Cp4.1LG16g09320 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG16g09320
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ubiquitin-conjugating enzyme E2, putative
Location	Cp4.1LG16 : 8550954 .. 8555108 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGCGTTGTAATTTGGAAGTATAATCACCCTCCATCAAACTCAATGTAAGTCGTGCAATTGGGGAAATTTATAATCAAATGGTCAGGTTTGGTTCCCAAAATCTGAATCCAATGGTGGGAAATCGCGACCACCGCCCGCAACAGCCTCTGTTTGGTGGGGGGAGATCGTCTTCGTCGACGTCCTTAGCGCCTCCAACTTCATGGGCGTCCACAACCTCCGTTTCTGCTTCAGGGAAGAGAATTCAAAGAGAAATGACTGAGTTTAACTTGGACCCACCTTCCGATTGCTCCGCCGGGCCAAAGGGCGACAATCTTTACCACTGGTTCGCTACCATCTTTGGCCCTCCTGGTAGGTACCCTTTAGGGATTCGTACTTCTTTGTTTCAATTCCTGAACAGATGCTCACTAAAACCCTGATGGGGTTTCATTTCCTGACTGCTAAGGATGTTTTATTTACAATTCTAAAGAAAGTGATTAGGGAAGAAGATGCTCACTGTTTAGCTTGAGGAACTTTTACCAAAAACTAAATTTATTTGTTTTGGATCATATGAAGGCTGTGTATGAACACTATCTCCAATAAATCAGGACAAATTTCTGGTAATCTTGACTTGTGTCTGTGTTGTTTAATAGGAACACCATATGAAGGTGGCATATTTTTCCTGGACATAATTTTTCCAAGTGATTATCCATTCAATCCTCCAAAGGTACTCTTCTCCCCCACATCCTTCAACTTGATGCTCATTCTTGATCGATGCTACACTGTTTCAAGTTGGTTATTTATTAAGAAGGATCAGGTGTGCAGGTTGTATTTAAAACCCGAATCTACCACTGCAATGTCGATTCCTCCGGTAACGTAAGTTTGGACATTTTGAAGGATAGCTGGAGTCCTGCGTTAACAATTGCAAAGGTGTTAATTGCAGTGAAATCAATTTTTACAAACCCCAACCCTTGTGAGTTCCCTCACTTTCTGGACTCATTGTTTATGTCACTTTATGCTTCTTCTCGTTTACTTCATATGCCTTTCTGTTTCAACTGCTTTTCTTTCATTTGGAATGCATTGTCCTTTGTGTCTTTAAGAACCGGGAGTGTAAACGAAGGGATAGACCAGATATATGTTCGGTTAGGTTCGGTTTTCACAGAGAGGGACTCTGTGATTGTTGAAAGGCATTTACTAGGAATGGGAGCTATTCTCCATGAATGTATGCAGACTATGGAGGGAGATGGTTTGTTTATATCAGTATAAAAGTTTCTAGTTACAATGATTGCCGGTGGGATGAATATTGTGAGATCTCACATCGGTTGGAGGGGGGAACGGAGTATTTCTTTATAAGGATATGAAAAACTGTCCTTAGTAAAGCGTTTTAAAAACCTTAAGGAGAAGTTCAAAGAGGACAATATGTGCTATGTTACAAATATGTTGTGAAAAAAGTACATAGAGAGGTTCGATGATCACAGAAATGGTTGGTCTGTTTTAGATTTAAATAAAATGAGAAGGAAGAGAAGATTGAGGAAGCAATGGCAGTGTGCTAACTGTGTTCTATTCAACTAATTGATGGCAAGTTCGAAGTCCCAGTTCATTTTGGATTCTCCTAATGTTGCAGATGATCCAAATGCACCTGGTGTTGCTCACTTGTACTTGGCAGACAGAGCTAAACACGACGAGATAGCTGCTGAGTGGACGCTACGTTTTGCAAAGTGAATGGAACCTCAAACAAGCAACAGTGATGGATATGATTTTGGCAAGGAGTTATGAAGAACAGTGGAAAGCAAATGTAGAGACGAGGACATGGAATGGAATACTACAACTGTGGATATTATGAATGATTTGTAGTAGCCCCTTTGGAATTTAGGTGTCTGTCATATGCGTATGTAATATAGTGTTCTCTTGTGATGATTCGGAAGGATTCTATAGCTATCAAGTTTTGTATTTATGACTAAGTTGAGATTTGAATACCAAAAAACTGATATCTTCATTGGTCAGCTCCTCTCTTCTCAGTTTGATATCATAAATTCTTAAGAAGCGTGGCTGATCAAAAGCCACTCCTTGAAAACTACTGCAAATTGTTAAGAATGAGAAATAGAAATAGAATTGGGATCGAAAGTATGATCTTCATTCAGGTTTACCACGTTTATATAGGATACAAACTATCAACTAATACCTAAAAATAGAAAAAAATATATATCTAACTAAATCTGGTAAATAAATAAAATATACCGTTAATCAAATCTATACTAACAACTCCCTAAATATCTGAGATATATTCTAACTAATTATCACCGCAAAATATCCTCTTAATACTCCCCCTCAAGTTGGAGAGTTTGATATCATAAATTCTTAAGAAGCGTGGCTGATCAAAAGCCACTCCTTGAAAACTACTGCAAATGAACAGAGGGATGGTTCAGAGTGTGAAGATGGAGTGTAAAGAGTGTAAATAAACGTAGATGAAAACATCAGACCCTGCAGAGGGGTTTGGCGTGAGCTCATGGCGGCTGGAACTGGAGCGNGGCTGATCAAAAGCCACTCCTTGAAAACTACTGCAAATGAACATGGATGGTTCAGAGTGTGAAGATGGAGTGTAAATAAACGTAGATGAAAACATCAGACCCTGCAGAGGGGTTTGGCGTGAGATCATGGCGGCTGGAACTGGAGCGCATATGCGACCATGTGGATGATGCGACCATGTGGATGATGCGACCATGTGGATGAGACCATATTACTGCAAATGCCTGCACTCGGTAGCTGTTTGGAATTTATTATGTACATAGTCGGTAGCTGTATAATATAATGTAAATGTCCATTTCCAAACTTAGGACAAAATTACAATAATGCCCCCACATTGGATATTTTCCACAAATCACACCTCTACACAGCATCCCGATTGAACGTACCCACTGTACTCTTCTGGAACATTAATTTTGGTCATTTTACTATTTTCCCCTTCCTCCCTTTCCATCACATAGAAATTCTGCGCCGCCCCTTGGTACTCCGACCCCGTCACCACAGTTTGGGATCCGATCACCACCCCGCAGGTTCCGACTTGGAACGCAGCCTCCCATTCCGACCAGTTCGTCAGTCTTCCCTCTTTGTCCATTCCGACGCATGCCCGCGGGCACCTCCCCGTCTCCCATGCCCGATCCACAACGCGCCACTCGCCGGAATCGAGGTCGTACACTTCGGCGCTGGCGTCGAACATTCCCTGCCGCTCTGTGTCGTAGCCGCTAATCACCCAGAACTCGCCGCCGGCCATCAGCCCTTCGCACTCGTCCCTCCCCTGACTCATTTGGGGCAACTCGGTCCACTCGTCGCTTCTCAGATCGTAAACCCAGGCCGATTTCAAGGCGTTCTTGCTCTCGTCGTGGCCACCGGCGACGTAGATTCGTCCATCGGAAGCCCCTATTGCAAAAAAGGAGCGGTTAGAAGGCATATCTTTCCCCTTCCTCCAGCCACATCTGGTGAAATCGTAAACGAAAACATCAACAATGGGATCGTAGGTCTCTGGGTCCCAGCCGCCCATGAGCACCAATTTGCCTTCCGTGCTGGCTATGTGGCAGAACAAAGGGAGGCCATCTGGGTAGTGGGGAATCGGAGGGATTCGGTCCCAGGATTGAGTGAGTGGGTCGAAAAGGGTGAGTCCGTAAGCGAGGGAGGTGCAGAGCTTCCATCCGGTGGTGGAATAGGTTGGGGGAAGAGTCTGAACGAAGCAGGAGAGAAGACGGGTGGCGCCGGAGTTTCGGCGGTGGTAATAGAAATGCGAGCTGGAGATGAGTTGGCGCCAACGGCGGCAGACGGCGGAGGCGAGGCGGTGAGTGGTGTAAGGCAAACGAGTGATGCAGTCGAGACCGAGTTCGTCGGGGAGACCGGGAATCAAGTGGAAGGTTTCCATTGTAAGACGAAGAGAGAGTTTGATAATACTACGTTGGATTACGCTCCCATTTATACAAACCACCACTCCGACAATCAATCTTTTATTTTTTATTTATTTTTCCCTCTCTCGGTCTCTGTCTCTCTGTCTCTCTGTCTCTATCTCTATCAAATTTTCCACGTGTCAATGTCAGCGATGGATCACTTTCACAAATAAAACTTTCTTTTGTTTTCTGTGGGGTCTTCATAGAATTGGTTTCGTCCCAGCGATGGCAATGGGTTTGGGTCTGTG

mRNA sequence

AAGGCGTTGTAATTTGGAAGTATAATCACCCTCCATCAAACTCAATGTAAGTCGTGCAATTGGGGAAATTTATAATCAAATGGTCAGGTTTGGTTCCCAAAATCTGAATCCAATGGTGGGAAATCGCGACCACCGCCCGCAACAGCCTCTGTTTGGTGGGGGGAGATCGTCTTCGTCGACGTCCTTAGCGCCTCCAACTTCATGGGCGTCCACAACCTCCGTTTCTGCTTCAGGGAAGAGAATTCAAAGAGAAATGACTGAGTTTAACTTGGACCCACCTTCCGATTGCTCCGCCGGGCCAAAGGGCGACAATCTTTACCACTGGTTCGCTACCATCTTTGGCCCTCCTGGAACACCATATGAAGGTGGCATATTTTTCCTGGACATAATTTTTCCAAGTGATTATCCATTCAATCCTCCAAAGGTTGTATTTAAAACCCGAATCTACCACTGCAATGTCGATTCCTCCGGTAACGTAAGTTTGGACATTTTGAAGGATAGCTGGAGTCCTGCGTTAACAATTGCAAAGGTGTTAATTGCAGTGAAATCAATTTTTACAAACCCCAACCCTTATGATCCAAATGCACCTGGTGTTGCTCACTTGTACTTGGCAGACAGAGCTAAACACGACGAGATAGCTGCTGAGTGGACGCTACGTTTTGCAAAGTGAATGGAACCTCAAACAAGCAACAGTGATGGATATGATTTTGGCAAGGAGTTATGAAGAACAGTGGAAAGCAAATGTAGAGACGAGGACATGGAATGGAATACTACAACTGTGGATATTATGAATGATTTGTAGTAGCCCCTTTGGAATTTAGGTGTCTGTCATATGCGTATGTAATATAGTGTTCTCTTGTGATGATTCGGAAGGATTCTATAGCTATCAAGTTTTGTATTTATGACTAAGTTGAGATTTGAATACCAAAAAACTGATATCTTCATTGGTCAGCTCCTCTCTTCTCAGTTTGATATCATAAATTCTTAAGAAGCGTGGCTGATCAAAAGCCACTCCTTGAAAACTACTGCAAATTGTTAAGAATGAGAAATAGAAATAGAATTGGGATCGAAAGTATGATCTTCATTCAGGTTTACCACGTTTATATAGGATACAAACTATCAACTAATACCTAAAAATAGAAAAAAATATATATCTAACTAAATCTGGTAAATAAATAAAATATACCGTTAATCAAATCTATACTAACAACTCCCTAAATATCTGAGATATATTCTAACTAATTATCACCGCAAAATATCCTCTTAATACTCCCCCTCAAGTTGGAGAGTTTGATATCATAAATTCTTAAGAAGCGTGGCTGATCAAAAGCCACTCCTTGAAAACTACTGCAAATGAACAGAGGGATGGTTCAGAGTGTGAAGATGGAGTGTAAAGAGTGTAAATAAACGTAGATGAAAACATCAGACCCTGCAGAGGGGTTTGGCGTGAGCTCATGGCGGCTGGAACTGGAGCGNGGCTGATCAAAAGCCACTCCTTGAAAACTACTGCAAATGAACATGGATGGTTCAGAGTGTGAAGATGGAGTGTAAATAAACGTAGATGAAAACATCAGACCCTGCAGAGGGGTTTGGCGTGAGATCATGGCGGCTGGAACTGGAGCGCATATGCGACCATGTGGATGATGCGACCATGTGGATGATGCGACCATGTGGATGAGACCATATTACTGCAAATGCCTGCACTCGGTAGCTGTTTGGAATTTATTATGTACATAGTCGGTAGCTGTATAATATAATGTAAATGTCCATTTCCAAACTTAGGACAAAATTACAATAATGCCCCCACATTGGATATTTTCCACAAATCACACCTCTACACAGCATCCCGATTGAACGTACCCACTGTACTCTTCTGGAACATTAATTTTGGTCATTTTACTATTTTCCCCTTCCTCCCTTTCCATCACATAGAAATTCTGCGCCGCCCCTTGGTACTCCGACCCCGTCACCACAGTTTGGGATCCGATCACCACCCCGCAGGTTCCGACTTGGAACGCAGCCTCCCATTCCGACCAGTTCGTCAGTCTTCCCTCTTTGTCCATTCCGACGCATGCCCGCGGGCACCTCCCCGTCTCCCATGCCCGATCCACAACGCGCCACTCGCCGGAATCGAGGTCGTACACTTCGGCGCTGGCGTCGAACATTCCCTGCCGCTCTGTGTCGTAGCCGCTAATCACCCAGAACTCGCCGCCGGCCATCAGCCCTTCGCACTCGTCCCTCCCCTGACTCATTTGGGGCAACTCGGTCCACTCGTCGCTTCTCAGATCGTAAACCCAGGCCGATTTCAAGGCGTTCTTGCTCTCGTCGTGGCCACCGGCGACGTAGATTCGTCCATCGGAAGCCCCTATTGCAAAAAAGGAGCGGTTAGAAGGCATATCTTTCCCCTTCCTCCAGCCACATCTGGTGAAATCGTAAACGAAAACATCAACAATGGGATCGTAGGTCTCTGGGTCCCAGCCGCCCATGAGCACCAATTTGCCTTCCGTGCTGGCTATGTGGCAGAACAAAGGGAGGCCATCTGGGTAGTGGGGAATCGGAGGGATTCGGTCCCAGGATTGAGTGAGTGGGTCGAAAAGGGTGAGTCCGTAAGCGAGGGAGGTGCAGAGCTTCCATCCGGTGGTGGAATAGGTTGGGGGAAGAGTCTGAACGAAGCAGGAGAGAAGACGGGTGGCGCCGGAGTTTCGGCGGTGGTAATAGAAATGCGAGCTGGAGATGAGTTGGCGCCAACGGCGGCAGACGGCGGAGGCGAGGCGGTGAGTGGTGTAAGGCAAACGAGTGATGCAGTCGAGACCGAGTTCGTCGGGGAGACCGGGAATCAAGTGGAAGGTTTCCATTGTAAGACGAAGAGAGAGTTTGATAATACTACGTTGGATTACGCTCCCATTTATACAAACCACCACTCCGACAATCAATCTTTTATTTTTTATTTATTTTTCCCTCTCTCGGTCTCTGTCTCTCTGTCTCTCTGTCTCTATCTCTATCAAATTTTCCACGTGTCAATGTCAGCGATGGATCACTTTCACAAATAAAACTTTCTTTTGTTTTCTGTGGGGTCTTCATAGAATTGGTTTCGTCCCAGCGATGGCAATGGGTTTGGGTCTGTG

Coding sequence (CDS)

ATGGTCAGGTTTGGTTCCCAAAATCTGAATCCAATGGTGGGAAATCGCGACCACCGCCCGCAACAGCCTCTGTTTGGTGGGGGGAGATCGTCTTCGTCGACGTCCTTAGCGCCTCCAACTTCATGGGCGTCCACAACCTCCGTTTCTGCTTCAGGGAAGAGAATTCAAAGAGAAATGACTGAGTTTAACTTGGACCCACCTTCCGATTGCTCCGCCGGGCCAAAGGGCGACAATCTTTACCACTGGTTCGCTACCATCTTTGGCCCTCCTGGAACACCATATGAAGGTGGCATATTTTTCCTGGACATAATTTTTCCAAGTGATTATCCATTCAATCCTCCAAAGGTTGTATTTAAAACCCGAATCTACCACTGCAATGTCGATTCCTCCGGTAACGTAAGTTTGGACATTTTGAAGGATAGCTGGAGTCCTGCGTTAACAATTGCAAAGGTGTTAATTGCAGTGAAATCAATTTTTACAAACCCCAACCCTTATGATCCAAATGCACCTGGTGTTGCTCACTTGTACTTGGCAGACAGAGCTAAACACGACGAGATAGCTGCTGAGTGGACGCTACGTTTTGCAAAGTGA

Protein sequence

MVRFGSQNLNPMVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFAK

Homology

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BLAST of Cp4.1LG16g09320 vs. Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 3.8e-70
Identity = 120/157 (76.43%), Postives = 135/157 (85.99%), Query Frame = 1


Query: 40  TSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPPGTPYEGGIF 99
           +SW + TSVSASGKRIQREM E N+DPP DCSAGPKGDNLYHW ATI GP GTPYEGGIF
Sbjct: 26  SSWVAKTSVSASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIF 85

Query: 100 FLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNVSLDILKDSWSPALTIAKVLIAVKSIF 159
           FLDIIFPSDYPF PPK+VFKTRIYHCNVD++G++S++IL+DSWSPALTI KVL A++SIF
Sbjct: 86  FLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIF 145

Query: 160 TNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFAK 197
             P PY P  P +A LYL DR KHDE+A EWTLRFAK
Sbjct: 146 LKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFAK 182

[Close]

BLAST of Cp4.1LG16g09320 vs. Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 5.0e-54
Identity = 102/182 (56.04%), Postives = 130/182 (71.43%), Query Frame = 1


Query: 16  RDHRPQQPLFGGGRSSSSTSLAPPTSWASTTS--VSASGKRIQREMTEFNLDPPSDCSAG 75
           RD    +P     R  S+T     T  +S T+  +S S KRIQ+E+ E  LDPP +CSAG
Sbjct: 25  RDPAAPEPEEQEERKPSATQQKKNTKLSSKTTAKLSTSAKRIQKELAEITLDPPPNCSAG 84

Query: 76  PKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNV 135
           PKGDN+Y W +TI GPPG+ YEGG+FFLDI F SDYPF PPKV F+TRIYHCN++S G +
Sbjct: 85  PKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVI 144

Query: 136 SLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLR 195
            LDILKD+WSPALTI+KVL+++ S+ T+ NP DP    +A  YL +RA+HD IA +WT R
Sbjct: 145 CLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKR 204

[Close]

BLAST of Cp4.1LG16g09320 vs. Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 5.0e-54
Identity = 102/182 (56.04%), Postives = 130/182 (71.43%), Query Frame = 1


Query: 16  RDHRPQQPLFGGGRSSSSTSLAPPTSWASTTS--VSASGKRIQREMTEFNLDPPSDCSAG 75
           RD    +P     R  S+T     T  +S T+  +S S KRIQ+E+ E  LDPP +CSAG
Sbjct: 25  RDPAAPEPEEQEERKPSATQQKKNTKLSSKTTAKLSTSAKRIQKELAEITLDPPPNCSAG 84

Query: 76  PKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNV 135
           PKGDN+Y W +TI GPPG+ YEGG+FFLDI F SDYPF PPKV F+TRIYHCN++S G +
Sbjct: 85  PKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVI 144

Query: 136 SLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLR 195
            LDILKD+WSPALTI+KVL+++ S+ T+ NP DP    +A  YL +RA+HD IA +WT R
Sbjct: 145 CLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKR 204

[Close]

BLAST of Cp4.1LG16g09320 vs. Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2)

HSP 1 Score: 212.2 bits (539), Expect = 5.0e-54
Identity = 102/182 (56.04%), Postives = 130/182 (71.43%), Query Frame = 1


Query: 16  RDHRPQQPLFGGGRSSSSTSLAPPTSWASTTS--VSASGKRIQREMTEFNLDPPSDCSAG 75
           RD    +P     R  S+T     T  +S T+  +S S KRIQ+E+ E  LDPP +CSAG
Sbjct: 25  RDPAAPEPEEQEERKPSATQQKKNTKLSSKTTAKLSTSAKRIQKELAEITLDPPPNCSAG 84

Query: 76  PKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNV 135
           PKGDN+Y W +TI GPPG+ YEGG+FFLDI F SDYPF PPKV F+TRIYHCN++S G +
Sbjct: 85  PKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVI 144

Query: 136 SLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLR 195
            LDILKD+WSPALTI+KVL+++ S+ T+ NP DP    +A  YL +RA+HD IA +WT R
Sbjct: 145 CLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKR 204

[Close]

BLAST of Cp4.1LG16g09320 vs. Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.2e-52
Identity = 97/179 (54.19%), Postives = 125/179 (69.83%), Query Frame = 1


Query: 17  DHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKG 76
           D    QP    G+ SS T+            +S S KRIQ+E+ E  LDPP +CSAGPKG
Sbjct: 32  DREQVQPKKKEGKISSKTA----------AKLSTSAKRIQKELAEITLDPPPNCSAGPKG 91

Query: 77  DNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNVSLD 136
           DN+Y W +TI GPPG+ YEGG+FFLDI F  DYPF PPKV F+TRIYHCN++S G + LD
Sbjct: 92  DNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLD 151

Query: 137 ILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFA 196
           ILKD+WSPALTI+KVL+++ S+ T+ NP DP    +A  Y+ +RA+HD +A +WT R+A
Sbjct: 152 ILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 200

[Close]

BLAST of Cp4.1LG16g09320 vs. TrEMBL
Match: A0A0A0KWU2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280420 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 5.1e-98
Identity = 175/185 (94.59%), Postives = 177/185 (95.68%), Query Frame = 1


Query: 12  MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 71
           MVGNRDHRP  P  GGGRSSSS SLA PTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 1   MVGNRDHRPPLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60

Query: 72  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG 131
           AGPKGDNLYHWFATIFGP GTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDS+G
Sbjct: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120

Query: 132 NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 191
           NVSLDILKD+WSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFANPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180

Query: 192 LRFAK 197
           LRFAK
Sbjct: 181 LRFAK 185

[Close]

BLAST of Cp4.1LG16g09320 vs. TrEMBL
Match: B9GL37_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s10830g PE=4 SV=2)

HSP 1 Score: 293.1 bits (749), Expect = 2.5e-76
Identity = 134/171 (78.36%), Postives = 153/171 (89.47%), Query Frame = 1


Query: 26  GGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFAT 85
           GGG S+++TS     SW S +SVS SGKRIQREMTE N+DPP DCSAGPKGDNLYHW +T
Sbjct: 12  GGGSSATATS-----SWVSPSSVSTSGKRIQREMTELNMDPPPDCSAGPKGDNLYHWIST 71

Query: 86  IFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNVSLDILKDSWSPA 145
           + GPPGTPY+GGIFFLD+ FPSDYPF PPKVVFKTRIYHCNVDS+GN+SLDILKDSWSPA
Sbjct: 72  VIGPPGTPYQGGIFFLDLTFPSDYPFKPPKVVFKTRIYHCNVDSAGNLSLDILKDSWSPA 131

Query: 146 LTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFAK 197
           LTI KVL+A++SIFT+P+PY+P  PG+AHLYLADRAKHDE+AAEWTLRFAK
Sbjct: 132 LTITKVLLAIRSIFTHPDPYNPLVPGIAHLYLADRAKHDELAAEWTLRFAK 177

[Close]

BLAST of Cp4.1LG16g09320 vs. TrEMBL
Match: A0A061GS19_THECC (Ubiquitin-conjugating enzyme family protein isoform 1 OS=Theobroma cacao GN=TCM_040041 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.2e-76
Identity = 137/175 (78.29%), Postives = 153/175 (87.43%), Query Frame = 1


Query: 24  LFGGGRSSSS--TSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYH 83
           + GGGRSSSS  T+ A   +W STTSVS SGKRIQREM+E N+DPP  CSAGPKGDNLYH
Sbjct: 2   MIGGGRSSSSSTTATAAGGTWVSTTSVSTSGKRIQREMSELNVDPPPHCSAGPKGDNLYH 61

Query: 84  WFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNVSLDILKDS 143
           W ATI GPPGTPY+GGIFFLDI FPSDYPF PPKVVFKTRIYHCNVD++GN+SLDILKDS
Sbjct: 62  WVATIIGPPGTPYQGGIFFLDITFPSDYPFKPPKVVFKTRIYHCNVDAAGNLSLDILKDS 121

Query: 144 WSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFAK 197
           WSPALT+ KVL A+KSIFTNP+PY+P+  G+A LYL D+AKHDEIAAEWTLRFAK
Sbjct: 122 WSPALTVTKVLTAIKSIFTNPDPYNPHVSGIARLYLTDKAKHDEIAAEWTLRFAK 176

[Close]

BLAST of Cp4.1LG16g09320 vs. TrEMBL
Match: B9SM61_RICCO (Ubiquitin-conjugating enzyme E2, putative OS=Ricinus communis GN=RCOM_0878930 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 5.5e-76
Identity = 131/171 (76.61%), Postives = 151/171 (88.30%), Query Frame = 1


Query: 26  GGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFAT 85
           GGG  S++ + AP +SW S TSVS SGKRIQREM E N DPP DCSAGPKGDNLYHW +T
Sbjct: 11  GGGGGSAAAAAAPSSSWVSPTSVSTSGKRIQREMGELNNDPPPDCSAGPKGDNLYHWVST 70

Query: 86  IFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNVSLDILKDSWSPA 145
           I GPPGTPYEGGIFFLDI FP+DYPF PPKVVFKTRIYHCNVDS+GN+SLD+LKD WSPA
Sbjct: 71  IIGPPGTPYEGGIFFLDITFPTDYPFKPPKVVFKTRIYHCNVDSAGNLSLDMLKDGWSPA 130

Query: 146 LTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFAK 197
           LTI K+LIA++S+FT+P+PY+P  PG+AHLYLADRAKHDE+AA+WT+RFAK
Sbjct: 131 LTITKILIAIRSVFTHPDPYNPLVPGIAHLYLADRAKHDELAAQWTMRFAK 181

[Close]

BLAST of Cp4.1LG16g09320 vs. TrEMBL
Match: A0A061GT24_THECC (Ubiquitin-conjugating enzyme family protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_040041 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 8.0e-75
Identity = 137/176 (77.84%), Postives = 153/176 (86.93%), Query Frame = 1


Query: 24  LFGGGRSSSS--TSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYH 83
           + GGGRSSSS  T+ A   +W STTSVS SGKRIQREM+E N+DPP  CSAGPKGDNLYH
Sbjct: 50  MIGGGRSSSSSTTATAAGGTWVSTTSVSTSGKRIQREMSELNVDPPPHCSAGPKGDNLYH 109

Query: 84  WFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPK-VVFKTRIYHCNVDSSGNVSLDILKD 143
           W ATI GPPGTPY+GGIFFLDI FPSDYPF PPK VVFKTRIYHCNVD++GN+SLDILKD
Sbjct: 110 WVATIIGPPGTPYQGGIFFLDITFPSDYPFKPPKVVVFKTRIYHCNVDAAGNLSLDILKD 169

Query: 144 SWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFAK 197
           SWSPALT+ KVL A+KSIFTNP+PY+P+  G+A LYL D+AKHDEIAAEWTLRFAK
Sbjct: 170 SWSPALTVTKVLTAIKSIFTNPDPYNPHVSGIARLYLTDKAKHDEIAAEWTLRFAK 225

[Close]

BLAST of Cp4.1LG16g09320 vs. TAIR10
Match: AT3G13550.1 (AT3G13550.1 Ubiquitin-conjugating enzyme family protein)

HSP 1 Score: 265.8 bits (678), Expect = 2.1e-71
Identity = 120/157 (76.43%), Postives = 135/157 (85.99%), Query Frame = 1


Query: 40  TSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPPGTPYEGGIF 99
           +SW + TSVSASGKRIQREM E N+DPP DCSAGPKGDNLYHW ATI GP GTPYEGGIF
Sbjct: 26  SSWVAKTSVSASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIF 85

Query: 100 FLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNVSLDILKDSWSPALTIAKVLIAVKSIF 159
           FLDIIFPSDYPF PPK+VFKTRIYHCNVD++G++S++IL+DSWSPALTI KVL A++SIF
Sbjct: 86  FLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIF 145

Query: 160 TNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFAK 197
             P PY P  P +A LYL DR KHDE+A EWTLRFAK
Sbjct: 146 LKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFAK 182

[Close]

BLAST of Cp4.1LG16g09320 vs. TAIR10
Match: AT3G08690.1 (AT3G08690.1 ubiquitin-conjugating enzyme 11)

HSP 1 Score: 189.1 bits (479), Expect = 2.6e-48
Identity = 78/145 (53.79%), Postives = 111/145 (76.55%), Query Frame = 1


Query: 51  SGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYP 110
           + KRI +E+ +   DPPS+CSAGP  ++++HW ATI GPP +PY GG+F + I FP DYP
Sbjct: 2   ASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYP 61

Query: 111 FNPPKVVFKTRIYHCNVDSSGNVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAP 170
           F PPKV FKT++YH N++S+G++ LDILK+ WSPALTI+KVL+++ S+ T+PNP DP  P
Sbjct: 62  FKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 171 GVAHLYLADRAKHDEIAAEWTLRFA 196
            +AH+Y  DR+K++  A  WT ++A
Sbjct: 122 EIAHMYKTDRSKYESTARSWTQKYA 146

[Close]

BLAST of Cp4.1LG16g09320 vs. TAIR10
Match: AT2G16740.1 (AT2G16740.1 ubiquitin-conjugating enzyme 29)

HSP 1 Score: 188.3 bits (477), Expect = 4.4e-48
Identity = 77/143 (53.85%), Postives = 110/143 (76.92%), Query Frame = 1


Query: 53  KRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFN 112
           +RI +E+ E   DPP  CSAGP G++++HW ATI GP  +PY GG+F ++I FP DYPF 
Sbjct: 4   RRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFK 63

Query: 113 PPKVVFKTRIYHCNVDSSGNVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGV 172
           PPKVVF+T+++H N++S+GN+ LDILKD WSPALTI+KVL+++ S+ T+PNP DP  P +
Sbjct: 64  PPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123

Query: 173 AHLYLADRAKHDEIAAEWTLRFA 196
           AH+Y  D+ K++ +A  WT ++A
Sbjct: 124 AHIYKTDKTKYEAMARSWTQKYA 146

[Close]

BLAST of Cp4.1LG16g09320 vs. TAIR10
Match: AT5G56150.1 (AT5G56150.1 ubiquitin-conjugating enzyme 30)

HSP 1 Score: 182.6 bits (462), Expect = 2.4e-46
Identity = 74/145 (51.03%), Postives = 107/145 (73.79%), Query Frame = 1


Query: 51  SGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYP 110
           + KRI +E+ +   DPP  CSAGP GD+++ W ATI GP  +P+ GG+F + I FP DYP
Sbjct: 2   ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYP 61

Query: 111 FNPPKVVFKTRIYHCNVDSSGNVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAP 170
           F PPKV F+T++YH N++S+G++ LDILK+ WSPALT++KVL+++ S+ T+PNP DP  P
Sbjct: 62  FKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVP 121

Query: 171 GVAHLYLADRAKHDEIAAEWTLRFA 196
            +AH+Y  DR K++  A  WT ++A
Sbjct: 122 EIAHIYKTDRVKYESTAQSWTQKYA 146

[Close]

BLAST of Cp4.1LG16g09320 vs. TAIR10
Match: AT4G27960.2 (AT4G27960.2 ubiquitin conjugating enzyme 9)

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-45
Identity = 73/145 (50.34%), Postives = 108/145 (74.48%), Query Frame = 1


Query: 51  SGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYP 110
           + KRI +E+ +   DPP+ CSAGP  ++++HW ATI GP  +PY GG+F + I FP DYP
Sbjct: 32  ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 91

Query: 111 FNPPKVVFKTRIYHCNVDSSGNVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAP 170
           F PPKV F+T+++H N++S+G++ LDILK+ WSPALTI+KVL+++ S+ T+PNP DP  P
Sbjct: 92  FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 151

Query: 171 GVAHLYLADRAKHDEIAAEWTLRFA 196
            +AH+Y  D+ K++  A  WT ++A
Sbjct: 152 EIAHMYKTDKNKYESTARTWTQKYA 176

[Close]

BLAST of Cp4.1LG16g09320 vs. NCBI nr
Match: gi|449448836|ref|XP_004142171.1| (PREDICTED: constitutive photomorphogenesis protein 10 [Cucumis sativus])

HSP 1 Score: 365.2 bits (936), Expect = 7.4e-98
Identity = 175/185 (94.59%), Postives = 177/185 (95.68%), Query Frame = 1


Query: 12  MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 71
           MVGNRDHRP  P  GGGRSSSS SLA PTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 1   MVGNRDHRPPLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60

Query: 72  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG 131
           AGPKGDNLYHWFATIFGP GTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDS+G
Sbjct: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120

Query: 132 NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 191
           NVSLDILKD+WSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFANPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180

Query: 192 LRFAK 197
           LRFAK
Sbjct: 181 LRFAK 185

[Close]

BLAST of Cp4.1LG16g09320 vs. NCBI nr
Match: gi|659097798|ref|XP_008449820.1| (PREDICTED: constitutive photomorphogenesis protein 10 [Cucumis melo])

HSP 1 Score: 364.4 bits (934), Expect = 1.3e-97
Identity = 175/185 (94.59%), Postives = 177/185 (95.68%), Query Frame = 1


Query: 12  MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 71
           MVGNRD RPQ P  GGGRSSSS SLA PTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 1   MVGNRDQRPQLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60

Query: 72  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG 131
           AGPKGDNLYHWFATIFGP GTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDS+G
Sbjct: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120

Query: 132 NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 191
           NVSLDILKD+WSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180

Query: 192 LRFAK 197
           LRFAK
Sbjct: 181 LRFAK 185

[Close]

BLAST of Cp4.1LG16g09320 vs. NCBI nr
Match: gi|566148311|ref|XP_002299458.2| (hypothetical protein POPTR_0001s10830g [Populus trichocarpa])

HSP 1 Score: 293.1 bits (749), Expect = 3.6e-76
Identity = 134/171 (78.36%), Postives = 153/171 (89.47%), Query Frame = 1


Query: 26  GGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFAT 85
           GGG S+++TS     SW S +SVS SGKRIQREMTE N+DPP DCSAGPKGDNLYHW +T
Sbjct: 12  GGGSSATATS-----SWVSPSSVSTSGKRIQREMTELNMDPPPDCSAGPKGDNLYHWIST 71

Query: 86  IFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNVSLDILKDSWSPA 145
           + GPPGTPY+GGIFFLD+ FPSDYPF PPKVVFKTRIYHCNVDS+GN+SLDILKDSWSPA
Sbjct: 72  VIGPPGTPYQGGIFFLDLTFPSDYPFKPPKVVFKTRIYHCNVDSAGNLSLDILKDSWSPA 131

Query: 146 LTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFAK 197
           LTI KVL+A++SIFT+P+PY+P  PG+AHLYLADRAKHDE+AAEWTLRFAK
Sbjct: 132 LTITKVLLAIRSIFTHPDPYNPLVPGIAHLYLADRAKHDELAAEWTLRFAK 177

[Close]

BLAST of Cp4.1LG16g09320 vs. NCBI nr
Match: gi|590582669|ref|XP_007014687.1| (Ubiquitin-conjugating enzyme family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 292.7 bits (748), Expect = 4.7e-76
Identity = 137/175 (78.29%), Postives = 153/175 (87.43%), Query Frame = 1


Query: 24  LFGGGRSSSS--TSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYH 83
           + GGGRSSSS  T+ A   +W STTSVS SGKRIQREM+E N+DPP  CSAGPKGDNLYH
Sbjct: 2   MIGGGRSSSSSTTATAAGGTWVSTTSVSTSGKRIQREMSELNVDPPPHCSAGPKGDNLYH 61

Query: 84  WFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNVSLDILKDS 143
           W ATI GPPGTPY+GGIFFLDI FPSDYPF PPKVVFKTRIYHCNVD++GN+SLDILKDS
Sbjct: 62  WVATIIGPPGTPYQGGIFFLDITFPSDYPFKPPKVVFKTRIYHCNVDAAGNLSLDILKDS 121

Query: 144 WSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFAK 197
           WSPALT+ KVL A+KSIFTNP+PY+P+  G+A LYL D+AKHDEIAAEWTLRFAK
Sbjct: 122 WSPALTVTKVLTAIKSIFTNPDPYNPHVSGIARLYLTDKAKHDEIAAEWTLRFAK 176

[Close]

BLAST of Cp4.1LG16g09320 vs. NCBI nr
Match: gi|255572282|ref|XP_002527080.1| (PREDICTED: constitutive photomorphogenesis protein 10 [Ricinus communis])

HSP 1 Score: 292.0 bits (746), Expect = 7.9e-76
Identity = 131/171 (76.61%), Postives = 151/171 (88.30%), Query Frame = 1


Query: 26  GGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFAT 85
           GGG  S++ + AP +SW S TSVS SGKRIQREM E N DPP DCSAGPKGDNLYHW +T
Sbjct: 11  GGGGGSAAAAAAPSSSWVSPTSVSTSGKRIQREMGELNNDPPPDCSAGPKGDNLYHWVST 70

Query: 86  IFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNVSLDILKDSWSPA 145
           I GPPGTPYEGGIFFLDI FP+DYPF PPKVVFKTRIYHCNVDS+GN+SLD+LKD WSPA
Sbjct: 71  IIGPPGTPYEGGIFFLDITFPTDYPFKPPKVVFKTRIYHCNVDSAGNLSLDMLKDGWSPA 130

Query: 146 LTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFAK 197
           LTI K+LIA++S+FT+P+PY+P  PG+AHLYLADRAKHDE+AA+WT+RFAK
Sbjct: 131 LTITKILIAIRSVFTHPDPYNPLVPGIAHLYLADRAKHDELAAQWTMRFAK 181

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g09320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
COP10_ARATH	3.8e-70	76.43	Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1...	[more]
UB2E3_BOVIN	5.0e-54	56.04	Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1	[more]
UB2E3_HUMAN	5.0e-54	56.04	Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1	[more]
UB2E3_MOUSE	5.0e-54	56.04	Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2	[more]
UB2E2_MOUSE	1.2e-52	54.19	Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1	[more]

BLAST of Cp4.1LG16g09320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWU2_CUCSA	5.1e-98	94.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280420 PE=4 SV=1	[more]
B9GL37_POPTR	2.5e-76	78.36	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s10830g PE=4 SV=2	[more]
A0A061GS19_THECC	3.2e-76	78.29	Ubiquitin-conjugating enzyme family protein isoform 1 OS=Theobroma cacao GN=TCM_...	[more]
B9SM61_RICCO	5.5e-76	76.61	Ubiquitin-conjugating enzyme E2, putative OS=Ricinus communis GN=RCOM_0878930 PE...	[more]
A0A061GT24_THECC	8.0e-75	77.84	Ubiquitin-conjugating enzyme family protein isoform 2 (Fragment) OS=Theobroma ca...	[more]

BLAST of Cp4.1LG16g09320 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G13550.1	2.1e-71	76.43	Ubiquitin-conjugating enzyme family protein	[more]
AT3G08690.1	2.6e-48	53.79	ubiquitin-conjugating enzyme 11	[more]
AT2G16740.1	4.4e-48	53.85	ubiquitin-conjugating enzyme 29	[more]
AT5G56150.1	2.4e-46	51.03	ubiquitin-conjugating enzyme 30	[more]
AT4G27960.2	1.2e-45	50.34	ubiquitin conjugating enzyme 9	[more]

BLAST of Cp4.1LG16g09320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449448836\|ref\|XP_004142171.1\|	7.4e-98	94.59	PREDICTED: constitutive photomorphogenesis protein 10 [Cucumis sativus]	[more]
gi\|659097798\|ref\|XP_008449820.1\|	1.3e-97	94.59	PREDICTED: constitutive photomorphogenesis protein 10 [Cucumis melo]	[more]
gi\|566148311\|ref\|XP_002299458.2\|	3.6e-76	78.36	hypothetical protein POPTR_0001s10830g [Populus trichocarpa]	[more]
gi\|590582669\|ref\|XP_007014687.1\|	4.7e-76	78.29	Ubiquitin-conjugating enzyme family protein isoform 1 [Theobroma cacao]	[more]
gi\|255572282\|ref\|XP_002527080.1\|	7.9e-76	76.61	PREDICTED: constitutive photomorphogenesis protein 10 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016135	UBQ-conjugating_enzyme/RWD
IPR000608	UBQ-conjugat_E2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042023	DNA endoreduplication
biological_process	GO:0043248	proteasome assembly
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0010099	regulation of photomorphogenesis
biological_process	GO:0051510	regulation of unidimensional cell growth
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g09320.1	Cp4.1LG16g09320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 54..189 score: 1.1
IPR000608	Ubiquitin-conjugating enzyme E2	PROFILE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 53..185 score: 39
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	G3DSA:3.10.110.10		coord: 41..195 score: 2.1
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	unknown	SSF54495	UBC-like	coord: 40..195 score: 5.51
None	No IPR available	PANTHER	PTHR24068	FAMILY NOT NAMED	coord: 45..196 score: 1.1
None	No IPR available	SMART	SM00212	ubc_7	coord: 53..196 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG16g09320	Cucsa.153150	Cucumber (Gy14) v1	cgycpeB0409
Cp4.1LG16g09320	CmoCh20G000310	Cucurbita moschata (Rifu)	cmocpeB517
Cp4.1LG16g09320	Cla003164	Watermelon (97103) v1	cpewmB287
Cp4.1LG16g09320	Csa4G280420	Cucumber (Chinese Long) v2	cpecuB278
Cp4.1LG16g09320	MELO3C014684	Melon (DHL92) v3.5.1	cpemeB278
Cp4.1LG16g09320	ClCG02G024020	Watermelon (Charleston Gray)	cpewcgB255
Cp4.1LG16g09320	CSPI04G12950	Wild cucumber (PI 183967)	cpecpiB282
Cp4.1LG16g09320	MELO3C014684.2	Melon (DHL92) v3.6.1	cpemedB324
Cp4.1LG16g09320	CsaV3_4G023310	Cucumber (Chinese Long) v3	cpecucB0346
Cp4.1LG16g09320	Bhi10G000350	Wax gourd	cpewgoB0354
Cp4.1LG16g09320	CsGy4G012520	Cucumber (Gy14) v2	cgybcpeB496
Cp4.1LG16g09320	Carg06948	Silver-seed gourd	carcpeB0733

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG16g09320	Silver-seed gourd	carcpeB0654
Cp4.1LG16g09320	Silver-seed gourd	carcpeB1273
Cp4.1LG16g09320	Cucumber (Chinese Long) v3	cpecucB0333
Cp4.1LG16g09320	Cucurbita pepo (Zucchini)	cpecpeB287
Cp4.1LG16g09320	Cucurbita pepo (Zucchini)	cpecpeB310
Cp4.1LG16g09320	Cucurbita maxima (Rimu)	cmacpeB564
Cp4.1LG16g09320	Cucurbita maxima (Rimu)	cmacpeB627
Cp4.1LG16g09320	Cucurbita moschata (Rifu)	cmocpeB576
Cp4.1LG16g09320	Wild cucumber (PI 183967)	cpecpiB268
Cp4.1LG16g09320	Bottle gourd (USVL1VR-Ls)	cpelsiB227