Cp4.1LG17g02310 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTAGTGTTCACTCACGCACCACCACCACCATGTTGCCTCCTGGGGCGTCTAGGAAGCGGAAGGAAGTTGAGGCGTTTGTGAAGCCGAAAGCTGTGGGAGCCGACTCCGTTGTGTCGAATCGCCTTCTGGCTGGCTACTTGGCTCATGAGTTTCTCAGTAAAGGCACTTTGTTTGGGGAGATATACGAGCCGGCTCGAAGTGAAGCCGTTGGAATGACTTGCTCGCGGCCAGCCGAGTATAAGAAGACGAAGCCGGAAGCCGCTGCTGCGCCTAGTGTTGAAAAGGAAAATCAGAGCTATGCTGAGGTGGCAAGCATCTTGAAGATGGAGGGGGCCCACTTGCCTGGGATTGTTAACCCGGCCCAGCTCGCTCGGTGGATTAAAATGTAA ATGAGTAGTGTTCACTCACGCACCACCACCACCATGTTGCCTCCTGGGGCGTCTAGGAAGCGGAAGGAAGTTGAGGCGTTTGTGAAGCCGAAAGCTGTGGGAGCCGACTCCGTTGTGTCGAATCGCCTTCTGGCTGGCTACTTGGCTCATGAGTTTCTCAGTAAAGGCACTTTGTTTGGGGAGATATACGAGCCGGCTCGAAGTGAAGCCGTTGGAATGACTTGCTCGCGGCCAGCCGAGTATAAGAAGACGAAGCCGGAAGCCGCTGCTGCGCCTAGTGTTGAAAAGGAAAATCAGAGCTATGCTGAGGTGGCAAGCATCTTGAAGATGGAGGGGGCCCACTTGCCTGGGATTGTTAACCCGGCCCAGCTCGCTCGGTGGATTAAAATGTAA ATGAGTAGTGTTCACTCACGCACCACCACCACCATGTTGCCTCCTGGGGCGTCTAGGAAGCGGAAGGAAGTTGAGGCGTTTGTGAAGCCGAAAGCTGTGGGAGCCGACTCCGTTGTGTCGAATCGCCTTCTGGCTGGCTACTTGGCTCATGAGTTTCTCAGTAAAGGCACTTTGTTTGGGGAGATATACGAGCCGGCTCGAAGTGAAGCCGTTGGAATGACTTGCTCGCGGCCAGCCGAGTATAAGAAGACGAAGCCGGAAGCCGCTGCTGCGCCTAGTGTTGAAAAGGAAAATCAGAGCTATGCTGAGGTGGCAAGCATCTTGAAGATGGAGGGGGCCCACTTGCCTGGGATTGTTAACCCGGCCCAGCTCGCTCGGTGGATTAAAATGTAA MSSVHSRTTTTMLPPGASRKRKEVEAFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEIYEPARSEAVGMTCSRPAEYKKTKPEAAAAPSVEKENQSYAEVASILKMEGAHLPGIVNPAQLARWIKM
BLAST of Cp4.1LG17g02310 vs. TrEMBL
Match: A0A0A0LI65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G173040 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.1e-35 Identity = 87/120 (72.50%), Postives = 95/120 (79.17%), Query Frame = 1
BLAST of Cp4.1LG17g02310 vs. TrEMBL
Match: A0A067L783_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02363 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 1.6e-26 Identity = 74/133 (55.64%), Postives = 90/133 (67.67%), Query Frame = 1
BLAST of Cp4.1LG17g02310 vs. TrEMBL
Match: B9HSH2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s07950g PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.5e-24 Identity = 73/143 (51.05%), Postives = 93/143 (65.03%), Query Frame = 1
BLAST of Cp4.1LG17g02310 vs. TrEMBL
Match: A0A067ES81_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g037312mg PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 4.3e-24 Identity = 70/148 (47.30%), Postives = 93/148 (62.84%), Query Frame = 1
BLAST of Cp4.1LG17g02310 vs. TrEMBL
Match: V4S9E1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v100061281mg PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 5.6e-24 Identity = 69/147 (46.94%), Postives = 91/147 (61.90%), Query Frame = 1
BLAST of Cp4.1LG17g02310 vs. TAIR10
Match: AT5G44060.1 (AT5G44060.1 unknown protein) HSP 1 Score: 97.1 bits (240), Expect = 8.8e-21 Identity = 50/96 (52.08%), Postives = 71/96 (73.96%), Query Frame = 1
BLAST of Cp4.1LG17g02310 vs. TAIR10
Match: AT3G23440.1 (AT3G23440.1 embryo sac development arrest 6) HSP 1 Score: 84.0 bits (206), Expect = 7.7e-17 Identity = 46/115 (40.00%), Postives = 68/115 (59.13%), Query Frame = 1
BLAST of Cp4.1LG17g02310 vs. TAIR10
Match: AT1G04000.1 (AT1G04000.1 unknown protein) HSP 1 Score: 83.2 bits (204), Expect = 1.3e-16 Identity = 49/105 (46.67%), Postives = 68/105 (64.76%), Query Frame = 1
BLAST of Cp4.1LG17g02310 vs. NCBI nr
Match: gi|700206466|gb|KGN61585.1| (hypothetical protein Csa_2G173040 [Cucumis sativus]) HSP 1 Score: 157.5 bits (397), Expect = 1.5e-35 Identity = 87/120 (72.50%), Postives = 95/120 (79.17%), Query Frame = 1
BLAST of Cp4.1LG17g02310 vs. NCBI nr
Match: gi|802581728|ref|XP_012069878.1| (PREDICTED: uncharacterized protein LOC105632168 [Jatropha curcas]) HSP 1 Score: 127.1 bits (318), Expect = 2.2e-26 Identity = 74/133 (55.64%), Postives = 90/133 (67.67%), Query Frame = 1
BLAST of Cp4.1LG17g02310 vs. NCBI nr
Match: gi|743858444|ref|XP_011030460.1| (PREDICTED: uncharacterized protein LOC105129902 [Populus euphratica]) HSP 1 Score: 121.7 bits (304), Expect = 9.4e-25 Identity = 73/143 (51.05%), Postives = 94/143 (65.73%), Query Frame = 1
BLAST of Cp4.1LG17g02310 vs. NCBI nr
Match: gi|224110602|ref|XP_002315573.1| (hypothetical protein POPTR_0010s07950g [Populus trichocarpa]) HSP 1 Score: 120.6 bits (301), Expect = 2.1e-24 Identity = 73/143 (51.05%), Postives = 93/143 (65.03%), Query Frame = 1
BLAST of Cp4.1LG17g02310 vs. NCBI nr
Match: gi|568873064|ref|XP_006489678.1| (PREDICTED: uncharacterized protein LOC102616537 [Citrus sinensis]) HSP 1 Score: 119.4 bits (298), Expect = 4.7e-24 Identity = 70/148 (47.30%), Postives = 93/148 (62.84%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |