Cp4.1LG17g01930 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTTCTCGTCATGTCGACCCACAACACTAGCCTCCTTCTCTCTCTTTATCTGTGTGGCTAAAGGCAGAGCAGCGAGTACTTAAGACCGAGTCCTTTCCCAAAATTAGCATATTTTCTGCATCAAATCACAACTCCTAGATCTGATTTCTCTTTCGGTCTCTCCATTCTTTGTCGTTCTTTTCAATTTCTTCTTCCTTCACTTACTGGAAACTCTCGCTGTTCTAATCCTGACTCCTCGCACTCGCTTCCCGATCCGCTACCAGTAAGATTCCCTTGCCGTTTTCTTGTTTTTCTCCCATTTTCTGATTTGGTTTCTGTTTTGGATCTTAATTCTTTTTGGTTCTGGATCTCTCGTTGCTTGATTCCTTGATTTTTTTTTTTTTCGAGATGTTTATTGGTTATTTTAATCGATGCGTTTATGAGTGTTGGATGGGATTTTGCTCTGGTGATTTGTCAGATCTCAGGATTTGGTTGAATGCACCGACACTCGTTGCTTTCGTCGCTTTAGCTATTTTCGTATTTTGATGTCGGTTTAATCACGAGATGACTGTCAGTGTATTGTACGATGTTCAATTTGCTTGGAGTTTGGTTGGAATTTTTTCTCCCCTGTTATGCATATTGGAAGAAATTTCTGTTGCTTAAACTTGTGTTATGGTGTTTGAGAATGTCGGATTTCTTGACTCTTCCCATTTACTGGGAAGGATTATTGAATTTACTGCACGTTTAAGTTATTAATCTAAACCGACATTTTGGGCTAACAGCTTAAAGGAAAAAAGTTCAACGCTCAGCTGGTGGCTTGGCTTTCCCCCTCCCTGATTGGATAAAGGATTGCCAATATAGTAATTGGGGCTAATTCACTTACTTTAAGTAGAACGGGTTTACATATTTGTAAATCAGGTTATTTGTGTTTTTTGGCCTGTTCTTCTGTGGTGGAACTTTATGGTTTCCTGAATTTTTACAGATTATTGCCGTCATTTTCTACTGTAGCTTCAGGAGGGGAGGTTATTCCAGTTTTCCTTTAGGTGATTCATGCAACATTGTTCGTTTTCGTACTTGGGTCGAACTATATAGTTGAGAAAAGCTTGAAAGTTTGATAAATGACGAGGGGAAGATCTGATGGAACTCCGAAGAAGCGCTTAATCACTACCATATGTGTTGTGGCCATATTTCTTGGGTTTCTGTATGCATATTATGGATCCATTTTTGGCAATCAAGACCGAGGTGCATCGACTCTGCAGCACGGCAGCAAATCCTTGAGCCATTATTTGTTGGGGAGTGAAGACTCTGAAGAATCTTCAACCACAACTGTGCAGGAAGATCCAGAAGATGGTATCGTACCGAAAAGTTACCCGGTAAGTAATTGTCTTCCTTGAGCCAATATTTGTTGGGGGAGTGAAGACTCATGTAGTGTGATTCTTATATCATAGGTTTGTGACGATCGGCATTCGGAACTAATTCCCTGCTTGGACAGACATCTCATATATCAAATGAGATTGAAACTCGACCTTTCTTTAATGGAGCATTATGAAAGACACTGCCCACCACCAGAGAGGCGGTTCAATTGCCTGATTCCGCCTCCAGCAGGATATAAGGTAGCTATTTGGTAACACTGAGTAACATCTGAAGGTTTTGCTGGTTTCTAACTTTTACTTGTTACTAATGTGTTGCTGCAGGTTCCAATTAAGTGGCCAAAGAGCAGAGACGAAGTGTGGAAAGCGAACATACCGCATACTCATCTTGCTCACGAGAAATCGGATCAGAACTGGATGGTTGTCAAAGGCGAAAAAATTGTGTTCCCTGGAGGAGGTACTCATTTTCACTATGGAGCTGATAAGTACATTGCTTCAATTGCAAATGTAAGACTTCTGAACCCTTTAGAAAGGAAGGATAACACAACTTTTTTTGCTTTTTGTATGATATTTTGAATACAAAGTTCATTAAATGACTCAAATTTGCACATTTTTACAGAATATCATGTTTTTATCTCTACCATTCATGGTGTTGTCTCAAGTTTATGATATTCATCTTTCAGATGCTCAACTTTTCAAATGATAAAATGAACGATGAAGGAAGACTGCGTACTGTTCTTGATGTCGGTTGTGGTGTCGCAAGTTTTGGAGGATATCTTCTCTCTTCTAATATCATAGCAATGTCCTTAGCACCAAATGATGTTCATCAAAATCAAATTCAGTTTGCTTTAGAAAGAGGAATTCCTGCATACCTTGGTGTTTTAGGAACGAAGAGGCTCCCTTACCCGAGCAGATCTTTTGAACTTGCACACTGTTCTCGGTGTCGAATTGATTGGCTTCAAAGAGACGGGATTCTTCTTCTCGAGCTAGATAGAGTACTTAGACCTGGTGGCTATTTTGCTTATTCATCTCCAGAAGCTTATGCACAGGATGAGGAGGATCTGAGAATATGGAGAGAAATGAGTGCCCTTGTGGGTCGTATGTGTTGGAGAATAGCTGCAAAGAGGAATCAGACTGTAATTTGGCAAAAACCCCTTACAAATGATTGTTATATGCAAAGAGAACCCGGTACTCGTCCTCCTCTTTGCCGATCTACTGATGATCCTGATGCTGTTTGGGGTGTGCTGATGGAAGCTTGTATCACTCCTTACTCGGATCGTAAGTTCCTTGTCGAATGGCTTGATGTAGATTTTTGTTTACTTACTACTCAACGATGACACTGGGTTTGTTTATGCAGATGATCATAAAGCCAAGGGCAGTGGATTGGCTCCTTGGCCAGCTCGATTAACGTCACCTCCTCCACGACTTCAGGACTTTGGCTATTCTTCTGAAATGTTTGAAAAAGACACGGTAACTGAAACCCGGGGTGAATTCGACTAATTCAAATCCGGATGCCGAAGTTTCTGAACTTTTTATCGCCTTGTTGCAGGAAACTTGGCGGCGTAGAGTCGAGAGTTACTGGAATCTGCTGAGTCCAAAGATCGAATCGGATACTATCAGGAACGTGATGGACATGAAGGCACACATGGGATCGTTTGCAGCTGCTCTGAAGGACAAGGACGTGTGGGTGATGAATGTCGTTCAAGAAGACGGACCTAATACACTGAAGCTGATATATGACCGAGGCCTCATTGGCACTACCAATAACTGGTAGTCAACTGAAAAATGCACTTGCATATCCTTATGATTATATTCAAAATAGGTAAGCCAATTACTTGATACATTTTTAACAGGTGCGAAGCCTTCTCGACATATCCTCGTACATACGATCTTCTCCACGCATGGACCGTGTTTTCTGACATCGAGAAGAAAGAATGCAGCGCCGAGGACCTATTACTCGAGATGGATCGCATACTCAGACCCACTGGTTTCATCATTATCAGGGACAAGCAATCTGTTATAGATATGGTAAAGAAACATCTATCTGCATTGCACTGGGAAACAGTGGCAACTGCCAACTCCAGCTCCGATTCGGAACTGGAGAGCGACGAGGTCGTGTTTATCATCCAGAAGAAGCTGTGGCTGACAAGTGAGAGTGTGAGGGAGTCAGAATAAATACCAAAAGAGCCATCTTCTTTACAGTTCCCTGTTGCTGTTAAATTTTCCCATGCCCATCATCGTCGCCCGGAGGGATCAGATCAGCAAGCTAGCTAGTCGTCCCGACAACGAGTAACGATGCCAGTAAAAACGATTCCTTCAGTTCATTAGTGAGATATTTCACATTTCTATTTATTTACTTGTGTAATGCTTTAATTTATAATCTATAGTCGATGGATATTCTTCCAACATTATTTTTTTTGCTTCCCCTTTTTGCTGCTCTGTTATTAGGCCATTGTCTATCTCTACTTAAGTTATTTGATTATTAATTGAAGAACGGAAAATTTGGCCTAAAAGGTCATAGGAATATATAAATTTTTCT TGTTCTCGTCATGTCGACCCACAACACTAGCCTCCTTCTCTCTCTTTATCTGTGTGGCTAAAGGCAGAGCAGCGAGTACTTAAGACCGAGTCCTTTCCCAAAATTAGCATATTTTCTGCATCAAATCACAACTCCTAGATCTGATTTCTCTTTCGGTCTCTCCATTCTTTGTCGTTCTTTTCAATTTCTTCTTCCTTCACTTACTGGAAACTCTCGCTGTTCTAATCCTGACTCCTCGCACTCGCTTCCCGATCCGCTACCAATTATTGCCGTCATTTTCTACTGTAGCTTCAGGAGGGGAGGTTATTCCAGTTTTCCTTTAGGTGATTCATGCAACATTGTTCGTTTTCGTACTTGGGTCGAACTATATAGTTGAGAAAAGCTTGAAAGTTTGATAAATGACGAGGGGAAGATCTGATGGAACTCCGAAGAAGCGCTTAATCACTACCATATGTGTTGTGGCCATATTTCTTGGGTTTCTGTATGCATATTATGGATCCATTTTTGGCAATCAAGACCGAGGTGCATCGACTCTGCAGCACGGCAGCAAATCCTTGAGCCATTATTTGTTGGGGAGTGAAGACTCTGAAGAATCTTCAACCACAACTGTGCAGGAAGATCCAGAAGATGGTATCGTACCGAAAAGTTACCCGGTTTGTGACGATCGGCATTCGGAACTAATTCCCTGCTTGGACAGACATCTCATATATCAAATGAGATTGAAACTCGACCTTTCTTTAATGGAGCATTATGAAAGACACTGCCCACCACCAGAGAGGCGGTTCAATTGCCTGATTCCGCCTCCAGCAGGATATAAGGTAGCTATTTGACCTGGTGGCTATTTTGCTTATTCATCTCCAGAAGCTTATGCACAGGATGAGGAGGATCTGAGAATATGGAGAGAAATGAGTGCCCTTGTGGGTCGTATGTGTTGGAGAATAGCTGCAAAGAGGAATCAGACTGTAATTTGGCAAAAACCCCTTACAAATGATTGTTATATGCAAAGAGAACCCGGTACTCGTCCTCCTCTTTGCCGATCTACTGATGATCCTGATGCTGTTTGGGGTGTGCTGATGGAAGCTTGTATCACTCCTTACTCGGATCATGATCATAAAGCCAAGGGCAGTGGATTGGCTCCTTGGCCAGCTCGATTAACGTCACCTCCTCCACGACTTCAGGACTTTGGCTATTCTTCTGAAATGTTTGAAAAAGACACGGAAACTTGGCGGCGTAGAGTCGAGAGTTACTGGAATCTGCTGAGTCCAAAGATCGAATCGGATACTATCAGGAACGTGATGGACATGAAGGCACACATGGGATCGTTTGCAGCTGCTCTGAAGGACAAGGACGTGTGGGTGATGAATGTCGTTCAAGAAGACGGACCTAATACACTGAAGCTGATATATGACCGAGGCCTCATTGGCACTACCAATAACTGGTGCGAAGCCTTCTCGACATATCCTCGTACATACGATCTTCTCCACGCATGGACCGTGTTTTCTGACATCGAGAAGAAAGAATGCAGCGCCGAGGACCTATTACTCGAGATGGATCGCATACTCAGACCCACTGGTTTCATCATTATCAGGGACAAGCAATCTGTTATAGATATGGTAAAGAAACATCTATCTGCATTGCACTGGGAAACAGTGGCAACTGCCAACTCCAGCTCCGATTCGGAACTGGAGAGCGACGAGGTCGTGTTTATCATCCAGAAGAAGCTGTGGCTGACAAGTGAGAGTGTGAGGGAGTCAGAATAAATACCAAAAGAGCCATCTTCTTTACAGTTCCCTGTTGCTGTTAAATTTTCCCATGCCCATCATCGTCGCCCGGAGGGATCAGATCAGCAAGCTAGCTAGTCGTCCCGACAACGAGTAACGATGCCAGTAAAAACGATTCCTTCAGTTCATTAGTGAGATATTTCACATTTCTATTTATTTACTTGTGTAATGCTTTAATTTATAATCTATAGTCGATGGATATTCTTCCAACATTATTTTTTTTGCTTCCCCTTTTTGCTGCTCTGTTATTAGGCCATTGTCTATCTCTACTTAAGTTATTTGATTATTAATTGAAGAACGGAAAATTTGGCCTAAAAGGTCATAGGAATATATAAATTTTTCT ATGAGTGCCCTTGTGGGTCGTATGTGTTGGAGAATAGCTGCAAAGAGGAATCAGACTGTAATTTGGCAAAAACCCCTTACAAATGATTGTTATATGCAAAGAGAACCCGGTACTCGTCCTCCTCTTTGCCGATCTACTGATGATCCTGATGCTGTTTGGGGTGTGCTGATGGAAGCTTGTATCACTCCTTACTCGGATCATGATCATAAAGCCAAGGGCAGTGGATTGGCTCCTTGGCCAGCTCGATTAACGTCACCTCCTCCACGACTTCAGGACTTTGGCTATTCTTCTGAAATGTTTGAAAAAGACACGGAAACTTGGCGGCGTAGAGTCGAGAGTTACTGGAATCTGCTGAGTCCAAAGATCGAATCGGATACTATCAGGAACGTGATGGACATGAAGGCACACATGGGATCGTTTGCAGCTGCTCTGAAGGACAAGGACGTGTGGGTGATGAATGTCGTTCAAGAAGACGGACCTAATACACTGAAGCTGATATATGACCGAGGCCTCATTGGCACTACCAATAACTGGTGCGAAGCCTTCTCGACATATCCTCGTACATACGATCTTCTCCACGCATGGACCGTGTTTTCTGACATCGAGAAGAAAGAATGCAGCGCCGAGGACCTATTACTCGAGATGGATCGCATACTCAGACCCACTGGTTTCATCATTATCAGGGACAAGCAATCTGTTATAGATATGGTAAAGAAACATCTATCTGCATTGCACTGGGAAACAGTGGCAACTGCCAACTCCAGCTCCGATTCGGAACTGGAGAGCGACGAGGTCGTGTTTATCATCCAGAAGAAGCTGTGGCTGACAAGTGAGAGTGTGAGGGAGTCAGAATAA MSALVGRMCWRIAAKRNQTVIWQKPLTNDCYMQREPGTRPPLCRSTDDPDAVWGVLMEACITPYSDHDHKAKGSGLAPWPARLTSPPPRLQDFGYSSEMFEKDTETWRRRVESYWNLLSPKIESDTIRNVMDMKAHMGSFAAALKDKDVWVMNVVQEDGPNTLKLIYDRGLIGTTNNWCEAFSTYPRTYDLLHAWTVFSDIEKKECSAEDLLLEMDRILRPTGFIIIRDKQSVIDMVKKHLSALHWETVATANSSSDSELESDEVVFIIQKKLWLTSESVRESE
BLAST of Cp4.1LG17g01930 vs. Swiss-Prot
Match: PMT3_ARATH (Probable methyltransferase PMT3 OS=Arabidopsis thaliana GN=At4g14360 PE=2 SV=1) HSP 1 Score: 494.6 bits (1272), Expect = 7.3e-139 Identity = 228/284 (80.28%), Postives = 256/284 (90.14%), Query Frame = 1
BLAST of Cp4.1LG17g01930 vs. Swiss-Prot
Match: PMT1_ARATH (Probable methyltransferase PMT1 OS=Arabidopsis thaliana GN=At3g23300 PE=2 SV=2) HSP 1 Score: 492.7 bits (1267), Expect = 2.8e-138 Identity = 225/284 (79.23%), Postives = 259/284 (91.20%), Query Frame = 1
BLAST of Cp4.1LG17g01930 vs. Swiss-Prot
Match: PMT8_ARATH (Probable methyltransferase PMT8 OS=Arabidopsis thaliana GN=At1g04430 PE=2 SV=1) HSP 1 Score: 492.3 bits (1266), Expect = 3.6e-138 Identity = 225/290 (77.59%), Postives = 259/290 (89.31%), Query Frame = 1
BLAST of Cp4.1LG17g01930 vs. Swiss-Prot
Match: PMT9_ARATH (Probable methyltransferase PMT9 OS=Arabidopsis thaliana GN=At5g14430 PE=2 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 1.2e-96 Identity = 156/275 (56.73%), Postives = 202/275 (73.45%), Query Frame = 1
BLAST of Cp4.1LG17g01930 vs. Swiss-Prot
Match: PMTC_ARATH (Probable methyltransferase PMT12 OS=Arabidopsis thaliana GN=At5g06050 PE=2 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 1.5e-62 Identity = 121/255 (47.45%), Postives = 161/255 (63.14%), Query Frame = 1
BLAST of Cp4.1LG17g01930 vs. TrEMBL
Match: A0A0A0LI73_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G174120 PE=4 SV=1) HSP 1 Score: 554.7 bits (1428), Expect = 6.6e-155 Identity = 258/284 (90.85%), Postives = 274/284 (96.48%), Query Frame = 1
BLAST of Cp4.1LG17g01930 vs. TrEMBL
Match: A0A061EMI2_THECC (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_020904 PE=4 SV=1) HSP 1 Score: 532.3 bits (1370), Expect = 3.5e-148 Identity = 246/284 (86.62%), Postives = 268/284 (94.37%), Query Frame = 1
BLAST of Cp4.1LG17g01930 vs. TrEMBL
Match: A0A0D2RFT3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G050500 PE=4 SV=1) HSP 1 Score: 528.9 bits (1361), Expect = 3.9e-147 Identity = 247/284 (86.97%), Postives = 266/284 (93.66%), Query Frame = 1
BLAST of Cp4.1LG17g01930 vs. TrEMBL
Match: A0A0B0MYH2_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_28527 PE=4 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 2.5e-146 Identity = 247/284 (86.97%), Postives = 264/284 (92.96%), Query Frame = 1
BLAST of Cp4.1LG17g01930 vs. TrEMBL
Match: M5XVM2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002881mg PE=4 SV=1) HSP 1 Score: 523.9 bits (1348), Expect = 1.3e-145 Identity = 241/284 (84.86%), Postives = 268/284 (94.37%), Query Frame = 1
BLAST of Cp4.1LG17g01930 vs. TAIR10
Match: AT4G14360.1 (AT4G14360.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 494.6 bits (1272), Expect = 4.1e-140 Identity = 228/284 (80.28%), Postives = 256/284 (90.14%), Query Frame = 1
BLAST of Cp4.1LG17g01930 vs. TAIR10
Match: AT3G23300.1 (AT3G23300.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 492.7 bits (1267), Expect = 1.6e-139 Identity = 225/284 (79.23%), Postives = 259/284 (91.20%), Query Frame = 1
BLAST of Cp4.1LG17g01930 vs. TAIR10
Match: AT1G04430.1 (AT1G04430.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 492.3 bits (1266), Expect = 2.0e-139 Identity = 225/290 (77.59%), Postives = 259/290 (89.31%), Query Frame = 1
BLAST of Cp4.1LG17g01930 vs. TAIR10
Match: AT5G14430.1 (AT5G14430.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 354.4 bits (908), Expect = 6.7e-98 Identity = 156/275 (56.73%), Postives = 202/275 (73.45%), Query Frame = 1
BLAST of Cp4.1LG17g01930 vs. TAIR10
Match: AT5G06050.1 (AT5G06050.1 Putative methyltransferase family protein) HSP 1 Score: 241.1 bits (614), Expect = 8.2e-64 Identity = 121/255 (47.45%), Postives = 161/255 (63.14%), Query Frame = 1
BLAST of Cp4.1LG17g01930 vs. NCBI nr
Match: gi|659121413|ref|XP_008460648.1| (PREDICTED: probable methyltransferase PMT3 [Cucumis melo]) HSP 1 Score: 555.8 bits (1431), Expect = 4.3e-155 Identity = 257/284 (90.49%), Postives = 273/284 (96.13%), Query Frame = 1
BLAST of Cp4.1LG17g01930 vs. NCBI nr
Match: gi|778668764|ref|XP_011649151.1| (PREDICTED: probable methyltransferase PMT3 [Cucumis sativus]) HSP 1 Score: 554.7 bits (1428), Expect = 9.5e-155 Identity = 258/284 (90.85%), Postives = 274/284 (96.48%), Query Frame = 1
BLAST of Cp4.1LG17g01930 vs. NCBI nr
Match: gi|590659466|ref|XP_007035135.1| (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isoform 1 [Theobroma cacao]) HSP 1 Score: 532.3 bits (1370), Expect = 5.1e-148 Identity = 246/284 (86.62%), Postives = 268/284 (94.37%), Query Frame = 1
BLAST of Cp4.1LG17g01930 vs. NCBI nr
Match: gi|823164076|ref|XP_012481987.1| (PREDICTED: probable methyltransferase PMT3 [Gossypium raimondii]) HSP 1 Score: 528.9 bits (1361), Expect = 5.6e-147 Identity = 247/284 (86.97%), Postives = 266/284 (93.66%), Query Frame = 1
BLAST of Cp4.1LG17g01930 vs. NCBI nr
Match: gi|728820892|gb|KHG03986.1| (hypothetical protein F383_28527 [Gossypium arboreum]) HSP 1 Score: 526.2 bits (1354), Expect = 3.6e-146 Identity = 247/284 (86.97%), Postives = 264/284 (92.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |