: 950  ELAYAMKVTEKCDVYSFGVLTLEVIKGEHPGDLVSTLSSSPPDATLSLKSISDHRLPEPT 1009

Query: 63   LQIGLAQSILLTLTLAFASVIPNPKARPTM 91
             +I   + +L  L +A   +  +P+ARPTM
Sbjct: 1010 PEI--KEEVLEILKVALLCLHSDPQARPTM 1037

[Close]

BLAST of Cp4.1LG17g02390 vs. TAIR10
Match: AT1G35710.1 (AT1G35710.1 Protein kinase family protein with leucine-rich repeat domain)

HSP 1 Score: 57.8 bits (138), Expect = 4.1e-09
Identity = 36/89 (40.45%), Postives = 52/89 (58.43%), Query Frame = 1


Query: 3    ELAYTMVITEKCDVYTFRVVALEVIMGKHPVELTYLWFKSTPRIL-INDLLDSRLKYPLL 62
            E AYTM +TEKCDVY+F V+ LE+I+GKHP +L      S    L +  + D R+  P  
Sbjct: 1026 EFAYTMKVTEKCDVYSFGVLILELIIGKHPGDLVSSLSSSPGEALSLRSISDERVLEPRG 1085

Query: 63   QIGLAQSILLTLTLAFASVIPNPKARPTM 91
            Q    + +L  + +A   +  NP++RPTM
Sbjct: 1086 Q--NREKLLKMVEMALLCLQANPESRPTM 1112

[Close]

BLAST of Cp4.1LG17g02390 vs. TAIR10
Match: AT1G17230.1 (AT1G17230.1 Leucine-rich receptor-like protein kinase family protein)

HSP 1 Score: 49.7 bits (117), Expect = 1.1e-06
Identity = 36/97 (37.11%), Postives = 54/97 (55.67%), Query Frame = 1


Query: 3    ELAYTMVITEKCDVYTFRVVALEVIMGKHPVEL------TYLWFKSTPRILIN--DLLDS 62
            E AYTM +TEKCD+Y+F VV LE+I GK PV+          W + + R +I   ++ D+
Sbjct: 972  EYAYTMKVTEKCDIYSFGVVLLELITGKPPVQPLEQGGDLVNWVRRSIRNMIPTIEMFDA 1031

Query: 63   RLKYPLLQIGLAQSILLTLTLAFASVIPNPKARPTMQ 92
            RL     +     S++L + L   S   +P +RPTM+
Sbjct: 1032 RLDTNDKRTVHEMSLVLKIALFCTS--NSPASRPTMR 1066

[Close]

BLAST of Cp4.1LG17g02390 vs. TAIR10
Match: AT5G63930.1 (AT5G63930.1 Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 46.6 bits (109), Expect = 9.5e-06
Identity = 35/97 (36.08%), Postives = 52/97 (53.61%), Query Frame = 1


Query: 3    ELAYTMVITEKCDVYTFRVVALEVIMGKHPVEL------TYLWFKSTPR--ILINDLLDS 62
            E AYTM +TEK D+Y++ VV LE++ GK PV+          W +S  R   L + +LD+
Sbjct: 978  EYAYTMKVTEKSDIYSYGVVLLELLTGKAPVQPIDQGGDVVNWVRSYIRRDALSSGVLDA 1037

Query: 63   RLKYPLLQIGLAQSILLTLTLAFASVIPNPKARPTMQ 92
            RL   L    +   +L  L +A      +P ARP+M+
Sbjct: 1038 RL--TLEDERIVSHMLTVLKIALLCTSVSPVARPSMR 1072

[Close]

BLAST of Cp4.1LG17g02390 vs. NCBI nr
Match: gi|985437407|ref|XP_015383312.1| (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Citrus sinensis])

HSP 1 Score: 91.3 bits (225), Expect = 9.5e-16
Identity = 52/90 (57.78%), Postives = 67/90 (74.44%), Query Frame = 1


Query: 3   ELAYTMVITEKCDVYTFRVVALEVIMGKHPVE-LTYLWFKSTPRILINDLLDSRLKYPLL 62
           ELAYTMV+TEKCDVY+F VV LEV+MGKHP + L+ L   S P+I++ D+LD RL  P+ 
Sbjct: 520 ELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDLLSSLSSSSDPKIMLIDVLDQRLPPPVD 579

Query: 63  QIGLAQSILLTLTLAFASVIPNPKARPTMQ 92
           Q  + Q ILL  T++FA +  NPK+RPTMQ
Sbjct: 580 Q-KVIQDILLASTISFACLQSNPKSRPTMQ 608

[Close]

BLAST of Cp4.1LG17g02390 vs. NCBI nr
Match: gi|641845907|gb|KDO64792.1| (hypothetical protein CISIN_1g040414mg, partial [Citrus sinensis])

HSP 1 Score: 91.3 bits (225), Expect = 9.5e-16
Identity = 52/90 (57.78%), Postives = 67/90 (74.44%), Query Frame = 1


Query: 3   ELAYTMVITEKCDVYTFRVVALEVIMGKHPVE-LTYLWFKSTPRILINDLLDSRLKYPLL 62
           ELAYTMV+TEKCDVY+F VV LEV+MGKHP + L+ L   S P+I++ D+LD RL  P+ 
Sbjct: 42  ELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDLLSSLSSSSDPKIMLIDVLDQRLPPPVD 101

Query: 63  QIGLAQSILLTLTLAFASVIPNPKARPTMQ 92
           Q  + Q ILL  T++FA +  NPK+RPTMQ
Sbjct: 102 Q-KVIQDILLASTISFACLQSNPKSRPTMQ 130

[Close]

BLAST of Cp4.1LG17g02390 vs. NCBI nr
Match: gi|823266959|ref|XP_012466157.1| (PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Gossypium raimondii])

HSP 1 Score: 91.3 bits (225), Expect = 9.5e-16
Identity = 51/93 (54.84%), Postives = 69/93 (74.19%), Query Frame = 1


Query: 3   ELAYTMVITEKCDVYTFRVVALEVIMGKHPVELTYLWFKSTPRILIN----DLLDSRLKY 62
           ELAYTM++TEKCDVY+F VVALE++MGKHP EL  L + S+P  L+N    D+LD+RL  
Sbjct: 778 ELAYTMIVTEKCDVYSFGVVALEIVMGKHPEEL--LSWLSSPTSLVNMKLVDVLDNRLPL 837

Query: 63  PLLQIGLAQSILLTLTLAFASVIPNPKARPTMQ 92
           P  Q+ + Q+++   TLAFA + P PK+RPTM+
Sbjct: 838 PTSQL-VTQNLVHVATLAFACLNPQPKSRPTMK 867

[Close]

BLAST of Cp4.1LG17g02390 vs. NCBI nr
Match: gi|567907541|ref|XP_006446084.1| (hypothetical protein CICLE_v10017805mg [Citrus clementina])

HSP 1 Score: 91.3 bits (225), Expect = 9.5e-16
Identity = 52/90 (57.78%), Postives = 67/90 (74.44%), Query Frame = 1


Query: 3   ELAYTMVITEKCDVYTFRVVALEVIMGKHPVE-LTYLWFKSTPRILINDLLDSRLKYPLL 62
           ELAYTMV+TEKCDVY+F VV LEV+MGKHP + L+ L   S P+I++ D+LD RL  P+ 
Sbjct: 526 ELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDLLSSLSSSSDPKIMLIDVLDQRLPPPVD 585

Query: 63  QIGLAQSILLTLTLAFASVIPNPKARPTMQ 92
           Q  + Q ILL  T++FA +  NPK+RPTMQ
Sbjct: 586 Q-KVIQDILLASTISFACLQSNPKSRPTMQ 614

[Close]

BLAST of Cp4.1LG17g02390 vs. NCBI nr
Match: gi|763817367|gb|KJB84207.1| (hypothetical protein B456_N0105002 [Gossypium raimondii])

HSP 1 Score: 91.3 bits (225), Expect = 9.5e-16
Identity = 51/93 (54.84%), Postives = 69/93 (74.19%), Query Frame = 1


Query: 3   ELAYTMVITEKCDVYTFRVVALEVIMGKHPVELTYLWFKSTPRILIN----DLLDSRLKY 62
           ELAYTM++TEKCDVY+F VVALE++MGKHP EL  L + S+P  L+N    D+LD+RL  
Sbjct: 77  ELAYTMIVTEKCDVYSFGVVALEIVMGKHPEEL--LSWLSSPTSLVNMKLVDVLDNRLPL 136

Query: 63  PLLQIGLAQSILLTLTLAFASVIPNPKARPTMQ 92
           P  Q+ + Q+++   TLAFA + P PK+RPTM+
Sbjct: 137 PTSQL-VTQNLVHVATLAFACLNPQPKSRPTMK 166

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g02390 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MIK2_ARATH	3.9e-09	42.22	MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana GN=MIK2 PE=1 SV...	[more]
Y1571_ARATH	7.3e-08	40.45	Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidops...	[more]

BLAST of Cp4.1LG17g02390 vs. TrEMBL


Match Name	E-value	Identity	Description
V4W0H9_9ROSI	6.7e-16	57.78	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017805mg PE=4 SV=1	[more]
A0A067FMY9_CITSI	6.7e-16	57.78	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g040414mg PE=4 S...	[more]
A0A067F5C2_CITSI	6.7e-16	57.78	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013793mg PE=4 SV=1	[more]
A0A0D2SLR2_GOSRA	6.7e-16	54.84	Uncharacterized protein OS=Gossypium raimondii GN=B456_N0105002 PE=4 SV=1	[more]
A0A0D2VJT5_GOSRA	6.7e-16	54.84	Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_N0105002 PE=4 ...	[more]

BLAST of Cp4.1LG17g02390 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G08850.1	2.2e-10	42.22	Leucine-rich repeat receptor-like protein kinase family protein	[more]
AT1G35710.1	4.1e-09	40.45	Protein kinase family protein with leucine-rich repeat domain	[more]
AT1G17230.1	1.1e-06	37.11	Leucine-rich receptor-like protein kinase family protein	[more]
AT5G63930.1	9.5e-06	36.08	Leucine-rich repeat protein kinase family protein	[more]

BLAST of Cp4.1LG17g02390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|985437407\|ref\|XP_015383312.1\|	9.5e-16	57.78	PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 ...	[more]
gi\|641845907\|gb\|KDO64792.1\|	9.5e-16	57.78	hypothetical protein CISIN_1g040414mg, partial [Citrus sinensis]	[more]
gi\|823266959\|ref\|XP_012466157.1\|	9.5e-16	54.84	PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [...	[more]
gi\|567907541\|ref\|XP_006446084.1\|	9.5e-16	57.78	hypothetical protein CICLE_v10017805mg [Citrus clementina]	[more]
gi\|763817367\|gb\|KJB84207.1\|	9.5e-16	54.84	hypothetical protein B456_N0105002 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011009	Kinase-like_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g02390.1	Cp4.1LG17g02390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011009	Protein kinase-like domain	unknown	SSF56112	Protein kinase-like (PK-like)	coord: 3..90 score: 2.3
None	No IPR available	PANTHER	PTHR27000	FAMILY NOT NAMED	coord: 3..91 score: 3.4
None	No IPR available	PANTHER	PTHR27000:SF171	SUBFAMILY NOT NAMED	coord: 3..91 score: 3.4

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG17g02390	Cucumber (Chinese Long) v3	cpecucB0384
Cp4.1LG17g02390	Cucumber (Chinese Long) v3	cpecucB0389
Cp4.1LG17g02390	Cucumber (Chinese Long) v3	cpecucB0405
Cp4.1LG17g02390	Wax gourd	cpewgoB0403
Cp4.1LG17g02390	Wax gourd	cpewgoB0428
Cp4.1LG17g02390	Cucurbita pepo (Zucchini)	cpecpeB164
Cp4.1LG17g02390	Cucurbita pepo (Zucchini)	cpecpeB232
Cp4.1LG17g02390	Cucumber (Gy14) v1	cgycpeB0677
Cp4.1LG17g02390	Cucumber (Gy14) v1	cgycpeB0954
Cp4.1LG17g02390	Cucurbita maxima (Rimu)	cmacpeB383
Cp4.1LG17g02390	Cucurbita maxima (Rimu)	cmacpeB825
Cp4.1LG17g02390	Cucurbita maxima (Rimu)	cmacpeB916
Cp4.1LG17g02390	Cucurbita moschata (Rifu)	cmocpeB346
Cp4.1LG17g02390	Cucurbita moschata (Rifu)	cmocpeB778
Cp4.1LG17g02390	Cucurbita moschata (Rifu)	cmocpeB853
Cp4.1LG17g02390	Wild cucumber (PI 183967)	cpecpiB315
Cp4.1LG17g02390	Wild cucumber (PI 183967)	cpecpiB324
Cp4.1LG17g02390	Cucumber (Chinese Long) v2	cpecuB313
Cp4.1LG17g02390	Cucumber (Chinese Long) v2	cpecuB323
Cp4.1LG17g02390	Bottle gourd (USVL1VR-Ls)	cpelsiB250
Cp4.1LG17g02390	Bottle gourd (USVL1VR-Ls)	cpelsiB271
Cp4.1LG17g02390	Watermelon (Charleston Gray)	cpewcgB300
Cp4.1LG17g02390	Watermelon (97103) v1	cpewmB332
Cp4.1LG17g02390	Watermelon (97103) v1	cpewmB342
Cp4.1LG17g02390	Melon (DHL92) v3.5.1	cpemeB286
Cp4.1LG17g02390	Melon (DHL92) v3.5.1	cpemeB317
Cp4.1LG17g02390	Cucumber (Gy14) v2	cgybcpeB357
Cp4.1LG17g02390	Cucumber (Gy14) v2	cgybcpeB785
Cp4.1LG17g02390	Melon (DHL92) v3.6.1	cpemedB334
Cp4.1LG17g02390	Melon (DHL92) v3.6.1	cpemedB370
Cp4.1LG17g02390	Melon (DHL92) v3.6.1	cpemedB372
Cp4.1LG17g02390	Silver-seed gourd	carcpeB0323
Cp4.1LG17g02390	Silver-seed gourd	carcpeB0326
Cp4.1LG17g02390	Silver-seed gourd	carcpeB0883
Cp4.1LG17g02390	Silver-seed gourd	carcpeB1503