Cp4.1LG17g02360 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTGCCTATGAAGAAATTATAGAAGCAACACAAGACTTGGATATTAAATATTGCATTGGCACTAGTGGGTATGGAAGTGTTTATAGAGCAAGGCCTCCAAACGGTAAGGTCGTAGCTCTAAAGAAACTCCACACCCGTGAAGCACAAGAGACAACTCTTTTCAAAAGTTTCTAAAATGAAGTCGATATGTTGAAAGTGAAAAGGCACAAGAATATTATTAAACTTCATGGATATTGTCTCCCTAAGTTTCACATGCTATGTCATACATAGATCATGATTGCATTACTCCAATCATTCATCGAGACGCTACAACTAGTAATATACTTTTGGACTCAAATCTAGAAGATTTTCTATTTGATTTTGGTATCTCAAGATTACTTGATCTTAAATCATCTTATCATACCACTGTTGGCAGAACTTGTGGATATATAGCTCCCGGTGAGAACATATTATAGTAATGATTAATAATCCAGAATTAGCATACACCGTGGTCATAACAGAAAAATGTGATGTCTACAGCTTTGGAGTGGTGGCATTGGAAGTAATAATAGGAAAGCATCATGGAGAATTATTAACATACTTGTGGTCAAAATCTTCTCCACATATATTCATCAATTATTTTTTAGACTCACAACTAAATCTCCTTTACTCCAAATTGGAGTGGCACAAAGTATACTTCTCACATTAA ATTGCCTATGAAGAAATTATAGAAGCAACACAAGACTTGGATATTAAATATTGCATTGGCACTAGTGGGTATGGAAGTGTTTATAGAGCAAGGCCTCCAAACGGTAAGGTCGTAGCTCTAAAGAAACTCCACACCCGTGAAGCACAAGAGACAACTCTTTTCAAAATTTCACATGCTATGTCATACATAGATCATGATTGCATTACTCCAATCATTCATCGAGACGCTACAACTAGTAATATACTTTTGGACTCAAATCTAGAAGATTTTCTATTTGATTTTGGTATCTCAAGATTACTTGATCTTAAATCATCTTATCATACCACTGTTGGCAGAACTTGTGGATATATAGCTCCCGAATTAGCATACACCGTGGTCATAACAGAAAAATGTGATGTCTACAGCTTTGGAGTGGTGGCATTGGAAGTAATAATAGGAAAGCATCATGGAGAATTATTAACATACTTGTGGTCAAAATCTTCTCCACATATATTCATCAATTATTTTTTAGACTCACAACTAAATCTCCTTTACTCCAAATTGGAGTGGCACAAAGTATACTTCTCACATTAA ATTGCCTATGAAGAAATTATAGAAGCAACACAAGACTTGGATATTAAATATTGCATTGGCACTAGTGGGTATGGAAGTGTTTATAGAGCAAGGCCTCCAAACGGTAAGGTCGTAGCTCTAAAGAAACTCCACACCCGTGAAGCACAAGAGACAACTCTTTTCAAAATTTCACATGCTATGTCATACATAGATCATGATTGCATTACTCCAATCATTCATCGAGACGCTACAACTAGTAATATACTTTTGGACTCAAATCTAGAAGATTTTCTATTTGATTTTGGTATCTCAAGATTACTTGATCTTAAATCATCTTATCATACCACTGTTGGCAGAACTTGTGGATATATAGCTCCCGAATTAGCATACACCGTGGTCATAACAGAAAAATGTGATGTCTACAGCTTTGGAGTGGTGGCATTGGAAGTAATAATAGGAAAGCATCATGGAGAATTATTAACATACTTGTGGTCAAAATCTTCTCCACATATATTCATCAATTATTTTTTAGACTCACAACTAAATCTCCTTTACTCCAAATTGGAGTGGCACAAAGTATACTTCTCACATTAA IAYEEIIEATQDLDIKYCIGTSGYGSVYRARPPNGKVVALKKLHTREAQETTLFKISHAMSYIDHDCITPIIHRDATTSNILLDSNLEDFLFDFGISRLLDLKSSYHTTVGRTCGYIAPELAYTVVITEKCDVYSFGVVALEVIIGKHHGELLTYLWSKSSPHIFINYFLDSQLNLLYSKLEWHKVYFSH
BLAST of Cp4.1LG17g02360 vs. Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 3.3e-26 Identity = 58/119 (48.74%), Postives = 83/119 (69.75%), Query Frame = 1
BLAST of Cp4.1LG17g02360 vs. Swiss-Prot
Match: MIK2_ARATH (MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana GN=MIK2 PE=1 SV=3) HSP 1 Score: 107.5 bits (267), Expect = 1.7e-22 Identity = 55/107 (51.40%), Postives = 75/107 (70.09%), Query Frame = 1
BLAST of Cp4.1LG17g02360 vs. Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 6.0e-20 Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 1
BLAST of Cp4.1LG17g02360 vs. Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 7.8e-20 Identity = 52/126 (41.27%), Postives = 77/126 (61.11%), Query Frame = 1
BLAST of Cp4.1LG17g02360 vs. Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.0e-19 Identity = 49/111 (44.14%), Postives = 72/111 (64.86%), Query Frame = 1
BLAST of Cp4.1LG17g02360 vs. TrEMBL
Match: A0A059AJJ1_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_I00181 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.1e-47 Identity = 100/208 (48.08%), Postives = 138/208 (66.35%), Query Frame = 1
BLAST of Cp4.1LG17g02360 vs. TrEMBL
Match: A0A151UBJ2_CAJCA (Putative LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Cajanus cajan GN=KK1_020820 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 4.9e-45 Identity = 102/198 (51.52%), Postives = 128/198 (64.65%), Query Frame = 1
BLAST of Cp4.1LG17g02360 vs. TrEMBL
Match: A0A0B2Q0X7_GLYSO (Putative LRR receptor-like serine/threonine-protein kinase OS=Glycine soja GN=glysoja_019315 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 9.2e-44 Identity = 99/189 (52.38%), Postives = 128/189 (67.72%), Query Frame = 1
BLAST of Cp4.1LG17g02360 vs. TrEMBL
Match: A0A068VEJ5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00012663001 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 1.6e-43 Identity = 97/198 (48.99%), Postives = 128/198 (64.65%), Query Frame = 1
BLAST of Cp4.1LG17g02360 vs. TrEMBL
Match: A0A068V0C1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00040330001 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 2.1e-43 Identity = 99/201 (49.25%), Postives = 129/201 (64.18%), Query Frame = 1
BLAST of Cp4.1LG17g02360 vs. TAIR10
Match: AT1G35710.1 (AT1G35710.1 Protein kinase family protein with leucine-rich repeat domain) HSP 1 Score: 119.8 bits (299), Expect = 1.8e-27 Identity = 58/119 (48.74%), Postives = 83/119 (69.75%), Query Frame = 1
BLAST of Cp4.1LG17g02360 vs. TAIR10
Match: AT4G08850.1 (AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein) HSP 1 Score: 107.5 bits (267), Expect = 9.5e-24 Identity = 55/107 (51.40%), Postives = 75/107 (70.09%), Query Frame = 1
BLAST of Cp4.1LG17g02360 vs. TAIR10
Match: AT1G17750.1 (AT1G17750.1 PEP1 receptor 2) HSP 1 Score: 99.0 bits (245), Expect = 3.4e-21 Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 1
BLAST of Cp4.1LG17g02360 vs. TAIR10
Match: AT2G33170.1 (AT2G33170.1 Leucine-rich repeat receptor-like protein kinase family protein) HSP 1 Score: 98.6 bits (244), Expect = 4.4e-21 Identity = 52/126 (41.27%), Postives = 77/126 (61.11%), Query Frame = 1
BLAST of Cp4.1LG17g02360 vs. TAIR10
Match: AT4G20140.1 (AT4G20140.1 Leucine-rich repeat transmembrane protein kinase) HSP 1 Score: 98.2 bits (243), Expect = 5.7e-21 Identity = 49/111 (44.14%), Postives = 72/111 (64.86%), Query Frame = 1
BLAST of Cp4.1LG17g02360 vs. NCBI nr
Match: gi|296082878|emb|CBI22179.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 201.1 bits (510), Expect = 1.8e-48 Identity = 107/199 (53.77%), Postives = 136/199 (68.34%), Query Frame = 1
BLAST of Cp4.1LG17g02360 vs. NCBI nr
Match: gi|297738138|emb|CBI27339.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 199.5 bits (506), Expect = 5.2e-48 Identity = 105/198 (53.03%), Postives = 133/198 (67.17%), Query Frame = 1
BLAST of Cp4.1LG17g02360 vs. NCBI nr
Match: gi|629087939|gb|KCW54192.1| (hypothetical protein EUGRSUZ_I00181, partial [Eucalyptus grandis]) HSP 1 Score: 198.0 bits (502), Expect = 1.5e-47 Identity = 100/208 (48.08%), Postives = 138/208 (66.35%), Query Frame = 1
BLAST of Cp4.1LG17g02360 vs. NCBI nr
Match: gi|296087789|emb|CBI35045.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 196.4 bits (498), Expect = 4.4e-47 Identity = 104/200 (52.00%), Postives = 133/200 (66.50%), Query Frame = 1
BLAST of Cp4.1LG17g02360 vs. NCBI nr
Match: gi|702452598|ref|XP_010025988.1| (PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Eucalyptus grandis]) HSP 1 Score: 193.7 bits (491), Expect = 2.9e-46 Identity = 95/173 (54.91%), Postives = 127/173 (73.41%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |