Cp4.1LG17g00710 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG17g00710
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG17 : 165177 .. 165374 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGCTCTTTAGGGCAAAATCACGAGCATCAGGAGTTCACTTTGGTTTCGATTTCTAAGCTTCCTTCTTCGACTTCGACGTCTTCTTCGTCCACTTCGTCGACGCCGGTGGTTGCTCGATTCGGAGGCGAGTCCGGCGCGGCGGAGCTTCGGTTCCGGCAGGAGGCCGATTCCGATGACTTAGCNGGTCACTGA

mRNA sequence

ATGGAGGGCTCTTTAGGGCAAAATCACGAGCATCAGGAGTTCACTTTGGTTTCGATTTCTAAGCTTCCTTCTTCGACTTCGACGTCTTCTTCGTCCACTTCGTCGACGCCGGTGGTTGCTCGATTCGGAGGCGAGTCCGGCGCGGCGGAGCTTCGGTTCCGGCAGGAGGCCGATTCCGATGACTTAGCNGGTCACTGA

Coding sequence (CDS)

ATGGAGGGCTCTTTAGGGCAAAATCACGAGCATCAGGAGTTCACTTTGGTTTCGATTTCTAAGCTTCCTTCTTCGACTTCGACGTCTTCTTCGTCCACTTCGTCGACGCCGGTGGTTGCTCGATTCGGAGGCGAGTCCGGCGCGGCGGAGCTTCGGTTCCGGCAGGAGGCCGATTCCGATGACTTAGCNGGTCACTGA

Protein sequence

MEGSLGQNHEHQEFTLVSISKLPSSTSTSSSSTSSTPVVARFGGESGAAELRFRQEADSDDLAGH
Homology
[Close]
BLAST of Cp4.1LG17g00710 vs. TrEMBL
Match: A0A0A0KCB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G194130 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.4e-12
Identity = 47/63 (74.60%), Postives = 53/63 (84.13%), Query Frame = 1 

Query: 1  MEGSLGQNHEHQEFTLVSISKLPSSTSTSSSSTSSTPVVARFGGESGAAELRFRQEADSD 60
          ME SLGQ H+ QEFTLVSIS+L SS+S  SSS+SS+PVVARF  +SGAAELR RQE DSD
Sbjct: 1  MEDSLGQKHKPQEFTLVSISELASSSS--SSSSSSSPVVARFCSDSGAAELRLRQETDSD 60

Query: 61 DLA 64
          DLA
Sbjct: 61 DLA 61

[Close]
BLAST of Cp4.1LG17g00710 vs. TrEMBL
Match: A0A061EQ82_THECC (Arginine methyltransferase 4B isoform 2 OS=Theobroma cacao GN=TCM_021208 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-06
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 1 

Query: 1  MEGSLGQNHEHQEFTLVSISKLPSSTSTSSSSTSSTPVVARFGGESGAAELRFRQEADSD 60
          MEGS G  H+H EFTL ++S+L  S+S+ SSS+S TPV+ARF  + G AELRFRQ ++  
Sbjct: 2  MEGSAGLKHKHLEFTLAAVSEL--SSSSVSSSSSYTPVIARFSADGGVAELRFRQGSEFI 60

Query: 61 D 62
          D
Sbjct: 62 D 60

[Close]
BLAST of Cp4.1LG17g00710 vs. TrEMBL
Match: A0A061EPA8_THECC (Arginine methyltransferase 4B isoform 3 (Fragment) OS=Theobroma cacao GN=TCM_021208 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-06
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 1 

Query: 1  MEGSLGQNHEHQEFTLVSISKLPSSTSTSSSSTSSTPVVARFGGESGAAELRFRQEADSD 60
          MEGS G  H+H EFTL ++S+L  S+S+ SSS+S TPV+ARF  + G AELRFRQ ++  
Sbjct: 2  MEGSAGLKHKHLEFTLAAVSEL--SSSSVSSSSSYTPVIARFSADGGVAELRFRQGSEFI 60

Query: 61 D 62
          D
Sbjct: 62 D 60

[Close]
BLAST of Cp4.1LG17g00710 vs. TrEMBL
Match: A0A061ENT5_THECC (Arginine methyltransferase 4A isoform 1 OS=Theobroma cacao GN=TCM_021208 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-06
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 1 

Query: 1  MEGSLGQNHEHQEFTLVSISKLPSSTSTSSSSTSSTPVVARFGGESGAAELRFRQEADSD 60
          MEGS G  H+H EFTL ++S+L  S+S+ SSS+S TPV+ARF  + G AELRFRQ ++  
Sbjct: 2  MEGSAGLKHKHLEFTLAAVSEL--SSSSVSSSSSYTPVIARFSADGGVAELRFRQGSEFI 60

Query: 61 D 62
          D
Sbjct: 62 D 60

[Close]
BLAST of Cp4.1LG17g00710 vs. TrEMBL
Match: M5XEC3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003751mg PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 7.6e-06
Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 1 

Query: 1  MEGSLGQNHEHQEFTLVSISKLPSSTSTSSSSTSSTPVVARFGGESGAAELRFRQEADSD 60
          MEG  G+  + QEF L S+S+L SS    SSS+S TP VARF  E G  ELRF+QEA+SD
Sbjct: 1  MEGLKGEEAQKQEFVLASVSELASS----SSSSSLTPAVARFSAEDGVGELRFQQEAESD 56

[Close]
BLAST of Cp4.1LG17g00710 vs. NCBI nr
Match: gi|659117158|ref|XP_008458452.1| (PREDICTED: probable histone-arginine methyltransferase 1.4 [Cucumis melo])

HSP 1 Score: 81.3 bits (199), Expect = 7.1e-13
Identity = 48/63 (76.19%), Postives = 54/63 (85.71%), Query Frame = 1 

Query: 1  MEGSLGQNHEHQEFTLVSISKLPSSTSTSSSSTSSTPVVARFGGESGAAELRFRQEADSD 60
          ME SLGQ H+ QEFTLVSIS+L SS+S  SSS+SS+PVVARF G+SGAAELR RQE DSD
Sbjct: 1  MEDSLGQKHKPQEFTLVSISELASSSS--SSSSSSSPVVARFCGDSGAAELRLRQETDSD 60

Query: 61 DLA 64
          DLA
Sbjct: 61 DLA 61

[Close]
BLAST of Cp4.1LG17g00710 vs. NCBI nr
Match: gi|449450682|ref|XP_004143091.1| (PREDICTED: probable histone-arginine methyltransferase 1.4 [Cucumis sativus])

HSP 1 Score: 79.0 bits (193), Expect = 3.5e-12
Identity = 47/63 (74.60%), Postives = 53/63 (84.13%), Query Frame = 1 

Query: 1  MEGSLGQNHEHQEFTLVSISKLPSSTSTSSSSTSSTPVVARFGGESGAAELRFRQEADSD 60
          ME SLGQ H+ QEFTLVSIS+L SS+S  SSS+SS+PVVARF  +SGAAELR RQE DSD
Sbjct: 1  MEDSLGQKHKPQEFTLVSISELASSSS--SSSSSSSPVVARFCSDSGAAELRLRQETDSD 60

Query: 61 DLA 64
          DLA
Sbjct: 61 DLA 61

[Close]
BLAST of Cp4.1LG17g00710 vs. NCBI nr
Match: gi|700191974|gb|KGN47178.1| (hypothetical protein Csa_6G194130 [Cucumis sativus])

HSP 1 Score: 79.0 bits (193), Expect = 3.5e-12
Identity = 47/63 (74.60%), Postives = 53/63 (84.13%), Query Frame = 1 

Query: 1  MEGSLGQNHEHQEFTLVSISKLPSSTSTSSSSTSSTPVVARFGGESGAAELRFRQEADSD 60
          ME SLGQ H+ QEFTLVSIS+L SS+S  SSS+SS+PVVARF  +SGAAELR RQE DSD
Sbjct: 1  MEDSLGQKHKPQEFTLVSISELASSSS--SSSSSSSPVVARFCSDSGAAELRLRQETDSD 60

Query: 61 DLA 64
          DLA
Sbjct: 61 DLA 61

[Close]
BLAST of Cp4.1LG17g00710 vs. NCBI nr
Match: gi|590661121|ref|XP_007035586.1| (Arginine methyltransferase 4B isoform 2 [Theobroma cacao])

HSP 1 Score: 59.3 bits (142), Expect = 2.9e-06
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 1 

Query: 1  MEGSLGQNHEHQEFTLVSISKLPSSTSTSSSSTSSTPVVARFGGESGAAELRFRQEADSD 60
          MEGS G  H+H EFTL ++S+L  S+S+ SSS+S TPV+ARF  + G AELRFRQ ++  
Sbjct: 2  MEGSAGLKHKHLEFTLAAVSEL--SSSSVSSSSSYTPVIARFSADGGVAELRFRQGSEFI 60

Query: 61 D 62
          D
Sbjct: 62 D 60

[Close]
BLAST of Cp4.1LG17g00710 vs. NCBI nr
Match: gi|590661124|ref|XP_007035587.1| (Arginine methyltransferase 4B isoform 3, partial [Theobroma cacao])

HSP 1 Score: 59.3 bits (142), Expect = 2.9e-06
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 1 

Query: 1  MEGSLGQNHEHQEFTLVSISKLPSSTSTSSSSTSSTPVVARFGGESGAAELRFRQEADSD 60
          MEGS G  H+H EFTL ++S+L  S+S+ SSS+S TPV+ARF  + G AELRFRQ ++  
Sbjct: 2  MEGSAGLKHKHLEFTLAAVSEL--SSSSVSSSSSYTPVIARFSADGGVAELRFRQGSEFI 60

Query: 61 D 62
          D
Sbjct: 62 D 60

The following BLAST results are available for this feature:
BLAST of Cp4.1LG17g00710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG17g00710 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCB9_CUCSA2.4e-1274.60Uncharacterized protein OS=Cucumis sativus GN=Csa_6G194130 PE=3 SV=1[more]
A0A061EQ82_THECC2.0e-0655.74Arginine methyltransferase 4B isoform 2 OS=Theobroma cacao GN=TCM_021208 PE=3 SV... [more]
A0A061EPA8_THECC2.0e-0655.74Arginine methyltransferase 4B isoform 3 (Fragment) OS=Theobroma cacao GN=TCM_021... [more]
A0A061ENT5_THECC2.0e-0655.74Arginine methyltransferase 4A isoform 1 OS=Theobroma cacao GN=TCM_021208 PE=3 SV... [more]
M5XEC3_PRUPE7.6e-0656.67Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003751mg PE=3 SV=1[more]
BLAST of Cp4.1LG17g00710 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG17g00710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659117158|ref|XP_008458452.1|7.1e-1376.19PREDICTED: probable histone-arginine methyltransferase 1.4 [Cucumis melo][more]
gi|449450682|ref|XP_004143091.1|3.5e-1274.60PREDICTED: probable histone-arginine methyltransferase 1.4 [Cucumis sativus][more]
gi|700191974|gb|KGN47178.1|3.5e-1274.60hypothetical protein Csa_6G194130 [Cucumis sativus][more]
gi|590661121|ref|XP_007035586.1|2.9e-0655.74Arginine methyltransferase 4B isoform 2 [Theobroma cacao][more]
gi|590661124|ref|XP_007035587.1|2.9e-0655.74Arginine methyltransferase 4B isoform 3, partial [Theobroma cacao][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0034969 histone arginine methylation
biological_process GO:0006479 protein methylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0008469 histone-arginine N-methyltransferase activity
molecular_function GO:0008168 methyltransferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g00710.1Cp4.1LG17g00710.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG17g00710MELO3C021330.2Melon (DHL92) v3.6.1cpemedB331
Cp4.1LG17g00710CsaV3_6G017170Cucumber (Chinese Long) v3cpecucB0407
Cp4.1LG17g00710Bhi12G001824Wax gourdcpewgoB0390
Cp4.1LG17g00710CsGy6G014600Cucumber (Gy14) v2cgybcpeB787
Cp4.1LG17g00710Carg05503Silver-seed gourdcarcpeB0102
Cp4.1LG17g00710Carg18843Silver-seed gourdcarcpeB0985
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG17g00710Cp4.1LG12g02710Cucurbita pepo (Zucchini)cpecpeB158
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG17g00710Cucumber (Chinese Long) v3cpecucB0376
Cp4.1LG17g00710Cucumber (Chinese Long) v3cpecucB0379
Cp4.1LG17g00710Wax gourdcpewgoB0398
Cp4.1LG17g00710Cucurbita pepo (Zucchini)cpecpeB337
Cp4.1LG17g00710Cucurbita pepo (Zucchini)cpecpeB343
Cp4.1LG17g00710Cucumber (Gy14) v1cgycpeB0474
Cp4.1LG17g00710Cucumber (Gy14) v1cgycpeB0678
Cp4.1LG17g00710Cucurbita maxima (Rimu)cmacpeB270
Cp4.1LG17g00710Cucurbita maxima (Rimu)cmacpeB377
Cp4.1LG17g00710Cucurbita maxima (Rimu)cmacpeB822
Cp4.1LG17g00710Cucurbita maxima (Rimu)cmacpeB915
Cp4.1LG17g00710Cucurbita moschata (Rifu)cmocpeB233
Cp4.1LG17g00710Cucurbita moschata (Rifu)cmocpeB340
Cp4.1LG17g00710Cucurbita moschata (Rifu)cmocpeB776
Cp4.1LG17g00710Cucurbita moschata (Rifu)cmocpeB852
Cp4.1LG17g00710Wild cucumber (PI 183967)cpecpiB327
Cp4.1LG17g00710Wild cucumber (PI 183967)cpecpiB307
Cp4.1LG17g00710Cucumber (Chinese Long) v2cpecuB326
Cp4.1LG17g00710Cucumber (Chinese Long) v2cpecuB307
Cp4.1LG17g00710Bottle gourd (USVL1VR-Ls)cpelsiB247
Cp4.1LG17g00710Bottle gourd (USVL1VR-Ls)cpelsiB268
Cp4.1LG17g00710Watermelon (Charleston Gray)cpewcgB291
Cp4.1LG17g00710Watermelon (Charleston Gray)cpewcgB297
Cp4.1LG17g00710Watermelon (97103) v1cpewmB329
Cp4.1LG17g00710Watermelon (97103) v1cpewmB340
Cp4.1LG17g00710Melon (DHL92) v3.5.1cpemeB283
Cp4.1LG17g00710Melon (DHL92) v3.5.1cpemeB314
Cp4.1LG17g00710Cucumber (Gy14) v2cgybcpeB202
Cp4.1LG17g00710Cucumber (Gy14) v2cgybcpeB348
Cp4.1LG17g00710Melon (DHL92) v3.6.1cpemedB368
Cp4.1LG17g00710Silver-seed gourdcarcpeB0859