BLAST of Cp4.1LG17g01290 vs. Swiss-Prot
Match:
PP394_ARATH (Pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1)
HSP 1 Score: 140.6 bits (353), Expect = 1.5e-32
Identity = 77/177 (43.50%), Postives = 100/177 (56.50%), Query Frame = 1
Query: 13 DGRLLFDSCSKLDSVCCNIMLCGYVKLRELDNARQLFDKMPDTGCVSFTTMILG------ 72
D +F +KLDS NIM+ GYV+ R L +A +LFD MP+ CVS+TT+I G
Sbjct: 94 DAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQ 153
Query: 73 -----------------------------CSHMGGIWNCWMLNALVIKLHFVSHVLISTT 132
CSH+GGIW+C ML +L IKL V +ST
Sbjct: 154 WSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTN 213
Query: 133 LLYMYCVCPSLKDARRFFYEMSVRNVASTWNKILKGYVKAGLVDEARELFESIAERD 155
LL+MYC+C LKDAR+ F EM RN+ TWN +L GY KAGL+++A ELF+ I E+D
Sbjct: 214 LLHMYCLCLCLKDARKLFDEMPERNLV-TWNVMLNGYSKAGLIEQAEELFDQITEKD 269
BLAST of Cp4.1LG17g01290 vs. Swiss-Prot
Match:
PP369_ARATH (Pentatricopeptide repeat-containing protein At5g08305 OS=Arabidopsis thaliana GN=PCMP-E105 PE=2 SV=1)
HSP 1 Score: 84.3 bits (207), Expect = 1.3e-15
Identity = 48/151 (31.79%), Postives = 79/151 (52.32%), Query Frame = 1
Query: 8 NGSSTDGRLLFDSCSKLDSVCCNIMLCGYVKLRELDNARQLFDKMPDTGC-----VSFTT 67
+G RL+FD S+ D V + M+ GYVK E + A ++FD+M G V+ +
Sbjct: 187 SGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVS 246
Query: 68 MILGCSHMGGIWNCWMLNALVIKLHFVSHVLISTTLLYMYCVCPSLKDARRFFYEMSVRN 127
+I C+H+G + ++ ++ +H V++ T+L+ MY C S+ DA FY SV+
Sbjct: 247 VICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKE 306
Query: 128 V-ASTWNKILKGYVKAGLVDEARELFESIAE 153
A WN I+ G G + E+ +LF + E
Sbjct: 307 TDALMWNAIIGGLASHGFIRESLQLFHKMRE 337
BLAST of Cp4.1LG17g01290 vs. Swiss-Prot
Match:
PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1)
HSP 1 Score: 81.6 bits (200), Expect = 8.4e-15
Identity = 60/183 (32.79%), Postives = 88/183 (48.09%), Query Frame = 1
Query: 1 MIVGVKSNGSSTDGRLLFDSCSKLDSVCCNIMLCGYVKLRELDNARQLFDKMPDTGCVSF 60
MI G NG R LFD + D V N+M+ GYV+ R L AR+LF+ MP+ S+
Sbjct: 101 MISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSW 160
Query: 61 TTMILGCSHMGGI-----------------WNCW---------MLNALVIKLHFVSHVLI 120
TM+ G + G + WN M A ++ + L+
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALV 220
Query: 121 S-TTLLYMYCVCPSLKDARRFFYEMSVRNVASTWNKILKGYVKAGLVDEARELFESIAER 157
S LL + + +AR+FF M+VR+V S WN I+ GY ++G +DEAR+LF+ +
Sbjct: 221 SWNCLLGGFVKKKKIVEARQFFDSMNVRDVVS-WNTIITGYAQSGKIDEARQLFDESPVQ 280
BLAST of Cp4.1LG17g01290 vs. Swiss-Prot
Match:
PPR13_ARATH (Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2 SV=1)
HSP 1 Score: 75.1 bits (183), Expect = 7.8e-13
Identity = 56/188 (29.79%), Postives = 87/188 (46.28%), Query Frame = 1
Query: 2 IVGVKSN-GSSTDGRLLFDSCSKLDSVCCNIMLCGYVKLRELDNARQLFDKMPDTGCVSF 61
I+G+ S G RL+FD +SV N M+ GY++ ++DNA ++FDKMP+ +S+
Sbjct: 115 IIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISW 174
Query: 62 TTMILGCSHMGG-----IWNCWM---------------LNA---------------LVIK 121
T MI G G +W M LNA V+
Sbjct: 175 TAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLS 234
Query: 122 LHFVSHVLISTTLLYMYCVCPSLKDARRFFYEMSVRNVASTWNKILKGYVKAGLVDEARE 154
F ++V +S +L+ +YC C ++ AR+ FY M R V S WN ++ G+ G E+
Sbjct: 235 QDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVS-WNSVIVGFAANGNAHESLV 294
BLAST of Cp4.1LG17g01290 vs. Swiss-Prot
Match:
PP336_ARATH (Pentatricopeptide repeat-containing protein At4g22760 OS=Arabidopsis thaliana GN=PCMP-E6 PE=2 SV=1)
HSP 1 Score: 73.6 bits (179), Expect = 2.3e-12
Identity = 46/138 (33.33%), Postives = 76/138 (55.07%), Query Frame = 1
Query: 18 FDSCSKLDSVCCNIMLCGYVKLRELDNARQLFDKMPDTGCVSFTTMILGCSHMGGIWN-C 77
FD ++ ++V N +L GY++ ELD AR++FDK+P+ VS+ +I + G + N C
Sbjct: 162 FDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNAC 221
Query: 78 WMLNALVIKLHFVSHVLISTTLLYMYCVCPSLKDARRFFYEMSVRNVASTWNKILKGYVK 137
+ +A+ +K ++LI Y C +K AR +F M +N S W ++ GY K
Sbjct: 222 SLFSAMPLKSPASWNILIGG-----YVNCREMKLARTYFDAMPQKNGVS-WITMISGYTK 281
Query: 138 AGLVDEARELFESIAERD 155
G V A ELF ++++D
Sbjct: 282 LGDVQSAEELFRLMSKKD 293
BLAST of Cp4.1LG17g01290 vs. TrEMBL
Match:
A0A0A0KC16_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G239150 PE=4 SV=1)
HSP 1 Score: 198.4 bits (503), Expect = 6.8e-48
Identity = 108/183 (59.02%), Postives = 121/183 (66.12%), Query Frame = 1
Query: 9 GSSTDGRLLFDSCSKLDSVCCNIMLCGYVKLRELDNARQLFDKMPDTGCVSFTTMILG-- 68
G + RLLFDSCS LDSV CNIM+ GYVKLR+L+NARQLF KMP+ GCVS+TTMILG
Sbjct: 110 GLLSSARLLFDSCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLA 169
Query: 69 ---------------------------------CSHMGGIWNCWMLNALVIKLHFVSHVL 128
CSH+GGIWNC ML+ALVIKLHF VL
Sbjct: 170 QNDCWGEAIEVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVL 229
Query: 129 ISTTLLYMYCVCPSLKDARRFFYEMSVRNVASTWNKILKGYVKAGLVDEARELFESIAER 157
IST LL+MYCV SLKD +R F EM VRN S WN +LKGYVK+GLVD+ARELFE I ER
Sbjct: 230 ISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVS-WNVMLKGYVKSGLVDQARELFERIPER 289
BLAST of Cp4.1LG17g01290 vs. TrEMBL
Match:
W9RKN3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010038 PE=4 SV=1)
HSP 1 Score: 166.0 bits (419), Expect = 3.8e-38
Identity = 90/181 (49.72%), Postives = 108/181 (59.67%), Query Frame = 1
Query: 9 GSSTDGRLLFDSCSKLDSVCCNIMLCGYVKLRELDNARQLFDKMPDTGCVSFTTMILG-- 68
G +D R LFDSCSKLD+V CNIM+ GYVK +LDNARQLF+ MP GC+S+TTMI+G
Sbjct: 116 GFISDARTLFDSCSKLDTVSCNIMVSGYVKSGQLDNARQLFEIMPGKGCISYTTMIMGLA 175
Query: 69 ---------------------------------CSHMGGIWNCWMLNALVIKLHFVSHVL 128
C H+GGIW+C ML+ LVIKL + V
Sbjct: 176 RNECWKEATQLFKDMRFEGIAPNQVMMASLISACVHIGGIWDCRMLHGLVIKLQLLGSVF 235
Query: 129 ISTTLLYMYCVCPSLKDARRFFYEMSVRNVASTWNKILKGYVKAGLVDEARELFESIAER 155
+ST LL MYC C SL DA+ F EM RN+ S WN +L G+ KAGLVD ARELFE I +
Sbjct: 236 VSTNLLNMYCACSSLGDAKTLFDEMPERNIVS-WNVMLNGFSKAGLVDLARELFERIPVK 295
BLAST of Cp4.1LG17g01290 vs. TrEMBL
Match:
M5XIH8_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015699mg PE=4 SV=1)
HSP 1 Score: 154.1 bits (388), Expect = 1.5e-34
Identity = 85/173 (49.13%), Postives = 102/173 (58.96%), Query Frame = 1
Query: 17 LFDSCSKLDSVCCNIMLCGYVKLRELDNARQLFDKMPDTGCVSFTTMILG---------- 76
LF SCS+LD V CNIM+ GYVK LDNAR+LF+ MP GCVS+TTMI+G
Sbjct: 89 LFGSCSELDPVSCNIMVAGYVKSGHLDNARRLFEIMPRKGCVSYTTMIMGLAQNECWTEA 148
Query: 77 -------------------------CSHMGGIWNCWMLNALVIKLHFVSHVLISTTLLYM 136
CSH+GGI NC ML+ LV+KL VL+ST LL+M
Sbjct: 149 IKVFKDMRSAGVIPNEVTMATVISTCSHLGGIRNCRMLHGLVVKLQLEGFVLVSTNLLHM 208
Query: 137 YCVCPSLKDARRFFYEMSVRNVASTWNKILKGYVKAGLVDEARELFESIAERD 155
YC C S+ + R F EMS RN+ S WN +L GY KAGLVD ARELF+ I +D
Sbjct: 209 YCGCSSVWEGRSLFNEMSERNIVS-WNVMLNGYAKAGLVDLARELFDKIHTKD 260
BLAST of Cp4.1LG17g01290 vs. TrEMBL
Match:
K7MAP7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G103100 PE=4 SV=1)
HSP 1 Score: 152.9 bits (385), Expect = 3.3e-34
Identity = 82/181 (45.30%), Postives = 104/181 (57.46%), Query Frame = 1
Query: 9 GSSTDGRLLFDSCSKLDSVCCNIMLCGYVKLRELDNARQLFDKMPDTGCVSFTTMILG-- 68
GS D +LLFD+C L+ + CNIM+CGY K +LDNAR+LFD MPD GCVS+TTMI+G
Sbjct: 122 GSIKDAQLLFDACPTLNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLV 181
Query: 69 ---------------------------------CSHMGGIWNCWMLNALVIKLHFVSHVL 128
CSH G I NC M++A+ IKL VL
Sbjct: 182 QNECFREALEVFKDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVL 241
Query: 129 ISTTLLYMYCVCPSLKDARRFFYEMSVRNVASTWNKILKGYVKAGLVDEARELFESIAER 155
+ST L+ YC+C + +ARR F M N+ S WN +L GY KAGLVD ARELFE + ++
Sbjct: 242 VSTNLMRAYCLCSGVGEARRLFDRMPEVNLVS-WNVMLNGYAKAGLVDMARELFERVPDK 301
BLAST of Cp4.1LG17g01290 vs. TrEMBL
Match:
A0A0B2RMH5_GLYSO (Pentatricopeptide repeat-containing protein, mitochondrial OS=Glycine soja GN=glysoja_010063 PE=4 SV=1)
HSP 1 Score: 152.9 bits (385), Expect = 3.3e-34
Identity = 82/181 (45.30%), Postives = 104/181 (57.46%), Query Frame = 1
Query: 9 GSSTDGRLLFDSCSKLDSVCCNIMLCGYVKLRELDNARQLFDKMPDTGCVSFTTMILG-- 68
GS D +LLFD+C L+ + CNIM+CGY K +LDNAR+LFD MPD GCVS+TTMI+G
Sbjct: 122 GSIKDAQLLFDACPTLNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLV 181
Query: 69 ---------------------------------CSHMGGIWNCWMLNALVIKLHFVSHVL 128
CSH G I NC M++A+ IKL VL
Sbjct: 182 QNECFREALEVFKDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVL 241
Query: 129 ISTTLLYMYCVCPSLKDARRFFYEMSVRNVASTWNKILKGYVKAGLVDEARELFESIAER 155
+ST L+ YC+C + +ARR F M N+ S WN +L GY KAGLVD ARELFE + ++
Sbjct: 242 VSTNLMRAYCLCSGVGEARRLFDRMPEVNLVS-WNVMLNGYAKAGLVDMARELFERVPDK 301
BLAST of Cp4.1LG17g01290 vs. TAIR10
Match:
AT5G19020.1 (AT5G19020.1 mitochondrial editing factor 18)
HSP 1 Score: 140.6 bits (353), Expect = 8.6e-34
Identity = 77/177 (43.50%), Postives = 100/177 (56.50%), Query Frame = 1
Query: 13 DGRLLFDSCSKLDSVCCNIMLCGYVKLRELDNARQLFDKMPDTGCVSFTTMILG------ 72
D +F +KLDS NIM+ GYV+ R L +A +LFD MP+ CVS+TT+I G
Sbjct: 94 DAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQ 153
Query: 73 -----------------------------CSHMGGIWNCWMLNALVIKLHFVSHVLISTT 132
CSH+GGIW+C ML +L IKL V +ST
Sbjct: 154 WSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTN 213
Query: 133 LLYMYCVCPSLKDARRFFYEMSVRNVASTWNKILKGYVKAGLVDEARELFESIAERD 155
LL+MYC+C LKDAR+ F EM RN+ TWN +L GY KAGL+++A ELF+ I E+D
Sbjct: 214 LLHMYCLCLCLKDARKLFDEMPERNLV-TWNVMLNGYSKAGLIEQAEELFDQITEKD 269
BLAST of Cp4.1LG17g01290 vs. TAIR10
Match:
AT5G08305.1 (AT5G08305.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 84.3 bits (207), Expect = 7.3e-17
Identity = 48/151 (31.79%), Postives = 79/151 (52.32%), Query Frame = 1
Query: 8 NGSSTDGRLLFDSCSKLDSVCCNIMLCGYVKLRELDNARQLFDKMPDTGC-----VSFTT 67
+G RL+FD S+ D V + M+ GYVK E + A ++FD+M G V+ +
Sbjct: 187 SGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVS 246
Query: 68 MILGCSHMGGIWNCWMLNALVIKLHFVSHVLISTTLLYMYCVCPSLKDARRFFYEMSVRN 127
+I C+H+G + ++ ++ +H V++ T+L+ MY C S+ DA FY SV+
Sbjct: 247 VICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKE 306
Query: 128 V-ASTWNKILKGYVKAGLVDEARELFESIAE 153
A WN I+ G G + E+ +LF + E
Sbjct: 307 TDALMWNAIIGGLASHGFIRESLQLFHKMRE 337
BLAST of Cp4.1LG17g01290 vs. TAIR10
Match:
AT4G02750.1 (AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 81.6 bits (200), Expect = 4.7e-16
Identity = 60/183 (32.79%), Postives = 88/183 (48.09%), Query Frame = 1
Query: 1 MIVGVKSNGSSTDGRLLFDSCSKLDSVCCNIMLCGYVKLRELDNARQLFDKMPDTGCVSF 60
MI G NG R LFD + D V N+M+ GYV+ R L AR+LF+ MP+ S+
Sbjct: 101 MISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSW 160
Query: 61 TTMILGCSHMGGI-----------------WNCW---------MLNALVIKLHFVSHVLI 120
TM+ G + G + WN M A ++ + L+
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALV 220
Query: 121 S-TTLLYMYCVCPSLKDARRFFYEMSVRNVASTWNKILKGYVKAGLVDEARELFESIAER 157
S LL + + +AR+FF M+VR+V S WN I+ GY ++G +DEAR+LF+ +
Sbjct: 221 SWNCLLGGFVKKKKIVEARQFFDSMNVRDVVS-WNTIITGYAQSGKIDEARQLFDESPVQ 280
BLAST of Cp4.1LG17g01290 vs. TAIR10
Match:
AT1G05750.1 (AT1G05750.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 75.1 bits (183), Expect = 4.4e-14
Identity = 56/188 (29.79%), Postives = 87/188 (46.28%), Query Frame = 1
Query: 2 IVGVKSN-GSSTDGRLLFDSCSKLDSVCCNIMLCGYVKLRELDNARQLFDKMPDTGCVSF 61
I+G+ S G RL+FD +SV N M+ GY++ ++DNA ++FDKMP+ +S+
Sbjct: 115 IIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISW 174
Query: 62 TTMILGCSHMGG-----IWNCWM---------------LNA---------------LVIK 121
T MI G G +W M LNA V+
Sbjct: 175 TAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLS 234
Query: 122 LHFVSHVLISTTLLYMYCVCPSLKDARRFFYEMSVRNVASTWNKILKGYVKAGLVDEARE 154
F ++V +S +L+ +YC C ++ AR+ FY M R V S WN ++ G+ G E+
Sbjct: 235 QDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVS-WNSVIVGFAANGNAHESLV 294
BLAST of Cp4.1LG17g01290 vs. TAIR10
Match:
AT4G22760.1 (AT4G22760.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 73.6 bits (179), Expect = 1.3e-13
Identity = 46/138 (33.33%), Postives = 76/138 (55.07%), Query Frame = 1
Query: 18 FDSCSKLDSVCCNIMLCGYVKLRELDNARQLFDKMPDTGCVSFTTMILGCSHMGGIWN-C 77
FD ++ ++V N +L GY++ ELD AR++FDK+P+ VS+ +I + G + N C
Sbjct: 162 FDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNAC 221
Query: 78 WMLNALVIKLHFVSHVLISTTLLYMYCVCPSLKDARRFFYEMSVRNVASTWNKILKGYVK 137
+ +A+ +K ++LI Y C +K AR +F M +N S W ++ GY K
Sbjct: 222 SLFSAMPLKSPASWNILIGG-----YVNCREMKLARTYFDAMPQKNGVS-WITMISGYTK 281
Query: 138 AGLVDEARELFESIAERD 155
G V A ELF ++++D
Sbjct: 282 LGDVQSAEELFRLMSKKD 293
BLAST of Cp4.1LG17g01290 vs. NCBI nr
Match:
gi|659117338|ref|XP_008458548.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucumis melo])
HSP 1 Score: 199.9 bits (507), Expect = 3.4e-48
Identity = 108/183 (59.02%), Postives = 122/183 (66.67%), Query Frame = 1
Query: 9 GSSTDGRLLFDSCSKLDSVCCNIMLCGYVKLRELDNARQLFDKMPDTGCVSFTTMILG-- 68
G + RLLFDSCS LDSV CNIM+ GY+KLR+L+NARQLF KMP+ GCVS+TTMILG
Sbjct: 110 GLLSSARLLFDSCSVLDSVSCNIMMSGYIKLRQLENARQLFAKMPERGCVSYTTMILGLA 169
Query: 69 ---------------------------------CSHMGGIWNCWMLNALVIKLHFVSHVL 128
CSH+GGIWNC ML+ALVIKLHF VL
Sbjct: 170 QNDCWGEAIEVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCCMLHALVIKLHFFGLVL 229
Query: 129 ISTTLLYMYCVCPSLKDARRFFYEMSVRNVASTWNKILKGYVKAGLVDEARELFESIAER 157
IST LL+MYCV SLKDA+R F EM VRN S WN +LKGYVK+GLVD+ARELFE I ER
Sbjct: 230 ISTNLLHMYCVFSSLKDAKRLFNEMPVRNTVS-WNVMLKGYVKSGLVDQARELFERIPER 289
BLAST of Cp4.1LG17g01290 vs. NCBI nr
Match:
gi|778714195|ref|XP_011657204.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X1 [Cucumis sativus])
HSP 1 Score: 198.4 bits (503), Expect = 9.8e-48
Identity = 108/183 (59.02%), Postives = 121/183 (66.12%), Query Frame = 1
Query: 9 GSSTDGRLLFDSCSKLDSVCCNIMLCGYVKLRELDNARQLFDKMPDTGCVSFTTMILG-- 68
G + RLLFDSCS LDSV CNIM+ GYVKLR+L+NARQLF KMP+ GCVS+TTMILG
Sbjct: 110 GLLSSARLLFDSCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLA 169
Query: 69 ---------------------------------CSHMGGIWNCWMLNALVIKLHFVSHVL 128
CSH+GGIWNC ML+ALVIKLHF VL
Sbjct: 170 QNDCWGEAIEVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVL 229
Query: 129 ISTTLLYMYCVCPSLKDARRFFYEMSVRNVASTWNKILKGYVKAGLVDEARELFESIAER 157
IST LL+MYCV SLKD +R F EM VRN S WN +LKGYVK+GLVD+ARELFE I ER
Sbjct: 230 ISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVS-WNVMLKGYVKSGLVDQARELFERIPER 289
BLAST of Cp4.1LG17g01290 vs. NCBI nr
Match:
gi|778714199|ref|XP_011657205.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X2 [Cucumis sativus])
HSP 1 Score: 197.6 bits (501), Expect = 1.7e-47
Identity = 107/177 (60.45%), Postives = 119/177 (67.23%), Query Frame = 1
Query: 15 RLLFDSCSKLDSVCCNIMLCGYVKLRELDNARQLFDKMPDTGCVSFTTMILG-------- 74
RLLFDSCS LDSV CNIM+ GYVKLR+L+NARQLF KMP+ GCVS+TTMILG
Sbjct: 93 RLLFDSCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWG 152
Query: 75 ---------------------------CSHMGGIWNCWMLNALVIKLHFVSHVLISTTLL 134
CSH+GGIWNC ML+ALVIKLHF VLIST LL
Sbjct: 153 EAIEVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLL 212
Query: 135 YMYCVCPSLKDARRFFYEMSVRNVASTWNKILKGYVKAGLVDEARELFESIAERDDF 157
+MYCV SLKD +R F EM VRN S WN +LKGYVK+GLVD+ARELFE I ERD F
Sbjct: 213 HMYCVFSSLKDTKRLFNEMPVRNTVS-WNVMLKGYVKSGLVDQARELFERIPERDVF 268
BLAST of Cp4.1LG17g01290 vs. NCBI nr
Match:
gi|703125953|ref|XP_010103436.1| (hypothetical protein L484_010038 [Morus notabilis])
HSP 1 Score: 166.0 bits (419), Expect = 5.4e-38
Identity = 90/181 (49.72%), Postives = 108/181 (59.67%), Query Frame = 1
Query: 9 GSSTDGRLLFDSCSKLDSVCCNIMLCGYVKLRELDNARQLFDKMPDTGCVSFTTMILG-- 68
G +D R LFDSCSKLD+V CNIM+ GYVK +LDNARQLF+ MP GC+S+TTMI+G
Sbjct: 116 GFISDARTLFDSCSKLDTVSCNIMVSGYVKSGQLDNARQLFEIMPGKGCISYTTMIMGLA 175
Query: 69 ---------------------------------CSHMGGIWNCWMLNALVIKLHFVSHVL 128
C H+GGIW+C ML+ LVIKL + V
Sbjct: 176 RNECWKEATQLFKDMRFEGIAPNQVMMASLISACVHIGGIWDCRMLHGLVIKLQLLGSVF 235
Query: 129 ISTTLLYMYCVCPSLKDARRFFYEMSVRNVASTWNKILKGYVKAGLVDEARELFESIAER 155
+ST LL MYC C SL DA+ F EM RN+ S WN +L G+ KAGLVD ARELFE I +
Sbjct: 236 VSTNLLNMYCACSSLGDAKTLFDEMPERNIVS-WNVMLNGFSKAGLVDLARELFERIPVK 295
BLAST of Cp4.1LG17g01290 vs. NCBI nr
Match:
gi|1009141608|ref|XP_015888285.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Ziziphus jujuba])
HSP 1 Score: 159.8 bits (403), Expect = 3.9e-36
Identity = 87/182 (47.80%), Postives = 108/182 (59.34%), Query Frame = 1
Query: 9 GSSTDGRLLFDSCSKLDSVCCNIMLCGYVKLRELDNARQLFDKMPDTGCVSFTTMILGCS 68
G D R LFDSCSK+D+V CNIM+ GYV+ EL+ AR LF+ MP+ GCVS+TTMI+G S
Sbjct: 104 GFLADARSLFDSCSKVDTVSCNIMVAGYVRFGELNKARNLFESMPEKGCVSYTTMIMGLS 163
Query: 69 ------------------------------------HMGGIWNCWMLNALVIKLHFVSHV 128
+ GGIW+C ML+ALVI+L V
Sbjct: 164 QNDYWAEAIEVFKDMRSAGVFPNEVTMASVISSCFHNKGGIWDCRMLHALVIRLLLHGFV 223
Query: 129 LISTTLLYMYCVCPSLKDARRFFYEMSVRNVASTWNKILKGYVKAGLVDEARELFESIAE 155
++ST LL+MYC C S+ DAR F EM RN+ S WN +L GY KAGLVD+ARELFE I
Sbjct: 224 IVSTNLLHMYCSCSSVWDARHLFDEMPERNIVS-WNVMLNGYSKAGLVDQARELFERIPS 283
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP394_ARATH | 1.5e-32 | 43.50 | Pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Arabidop... | [more] |
| PP369_ARATH | 1.3e-15 | 31.79 | Pentatricopeptide repeat-containing protein At5g08305 OS=Arabidopsis thaliana GN... | [more] |
| PP301_ARATH | 8.4e-15 | 32.79 | Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN... | [more] |
| PPR13_ARATH | 7.8e-13 | 29.79 | Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidop... | [more] |
| PP336_ARATH | 2.3e-12 | 33.33 | Pentatricopeptide repeat-containing protein At4g22760 OS=Arabidopsis thaliana GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KC16_CUCSA | 6.8e-48 | 59.02 | Uncharacterized protein OS=Cucumis sativus GN=Csa_6G239150 PE=4 SV=1 | [more] |
| W9RKN3_9ROSA | 3.8e-38 | 49.72 | Uncharacterized protein OS=Morus notabilis GN=L484_010038 PE=4 SV=1 | [more] |
| M5XIH8_PRUPE | 1.5e-34 | 49.13 | Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015699mg PE=4 S... | [more] |
| K7MAP7_SOYBN | 3.3e-34 | 45.30 | Uncharacterized protein OS=Glycine max GN=GLYMA_15G103100 PE=4 SV=1 | [more] |
| A0A0B2RMH5_GLYSO | 3.3e-34 | 45.30 | Pentatricopeptide repeat-containing protein, mitochondrial OS=Glycine soja GN=gl... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G19020.1 | 8.6e-34 | 43.50 | mitochondrial editing factor 18 | [more] |
| AT5G08305.1 | 7.3e-17 | 31.79 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G02750.1 | 4.7e-16 | 32.79 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G05750.1 | 4.4e-14 | 29.79 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G22760.1 | 1.3e-13 | 33.33 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
