Cp4.1LG16g08460 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG16g08460
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Pentatricopeptide repeat superfamily protein
Location	Cp4.1LG16 : 8059764 .. 8071381 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTACAGTTTTGTATTCGAAGCATTGGATTTCACTTCGCTCAAATCGCTCGATTTCAATTCAGAAACTACGTTCGAAGTACAGAGAAAAATTCTGCCGTTCACATCAACCTCCTCACCCTGTGCTTCAACGCTCAATCGCTTCGTCAAACCAAAGAAGTCCACGCCATTTGCCTTCTCAATGGCTTGCTTCCTCATAGTGTATCACTCTGTGCTTCCCTTATTCTTAATTACGCCAAGTTTCAACACCCAGAATCGTTCTGTACTCTGTTCCATCAAACTGTCCAGAATTGTCGTACTGCGTTCCTGTGGAATACCTTGATTCGCGCTCACTCCATTGCTGGGAATGGGACGCTTGATGGGTTGGAGACGTACAACAGGATGGTTCGATTCGGTGTTCAACTCGATGACCATACATTTCCTTTTGTTCTCAAGATATGTTCTGATTCGCTTGATATTTGCAAAGGTATGGAGGTTCATGGGGTTGTGTTTAAGTTGGGATTTGATTCTGATGTCTATGTTGGCAATACGCTGTTGATGCTGTATGGGAATTGTGGGTTCTTAAATGATGCTAAAAAGGTGTTCGATGAAATGTCTGAGAGAGATGTCGTCTCGTGGAATACGGTTATTGGGCTCCTTTCAGTTAATGGGGATTATAGGGAGGCTCGTAACTATTACTTTTGGATGACTTTGAGGTCCGGAATTCAACCAAATTTGGTGAGTGTTATCAGTCTTTTGCCGATTTCTGCTGGCCTTGAAGACGAGGAGATGACAAGACGAATTCATTGTTACATTGTGAAAGTTGGTTTGGATTCTTTGGTAACCTCTTGCAATGCACTTGTCGATGCGTATGGGAAATGTGGGAGTGTGAAAGCTTCATGGCAAGTTTTTGATGAGATAATTGAGAAGAATGAAGTCTCATGGAATTCAATCATCAATGGTCTAACTTTTAAGGGTCATTTCTGGGATGCCTTGGATGTTTTTAGGACGATGATCGATGCAGGAACTAAACCGAACTCGGTCACCATTTCGAGCATTCTTCCTGTGTTTGTTGAGCTTGAATGTTTCAAAGCAGGAAAAGAAATTCATGGGTTCAGTATGAGAATGGGAACAGAAACTGATCTTTTCACTGCCAATTCCCTGATCGATATGTATGCCAAGTCTGGTCATTCAACTGAGGCATCTAGCATATTCCACAGCATGGATAGAAGGAATATAGTTTCTTGGAACACTATGATCGCTAATTATGCGCTAAATGGGGTCGCGTTGGAAGCAATAAGATTTGTAATACTATTGCAAGAGAGTGGAGAACGCCCTAATGCAGTGACCTTTACCAATGTTCTTCCTGCTTGTGCACGTTTGGGTCACCTTGGTCCTGGCAAAGAAATACATGCCATGGGCGTTCGTTTAGGACTAACATCTGATTTGTTTGTAACCAATGCTCTGACCGACATGTATGCGAAATGTGGTTGCTTTCGTTCTGCTCGAAATGTGTTCAACACGTCCCATAAAGATGAAGTTTCTTATAACATATTAATTACAGGATATTCTGAAACAAACGATTGCTTGGAGTCTCTGAATTTGTTCTCAGAAATGAGGCTGCTTGGTAAAAAGCCTGATGTCGTTTCCTTTATGGGGGTCATATCAGCTTGTGCAAACCTAGCCGCAGTCAAGCAAGGTAAAGAGATTCATGGTGTTGCATTAAGAAATCATCTTAACTCTCATCTATTTGTCTCAAACTCCCTATTGGACTTTTATACAAAATGTGGAAGAATTGATCTTGCTTGTAAGATCTTCAATCAAATTCTATTCAAAGATGTAGCATCTTGGAATACTATGATTTTAGGATATGGAATGATAGGAGAGTTGGAATCTGCAATTAATATGTTTGAAGCAATGAGGGATGATAAAGTGCAATATGATTTAGTTTCATATATTGCAGTTCTGTCAGCTTGTAGTCATGGAGGACTAGTTGAACGTGGTTGGCAATACTTCAGCGAGATGTTGGATCAACATCTTGAACCCACCGAAATGCACTATACATGTCTGGTTGATCTACTCGGCCGTGCTGGTTTCGTAGAAGAGGCAGCAGAGCTGATTCGGCGACTACCGATAGCGCCCGATTCAAATATTTGGGGAGCTCTACTTGGTGCTTGTCGAATTTACGGAAACGTTGAACTAGGGTGTAAGGCAGCAGAGCATTTATTTGAGCTAAAGCCTCAGCATTGTGGATACTATATTCTTCTTTCAAACATGTATGCAGAAACAGGAAGATGGGATGAGGTAAACAGGATTAGGGAACTTATGAAGTCTAGAGGAGCGAAAAAGAGCCCTGGCTGTAGTTGGGTTCAGATTCATGGCCAGCTGCACGCTTTTGTGGTTGATGATCGAGCAGAGGGATTTGAATTCGTTTGATCTGATATGTTATTACAATGTCAAATTCATTATAACAAAGAGTTTAGTCTGCGTTTAATCGGTTTGGATACAGCAGGTTTGTAGTGTCCATGAAATAGAATTTTATTTATTTCATCTCATTACAATTAAATATGAAAGGATGAGGTTACAGACATGTTATTGTTAAGGGGAAAAGAAAAGAAAAAAGAAAGAATGTGAATGAGGTAATTAATGATCAACCCAATCGACTGCCACTCTTCCTGCAACTGTGAAAGCCTATAGTTTGGGAGGAGGAAGCAACCACTTTTGGGCCTGCACGTAATCAAGGTTGATGAAGGGTTTCGCTTGTGCTTCACTCAGCTGTTTGCTGAATTTTACACGCTTGCTCGTCTCCGCTCCCGGCCCCGAACACTTAAATTCTCCGAAGAAAACCGTCTTGTCAAAAGCGGGGTTGTTCATGTCGTCCCAGCCTTCAGGATGAAGGATGTCGGCAATGGTGGTGTAGGCAAACACAACTCTGGACCAAGGCCTCCAGGATCTTGCCAAATAAGTGTTCGGCCCGCCAGTGCCTGTAACGCTGCAATGCGCAAACACATACCCACTGGGGTCGTCTTCCTTTTCTCTTGAATGCGCTGCAATCACTCCCAATCCCCCTTCTCCCAGCACATTCAGCTGACTGTTCAAATACAGGGACGTTGCCTTCCCGAAGATGAAGTCCACAGTGCCTTCAATGATGCAATCCTTGTACACATGCATCCCGTCGTCGTCGCACAGGGTGTCTTGGAACCCTAGGAATTTGCAATTGTAAATTGCGGCTTTATTCCCTCTGATTCTCGCCGCCAGTGCCGGACCTCCTTTTCTCGCATCCGGTCTTGGAGAAGTGTTCTGATTTTATTCAAAAATTGATTAGAAAACGATACCCAATTAATCCTAAAATGCATTTAATTAACAAATTACCTCGATCACGAGATTGGCAGCAACAAAATACTCAGCCTCGACGGTCAAAGTTCCACTGTACACGGTGCCGTATTTTTTGGAATCTCCATCGAATGTCAATTTTGGCATATTCTTAGGGGAACCGTAAAGGGTAATGAAGGGCTGATTTCTCTCGATCGTAAGCTTCTCCTTATAAACTCCTTCCCCTATCCAAATCACGACGCGTTTGGTGTTACCGGCTGGAACGCTGGCGATGGCTTCGGTGACAGTCTTGAAGTCTCCGCTTCCGTCGGCCCTCACTTTCACGACGGTGGAGCCTTCTTCAGCGGCCACAAGGGCGGGATCAAGCTCGGCCTTGCGGTCGGCTAAGGGCTTCACATGTCCGGAAAACCAAGCTTCTAACTGCGACTTCTCTGCAGGAACCTCTGTTGTAGCAGAAGAGATGGGTGCAAAAGCTGCCAGGAAGATGAGCAATGTTGTGAGAGCAATATTCATATTTTTTGTTGTTTTCTTGAAGCGATTTATTTTATTTTTAAAATAAGGATGGGTGAATGAGTACGTTGAATTGCATGGAGAAGGTAGGGATTATATAGGGTGATGGGTCCCACTGTGAACCATAAGAACCCACCTAATATTTGTGAATTCGTTTTACCTTTCCGTATCTGGTGGAAGACTATTTCCTCCAAACAAACAAAAATATAATTTTAAAATAACATTTTATTTTCTTCCCAATAAAAGGCTCTACAAACAAATAAATAATTAACAAGAGAGGCTCTAGAACATCATAGTGCCATTGTCCCTCGGCAACTTGTAGCTGAAAGGACCGGTGCTGTTCTGAAGTTCGTGAGTTTAGATGAACATGATGTCCCAAACTTGAAAGATTTCAAGGAGATGTTTACAACAAAAACAAAGCCTGTGGTTACCCATCATGTCTCAAATGTACTAGTACACCCTTCTATTTGATGTTGTTTTTCGATAAGGCTAGGGAAATCCTTTCTTTTCCATGAGGTTGTTGGAAGAAAAATAAAATGCATAAAATAAGGTGCCGTGCCCTTCGATCTCGACGACGGAGCCGTCGCCGAATTTTACTGTCCCGCGAATTCCCGAGTCAAGCTCGGAGAATGCAGACTTGGCCCCGGTCATATGGTTTGTTGCCCCCGTGTCAAGGACCATCGCCGGTGCTCTTGCTGTTCACCTCTTTCACTGATTTGAGCGAACTCGCTCCTCTTCCAGTTGAATTGGCTCCCCAGTTGGTGCCTTTGTTATGCACAATTGGAGCTCTTCCTCGGGTTCGAGGCTCACCGGAGCAGTTATGCCGTCGTCGATTACCTCTGTGGATTTGGGGAGCTCTTCCCCGGGATTAGGGACATCAGGGTGTCACCATGAAAAGGGCCCGGCTCATCCTTCGGATTGAGCCACATGGGCCTTCTCGGCCATCATTTCTGTCTCGCTGATGCTGCCACCGAGTGTGGTGATGCTGTTGGCGAGCCCCGTGATCCGCATTGAAAAATCATCGACGGATCCGCCGTCCTTAAAGCGAATCTCCGAGAGCTCCTTCCACAGCTGCTCGATGTTGGATTCCCGCACTCGTTGTACCATCGGGCGCAGTGCACTTGGTGGAGAGAGATGCATCTCTGGGGGCACAGATCGACAGCGTGCCATAACCCGTGCGCCTGTAGGTTGACACGCATCAACAAGGTCCAACTCAATATCGGATACTGAACAACGACAGTCGTTATCTCCCTGATCACTCACTCAACGACAACTCGACACCCATCATCACAAGGTCGGCCTTCTCGTGGTGGTGATGTGGATGCCAGCACTTTGCATTTTGTTCGAGTTACCTGAGACCTGTGTGTTATTAGGTCAACACTCTAACCACTTGAGCTATTCAACTTGATTGTTGATAAGTTGGCTCCTCTGCAATGATATACACCGATGGCTTCAACCTGACTCTGATACCACTTGTTGTTTTTCGATAAGACCGGTGTGTTATTAGGTCGACACTCTAACCACTTGAGCTATTCAACTTGATTGTTGATAGGTTGGCTCCTCCGCAATGATATACACCGATGGCTTCAACCTGGCTCTGATACCACTTGTTGTTTTTCGATAAGACCTGTGTTATTAGGTCGACACTCTAACCACTTGAACTATTCAACTTGATTGTTGATAGGTTGGCTCCTCCGCAATGATATACACCAATGGCTTAAACCTGGCTCTGATACCACTTGTTGTTTTTCGATAATCGACCAGGGAAATCTTTCTTTTCGTGAGAGGAAATCATCGACAGGAGGTTGTTGGAAGAAAAATAAAATGCGTAAAATAAGAAAGAGAGAATGGCTGAAATTTTGACTGCGCTTCAAAATCAGGGTATTAAAGCTTCTTAACAGATTTTCTATTTAAATATAACCTATCATAAAAACAGGCCAACTAAATCTGTGACAATTCCTACAAAATTGCTTCTAAAACTTTGTTAATTCTTTGTCAAATGGTCAAACGGAGAACTAATAAAATCGTGTGAATCTAAATAAGGAAAAACTAAGTTTTATCTAACATTTGATATCCACTATTGTTGTGAGATGTCACATTGGCTTTATCTAACATTTGATATCCACTATTGTTGTGAGATGTCACATTGGTGGAGAAGGGAACAGCATGCTTTATAAGGGTTTGGAAACCTCTCCCCATCAGACGTGTTTTAAAACCTTGAAAGGAAGCCCGAAAGAGAAAGTCCAAAGAGAACAATATCTGCTAGTGGTGGGTTTGGGCCCAGTCCCTAATGCTGAACGTGCTGCTCTGTGCTCGTTCAATATTGAAAACATGCATCCAACGGACATTGCAACTTTTCTTGATCAACAGGTACATCAAGGGAGATTGTATTACTAGAGTGCATCAGTTACTTTCTATGGGTCCTTAAAAATATTTTAATGCAGCATGGTATAGCCATCAGATCAGGACATCACTGTGCGCAGCCCCTCCATCGGGCCCTCGGTGTGAGCTCGAGCGCACGAGCTAGCCTTTACTTCTACAACACAAAAGAGGATGTGGACTACTTTATCCAGGCTCTAAATGACACTGTAAGTTTCTTCGACTCCTTCAAGTAGGGATCTGGTAATACCAAAGCTTGTTGGTTTGGTGGGTCCACTGCATGGATTATGCTCTGTTTCTTGGTTTGGTGAAGATTGTCTTTCTTCTTGCTATCTTGAGCTGAGCCTGTGACATTTACTACCAGATGTTTGCCCATATAATGTTCTTGTAAAGACCACAGATTTCTCCTAGTTTTAGACTTTAGTTTATCTATAAATTATCGAATTAAGCTATGCTTTCACTCATTTTTCTCAAGATAACAAATTATTATATACAGCAATAAACCATCGTGTCATGAGCCCAAAGAATCTGAGACTTCTAATATCTAAACGTATACATAAATTCTAATTCTAAAGCTTAAGCTTATATATGAGATGAGATTCTACCTCAGTTGTTGGAGAGGAGACTGAAACATTCTTATAAATCAAGATATAAAGAAAATTTGTAAAAAGATAAAGAAAGTGGAAAGAAAATCCTTATTAGGTTATTTTCTTCTTTTTAGAAGCTTGTGAATTATTTTTACGAACCTTGTGCTTTAGGTCTAAGTTTTAATCTTAGTTTTATAGTGATAGTTTTATGTTTGGGTTCAAAATGTAACGAAAAACATACCAATTAAGTAAAATGATCCATATATTATTCTCAAACAAAACTGTCTATCATACTACAATACGATGTCGTATAATTTGACGACAATAATTGAGAATAAGGTCATGGGAAACGACATTGTAAAAGGGGAAAAAAGAAAGAATGTGAATGAGGTAATTAATGATCAACCCGATCGATTGCGGTTGCGGAGAGGTATTTGGTGTATGTGAGAATACTGCCACTCGAATACTGCCACTCGATCGAATACTGCCACTCTCCCTGCAACTATGAAAGCCTATAGTTTGGGAGGAGGAAGCAGCCACTTTTGAGCCTGCACGTAATCAAGGTTGATGAAGGGTTTTGCTTGTGCTTCACTCAGCTGTCTGCTGAATTTTATACGCTTGCTCGTCTCCGCTCCCGGCCCCGAACACTTGTATTCTCCAAAGAAAACCGTCTTGTCAAAAGCGGGGTTGTTCATGTCGTCCCAGCCTTCAGGATGAAGGATGTCGGCAATGGTGGTGTAGGCAAACACAACTCTGGACCAGGGCCTCCAAGATCTTCCCAAATAAGTGTTCGGCCCGCCAGTGCCTGTAATGCTGCAATGCGCAAACACATATCCACTGGGGTCGTCTTCCTTTTCTCTTGAATGCGCTGCAATCACTCCCAATCCCCCGACTCCCACCACATTCAGCTGACTGTTCAAATACAGGGCCGTTGCCTTCCCGAAGATGAAGTCCACGGTGCCTTCAATGAAGCAATCCTTGTACACATGCAGCCCGTCGTCGTCGCACAGGGTGTCTTGGAACCCTATGAATTTGCAATTGTAAACTGCGGCTTTATTCCCTCTGATTCTCGCTGCCAATGCCGGACCTCCTTTTCCGGCATGCGGTCTTGGAGAAGTGTTCTGTTTTTATTCATTCAAAAATTGATCAGAAGGAGAAGTGTTCTGTTTTTTATTCAAAAATTGATCAGAAGAAGGAGAAGTGTTCGCATTTAATTCACAAATTACCTCGAGCACCAGATTGGCAGCAACAAAATAATCAGCCTCCACGGTCAAAGTTCCACTGTAAACGGTACCGTATTTTTTGGCATCTCCATCAAATGTCAATTTCGGCATATTCTTAGGGGAACCGTAAAGGGTAATGAAGGGCTGATTTCTCTCGATCGTAAGCTTCTCCTTATAAACTCCTTCCCCAATCCAAATCACGACGCGTTTGGTGTTACCGGCTGGAACGCTGGCGATGGCTTCGGTGACAGTCTTGAAGTCTCCGCTTCCGTCGGCCCTCACTTTCACGACGGTGGAGCCTTCTTCAGCGGCCACAAGGGCGGGATCAAGCTCGGCCTTGCGGTCGGCTAAGGGCTTCACATGCCCGGAAAACCAAGCTTCTAACTGCGACTTCTCTGCAGGAACCTCTGTTGTAGCAGAAGAGATGGGTGCAAAAGCTGCGAGGAAGATGAGCAATGTTGTGAGAGGAATGTTCATATTTCTGTTGTTTTCTTGAAGGGATTTATTTTATTTTTAAAATAAGGATGGGTGGATGAGTACGTTGAATTGCATGGAGAAGGTAGGGATTATATTGGGTGATGGGGCCCACTGTGAACCATAAGAACCTCCCTAACATTTCTGGATTAGTTTTAGCTTTCCGTCTCTAGTGGACGACTATTTCCTCCAAACAAAAAATATATATATATATATTTTCTAATATACCCTTCATTTCCCCTCTAATTACTCTAAACTCCCCTCCCTTTATCAAGGTCCAGATATTAAGTGGAATGGGACGCTTGATGGGTTGCAGACGTACAACAGGATGGTTCGACTCGGTGTTCAACTCGATGACCATACATTTCCTTTTGTTCTCAAGATATGTTCTGATTCGCTTGATATTTGCAAAGGTATGGAGGTTCATGGGGTTGTGTTTAAGTTGGGTTTTGATTCTGATGTCTATGTTGGCAATACGCTGCTGATGCTGTATGGGAATTGTGGGTTCTTAAATGATGCTACGAAGGTGTTCGATGAAATGTCTGAGAGAGATGTCGTCTCGTGGAATACGGTTATTGGGCTCCTTTCAGTTAATGGGGATTATAGGGAGGCTCGTAACTATTACTTTTGGATGACTTTGAGGTCCGGAATTCAACCAAATTTGGTGAGTGTTATCAGTCTTTTGCCGATTTCTGCTGGCCTTGAAGACGAGGAGATGACAAGACGAATTCATTGTTACATTGTGAAAGTTGGTTTGGATTCTTTGGTAACCTCTTGCAATGCACTTGTCGATGCGTATGGGAAATGTGGGAGTGTGAAAGCTTCATGGCAAGTTTTTGATGAGATAATTGAGAAGAATGAAGTCTCATGGAATTCAATCATCAATGGTCTAACTTTTAAGGGTCATTTCTGGGATGCCTTGGATGTTTTTAGGACGATGATCGATGCAGGAACTAAACCGAACTCGGTCACCATTTCGAGCATTCTTCCTGTGTTTGTTGAGCTTGAATGTTTCAAAGCAGGAAAAGAAATTCATGGGTTCAGTATGAGAATGGGAACAGAAACTGATCTTTTCACTGCCAATTCCCTGATCGATATGTATGCCAAGTCTGGTCATTCAACTGAGGCATCTAGCATATTCCACAGCATGGATAGAAGGAATATAGTTTCTTGGAACACTATGATCGCTAATTATGCGCTAAATGGGGTCGCGTTGGAAGCAATAAGATTTGTAATACTATTGCAAGAGAGTGGAGAACGCCCTAATGCAGTGACCTTTACCAATGTTCTTCCTGCTTGTGCACGTTTGGGTCACCTTGGTCCTGGCAAAGAAATACATGCCATGGGCGTTCGTTTAGGACTAACATCTGATTTGTTTGTAACCAATGCTCTGACCGACATGTATGCGAAATGTGGTTGCTTTCGTTCTGCTCGAAATGTGTTCAACACGTCCCATAAAGATGAAGTTTCTTATAACATATTAATTACAGGATATTCTGAAACAAACGATTGCTTGGAGTCTCTGAATTTGTTCTCAGAAATGAGGCTGCTTGGTAAAAAGCCTGATGTCGTTTCCTTTATGGGGGTCATATCAGCTTGTGCAAACCTAGCCGCAGTCAAGCAAGGTAAAGAGATTCATGGTGTTGCATTAAGAAATCATCTTAACTCTCATCTATTTGTCTCAAACTCCCTATTGGACTTTTATACAAAATGTGGAAGAATTGATCTTGCTTGTAAGATCTTCAATCAAATTCTATTCAAAGATGTAGCATCTTGGAATACTATGATTTTAGGATATGGAATGATAGGAGAGTTGGAATCTGCAATTAATATGTTTGAAGCAATGAGGGATGATAAAGTGCAATATGATTTAGTTTCATATATTGCAGTTCTGTCAGCTTGTAGTCATGGAGGACTAGTTGAACGTGGTTGGCAATACTTCAGCGAGATGTTGGATCAACATCTTGAACCCACCGAAATGCACTATACATGTCTGGTTGATCTACTCGGCCGTGCTGGTTTCGTAGAAGAGGCAGCAGAGCTGATTCGGCGACTACCGATAGCGCCCGATTCAAATATTTGGGGAGCTCTACTTGGTGCTTGTCGAATTTACGGAAACGTTGAACTAGGGTGTAAGGCAGCAGAGCATTTATTTGAGCTAAAGCCTCAGCATTGTGGATACTATATTCTTCTTTCAAACATGTATGCAGAAACAGGAAGATGGGATGAGGTAAACAGGATTAGGGAACTTATGAAGTCTAGAGGAGCGAAAAAGAGCCCTGGCTGTAGTTGGGTTCAGATTCATGGCCAGCTGCACGCTTTTGTGGTTGATGATCGAGCAGAGGGATTTGAATTCGTTTGATCTGATATGTTATTACAATGTCAAATTCATTATAACAAAGAGTTTAGTCTGCGTTTAATCGGTTTGGATACAGCAGGTTTGTAGTGTCCATGAAATAGAATTTTATTTATTTCATCTCATTACAATTCAATATGAAAGGATGAGGTTACAGACATGTTATTGTTAAGGGGAAAAGAAAAGAAAAAAGAAAGAATGTGAATGAGGTAATTAATGATCAACCCAATCGACTGCCACTCTTCCTGCAACTGTGAAAGCCTATAGTTTGGGAGGAGGAAGCAACCACTTTTGGGCCTGCACGTAATCAAGGTTGATGAAGGGTTTCGCTTGTGCTTCACTCAGCTGTTTGCTGAATTTTACACGCTTGCTCGTCTCCGCTCCCGGCCCCGAACACTTAAATTCTCCGAAGAAAACCGTCTTGTCAAAAGCGGGGTTGTTCATGTCGTCCCAGCCTTCAGGATGAAGGATGTCGGCAATGGTGGTGTAGGCAAACACAACTCTGGACCAAGGCCTCCAGGATCTTGCCAAATAAGTGTTCGGCCCGCCAGTGCCTGTAACGCTGCAATGCGCAAACACATACCCACTGGGGTCGTCTTCCTTTTCTCTTGAATGCGCTGCAATCACTCCCAATCCCCCTTCTCCCAGCACATTCAGCTGACTGTTCAAATACAGGGACGTTGCCTTCCCGAAGATGAAGTCCACAGTGCCTTCAATGATGCAATCCTTGTACACATGCATCCCGTCGTCGTCGCACAGGGTGTCTTGGAACCCTAG

mRNA sequence

ATGTTACACATTGGATTTCACTTCGCTCAAATCGCTCGATTTCAATTCAGAAACTACGTTCGAAGTACAGAGAAAAATTCTGCCGTTCACATCAACCTCCTCACCCTGTGCTTCAACGCTCAATCGCTTCGTCAAACCAAAGAAGTCCACGCCATTTGCCTTCTCAATGGCTTGCTTCCTCATAGTGTATCACTCTGTGCTTCCCTTATTCTTAATTACGCCAAGTTTCAACACCCAGAATCGTTCTGTACTCTGTTCCATCAAACTGTCCAGAATTGTCGTACTGCGTTCCTGTGGAATACCTTGATTCGCGCTCACTCCATTGCTGGGAATGGGACGCTTGATGGGTTGGAGACGTACAACAGGATGGTTCGATTCGGTGTTCAACTCGATGACCATACATTTCCTTTTGTTCTCAAGATATGTTCTGATTCGCTTGATATTTGCAAAGGTATGGAGGTTCATGGGGTTGTGTTTAAGTTGGGATTTGATTCTGATGTCTATGTTGGCAATACGCTGTTGATGCTGTATGGGAATTGTGGGTTCTTAAATGATGCTAAAAAGGTGTTCGATGAAATGTCTGAGAGAGATGTCGTCTCGTGGAATACGGTTATTGGGCTCCTTTCAGTTAATGGGGATTATAGGGAGGCTCGAAAAGAAATTCATGGGTTCAGTATGAGAATGGGAACAGAAACTGATCTTTTCACTGCCAATTCCCTGATCGATATGTATGCCAAGTCTGGTCATTCAACTGAGGCATCTAGCATATTCCACAGCATGGATAGAAGGAATATAGTTTCTTGGAACACTATGATCGCTAATTATGCGCTAAATGGGGTCGCGTTGGAAGCAATAAGATTTGTAATACTATTGCAAGAGAGTGGAGAACGCCCTAATGCAGTGACCTTTACCAATGTTCTTCCTGCTTGTGCACGATATTCTGAAACAAACGATTGCTTGGAGTCTCTGAATTTGTTCTCAGAAATGAGGCTGCTTGGTAAAAAGCCTGATGTCGTTTCCTTTATGGGGGTCATATCAGCTTGTGCAAACCTAGCCGCAGTCAAGCAAGGTAAAGAGATTCATGGTGTTGCATTAAGAAATCATCTTAACTCTCATCTATTTGTCTCAAACTCCCTATTGGACTTTTATACAAAATGTGGAAGAATTGATCTTGCTTGTAAGATCTTCAATCAAATTCTATTCAAAGATGTAGCATCTTGGAATACTATGATTTTAGGATATGGAATGATAGGAGAGTTGGAATCTGCAATTAATATGTTTGAAGCAATGAGGGATGATAAAGTGCAATATGATTTAGTTTCATATATTGCAGTTCTGTCAGCTTGTAGTCATGGAGGACTAGTTGAACGTGGTTGGCAATACTTCAGCGAGATGTTGGATCAACATCTTGAACCCACCGAAATGCACTATACATGTCTGGTTGATCTACTCGGCCGTGCTGGTTTCGTAGAAGAGGCAGCAGAGCTGATTCGGCGACTACCGATAGCGCCCGATTCAAATATTTGGGGAGCTCTACTTGGTGCTTGTCGAATTTACGGAAACGTTGAACTAGGGTGTAAGGCAGCAGAGCATTTATTTGAGCTAAAGCCTCAGCATTGTGGATACTATATTCTTCTTTCAAACATGTATGCAGAAACAGGAAGATGGGATGAGGTAAACAGGATTAGGGAACTTATGAAGTCTAGAGGAGCGAAAAAGAGCCCTGGCTGTAGTTGGGTTCAGATTCATGGCCAGCTGCACGCTTTTGTGGTTGATGATCGAGCAGAGGGATTTGAATTCTGGAATGGGACGCTTGATGGGTTGCAGACGTACAACAGGATGGTTCGACTCGGTGTTCAACTCGATGACCATACATTTCCTTTTGTTCTCAAGATATGTTCTGATTCGCTTGATATTTGCAAAGGTATGGAGGTTCATGGGGTTGTGTTTAAGTTGGGTTTTGATTCTGATGTCTATGTTGGCAATACGCTGCTGATGCTGTATGGGAATTGTGGGTTCTTAAATGATGCTACGAAGGTGTTCGATGAAATGTCTGAGAGAGATGTCGTCTCGTGGAATACGGTTATTGGGCTCCTTTCAGTTAATGGGGATTATAGGGAGGCTCGTAACTATTACTTTTGGATGACTTTGAGGTCCGGAATTCAACCAAATTTGCTTGAATGTTTCAAAGCAGGAAAAGAAATTCATGGGTTCAGTATGAGAATGGGAACAGAAACTGATCTTTTCACTGCCAATTCCCTGATCGATATGTATGCCAAGTCTGGTCATTCAACTGAGGCATCTAGCATATTCCACAGCATGGATAGAAGGAATATAGTTTCTTGGAACACTATGATCGCTAATTATGCGCTAAATGGGGTCGCGTTGGAAGCAATAAGATTTGTAATACTATTGCAAGAGAGTGGAGAACGCCCTAATGCAGTGACCTTTACCAATGTTCTTCCTGCTTGTGCACGATATTCTGAAACAAACGATTGCTTGGAGTCTCTGAATTTGTTCTCAGAAATGAGGCTGCTTGGTAAAAAGCCTGATGTCGTTTCCTTTATGGGGGTCATATCAGCTTGTGCAAACCTAGCCGCAGTCAAGCAAGGTAAAGAGATTCATGGTGTTGCATTAAGAAATCATCTTAACTCTCATCTATTTGTCTCAAACTCCCTATTGGACTTTTATACAAAATGTGGAAGAATTGATCTTGCTTGTAAGATCTTCAATCAAATTCTATTCAAAGATGTAGCATCTTGGAATACTATGATTTTAGGATATGGAATGATAGGAGAGTTGGAATCTGCAATTAATATGTTTGAAGCAATGAGGGATGATAAAGTGCAATATGATTTAGTTTCATATATTGCAGTTCTGTCAGCTTGTAGTCATGGAGGACTAGTTGAACGTGGTTGGCAATACTTCAGCGAGATGTTGGATCAACATCTTGAACCCACCGAAATGCACTATACATGTCTGGTTGATCTACTCGGCCGTGCTGGTTTCGTAGAAGAGGCAGCAGAGCTGATTCGGCGACTACCGATAGCGCCCGATTCAAATATTTGGGGAGCTCTACTTGGTGCTTGTCGAATTTACGGAAACGTTGAACTAGGGTGTAAGGCAGCAGAGCATTTATTTGAGCTAAAGCCTCAGCATTGTGGATACTATATTCTTCTTTCAAACATGTATGCAGAAACAGGAAGATGGGATGAGGTAAACAGGATTAGGGAACTTATGAAGTCTAGAGGAGCGAAAAAGAGCCCTGGCTGTAGTTGGGTTCAGATTCATGGCCAGCTGCACGCTTTTGTGGTTGATGATCGAGCAGAGGGATTTGAATTCTTTGGGAGGAGGAAGCAACCACTTTTGGGCCTGCACGTAATCAAGGTTGATGAAGGGTTTCGCTTGTGCTTCACTCAGCTGTTTGCTGAATTTTACACGCTTGCTCGTCTCCGCTCCCGGCCCCGAACACTTAAATTCTCCGAAGAAAACCGTCTTGTCAAAAGCGGGGTTGTTCATGTCGTCCCAGCCTTCAGGATGAAGGATGTCGGCAATGGTGGTGTAGGCAAACACAACTCTGGACCAAGGCCTCCAGGATCTTGCCAAATAAGTGTTCGGCCCGCCAGTGCCTGTAACGCTGCAATGCGCAAACACATACCCACTGGGGTCGGACGTTGCCTTCCCGAAGATGAAGTCCACAGTGCCTTCAATGATGCAATCCTTGTACACATGCATCCCGTCGTCGTCGCACAGGGTGTCTTGGAACCCTAG

Coding sequence (CDS)

ATGTTACACATTGGATTTCACTTCGCTCAAATCGCTCGATTTCAATTCAGAAACTACGTTCGAAGTACAGAGAAAAATTCTGCCGTTCACATCAACCTCCTCACCCTGTGCTTCAACGCTCAATCGCTTCGTCAAACCAAAGAAGTCCACGCCATTTGCCTTCTCAATGGCTTGCTTCCTCATAGTGTATCACTCTGTGCTTCCCTTATTCTTAATTACGCCAAGTTTCAACACCCAGAATCGTTCTGTACTCTGTTCCATCAAACTGTCCAGAATTGTCGTACTGCGTTCCTGTGGAATACCTTGATTCGCGCTCACTCCATTGCTGGGAATGGGACGCTTGATGGGTTGGAGACGTACAACAGGATGGTTCGATTCGGTGTTCAACTCGATGACCATACATTTCCTTTTGTTCTCAAGATATGTTCTGATTCGCTTGATATTTGCAAAGGTATGGAGGTTCATGGGGTTGTGTTTAAGTTGGGATTTGATTCTGATGTCTATGTTGGCAATACGCTGTTGATGCTGTATGGGAATTGTGGGTTCTTAAATGATGCTAAAAAGGTGTTCGATGAAATGTCTGAGAGAGATGTCGTCTCGTGGAATACGGTTATTGGGCTCCTTTCAGTTAATGGGGATTATAGGGAGGCTCGAAAAGAAATTCATGGGTTCAGTATGAGAATGGGAACAGAAACTGATCTTTTCACTGCCAATTCCCTGATCGATATGTATGCCAAGTCTGGTCATTCAACTGAGGCATCTAGCATATTCCACAGCATGGATAGAAGGAATATAGTTTCTTGGAACACTATGATCGCTAATTATGCGCTAAATGGGGTCGCGTTGGAAGCAATAAGATTTGTAATACTATTGCAAGAGAGTGGAGAACGCCCTAATGCAGTGACCTTTACCAATGTTCTTCCTGCTTGTGCACGATATTCTGAAACAAACGATTGCTTGGAGTCTCTGAATTTGTTCTCAGAAATGAGGCTGCTTGGTAAAAAGCCTGATGTCGTTTCCTTTATGGGGGTCATATCAGCTTGTGCAAACCTAGCCGCAGTCAAGCAAGGTAAAGAGATTCATGGTGTTGCATTAAGAAATCATCTTAACTCTCATCTATTTGTCTCAAACTCCCTATTGGACTTTTATACAAAATGTGGAAGAATTGATCTTGCTTGTAAGATCTTCAATCAAATTCTATTCAAAGATGTAGCATCTTGGAATACTATGATTTTAGGATATGGAATGATAGGAGAGTTGGAATCTGCAATTAATATGTTTGAAGCAATGAGGGATGATAAAGTGCAATATGATTTAGTTTCATATATTGCAGTTCTGTCAGCTTGTAGTCATGGAGGACTAGTTGAACGTGGTTGGCAATACTTCAGCGAGATGTTGGATCAACATCTTGAACCCACCGAAATGCACTATACATGTCTGGTTGATCTACTCGGCCGTGCTGGTTTCGTAGAAGAGGCAGCAGAGCTGATTCGGCGACTACCGATAGCGCCCGATTCAAATATTTGGGGAGCTCTACTTGGTGCTTGTCGAATTTACGGAAACGTTGAACTAGGGTGTAAGGCAGCAGAGCATTTATTTGAGCTAAAGCCTCAGCATTGTGGATACTATATTCTTCTTTCAAACATGTATGCAGAAACAGGAAGATGGGATGAGGTAAACAGGATTAGGGAACTTATGAAGTCTAGAGGAGCGAAAAAGAGCCCTGGCTGTAGTTGGGTTCAGATTCATGGCCAGCTGCACGCTTTTGTGGTTGATGATCGAGCAGAGGGATTTGAATTCTGGAATGGGACGCTTGATGGGTTGCAGACGTACAACAGGATGGTTCGACTCGGTGTTCAACTCGATGACCATACATTTCCTTTTGTTCTCAAGATATGTTCTGATTCGCTTGATATTTGCAAAGGTATGGAGGTTCATGGGGTTGTGTTTAAGTTGGGTTTTGATTCTGATGTCTATGTTGGCAATACGCTGCTGATGCTGTATGGGAATTGTGGGTTCTTAAATGATGCTACGAAGGTGTTCGATGAAATGTCTGAGAGAGATGTCGTCTCGTGGAATACGGTTATTGGGCTCCTTTCAGTTAATGGGGATTATAGGGAGGCTCGTAACTATTACTTTTGGATGACTTTGAGGTCCGGAATTCAACCAAATTTGCTTGAATGTTTCAAAGCAGGAAAAGAAATTCATGGGTTCAGTATGAGAATGGGAACAGAAACTGATCTTTTCACTGCCAATTCCCTGATCGATATGTATGCCAAGTCTGGTCATTCAACTGAGGCATCTAGCATATTCCACAGCATGGATAGAAGGAATATAGTTTCTTGGAACACTATGATCGCTAATTATGCGCTAAATGGGGTCGCGTTGGAAGCAATAAGATTTGTAATACTATTGCAAGAGAGTGGAGAACGCCCTAATGCAGTGACCTTTACCAATGTTCTTCCTGCTTGTGCACGATATTCTGAAACAAACGATTGCTTGGAGTCTCTGAATTTGTTCTCAGAAATGAGGCTGCTTGGTAAAAAGCCTGATGTCGTTTCCTTTATGGGGGTCATATCAGCTTGTGCAAACCTAGCCGCAGTCAAGCAAGGTAAAGAGATTCATGGTGTTGCATTAAGAAATCATCTTAACTCTCATCTATTTGTCTCAAACTCCCTATTGGACTTTTATACAAAATGTGGAAGAATTGATCTTGCTTGTAAGATCTTCAATCAAATTCTATTCAAAGATGTAGCATCTTGGAATACTATGATTTTAGGATATGGAATGATAGGAGAGTTGGAATCTGCAATTAATATGTTTGAAGCAATGAGGGATGATAAAGTGCAATATGATTTAGTTTCATATATTGCAGTTCTGTCAGCTTGTAGTCATGGAGGACTAGTTGAACGTGGTTGGCAATACTTCAGCGAGATGTTGGATCAACATCTTGAACCCACCGAAATGCACTATACATGTCTGGTTGATCTACTCGGCCGTGCTGGTTTCGTAGAAGAGGCAGCAGAGCTGATTCGGCGACTACCGATAGCGCCCGATTCAAATATTTGGGGAGCTCTACTTGGTGCTTGTCGAATTTACGGAAACGTTGAACTAGGGTGTAAGGCAGCAGAGCATTTATTTGAGCTAAAGCCTCAGCATTGTGGATACTATATTCTTCTTTCAAACATGTATGCAGAAACAGGAAGATGGGATGAGGTAAACAGGATTAGGGAACTTATGAAGTCTAGAGGAGCGAAAAAGAGCCCTGGCTGTAGTTGGGTTCAGATTCATGGCCAGCTGCACGCTTTTGTGGTTGATGATCGAGCAGAGGGATTTGAATTCTTTGGGAGGAGGAAGCAACCACTTTTGGGCCTGCACGTAATCAAGGTTGATGAAGGGTTTCGCTTGTGCTTCACTCAGCTGTTTGCTGAATTTTACACGCTTGCTCGTCTCCGCTCCCGGCCCCGAACACTTAAATTCTCCGAAGAAAACCGTCTTGTCAAAAGCGGGGTTGTTCATGTCGTCCCAGCCTTCAGGATGAAGGATGTCGGCAATGGTGGTGTAGGCAAACACAACTCTGGACCAAGGCCTCCAGGATCTTGCCAAATAAGTGTTCGGCCCGCCAGTGCCTGTAACGCTGCAATGCGCAAACACATACCCACTGGGGTCGGACGTTGCCTTCCCGAAGATGAAGTCCACAGTGCCTTCAATGATGCAATCCTTGTACACATGCATCCCGTCGTCGTCGCACAGGGTGTCTTGGAACCCTAG

Protein sequence

MLHIGFHFAQIARFQFRNYVRSTEKNSAVHINLLTLCFNAQSLRQTKEVHAICLLNGLLPHSVSLCASLILNYAKFQHPESFCTLFHQTVQNCRTAFLWNTLIRAHSIAGNGTLDGLETYNRMVRFGVQLDDHTFPFVLKICSDSLDICKGMEVHGVVFKLGFDSDVYVGNTLLMLYGNCGFLNDAKKVFDEMSERDVVSWNTVIGLLSVNGDYREARKEIHGFSMRMGTETDLFTANSLIDMYAKSGHSTEASSIFHSMDRRNIVSWNTMIANYALNGVALEAIRFVILLQESGERPNAVTFTNVLPACARYSETNDCLESLNLFSEMRLLGKKPDVVSFMGVISACANLAAVKQGKEIHGVALRNHLNSHLFVSNSLLDFYTKCGRIDLACKIFNQILFKDVASWNTMILGYGMIGELESAINMFEAMRDDKVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLDQHLEPTEMHYTCLVDLLGRAGFVEEAAELIRRLPIAPDSNIWGALLGACRIYGNVELGCKAAEHLFELKPQHCGYYILLSNMYAETGRWDEVNRIRELMKSRGAKKSPGCSWVQIHGQLHAFVVDDRAEGFEFWNGTLDGLQTYNRMVRLGVQLDDHTFPFVLKICSDSLDICKGMEVHGVVFKLGFDSDVYVGNTLLMLYGNCGFLNDATKVFDEMSERDVVSWNTVIGLLSVNGDYREARNYYFWMTLRSGIQPNLLECFKAGKEIHGFSMRMGTETDLFTANSLIDMYAKSGHSTEASSIFHSMDRRNIVSWNTMIANYALNGVALEAIRFVILLQESGERPNAVTFTNVLPACARYSETNDCLESLNLFSEMRLLGKKPDVVSFMGVISACANLAAVKQGKEIHGVALRNHLNSHLFVSNSLLDFYTKCGRIDLACKIFNQILFKDVASWNTMILGYGMIGELESAINMFEAMRDDKVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLDQHLEPTEMHYTCLVDLLGRAGFVEEAAELIRRLPIAPDSNIWGALLGACRIYGNVELGCKAAEHLFELKPQHCGYYILLSNMYAETGRWDEVNRIRELMKSRGAKKSPGCSWVQIHGQLHAFVVDDRAEGFEFFGRRKQPLLGLHVIKVDEGFRLCFTQLFAEFYTLARLRSRPRTLKFSEENRLVKSGVVHVVPAFRMKDVGNGGVGKHNSGPRPPGSCQISVRPASACNAAMRKHIPTGVGRCLPEDEVHSAFNDAILVHMHPVVVAQGVLEP

Homology

[Close]

BLAST of Cp4.1LG16g08460 vs. Swiss-Prot
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 2.1e-105
Identity = 204/539 (37.85%), Postives = 311/539 (57.70%), Query Frame = 1


Query: 601  WNGTLDGLQTYNR----------MVRLGVQLDDHTFPFVLKICSDSLDICKGMEVHGVVF 660
            WN  + G   ++R          M + G  L++++F  VL  CS   D+ KG++VH ++ 
Sbjct: 120  WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179

Query: 661  KLGFDSDVYVGNTLLMLYGNCGFLNDATKVFDEMSERDVVSWNTVIGLLSVNGDYREARN 720
            K  F SDVY+G+ L+ +Y  CG +NDA +VFDEM +R+VVSWN++I     NG   EA +
Sbjct: 180  KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239

Query: 721  YYFWMTLRSGIQPN------------LLECFKAGKEIHGFSMRMGT-ETDLFTANSLIDM 780
              F M L S ++P+             L   K G+E+HG  ++      D+  +N+ +DM
Sbjct: 240  V-FQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDM 299

Query: 781  YAKSGHSTEASSIFHSMDRRNIVSWNTMIANYALNGVALEAIRFVILLQESGERPNAVTF 840
            YAK     EA  IF SM  RN+++  +MI+ YA+   + +A R  ++  +  ER N V++
Sbjct: 300  YAKCSRIKEARFIFDSMPIRNVIAETSMISGYAM-AASTKAAR--LMFTKMAER-NVVSW 359

Query: 841  TNVLPACARYSETNDCLESLNLFSEMRLLGKKPDVVSFMGVISACANLAAVKQGKEIH-- 900
              ++   A Y++  +  E+L+LF  ++     P   SF  ++ ACA+LA +  G + H  
Sbjct: 360  NALI---AGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVH 419

Query: 901  ----GVALRNHLNSHLFVSNSLLDFYTKCGRIDLACKIFNQILFKDVASWNTMILGYGMI 960
                G   ++     +FV NSL+D Y KCG ++    +F +++ +D  SWN MI+G+   
Sbjct: 420  VLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN 479

Query: 961  GELESAINMFEAMRDDKVQYDLVSYIAVLSACSHGGLVERGWQYFSEML-DQHLEPTEMH 1020
            G    A+ +F  M +   + D ++ I VLSAC H G VE G  YFS M  D  + P   H
Sbjct: 480  GYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDH 539

Query: 1021 YTCLVDLLGRAGFVEEAAELIRRLPIAPDSNIWGALLGACRIYGNVELGCKAAEHLFELK 1080
            YTC+VDLLGRAGF+EEA  +I  +P+ PDS IWG+LL AC+++ N+ LG   AE L E++
Sbjct: 540  YTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVE 599

Query: 1081 PQHCGYYILLSNMYAETGRWDEVNRIRELMKSRGAKKSPGCSWVQIHGQLHAFVVDDRA 1110
            P + G Y+LLSNMYAE G+W++V  +R+ M+  G  K PGCSW++I G  H F+V D++
Sbjct: 600  PSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKS 650

[Close]

BLAST of Cp4.1LG16g08460 vs. Swiss-Prot
Match: PPR53_ARATH (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2)

HSP 1 Score: 361.3 bits (926), Expect = 4.3e-98
Identity = 184/547 (33.64%), Postives = 306/547 (55.94%), Query Frame = 1


Query: 611  YNRMVRLGVQLDDHTFPFVLKICSDSLDICKGMEVHGVVFKLGFDSDVYVGNTLLMLYGN 670
            ++RM   G+  D H  P + K+C++      G ++H V    G D D +V  ++  +Y  
Sbjct: 104  FSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMR 163

Query: 671  CGFLNDATKVFDEMSERDVV-----------------------------------SWNTV 730
            CG + DA KVFD MS++DVV                                   SWN +
Sbjct: 164  CGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGI 223

Query: 731  IGLLSVNGDYREARNYYFWMTLRSGIQPNLL------------ECFKAGKEIHGFSMRMG 790
            +   + +G ++EA    F      G  P+ +            E    G+ IHG+ ++ G
Sbjct: 224  LSGFNRSGYHKEAV-VMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQG 283

Query: 791  TETDLFTANSLIDMYAKSGHSTEASSIFHSMDRRNIVSWNTMIANYALNGVALEAIRFVI 850
               D    +++IDMY KSGH     S+F+  +       N  I   + NG+  +A+    
Sbjct: 284  LLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFE 343

Query: 851  LLQESGERPNAVTFTNVLPACARYSETNDCLESLNLFSEMRLLGKKPDVVSFMGVISACA 910
            L +E     N V++T+++  CA+  +    +E+L LF EM++ G KP+ V+   ++ AC 
Sbjct: 344  LFKEQTMELNVVSWTSIIAGCAQNGKD---IEALELFREMQVAGVKPNHVTIPSMLPACG 403

Query: 911  NLAAVKQGKEIHGVALRNHLNSHLFVSNSLLDFYTKCGRIDLACKIFNQILFKDVASWNT 970
            N+AA+  G+  HG A+R HL  ++ V ++L+D Y KCGRI+L+  +FN +  K++  WN+
Sbjct: 404  NIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNS 463

Query: 971  MILGYGMIGELESAINMFEAMRDDKVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLDQH 1030
            ++ G+ M G+ +  +++FE++   +++ D +S+ ++LSAC   GL + GW+YF  M +++
Sbjct: 464  LMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEY 523

Query: 1031 -LEPTEMHYTCLVDLLGRAGFVEEAAELIRRLPIAPDSNIWGALLGACRIYGNVELGCKA 1090
             ++P   HY+C+V+LLGRAG ++EA +LI+ +P  PDS +WGALL +CR+  NV+L   A
Sbjct: 524  GIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIA 583

Query: 1091 AEHLFELKPQHCGYYILLSNMYAETGRWDEVNRIRELMKSRGAKKSPGCSWVQIHGQLHA 1110
            AE LF L+P++ G Y+LLSN+YA  G W EV+ IR  M+S G KK+PGCSW+Q+  +++ 
Sbjct: 584  AEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYT 643

[Close]

BLAST of Cp4.1LG16g08460 vs. Swiss-Prot
Match: PP207_ARATH (Pentatricopeptide repeat-containing protein At3g02330 OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2)

HSP 1 Score: 354.4 bits (908), Expect = 5.2e-96
Identity = 237/851 (27.85%), Postives = 402/851 (47.24%), Query Frame = 1


Query: 322  SLNLFSEMRLLGKKPDVVSFMGVISACANLAAVKQGKEIHG---------------VALR 381
            S + F++           +F  V   CA   A++ GK+ H                  L+
Sbjct: 32   SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91

Query: 382  NHLNSHLFVS----------------NSLLDFYTKCGRIDLACKIFNQILFKDVASWNTM 441
             + NS  FVS                N +++ Y+K   +  A   FN +  +DV SWN+M
Sbjct: 92   VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151

Query: 442  ILGYGMIGELESAINMFEAMRDDKVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLDQHL 501
            + GY   GE   +I +F  M  + +++D  ++  +L  CS       G Q    ++    
Sbjct: 152  LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC 211

Query: 502  EPTEMHYTCLVDLLGRAGFVEEAAELIRRLPIAPDSNIWGALLGACRIYGNVELGCKAAE 561
            +   +  + L+D+  +     E+  + + +P   +S  W A++  C     + L  K  +
Sbjct: 212  DTDVVAASALLDMYAKGKRFVESLRVFQGIP-EKNSVSWSAIIAGCVQNNLLSLALKFFK 271

Query: 562  HLFELKP--QHCGYYILLSNMYA----ETGRWDEVNRIRELMKSRGAKKSPGCS-WVQIH 621
             + ++        Y  +L +  A      G     + ++    + G  ++     + +  
Sbjct: 272  EMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCD 331

Query: 622  GQLHAFVVDDRAEGF--EFWNGTLDG----------LQTYNRMVRLGVQLDDHTFPFVLK 681
                A ++ D +E    + +N  + G          L  ++R++  G+  D+ +   V +
Sbjct: 332  NMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFR 391

Query: 682  ICSDSLDICKGMEVHGVVFKLGFDSDVYVGNTLLMLYGNCGFLNDATKVFDEMSERDVVS 741
             C+    + +G++++G+  K     DV V N  + +YG C  L +A +VFDEM  RD VS
Sbjct: 392  ACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS 451

Query: 742  WNTVIGLLSVNGDYREARNYYFWMTLRSGIQPN-------LLECFKA----GKEIHGFSM 801
            WN +I     NG   E   + F   LRS I+P+       L  C       G EIH   +
Sbjct: 452  WNAIIAAHEQNGKGYETL-FLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIV 511

Query: 802  RMGTETDLFTANSLIDMYAKSGHSTEASSIFHSMDRRNIVSWNTMIANYALNGVALEAIR 861
            + G  ++     SLIDMY+K G   EA  I     +R  VS  TM     ++   L+ + 
Sbjct: 512  KSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS-GTMEELEKMHNKRLQEM- 571

Query: 862  FVILLQESGERPNAVTFTNVLPACARYSETNDCLESLNLFSEMRLLGKKPDVVSFMGVIS 921
                          V++ +++       ++ D   +  LF+ M  +G  PD  ++  V+ 
Sbjct: 572  -------------CVSWNSIISGYVMKEQSED---AQMLFTRMMEMGITPDKFTYATVLD 631

Query: 922  ACANLAAVKQGKEIHGVALRNHLNSHLFVSNSLLDFYTKCGRIDLACKIFNQILFKDVAS 981
             CANLA+   GK+IH   ++  L S +++ ++L+D Y+KCG +  +  +F + L +D  +
Sbjct: 632  TCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVT 691

Query: 982  WNTMILGYGMIGELESAINMFEAMRDDKVQYDLVSYIAVLSACSHGGLVERGWQYFSEM- 1041
            WN MI GY   G+ E AI +FE M  + ++ + V++I++L AC+H GL+++G +YF  M 
Sbjct: 692  WNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMK 751

Query: 1042 LDQHLEPTEMHYTCLVDLLGRAGFVEEAAELIRRLPIAPDSNIWGALLGACRIY-GNVEL 1101
             D  L+P   HY+ +VD+LG++G V+ A ELIR +P   D  IW  LLG C I+  NVE+
Sbjct: 752  RDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEV 811

Query: 1102 GCKAAEHLFELKPQHCGYYILLSNMYAETGRWDEVNRIRELMKSRGAKKSPGCSWVQIHG 1110
              +A   L  L PQ    Y LLSN+YA+ G W++V+ +R  M+    KK PGCSWV++  
Sbjct: 812  AEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKD 862

[Close]

BLAST of Cp4.1LG16g08460 vs. Swiss-Prot
Match: PP261_ARATH (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 9.8e-95
Identity = 202/557 (36.27%), Postives = 310/557 (55.66%), Query Frame = 1


Query: 42  SLRQTKEVHAICLLNGLLPHSVSLCASLILNYAKFQHPESFCTLFHQTVQNCRTAFLWNT 101
           +L Q K++HA  +   L    + +   LI   +  +       +F+Q  +      L N+
Sbjct: 31  NLNQVKQLHAQIIRRNL-HEDLHIAPKLISALSLCRQTNLAVRVFNQVQEP--NVHLCNS 90

Query: 102 LIRAHSIAGNGTLDGLETYNRMVRFGVQLDDHTFPFVLKICSDSLDICKGMEVHGVVFKL 161
           LIRAH+   +        ++ M RFG+  D+ T+PF+LK CS    +     +H  + KL
Sbjct: 91  LIRAHA-QNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKL 150

Query: 162 GFDSDVYVGNTLLMLYGNCGFLN--DAKKVFDEMSERDVVSWNTVIGLLSVNGDYREARK 221
           G  SD+YV N L+  Y  CG L   DA K+F++MSERD VSWN+++G L   G+ R+AR+
Sbjct: 151 GLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARR 210

Query: 222 EIHGFSMRMGTETDLFTANSLIDMYAKSGHSTEASSIFHSMDRRNIVSWNTMIANYALNG 281
                  R     DL + N+++D YA+    ++A  +F  M  RN VSW+TM+  Y+  G
Sbjct: 211 LFDEMPQR-----DLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAG 270

Query: 282 VALEAIRFVILLQESGERPNAVTFTNVLPACARYSETNDCLESLNLFSEMRLLGKKPDVV 341
             +E  R V+  +      N VT+T ++   A Y+E     E+  L  +M   G K D  
Sbjct: 271 -DMEMAR-VMFDKMPLPAKNVVTWTIII---AGYAEKGLLKEADRLVDQMVASGLKFDAA 330

Query: 342 SFMGVISACANLAAVKQGKEIHGVALRNHLNSHLFVSNSLLDFYTKCGRIDLACKIFNQI 401
           + + +++AC     +  G  IH +  R++L S+ +V N+LLD Y KCG +  A  +FN I
Sbjct: 331 AVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDI 390

Query: 402 LFKDVASWNTMILGYGMIGELESAINMFEAMRDDKVQYDLVSYIAVLSACSHGGLVERGW 461
             KD+ SWNTM+ G G+ G  + AI +F  MR + ++ D V++IAVL +C+H GL++ G 
Sbjct: 391 PKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGI 450

Query: 462 QYFSEMLDQH-LEPTEMHYTCLVDLLGRAGFVEEAAELIRRLPIAPDSNIWGALLGACRI 521
            YF  M   + L P   HY CLVDLLGR G ++EA ++++ +P+ P+  IWGALLGACR+
Sbjct: 451 DYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRM 510

Query: 522 YGNVELGCKAAEHLFELKPQHCGYYILLSNMYAETGRWDEVNRIRELMKSRGAKKSPGCS 581
           +  V++  +  ++L +L P   G Y LLSN+YA    W+ V  IR  MKS G +K  G S
Sbjct: 511 HNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGAS 570

Query: 582 WVQIHGQLHAFVVDDRA 596
            V++   +H F V D++
Sbjct: 571 SVELEDGIHEFTVFDKS 573

[Close]

BLAST of Cp4.1LG16g08460 vs. Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 8.3e-94
Identity = 213/678 (31.42%), Postives = 359/678 (52.95%), Query Frame = 1


Query: 26  NSAVHINLLTLCFNAQSLRQTKEVHAICLLNGLLPHSV-----SLCASLILNYAKFQHPE 85
           +S V ++  T    ++S    + VH    L+G +  S      S+  SL+  Y K Q  +
Sbjct: 188 SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD 247

Query: 86  SFCTLFHQTVQNCRTAFLWNTLIRAHSIAGNGTLD-GLETYNRMVRFGVQLDDHTFPFVL 145
           S   +F +  +  R    WN++I  +    NG  + GL  + +M+  G+++D  T   V 
Sbjct: 248 SARKVFDEMTE--RDVISWNSIINGY--VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 307

Query: 146 KICSDSLDICKGMEVHGVVFKLGFDSDVYVGNTLLMLYGNCGFLNDAKKVFDEMSERDVV 205
             C+DS  I  G  VH +  K  F  +    NTLL +Y  CG L+ AK VF EMS+R VV
Sbjct: 308 AGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVV 367

Query: 206 SWNTVIGLLSVNGDYREARKEIHGFSMRMGTETDLFTANSLIDMYAKSGHSTEASSIFHS 265
           S+ ++I   +  G   EA K         G   D++T  ++++  A+     E   + H 
Sbjct: 368 SYTSMIAGYAREGLAGEAVKLFEEMEEE-GISPDVYTVTAVLNCCARYRLLDEGKRV-HE 427

Query: 266 MDRRNIVSWNTMIANYALNGVA-LEAIRFVILLQESGERPNAVTFTNVLPACARYSETND 325
             + N + ++  ++N  ++  A   +++   L+       + +++  ++   ++    N+
Sbjct: 428 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 487

Query: 326 CLESLNLFSEMRLLGKKPDVVSFMGVISACANLAAVKQGKEIHGVALRNHLNSHLFVSNS 385
            L   NL  E +     PD  +   V+ ACA+L+A  +G+EIHG  +RN   S   V+NS
Sbjct: 488 ALSLFNLLLEEKRFS--PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 547

Query: 386 LLDFYTKCGRIDLACKIFNQILFKDVASWNTMILGYGMIGELESAINMFEAMRDDKVQYD 445
           L+D Y KCG + LA  +F+ I  KD+ SW  MI GYGM G  + AI +F  MR   ++ D
Sbjct: 548 LVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEAD 607

Query: 446 LVSYIAVLSACSHGGLVERGWQYFSEMLDQ-HLEPTEMHYTCLVDLLGRAGFVEEAAELI 505
            +S++++L ACSH GLV+ GW++F+ M  +  +EPT  HY C+VD+L R G + +A   I
Sbjct: 608 EISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFI 667

Query: 506 RRLPIAPDSNIWGALLGACRIYGNVELGCKAAEHLFELKPQHCGYYILLSNMYAETGRWD 565
             +PI PD+ IWGALL  CRI+ +V+L  K AE +FEL+P++ GYY+L++N+YAE  +W+
Sbjct: 668 ENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWE 727

Query: 566 EVNRIRELMKSRGAKKSPGCSWVQIHGQLHAFVVDDRAEGFEFWNGTLDGLQTYNRMVRL 625
           +V R+R+ +  RG +K+PGCSW++I G+++ FV  D +      N   + ++ + R VR 
Sbjct: 728 QVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSS------NPETENIEAFLRKVRA 787

Query: 626 GVQLDDHTFPFVLKICSDSLDICKGMEVHGVVFKLGFDSDVYVG--NTLLMLYGN---CG 685
            + +++   P       D+ ++ K   + G   KL     +       ++ +  N   CG
Sbjct: 788 RM-IEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCG 847

Query: 686 FLNDATKVFDEMSERDVV 691
             ++  K   +++ R++V
Sbjct: 848 DCHEMAKFMSKLTRREIV 850

[Close]

BLAST of Cp4.1LG16g08460 vs. TrEMBL
Match: A0A0A0KEH6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G428560 PE=4 SV=1)

HSP 1 Score: 631.3 bits (1627), Expect = 2.5e-177
Identity = 337/634 (53.15%), Postives = 421/634 (66.40%), Query Frame = 1


Query: 1   MLHIGFHFAQIARFQFRNYVRSTEKNSAVH-INLLTLCFNAQSLRQTKEVHAICLLNGLL 60
           +L +   + +   + F   +RS  K + V  I+LL +    +    T+ +H   +  GL 
Sbjct: 234 LLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGL- 293

Query: 61  PHSVSLCASLILNYAKFQHPESFCTLFHQTVQNCRTAFLWNTLIRAHSIAGNGTLDGLET 120
              V+ C +L+  Y K    ++   +F++TV+    +  WN++I   +  G    D L  
Sbjct: 294 DSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS--WNSIINGLACKGR-CWDALNA 353

Query: 121 YNRMVRFGVQLDDHTFPFVLKICSDSLDICKGMEVHGVVFKLGFDSDVYVGNTLLMLYGN 180
           +  M+  G Q +  T   +L +  +      G E+HG   ++G ++D+++ N+L+ +Y  
Sbjct: 354 FRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAK 413

Query: 181 CGFLNDAKKVFDEMSERDVVSWNTVIGLLSVNGDYREA---------------------- 240
            G   +A  +F  +  R++VSWN +I   ++N    EA                      
Sbjct: 414 SGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNV 473

Query: 241 ------------RKEIHGFSMRMGTETDLFTANSLIDMYAKSGHSTEASSIFHSMDRRNI 300
                        KEIH   +R+G  +DLF +NSLIDMYAK G         HS   RN+
Sbjct: 474 LPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCG-------CLHSA--RNV 533

Query: 301 VSWNTMIANYALNGVALEAIRFVILLQESGERPNAVTFTNVLPACARYSETNDCLESLNL 360
             +NT                          R + V++ N+L     YSET+DCL+SLNL
Sbjct: 534 --FNT-------------------------SRKDEVSY-NIL--IIGYSETDDCLQSLNL 593

Query: 361 FSEMRLLGKKPDVVSFMGVISACANLAAVKQGKEIHGVALRNHLNSHLFVSNSLLDFYTK 420
           FSEMRLLGKKPDVVSF+GVISACANLAA+KQGKE+HGVALRNHL SHLFVSNSLLDFYTK
Sbjct: 594 FSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTK 653

Query: 421 CGRIDLACKIFNQILFKDVASWNTMILGYGMIGELESAINMFEAMRDDKVQYDLVSYIAV 480
           CGRID+AC++FNQILFKDVASWNTMILGYGMIGELE+AI+MFEAMRDD VQYDLVSYIAV
Sbjct: 654 CGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAV 713

Query: 481 LSACSHGGLVERGWQYFSEMLDQHLEPTEMHYTCLVDLLGRAGFVEEAAELIRRLPIAPD 540
           LSACSHGGLVERGWQYFSEML Q LEPTEMHYTC+VDLLGRAGFVEEAA+LI++LPIAPD
Sbjct: 714 LSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPD 773

Query: 541 SNIWGALLGACRIYGNVELGCKAAEHLFELKPQHCGYYILLSNMYAETGRWDEVNRIREL 600
           +NIWGALLGACRIYGNVELG +AAEHLFELKPQHCGYYILLSN+YAETGRWDE N+IREL
Sbjct: 774 ANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIREL 824

[Close]

BLAST of Cp4.1LG16g08460 vs. TrEMBL
Match: A0A151T0A3_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_022898 PE=4 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 3.2e-169
Identity = 294/470 (62.55%), Postives = 363/470 (77.23%), Query Frame = 1


Query: 656  SDVYVGNTLLMLYGNCGFLNDATKVFDEMSERDVVSWNTVIGLLSVNGDYREARNYYFWM 715
            S V VGN L+ +YG CG    + KVFDE+ ER+VVSWN++I   S  G Y +A +  F +
Sbjct: 118  SHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVVSWNSIITSFSFRGKYMDALDV-FRL 177

Query: 716  TLRSGIQPNL------------LECFKAGKEIHGFSMRMGTETDLFTANSLIDMYAKSGH 775
             + +G++PN             L  FK G EIHGFS+RM  E+D+F ANSLID+YAKSG 
Sbjct: 178  MIGTGMRPNSVTISSMLPVLGELGLFKWGMEIHGFSLRMAIESDIFIANSLIDIYAKSGS 237

Query: 776  STEASSIFHSMDRRNIVSWNTMIANYALNGVALEAIRFVILLQESGERPNAVTFTNVLPA 835
            S  AS IF+ M+ R+IVSWN MIAN+A N +  EA+  V  +Q  GE PN VTFTNVLPA
Sbjct: 238  SRIASIIFNKMEGRSIVSWNAMIANFAQNRLEFEAVELVRQMQAKGETPNNVTFTNVLPA 297

Query: 836  CARYSETNDCLESLNLFSEMRLLGKKPDVVSFMGVISACANLAAVKQGKEIHGVALRNHL 895
            C  YS TNDC ES++LFSEM LLG  PD+VSFMGVISACANLA+++QGKE+HG+ +R   
Sbjct: 298  C--YSRTNDCSESISLFSEMILLGMLPDIVSFMGVISACANLASIRQGKEVHGLLMRKLF 357

Query: 896  NSHLFVSNSLLDFYTKCGRIDLACKIFNQILFKDVASWNTMILGYGMIGELESAINMFEA 955
            ++HLFV+NSLLD YT+CGRIDLA K+F++I  KDVASWNTMILGYGM+GELE+AIN+FEA
Sbjct: 358  HTHLFVANSLLDLYTRCGRIDLATKVFDRIQNKDVASWNTMILGYGMLGELETAINLFEA 417

Query: 956  MRDDKVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLDQHLEPTEMHYTCLVDLLGRAGF 1015
            M++D V+YD VS+IAVLSACSHGGL+E+G +YF  M D ++EP   HY C+VDLLGRAG 
Sbjct: 418  MKEDGVEYDSVSFIAVLSACSHGGLIEKGRKYFKMMHDLNIEPAHTHYACMVDLLGRAGL 477

Query: 1016 VEEAAELIRRLPIAPDSNIWGALLGACRIYGNVELGCKAAEHLFELKPQHCGYYILLSNM 1075
            + EAA+LIR L I PD+NIWGALLGACRI+GN+ELG  AAEHLF+LKPQH GYYILLSNM
Sbjct: 478  MREAADLIRGLSIVPDTNIWGALLGACRIHGNIELGHWAAEHLFKLKPQHSGYYILLSNM 537

Query: 1076 YAETGRWDEVNRIRELMKSRGAKKSPGCSWVQIHGQLHAFVVDDRAEGFE 1114
            YAE  RWDE N++RELMKSRGAKK+PGCSWVQ   Q+HAF+V ++ +  +
Sbjct: 538  YAEAERWDEANKVRELMKSRGAKKNPGCSWVQTGDQVHAFLVGEKIDSLD 584

[Close]

BLAST of Cp4.1LG16g08460 vs. TrEMBL
Match: M5W843_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015109mg PE=4 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 3.3e-158
Identity = 287/514 (55.84%), Postives = 356/514 (69.26%), Query Frame = 1


Query: 611  YNRMVRLGVQLDDHTFPF--VLKICSDSLDICKGMEVHGVVFKLGFDSDVYVGNTLLMLY 670
            Y R + LG+    +      VL +C++  D    +++H  V K G D  V  GN L+ +Y
Sbjct: 28   YYREMNLGIGFKPNLVSVISVLPVCAELEDERMAIQIHCYVVKAGLDLLVTTGNALVDVY 87

Query: 671  GNCGFLNDATKVFDEMSERDVVSWNTVIGLLSVNGDYREARNYYFWMTLRSGIQPNL--- 730
            G CG  N + +VF E+ +++ VSWN  I  LS  G   EA   + WM +  G++PN    
Sbjct: 88   GKCGNANASKQVFGEIIQKNEVSWNAAITSLSYMGHNIEALATFRWM-IDEGVKPNSVTI 147

Query: 731  ---------LECFKAGKEIHGFSMRMGTETDLFTANSLIDMYAKSGHSTEASSIFHSMDR 790
                     L  F  G+ +HGFS+RMG E+D+F ANSLIDMYAKSG S EAS++F  MD+
Sbjct: 148  SSMIPVLVELAFFGVGRRLHGFSIRMGIESDVFIANSLIDMYAKSGRSNEASNVFQEMDK 207

Query: 791  RNIVSWNTMIANYALNGVALEAIRFVILLQESGERPNAVTFTNVLPACARYSETNDCLES 850
            RNIVSWN MIAN+  N + LEAI  V  +Q                            ES
Sbjct: 208  RNIVSWNAMIANFGQNRLELEAIGLVRQMQGH--------------------------ES 267

Query: 851  LNLFSEMRLLGKKPDVVSFMGVISACANLAAVKQGKEIHGVALRNHLNSHLFVSNSLLDF 910
            LNLFSEM+L+G   D+VSF+GVISACAN+ A+KQGKEIHG  +R   ++HLFV+NSLLDF
Sbjct: 268  LNLFSEMKLVGMIHDIVSFVGVISACANVTAIKQGKEIHGSLVRKLFHTHLFVANSLLDF 327

Query: 911  YTKCGRIDLACKIFNQILFKDVASWNTMILGYGMIGELESAINMFEAMRDDKVQYDLVSY 970
            YTKCGRIDLA K+F++I  KDVASWNTMILGYGM+GEL +AI++FEAMR+D V+YD VSY
Sbjct: 328  YTKCGRIDLAAKVFDRIPSKDVASWNTMILGYGMLGELNTAISLFEAMREDGVEYDSVSY 387

Query: 971  IAVLSACSHGGLVERGWQYFSEMLDQHLEPTEMHYTCLVDLLGRAGFVEEAAELIRRLPI 1030
            IAVLS+CSHGGLVE+G +YF  M   ++EPTE HY C+VDLLGRAG +EEA ELI+ +PI
Sbjct: 388  IAVLSSCSHGGLVEKGKKYFEGMQALNIEPTEKHYACMVDLLGRAGLMEEAVELIKGMPI 447

Query: 1031 APDSNIWGALLGACRIYGNVELGCKAAEHLFELKPQHCGYYILLSNMYAETGRWDEVNRI 1090
             PD+NIWGALLGACRI+GNVEL   AA+HLF L P+HCGYYILLSNMYAE GRWDEVNR+
Sbjct: 448  VPDANIWGALLGACRIHGNVELASWAADHLFRLNPEHCGYYILLSNMYAEAGRWDEVNRV 507

Query: 1091 RELMKSRGAKKSPGCSWVQIHGQLHAFVVDDRAE 1111
            RELMKSRG KK+  CSWVQ+  Q+HAF V +  E
Sbjct: 508  RELMKSRGVKKNRACSWVQVQDQVHAFAVGESLE 514

[Close]

BLAST of Cp4.1LG16g08460 vs. TrEMBL
Match: A0A072UUM5_MEDTR (Pentatricopeptide (PPR) repeat protein OS=Medicago truncatula GN=MTR_3g045450 PE=4 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 2.0e-150
Identity = 318/827 (38.45%), Postives = 450/827 (54.41%), Query Frame = 1


Query: 340  SFMGVISACANLAAVKQGKEIHGVALRNHLNSH-LFVSNSLLDFYTKCGRIDLACKIFNQ 399
            S   ++  C +   + Q  ++H  ++ N    H + +S SL+  Y      + +  +F  
Sbjct: 33   SSSNLLHLCTHSQTLSQTNQLHAFSILNAFLPHSVSISASLILKYASFRHPETSLILFQN 92

Query: 400  IL--FKDVASWNTMILGYGMIGELESAINMFEAMRDDKVQYDLVSYIAVLSAC------- 459
             L   K    WNT+I  Y + G  +    ++  M    V+ D  +Y  VL AC       
Sbjct: 93   TLPFSKTAFLWNTLIRAYSIAGFFDG-FGVYNTMVRSGVKPDDHTYPFVLKACSDYLKFD 152

Query: 460  ----SHGGLVERGWQ-----------------YFSEML---DQHLEPTEMHYTCLVDLLG 519
                 HG + + G+                  +F + +   D+  E  ++ +  ++ L  
Sbjct: 153  KGREVHGVVFKVGFDKDVFVGNTLLMFYGNCGFFVDAMNVFDEMFERDKVSWNTVIGLCS 212

Query: 520  RAGFVEEAAELIRRLPIA-----PDSNIWGALLGACRIYGNVELGCKAAEHLFELKPQ-H 579
              GF EE+    + + +A     PD     ++L  C    NV +      ++F++    H
Sbjct: 213  DRGFHEESLCFFKEMVVAAPVVRPDLVTVVSVLPVCADSENVVMARIVHGYVFKVGLSGH 272

Query: 580  CGYYILLSNMYAETGRWDEVNRIRELMKSRGAKKSPGCSWVQIHGQLHAFVVDDRAEGFE 639
                  L ++Y + G  +   ++ + M  R        SW  +              GF 
Sbjct: 273  VKVGNALVDVYGKCGSEEACKKVFDEMDERNE-----VSWNAV------------ITGFS 332

Query: 640  FWNGTLDGLQTYNRMVRLGVQLDDHTFPFVLKICSDSLDICKGMEVHGVVFKLGFDSDVY 699
            F   ++D L  +  M+  G++ +  T   +L +  +      GMEVHG   ++G +SD++
Sbjct: 333  FRGLSMDALDAFRSMINTGMRPNPVTISSMLPVLGELGLFKLGMEVHGYSLRMGIESDIF 392

Query: 700  VGNTLLMLYGNCGFLNDATKVFDEMSERDVVSWNTVIGLLSVNGDYREARNYYFWMTLRS 759
            +GN+L+ +Y   G    A+ +F++M +R++VSWN+++   + N  +  A      M    
Sbjct: 393  IGNSLIDMYAKSGSSRVASTIFNKMGDRNIVSWNSMVANFAQNRHHFAAVELLRQMQAH- 452

Query: 760  GIQPN-------LLECFK-----AGKEIHGFSMRMGTETDLFTANSLIDMYAKSGHSTEA 819
            G  PN       L  C +      GKEIH   ++ G  TDLF +N+L DMY+K GH    
Sbjct: 453  GENPNNVTFTNVLPACARLGFLNVGKEIHARIIQTGCATDLFLSNALTDMYSKCGH---- 512

Query: 820  SSIFHSMDRRNIVSWNTMIANYALNGVALEAIRFVILLQESGERPNAVTFTNVLPACARY 879
                              +A    N    + + + IL+                     Y
Sbjct: 513  ----------------LSLARNVFNVSIKDKVSYNILI-------------------IGY 572

Query: 880  SETNDCLESLNLFSEMRLLGKKPDVVSFMGVISACANLAAVKQGKEIHGVALRNHLNSHL 939
            S+T +  ESLNLFSEMRL G  PD+VSF+G+ISACA+L+++KQGKEIHG  +R   ++HL
Sbjct: 573  SQTTNSSESLNLFSEMRLSGMTPDIVSFIGIISACAHLSSIKQGKEIHGHLVRKLFHTHL 632

Query: 940  FVSNSLLDFYTKCGRIDLACKIFNQILFKDVASWNTMILGYGMIGELESAINMFEAMRDD 999
            F +NSLLD YTKCGRIDLA K+F++I  KDVASWNTMILGYGM GE E+AIN+FEAM++D
Sbjct: 633  FAANSLLDLYTKCGRIDLATKVFDRIQHKDVASWNTMILGYGMRGEFETAINLFEAMKED 692

Query: 1000 K-VQYDLVSYIAVLSACSHGGLVERGWQYFSEMLDQHLEPTEMHYTCLVDLLGRAGFVEE 1059
              V+YD VSYIAVLSACSHGGL+E+G +YF +M D ++EPT  HY C+VDLLGRAG +EE
Sbjct: 693  GGVEYDSVSYIAVLSACSHGGLIEKGNKYFKQMQDYNIEPTHTHYACMVDLLGRAGQIEE 752

Query: 1060 AAELIRRLPIAPDSNIWGALLGACRIYGNVELGCKAAEHLFELKPQHCGYYILLSNMYAE 1114
            AA LIR L   PD+NIWGALLGACRIYGNVELG  AAEHLF+LKP HCGYYILLSNMYAE
Sbjct: 753  AANLIRGLSFEPDANIWGALLGACRIYGNVELGHWAAEHLFKLKPDHCGYYILLSNMYAE 801

[Close]

BLAST of Cp4.1LG16g08460 vs. TrEMBL
Match: A0A0D2QBB4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G076800 PE=4 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 1.1e-145
Identity = 308/800 (38.50%), Postives = 433/800 (54.12%), Query Frame = 1


Query: 324  NLFSEMRLLGKKPDVVSFMGVISACANLAAVKQGKEIHGVALRNHLNSHLFVSNSLLDFY 383
            ++++ M   G KPDV +F  ++ ACA++   K+G EIHG  ++    + + V N+LL FY
Sbjct: 101  HVYNTMLRTGIKPDVHTFPFLLKACADVFCFKKGVEIHGSVIKTGFGADVSVGNTLLLFY 160

Query: 384  TKCGRIDLACKIFNQILFKDVASWNTMILGYGMIGELESAINMFEAMRDDKVQYDLVSYI 443
              CG                                L     +F+ MR+     D+VS+ 
Sbjct: 161  GNCGG-------------------------------LRETRKVFDEMRER----DVVSWN 220

Query: 444  AVLSACSHGGLVERGWQYFSEM-LDQHLEPTEMHYTCLVDLLGRAGFVEEAAELIRRLPI 503
             VL   S  G       +FS M     ++P  + +  L+ + GR G     A+       
Sbjct: 221  TVLGVFSVNGFYLEALNFFSLMNFSSGMKPNMVTFVTLLPVCGRIGDKRLVAQ------- 280

Query: 504  APDSNIWGALLGACRIYGNVELGCKAAEHLFELKPQHCGYYILLSNMYAETGRWDEVNRI 563
                 I G+++   ++  N E+    A                L + Y +    D+  R+
Sbjct: 281  -----IHGSVV---KVGFNFEVSIGNA----------------LVDAYGKCWNSDDSKRV 340

Query: 564  RELMKSRGAKKSPGCSWVQIHGQLHAFVVDDRAEGFEFWNGTLDGLQTYNRMVRLGVQLD 623
             + M  +      G SW  I   L A++  +R           D L  +  M+ +G++ D
Sbjct: 341  FDEMVDKN-----GVSWNAIITSL-AYMGLNR-----------DALDMFRLMMDVGLKPD 400

Query: 624  DHTFPFVLKICSDSLDICKGMEVHGVVFKLGFDSDVYVGNTLLMLYGNCGFLNDATKVFD 683
              T   ++ +  +        E+HG   + G + DV++ NTL+ +Y   G  + A+ VF 
Sbjct: 401  SFTISSMIALLVELEFFNLAKEIHGFSLRFGIEHDVFISNTLIDMYAKSGHPSAASNVFH 460

Query: 684  EMS-ERDVVSWNTVIGLLSVNGDYREARNYYFWMTLRSGIQPNL-----------LECFK 743
             M+  R+VVSWN ++   + N     A      M     +  ++           +   +
Sbjct: 461  HMNVRRNVVSWNAMVANFAQNRLELAAIELLREMQAHGEVPDSITLTNVLPACGQVGFLR 520

Query: 744  AGKEIHGFSMRMGTETDLFTANSLIDMYAKSGHSTEASSIFHSMDRRNIVSWNTMIANYA 803
             GKEIHG ++R+G+  DLF +N+L DMYAK G+                      +A   
Sbjct: 521  NGKEIHGRTIRLGSNHDLFVSNALTDMYAKCGYLN--------------------LAQNV 580

Query: 804  LNGVALEAIRFVILLQESGERPNAVTFTNVLPACARYSETNDCLESLNLFSEMRLLGKKP 863
             N    + I + IL+                     YS+T++  +S+ LFSEM L+G K 
Sbjct: 581  FNNSVKDEISYNILI-------------------VGYSQTSEWTKSVGLFSEMGLIGLKH 640

Query: 864  DVVSFMGVISACANLAAVKQGKEIHGVALRNHLNSHLFVSNSLLDFYTKCGRIDLACKIF 923
            DVVSFMGV+SACAN AA KQGKEIHG+A+R H ++HLFV+NSLLDFYT CG ID A K+F
Sbjct: 641  DVVSFMGVVSACANQAAFKQGKEIHGLAVRKHFHTHLFVANSLLDFYTTCGEIDTARKLF 700

Query: 924  NQILFKDVASWNTMILGYGMIGELESAINMFEAMRDDKVQYDLVSYIAVLSACSHGGLVE 983
            +QI  KDVASWNTMILGYGM+GEL  AI+ FEA+++  ++YD VSYIA+LSACSHGGL++
Sbjct: 701  DQIQHKDVASWNTMILGYGMLGELNLAISFFEALKEAGIEYDSVSYIAILSACSHGGLLD 760

Query: 984  RGWQYFSEMLDQHLEPTEMHYTCLVDLLGRAGFVEEAAELIRRLPIAPDSNIWGALLGAC 1043
             G +YF  M  Q  +PTEMHY C+VDLLGRAG +EEA +LI+ LPI PD+NIWGALLGAC
Sbjct: 761  EGRKYFEAMKAQKFKPTEMHYACMVDLLGRAGLLEEAEQLIKSLPITPDANIWGALLGAC 778

Query: 1044 RIYGNVELGCKAAEHLFELKPQHCGYYILLSNMYAETGRWDEVNRIRELMKSRGAKKSPG 1103
            RI+GNV LGC AAE+LF+LKPQH GYY +LSNM+AE G+WDE NR++E+MK RGA+K PG
Sbjct: 821  RIFGNVGLGCWAAENLFKLKPQHAGYYAVLSNMFAEAGKWDEANRVKEMMKLRGARKKPG 778

Query: 1104 CSWVQIHGQLHAFVVDDRAE 1111
            CSWV I  Q+HAFVV +R E
Sbjct: 881  CSWVHIQDQVHAFVVGERME 778

[Close]

BLAST of Cp4.1LG16g08460 vs. TAIR10
Match: AT2G13600.1 (AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 385.6 bits (989), Expect = 1.2e-106
Identity = 204/539 (37.85%), Postives = 311/539 (57.70%), Query Frame = 1


Query: 601  WNGTLDGLQTYNR----------MVRLGVQLDDHTFPFVLKICSDSLDICKGMEVHGVVF 660
            WN  + G   ++R          M + G  L++++F  VL  CS   D+ KG++VH ++ 
Sbjct: 120  WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179

Query: 661  KLGFDSDVYVGNTLLMLYGNCGFLNDATKVFDEMSERDVVSWNTVIGLLSVNGDYREARN 720
            K  F SDVY+G+ L+ +Y  CG +NDA +VFDEM +R+VVSWN++I     NG   EA +
Sbjct: 180  KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239

Query: 721  YYFWMTLRSGIQPN------------LLECFKAGKEIHGFSMRMGT-ETDLFTANSLIDM 780
              F M L S ++P+             L   K G+E+HG  ++      D+  +N+ +DM
Sbjct: 240  V-FQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDM 299

Query: 781  YAKSGHSTEASSIFHSMDRRNIVSWNTMIANYALNGVALEAIRFVILLQESGERPNAVTF 840
            YAK     EA  IF SM  RN+++  +MI+ YA+   + +A R  ++  +  ER N V++
Sbjct: 300  YAKCSRIKEARFIFDSMPIRNVIAETSMISGYAM-AASTKAAR--LMFTKMAER-NVVSW 359

Query: 841  TNVLPACARYSETNDCLESLNLFSEMRLLGKKPDVVSFMGVISACANLAAVKQGKEIH-- 900
              ++   A Y++  +  E+L+LF  ++     P   SF  ++ ACA+LA +  G + H  
Sbjct: 360  NALI---AGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVH 419

Query: 901  ----GVALRNHLNSHLFVSNSLLDFYTKCGRIDLACKIFNQILFKDVASWNTMILGYGMI 960
                G   ++     +FV NSL+D Y KCG ++    +F +++ +D  SWN MI+G+   
Sbjct: 420  VLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN 479

Query: 961  GELESAINMFEAMRDDKVQYDLVSYIAVLSACSHGGLVERGWQYFSEML-DQHLEPTEMH 1020
            G    A+ +F  M +   + D ++ I VLSAC H G VE G  YFS M  D  + P   H
Sbjct: 480  GYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDH 539

Query: 1021 YTCLVDLLGRAGFVEEAAELIRRLPIAPDSNIWGALLGACRIYGNVELGCKAAEHLFELK 1080
            YTC+VDLLGRAGF+EEA  +I  +P+ PDS IWG+LL AC+++ N+ LG   AE L E++
Sbjct: 540  YTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVE 599

Query: 1081 PQHCGYYILLSNMYAETGRWDEVNRIRELMKSRGAKKSPGCSWVQIHGQLHAFVVDDRA 1110
            P + G Y+LLSNMYAE G+W++V  +R+ M+  G  K PGCSW++I G  H F+V D++
Sbjct: 600  PSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKS 650

[Close]

BLAST of Cp4.1LG16g08460 vs. TAIR10
Match: AT1G20230.1 (AT1G20230.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 361.3 bits (926), Expect = 2.4e-99
Identity = 184/547 (33.64%), Postives = 306/547 (55.94%), Query Frame = 1


Query: 611  YNRMVRLGVQLDDHTFPFVLKICSDSLDICKGMEVHGVVFKLGFDSDVYVGNTLLMLYGN 670
            ++RM   G+  D H  P + K+C++      G ++H V    G D D +V  ++  +Y  
Sbjct: 104  FSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMR 163

Query: 671  CGFLNDATKVFDEMSERDVV-----------------------------------SWNTV 730
            CG + DA KVFD MS++DVV                                   SWN +
Sbjct: 164  CGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGI 223

Query: 731  IGLLSVNGDYREARNYYFWMTLRSGIQPNLL------------ECFKAGKEIHGFSMRMG 790
            +   + +G ++EA    F      G  P+ +            E    G+ IHG+ ++ G
Sbjct: 224  LSGFNRSGYHKEAV-VMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQG 283

Query: 791  TETDLFTANSLIDMYAKSGHSTEASSIFHSMDRRNIVSWNTMIANYALNGVALEAIRFVI 850
               D    +++IDMY KSGH     S+F+  +       N  I   + NG+  +A+    
Sbjct: 284  LLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFE 343

Query: 851  LLQESGERPNAVTFTNVLPACARYSETNDCLESLNLFSEMRLLGKKPDVVSFMGVISACA 910
            L +E     N V++T+++  CA+  +    +E+L LF EM++ G KP+ V+   ++ AC 
Sbjct: 344  LFKEQTMELNVVSWTSIIAGCAQNGKD---IEALELFREMQVAGVKPNHVTIPSMLPACG 403

Query: 911  NLAAVKQGKEIHGVALRNHLNSHLFVSNSLLDFYTKCGRIDLACKIFNQILFKDVASWNT 970
            N+AA+  G+  HG A+R HL  ++ V ++L+D Y KCGRI+L+  +FN +  K++  WN+
Sbjct: 404  NIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNS 463

Query: 971  MILGYGMIGELESAINMFEAMRDDKVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLDQH 1030
            ++ G+ M G+ +  +++FE++   +++ D +S+ ++LSAC   GL + GW+YF  M +++
Sbjct: 464  LMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEY 523

Query: 1031 -LEPTEMHYTCLVDLLGRAGFVEEAAELIRRLPIAPDSNIWGALLGACRIYGNVELGCKA 1090
             ++P   HY+C+V+LLGRAG ++EA +LI+ +P  PDS +WGALL +CR+  NV+L   A
Sbjct: 524  GIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIA 583

Query: 1091 AEHLFELKPQHCGYYILLSNMYAETGRWDEVNRIRELMKSRGAKKSPGCSWVQIHGQLHA 1110
            AE LF L+P++ G Y+LLSN+YA  G W EV+ IR  M+S G KK+PGCSW+Q+  +++ 
Sbjct: 584  AEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYT 643

[Close]

BLAST of Cp4.1LG16g08460 vs. TAIR10
Match: AT3G02330.1 (AT3G02330.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 354.4 bits (908), Expect = 2.9e-97
Identity = 237/851 (27.85%), Postives = 402/851 (47.24%), Query Frame = 1


Query: 322  SLNLFSEMRLLGKKPDVVSFMGVISACANLAAVKQGKEIHG---------------VALR 381
            S + F++           +F  V   CA   A++ GK+ H                  L+
Sbjct: 32   SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91

Query: 382  NHLNSHLFVS----------------NSLLDFYTKCGRIDLACKIFNQILFKDVASWNTM 441
             + NS  FVS                N +++ Y+K   +  A   FN +  +DV SWN+M
Sbjct: 92   VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151

Query: 442  ILGYGMIGELESAINMFEAMRDDKVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLDQHL 501
            + GY   GE   +I +F  M  + +++D  ++  +L  CS       G Q    ++    
Sbjct: 152  LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC 211

Query: 502  EPTEMHYTCLVDLLGRAGFVEEAAELIRRLPIAPDSNIWGALLGACRIYGNVELGCKAAE 561
            +   +  + L+D+  +     E+  + + +P   +S  W A++  C     + L  K  +
Sbjct: 212  DTDVVAASALLDMYAKGKRFVESLRVFQGIP-EKNSVSWSAIIAGCVQNNLLSLALKFFK 271

Query: 562  HLFELKP--QHCGYYILLSNMYA----ETGRWDEVNRIRELMKSRGAKKSPGCS-WVQIH 621
             + ++        Y  +L +  A      G     + ++    + G  ++     + +  
Sbjct: 272  EMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCD 331

Query: 622  GQLHAFVVDDRAEGF--EFWNGTLDG----------LQTYNRMVRLGVQLDDHTFPFVLK 681
                A ++ D +E    + +N  + G          L  ++R++  G+  D+ +   V +
Sbjct: 332  NMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFR 391

Query: 682  ICSDSLDICKGMEVHGVVFKLGFDSDVYVGNTLLMLYGNCGFLNDATKVFDEMSERDVVS 741
             C+    + +G++++G+  K     DV V N  + +YG C  L +A +VFDEM  RD VS
Sbjct: 392  ACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS 451

Query: 742  WNTVIGLLSVNGDYREARNYYFWMTLRSGIQPN-------LLECFKA----GKEIHGFSM 801
            WN +I     NG   E   + F   LRS I+P+       L  C       G EIH   +
Sbjct: 452  WNAIIAAHEQNGKGYETL-FLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIV 511

Query: 802  RMGTETDLFTANSLIDMYAKSGHSTEASSIFHSMDRRNIVSWNTMIANYALNGVALEAIR 861
            + G  ++     SLIDMY+K G   EA  I     +R  VS  TM     ++   L+ + 
Sbjct: 512  KSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS-GTMEELEKMHNKRLQEM- 571

Query: 862  FVILLQESGERPNAVTFTNVLPACARYSETNDCLESLNLFSEMRLLGKKPDVVSFMGVIS 921
                          V++ +++       ++ D   +  LF+ M  +G  PD  ++  V+ 
Sbjct: 572  -------------CVSWNSIISGYVMKEQSED---AQMLFTRMMEMGITPDKFTYATVLD 631

Query: 922  ACANLAAVKQGKEIHGVALRNHLNSHLFVSNSLLDFYTKCGRIDLACKIFNQILFKDVAS 981
             CANLA+   GK+IH   ++  L S +++ ++L+D Y+KCG +  +  +F + L +D  +
Sbjct: 632  TCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVT 691

Query: 982  WNTMILGYGMIGELESAINMFEAMRDDKVQYDLVSYIAVLSACSHGGLVERGWQYFSEM- 1041
            WN MI GY   G+ E AI +FE M  + ++ + V++I++L AC+H GL+++G +YF  M 
Sbjct: 692  WNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMK 751

Query: 1042 LDQHLEPTEMHYTCLVDLLGRAGFVEEAAELIRRLPIAPDSNIWGALLGACRIY-GNVEL 1101
             D  L+P   HY+ +VD+LG++G V+ A ELIR +P   D  IW  LLG C I+  NVE+
Sbjct: 752  RDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEV 811

Query: 1102 GCKAAEHLFELKPQHCGYYILLSNMYAETGRWDEVNRIRELMKSRGAKKSPGCSWVQIHG 1110
              +A   L  L PQ    Y LLSN+YA+ G W++V+ +R  M+    KK PGCSWV++  
Sbjct: 812  AEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKD 862

[Close]

BLAST of Cp4.1LG16g08460 vs. TAIR10
Match: AT3G29230.1 (AT3G29230.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 350.1 bits (897), Expect = 5.5e-96
Identity = 202/557 (36.27%), Postives = 310/557 (55.66%), Query Frame = 1


Query: 42  SLRQTKEVHAICLLNGLLPHSVSLCASLILNYAKFQHPESFCTLFHQTVQNCRTAFLWNT 101
           +L Q K++HA  +   L    + +   LI   +  +       +F+Q  +      L N+
Sbjct: 31  NLNQVKQLHAQIIRRNL-HEDLHIAPKLISALSLCRQTNLAVRVFNQVQEP--NVHLCNS 90

Query: 102 LIRAHSIAGNGTLDGLETYNRMVRFGVQLDDHTFPFVLKICSDSLDICKGMEVHGVVFKL 161
           LIRAH+   +        ++ M RFG+  D+ T+PF+LK CS    +     +H  + KL
Sbjct: 91  LIRAHA-QNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKL 150

Query: 162 GFDSDVYVGNTLLMLYGNCGFLN--DAKKVFDEMSERDVVSWNTVIGLLSVNGDYREARK 221
           G  SD+YV N L+  Y  CG L   DA K+F++MSERD VSWN+++G L   G+ R+AR+
Sbjct: 151 GLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARR 210

Query: 222 EIHGFSMRMGTETDLFTANSLIDMYAKSGHSTEASSIFHSMDRRNIVSWNTMIANYALNG 281
                  R     DL + N+++D YA+    ++A  +F  M  RN VSW+TM+  Y+  G
Sbjct: 211 LFDEMPQR-----DLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAG 270

Query: 282 VALEAIRFVILLQESGERPNAVTFTNVLPACARYSETNDCLESLNLFSEMRLLGKKPDVV 341
             +E  R V+  +      N VT+T ++   A Y+E     E+  L  +M   G K D  
Sbjct: 271 -DMEMAR-VMFDKMPLPAKNVVTWTIII---AGYAEKGLLKEADRLVDQMVASGLKFDAA 330

Query: 342 SFMGVISACANLAAVKQGKEIHGVALRNHLNSHLFVSNSLLDFYTKCGRIDLACKIFNQI 401
           + + +++AC     +  G  IH +  R++L S+ +V N+LLD Y KCG +  A  +FN I
Sbjct: 331 AVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDI 390

Query: 402 LFKDVASWNTMILGYGMIGELESAINMFEAMRDDKVQYDLVSYIAVLSACSHGGLVERGW 461
             KD+ SWNTM+ G G+ G  + AI +F  MR + ++ D V++IAVL +C+H GL++ G 
Sbjct: 391 PKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGI 450

Query: 462 QYFSEMLDQH-LEPTEMHYTCLVDLLGRAGFVEEAAELIRRLPIAPDSNIWGALLGACRI 521
            YF  M   + L P   HY CLVDLLGR G ++EA ++++ +P+ P+  IWGALLGACR+
Sbjct: 451 DYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRM 510

Query: 522 YGNVELGCKAAEHLFELKPQHCGYYILLSNMYAETGRWDEVNRIRELMKSRGAKKSPGCS 581
           +  V++  +  ++L +L P   G Y LLSN+YA    W+ V  IR  MKS G +K  G S
Sbjct: 511 HNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGAS 570

Query: 582 WVQIHGQLHAFVVDDRA 596
            V++   +H F V D++
Sbjct: 571 SVELEDGIHEFTVFDKS 573

[Close]

BLAST of Cp4.1LG16g08460 vs. TAIR10
Match: AT4G18750.1 (AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 347.1 bits (889), Expect = 4.7e-95
Identity = 213/678 (31.42%), Postives = 359/678 (52.95%), Query Frame = 1


Query: 26  NSAVHINLLTLCFNAQSLRQTKEVHAICLLNGLLPHSV-----SLCASLILNYAKFQHPE 85
           +S V ++  T    ++S    + VH    L+G +  S      S+  SL+  Y K Q  +
Sbjct: 188 SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD 247

Query: 86  SFCTLFHQTVQNCRTAFLWNTLIRAHSIAGNGTLD-GLETYNRMVRFGVQLDDHTFPFVL 145
           S   +F +  +  R    WN++I  +    NG  + GL  + +M+  G+++D  T   V 
Sbjct: 248 SARKVFDEMTE--RDVISWNSIINGY--VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 307

Query: 146 KICSDSLDICKGMEVHGVVFKLGFDSDVYVGNTLLMLYGNCGFLNDAKKVFDEMSERDVV 205
             C+DS  I  G  VH +  K  F  +    NTLL +Y  CG L+ AK VF EMS+R VV
Sbjct: 308 AGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVV 367

Query: 206 SWNTVIGLLSVNGDYREARKEIHGFSMRMGTETDLFTANSLIDMYAKSGHSTEASSIFHS 265
           S+ ++I   +  G   EA K         G   D++T  ++++  A+     E   + H 
Sbjct: 368 SYTSMIAGYAREGLAGEAVKLFEEMEEE-GISPDVYTVTAVLNCCARYRLLDEGKRV-HE 427

Query: 266 MDRRNIVSWNTMIANYALNGVA-LEAIRFVILLQESGERPNAVTFTNVLPACARYSETND 325
             + N + ++  ++N  ++  A   +++   L+       + +++  ++   ++    N+
Sbjct: 428 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 487

Query: 326 CLESLNLFSEMRLLGKKPDVVSFMGVISACANLAAVKQGKEIHGVALRNHLNSHLFVSNS 385
            L   NL  E +     PD  +   V+ ACA+L+A  +G+EIHG  +RN   S   V+NS
Sbjct: 488 ALSLFNLLLEEKRFS--PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 547

Query: 386 LLDFYTKCGRIDLACKIFNQILFKDVASWNTMILGYGMIGELESAINMFEAMRDDKVQYD 445
           L+D Y KCG + LA  +F+ I  KD+ SW  MI GYGM G  + AI +F  MR   ++ D
Sbjct: 548 LVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEAD 607

Query: 446 LVSYIAVLSACSHGGLVERGWQYFSEMLDQ-HLEPTEMHYTCLVDLLGRAGFVEEAAELI 505
            +S++++L ACSH GLV+ GW++F+ M  +  +EPT  HY C+VD+L R G + +A   I
Sbjct: 608 EISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFI 667

Query: 506 RRLPIAPDSNIWGALLGACRIYGNVELGCKAAEHLFELKPQHCGYYILLSNMYAETGRWD 565
             +PI PD+ IWGALL  CRI+ +V+L  K AE +FEL+P++ GYY+L++N+YAE  +W+
Sbjct: 668 ENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWE 727

Query: 566 EVNRIRELMKSRGAKKSPGCSWVQIHGQLHAFVVDDRAEGFEFWNGTLDGLQTYNRMVRL 625
           +V R+R+ +  RG +K+PGCSW++I G+++ FV  D +      N   + ++ + R VR 
Sbjct: 728 QVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSS------NPETENIEAFLRKVRA 787

Query: 626 GVQLDDHTFPFVLKICSDSLDICKGMEVHGVVFKLGFDSDVYVG--NTLLMLYGN---CG 685
            + +++   P       D+ ++ K   + G   KL     +       ++ +  N   CG
Sbjct: 788 RM-IEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCG 847

Query: 686 FLNDATKVFDEMSERDVV 691
             ++  K   +++ R++V
Sbjct: 848 DCHEMAKFMSKLTRREIV 850

[Close]

BLAST of Cp4.1LG16g08460 vs. NCBI nr
Match: gi|449445027|ref|XP_004140275.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g14170 [Cucumis sativus])

HSP 1 Score: 631.3 bits (1627), Expect = 3.5e-177
Identity = 337/634 (53.15%), Postives = 421/634 (66.40%), Query Frame = 1


Query: 1   MLHIGFHFAQIARFQFRNYVRSTEKNSAVH-INLLTLCFNAQSLRQTKEVHAICLLNGLL 60
           +L +   + +   + F   +RS  K + V  I+LL +    +    T+ +H   +  GL 
Sbjct: 234 LLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGL- 293

Query: 61  PHSVSLCASLILNYAKFQHPESFCTLFHQTVQNCRTAFLWNTLIRAHSIAGNGTLDGLET 120
              V+ C +L+  Y K    ++   +F++TV+    +  WN++I   +  G    D L  
Sbjct: 294 DSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS--WNSIINGLACKGR-CWDALNA 353

Query: 121 YNRMVRFGVQLDDHTFPFVLKICSDSLDICKGMEVHGVVFKLGFDSDVYVGNTLLMLYGN 180
           +  M+  G Q +  T   +L +  +      G E+HG   ++G ++D+++ N+L+ +Y  
Sbjct: 354 FRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAK 413

Query: 181 CGFLNDAKKVFDEMSERDVVSWNTVIGLLSVNGDYREA---------------------- 240
            G   +A  +F  +  R++VSWN +I   ++N    EA                      
Sbjct: 414 SGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNV 473

Query: 241 ------------RKEIHGFSMRMGTETDLFTANSLIDMYAKSGHSTEASSIFHSMDRRNI 300
                        KEIH   +R+G  +DLF +NSLIDMYAK G         HS   RN+
Sbjct: 474 LPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCG-------CLHSA--RNV 533

Query: 301 VSWNTMIANYALNGVALEAIRFVILLQESGERPNAVTFTNVLPACARYSETNDCLESLNL 360
             +NT                          R + V++ N+L     YSET+DCL+SLNL
Sbjct: 534 --FNT-------------------------SRKDEVSY-NIL--IIGYSETDDCLQSLNL 593

Query: 361 FSEMRLLGKKPDVVSFMGVISACANLAAVKQGKEIHGVALRNHLNSHLFVSNSLLDFYTK 420
           FSEMRLLGKKPDVVSF+GVISACANLAA+KQGKE+HGVALRNHL SHLFVSNSLLDFYTK
Sbjct: 594 FSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTK 653

Query: 421 CGRIDLACKIFNQILFKDVASWNTMILGYGMIGELESAINMFEAMRDDKVQYDLVSYIAV 480
           CGRID+AC++FNQILFKDVASWNTMILGYGMIGELE+AI+MFEAMRDD VQYDLVSYIAV
Sbjct: 654 CGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAV 713

Query: 481 LSACSHGGLVERGWQYFSEMLDQHLEPTEMHYTCLVDLLGRAGFVEEAAELIRRLPIAPD 540
           LSACSHGGLVERGWQYFSEML Q LEPTEMHYTC+VDLLGRAGFVEEAA+LI++LPIAPD
Sbjct: 714 LSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPD 773

Query: 541 SNIWGALLGACRIYGNVELGCKAAEHLFELKPQHCGYYILLSNMYAETGRWDEVNRIREL 600
           +NIWGALLGACRIYGNVELG +AAEHLFELKPQHCGYYILLSN+YAETGRWDE N+IREL
Sbjct: 774 ANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIREL 824

[Close]

BLAST of Cp4.1LG16g08460 vs. NCBI nr
Match: gi|659097428|ref|XP_008449620.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial [Cucumis melo])

HSP 1 Score: 620.5 bits (1599), Expect = 6.2e-174
Identity = 333/634 (52.52%), Postives = 412/634 (64.98%), Query Frame = 1


Query: 1   MLHIGFHFAQIARFQFRNYVRSTEKNSAVH-INLLTLCFNAQSLRQTKEVHAICLLNGLL 60
           +L +   + +   + F   +RS  K + V  I+LL +    +    T+ +H   +  GL 
Sbjct: 234 LLSVNGDYKEARNYYFWMILRSGIKPNLVSVISLLPISAALEDEEMTRRIHCFSVKVGL- 293

Query: 61  PHSVSLCASLILNYAKFQHPESFCTLFHQTVQNCRTAFLWNTLIRAHSIAGNGTLDGLET 120
              V+ C +L+  Y K    ++   +F++ V+  R    WN++I   +  G    D L+ 
Sbjct: 294 DSQVTTCNALVDAYGKCGSVKALWQVFNEMVE--RNEVSWNSIINGLACKGR-CWDTLKA 353

Query: 121 YNRMVRFGVQLDDHTFPFVLKICSDSLDICKGMEVHGVVFKLGFDSDVYVGNTLLMLYGN 180
           +  M+  G + +  T   +L +  +      G E+HG   ++G ++D+++ N+L+ +Y  
Sbjct: 354 FRMMIDAGAKPNSVTISSILPVLVELECFKAGKEIHGFSMRIGTETDIFIANSLIDMYAK 413

Query: 181 CGFLNDAKKVFDEMSERDVVSWNTVIGLLSVNGDYREA---------------------- 240
            G   +A  +F  +  R+VV+WN +I   ++N    EA                      
Sbjct: 414 SGRSTEASTIFHNLDRRNVVTWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNV 473

Query: 241 ------------RKEIHGFSMRMGTETDLFTANSLIDMYAKSGHSTEASSIFHSMDRRNI 300
                        KEIH   +R+G  +DLF +NSLID                       
Sbjct: 474 LPACARLGFLGPGKEIHAMVVRIGLTSDLFVSNSLID----------------------- 533

Query: 301 VSWNTMIANYALNGVALEAIRFVILLQESGERPNAVTFTNVLPACARYSETNDCLESLNL 360
                    YA  G    A         +    + V++ N+L     YSETNDC +SLNL
Sbjct: 534 --------MYAKCGSLCSARNLF-----NTSHKDEVSY-NIL--IIGYSETNDCFQSLNL 593

Query: 361 FSEMRLLGKKPDVVSFMGVISACANLAAVKQGKEIHGVALRNHLNSHLFVSNSLLDFYTK 420
           FSEMRLLGKKPDVVSF+GVISACANLAA+KQGKEIHGVALRNHL SHLFVSNSLLDFYTK
Sbjct: 594 FSEMRLLGKKPDVVSFVGVISACANLAALKQGKEIHGVALRNHLYSHLFVSNSLLDFYTK 653

Query: 421 CGRIDLACKIFNQILFKDVASWNTMILGYGMIGELESAINMFEAMRDDKVQYDLVSYIAV 480
           CGRID+AC++FNQILFKDVASWNTMILGYGMIGELE+AI+MFEAMRDD VQYDLVSYIAV
Sbjct: 654 CGRIDIACRVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAV 713

Query: 481 LSACSHGGLVERGWQYFSEMLDQHLEPTEMHYTCLVDLLGRAGFVEEAAELIRRLPIAPD 540
           LSACSHGGLVERGWQYFSEML QHLEPTEMHYTC+VDLLGRAGFVEEAAELI+RLPIAPD
Sbjct: 714 LSACSHGGLVERGWQYFSEMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAELIQRLPIAPD 773

Query: 541 SNIWGALLGACRIYGNVELGCKAAEHLFELKPQHCGYYILLSNMYAETGRWDEVNRIREL 600
           +NIWGALLGACRIYGNVELGC+AAEHLFELKPQHCGYYILLSN+YAETGRWDE NRIREL
Sbjct: 774 ANIWGALLGACRIYGNVELGCRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANRIREL 824

[Close]

BLAST of Cp4.1LG16g08460 vs. NCBI nr
Match: gi|1012349302|gb|KYP60492.1| (hypothetical protein KK1_022898 [Cajanus cajan])

HSP 1 Score: 604.4 bits (1557), Expect = 4.6e-169
Identity = 294/470 (62.55%), Postives = 363/470 (77.23%), Query Frame = 1


Query: 656  SDVYVGNTLLMLYGNCGFLNDATKVFDEMSERDVVSWNTVIGLLSVNGDYREARNYYFWM 715
            S V VGN L+ +YG CG    + KVFDE+ ER+VVSWN++I   S  G Y +A +  F +
Sbjct: 118  SHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVVSWNSIITSFSFRGKYMDALDV-FRL 177

Query: 716  TLRSGIQPNL------------LECFKAGKEIHGFSMRMGTETDLFTANSLIDMYAKSGH 775
             + +G++PN             L  FK G EIHGFS+RM  E+D+F ANSLID+YAKSG 
Sbjct: 178  MIGTGMRPNSVTISSMLPVLGELGLFKWGMEIHGFSLRMAIESDIFIANSLIDIYAKSGS 237

Query: 776  STEASSIFHSMDRRNIVSWNTMIANYALNGVALEAIRFVILLQESGERPNAVTFTNVLPA 835
            S  AS IF+ M+ R+IVSWN MIAN+A N +  EA+  V  +Q  GE PN VTFTNVLPA
Sbjct: 238  SRIASIIFNKMEGRSIVSWNAMIANFAQNRLEFEAVELVRQMQAKGETPNNVTFTNVLPA 297

Query: 836  CARYSETNDCLESLNLFSEMRLLGKKPDVVSFMGVISACANLAAVKQGKEIHGVALRNHL 895
            C  YS TNDC ES++LFSEM LLG  PD+VSFMGVISACANLA+++QGKE+HG+ +R   
Sbjct: 298  C--YSRTNDCSESISLFSEMILLGMLPDIVSFMGVISACANLASIRQGKEVHGLLMRKLF 357

Query: 896  NSHLFVSNSLLDFYTKCGRIDLACKIFNQILFKDVASWNTMILGYGMIGELESAINMFEA 955
            ++HLFV+NSLLD YT+CGRIDLA K+F++I  KDVASWNTMILGYGM+GELE+AIN+FEA
Sbjct: 358  HTHLFVANSLLDLYTRCGRIDLATKVFDRIQNKDVASWNTMILGYGMLGELETAINLFEA 417

Query: 956  MRDDKVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLDQHLEPTEMHYTCLVDLLGRAGF 1015
            M++D V+YD VS+IAVLSACSHGGL+E+G +YF  M D ++EP   HY C+VDLLGRAG 
Sbjct: 418  MKEDGVEYDSVSFIAVLSACSHGGLIEKGRKYFKMMHDLNIEPAHTHYACMVDLLGRAGL 477

Query: 1016 VEEAAELIRRLPIAPDSNIWGALLGACRIYGNVELGCKAAEHLFELKPQHCGYYILLSNM 1075
            + EAA+LIR L I PD+NIWGALLGACRI+GN+ELG  AAEHLF+LKPQH GYYILLSNM
Sbjct: 478  MREAADLIRGLSIVPDTNIWGALLGACRIHGNIELGHWAAEHLFKLKPQHSGYYILLSNM 537

Query: 1076 YAETGRWDEVNRIRELMKSRGAKKSPGCSWVQIHGQLHAFVVDDRAEGFE 1114
            YAE  RWDE N++RELMKSRGAKK+PGCSWVQ   Q+HAF+V ++ +  +
Sbjct: 538  YAEAERWDEANKVRELMKSRGAKKNPGCSWVQTGDQVHAFLVGEKIDSLD 584

[Close]

BLAST of Cp4.1LG16g08460 vs. NCBI nr
Match: gi|595841762|ref|XP_007208277.1| (hypothetical protein PRUPE_ppa015109mg [Prunus persica])

HSP 1 Score: 567.8 bits (1462), Expect = 4.8e-158
Identity = 287/514 (55.84%), Postives = 356/514 (69.26%), Query Frame = 1


Query: 611  YNRMVRLGVQLDDHTFPF--VLKICSDSLDICKGMEVHGVVFKLGFDSDVYVGNTLLMLY 670
            Y R + LG+    +      VL +C++  D    +++H  V K G D  V  GN L+ +Y
Sbjct: 28   YYREMNLGIGFKPNLVSVISVLPVCAELEDERMAIQIHCYVVKAGLDLLVTTGNALVDVY 87

Query: 671  GNCGFLNDATKVFDEMSERDVVSWNTVIGLLSVNGDYREARNYYFWMTLRSGIQPNL--- 730
            G CG  N + +VF E+ +++ VSWN  I  LS  G   EA   + WM +  G++PN    
Sbjct: 88   GKCGNANASKQVFGEIIQKNEVSWNAAITSLSYMGHNIEALATFRWM-IDEGVKPNSVTI 147

Query: 731  ---------LECFKAGKEIHGFSMRMGTETDLFTANSLIDMYAKSGHSTEASSIFHSMDR 790
                     L  F  G+ +HGFS+RMG E+D+F ANSLIDMYAKSG S EAS++F  MD+
Sbjct: 148  SSMIPVLVELAFFGVGRRLHGFSIRMGIESDVFIANSLIDMYAKSGRSNEASNVFQEMDK 207

Query: 791  RNIVSWNTMIANYALNGVALEAIRFVILLQESGERPNAVTFTNVLPACARYSETNDCLES 850
            RNIVSWN MIAN+  N + LEAI  V  +Q                            ES
Sbjct: 208  RNIVSWNAMIANFGQNRLELEAIGLVRQMQGH--------------------------ES 267

Query: 851  LNLFSEMRLLGKKPDVVSFMGVISACANLAAVKQGKEIHGVALRNHLNSHLFVSNSLLDF 910
            LNLFSEM+L+G   D+VSF+GVISACAN+ A+KQGKEIHG  +R   ++HLFV+NSLLDF
Sbjct: 268  LNLFSEMKLVGMIHDIVSFVGVISACANVTAIKQGKEIHGSLVRKLFHTHLFVANSLLDF 327

Query: 911  YTKCGRIDLACKIFNQILFKDVASWNTMILGYGMIGELESAINMFEAMRDDKVQYDLVSY 970
            YTKCGRIDLA K+F++I  KDVASWNTMILGYGM+GEL +AI++FEAMR+D V+YD VSY
Sbjct: 328  YTKCGRIDLAAKVFDRIPSKDVASWNTMILGYGMLGELNTAISLFEAMREDGVEYDSVSY 387

Query: 971  IAVLSACSHGGLVERGWQYFSEMLDQHLEPTEMHYTCLVDLLGRAGFVEEAAELIRRLPI 1030
            IAVLS+CSHGGLVE+G +YF  M   ++EPTE HY C+VDLLGRAG +EEA ELI+ +PI
Sbjct: 388  IAVLSSCSHGGLVEKGKKYFEGMQALNIEPTEKHYACMVDLLGRAGLMEEAVELIKGMPI 447

Query: 1031 APDSNIWGALLGACRIYGNVELGCKAAEHLFELKPQHCGYYILLSNMYAETGRWDEVNRI 1090
             PD+NIWGALLGACRI+GNVEL   AA+HLF L P+HCGYYILLSNMYAE GRWDEVNR+
Sbjct: 448  VPDANIWGALLGACRIHGNVELASWAADHLFRLNPEHCGYYILLSNMYAEAGRWDEVNRV 507

Query: 1091 RELMKSRGAKKSPGCSWVQIHGQLHAFVVDDRAE 1111
            RELMKSRG KK+  CSWVQ+  Q+HAF V +  E
Sbjct: 508  RELMKSRGVKKNRACSWVQVQDQVHAFAVGESLE 514

[Close]

BLAST of Cp4.1LG16g08460 vs. NCBI nr
Match: gi|922378529|ref|XP_013459503.1| (pentatricopeptide (PPR) repeat protein [Medicago truncatula])

HSP 1 Score: 542.0 bits (1395), Expect = 2.8e-150
Identity = 318/827 (38.45%), Postives = 450/827 (54.41%), Query Frame = 1


Query: 340  SFMGVISACANLAAVKQGKEIHGVALRNHLNSH-LFVSNSLLDFYTKCGRIDLACKIFNQ 399
            S   ++  C +   + Q  ++H  ++ N    H + +S SL+  Y      + +  +F  
Sbjct: 33   SSSNLLHLCTHSQTLSQTNQLHAFSILNAFLPHSVSISASLILKYASFRHPETSLILFQN 92

Query: 400  IL--FKDVASWNTMILGYGMIGELESAINMFEAMRDDKVQYDLVSYIAVLSAC------- 459
             L   K    WNT+I  Y + G  +    ++  M    V+ D  +Y  VL AC       
Sbjct: 93   TLPFSKTAFLWNTLIRAYSIAGFFDG-FGVYNTMVRSGVKPDDHTYPFVLKACSDYLKFD 152

Query: 460  ----SHGGLVERGWQ-----------------YFSEML---DQHLEPTEMHYTCLVDLLG 519
                 HG + + G+                  +F + +   D+  E  ++ +  ++ L  
Sbjct: 153  KGREVHGVVFKVGFDKDVFVGNTLLMFYGNCGFFVDAMNVFDEMFERDKVSWNTVIGLCS 212

Query: 520  RAGFVEEAAELIRRLPIA-----PDSNIWGALLGACRIYGNVELGCKAAEHLFELKPQ-H 579
              GF EE+    + + +A     PD     ++L  C    NV +      ++F++    H
Sbjct: 213  DRGFHEESLCFFKEMVVAAPVVRPDLVTVVSVLPVCADSENVVMARIVHGYVFKVGLSGH 272

Query: 580  CGYYILLSNMYAETGRWDEVNRIRELMKSRGAKKSPGCSWVQIHGQLHAFVVDDRAEGFE 639
                  L ++Y + G  +   ++ + M  R        SW  +              GF 
Sbjct: 273  VKVGNALVDVYGKCGSEEACKKVFDEMDERNE-----VSWNAV------------ITGFS 332

Query: 640  FWNGTLDGLQTYNRMVRLGVQLDDHTFPFVLKICSDSLDICKGMEVHGVVFKLGFDSDVY 699
            F   ++D L  +  M+  G++ +  T   +L +  +      GMEVHG   ++G +SD++
Sbjct: 333  FRGLSMDALDAFRSMINTGMRPNPVTISSMLPVLGELGLFKLGMEVHGYSLRMGIESDIF 392

Query: 700  VGNTLLMLYGNCGFLNDATKVFDEMSERDVVSWNTVIGLLSVNGDYREARNYYFWMTLRS 759
            +GN+L+ +Y   G    A+ +F++M +R++VSWN+++   + N  +  A      M    
Sbjct: 393  IGNSLIDMYAKSGSSRVASTIFNKMGDRNIVSWNSMVANFAQNRHHFAAVELLRQMQAH- 452

Query: 760  GIQPN-------LLECFK-----AGKEIHGFSMRMGTETDLFTANSLIDMYAKSGHSTEA 819
            G  PN       L  C +      GKEIH   ++ G  TDLF +N+L DMY+K GH    
Sbjct: 453  GENPNNVTFTNVLPACARLGFLNVGKEIHARIIQTGCATDLFLSNALTDMYSKCGH---- 512

Query: 820  SSIFHSMDRRNIVSWNTMIANYALNGVALEAIRFVILLQESGERPNAVTFTNVLPACARY 879
                              +A    N    + + + IL+                     Y
Sbjct: 513  ----------------LSLARNVFNVSIKDKVSYNILI-------------------IGY 572

Query: 880  SETNDCLESLNLFSEMRLLGKKPDVVSFMGVISACANLAAVKQGKEIHGVALRNHLNSHL 939
            S+T +  ESLNLFSEMRL G  PD+VSF+G+ISACA+L+++KQGKEIHG  +R   ++HL
Sbjct: 573  SQTTNSSESLNLFSEMRLSGMTPDIVSFIGIISACAHLSSIKQGKEIHGHLVRKLFHTHL 632

Query: 940  FVSNSLLDFYTKCGRIDLACKIFNQILFKDVASWNTMILGYGMIGELESAINMFEAMRDD 999
            F +NSLLD YTKCGRIDLA K+F++I  KDVASWNTMILGYGM GE E+AIN+FEAM++D
Sbjct: 633  FAANSLLDLYTKCGRIDLATKVFDRIQHKDVASWNTMILGYGMRGEFETAINLFEAMKED 692

Query: 1000 K-VQYDLVSYIAVLSACSHGGLVERGWQYFSEMLDQHLEPTEMHYTCLVDLLGRAGFVEE 1059
              V+YD VSYIAVLSACSHGGL+E+G +YF +M D ++EPT  HY C+VDLLGRAG +EE
Sbjct: 693  GGVEYDSVSYIAVLSACSHGGLIEKGNKYFKQMQDYNIEPTHTHYACMVDLLGRAGQIEE 752

Query: 1060 AAELIRRLPIAPDSNIWGALLGACRIYGNVELGCKAAEHLFELKPQHCGYYILLSNMYAE 1114
            AA LIR L   PD+NIWGALLGACRIYGNVELG  AAEHLF+LKP HCGYYILLSNMYAE
Sbjct: 753  AANLIRGLSFEPDANIWGALLGACRIYGNVELGHWAAEHLFKLKPDHCGYYILLSNMYAE 801

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g08460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP151_ARATH	2.1e-105	37.85	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN...	[more]
PPR53_ARATH	4.3e-98	33.64	Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana GN...	[more]
PP207_ARATH	5.2e-96	27.85	Pentatricopeptide repeat-containing protein At3g02330 OS=Arabidopsis thaliana GN...	[more]
PP261_ARATH	9.8e-95	36.27	Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN...	[more]
PP320_ARATH	8.3e-94	31.42	Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t...	[more]

BLAST of Cp4.1LG16g08460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEH6_CUCSA	2.5e-177	53.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G428560 PE=4 SV=1	[more]
A0A151T0A3_CAJCA	3.2e-169	62.55	Uncharacterized protein OS=Cajanus cajan GN=KK1_022898 PE=4 SV=1	[more]
M5W843_PRUPE	3.3e-158	55.84	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015109mg PE=4 SV=1	[more]
A0A072UUM5_MEDTR	2.0e-150	38.45	Pentatricopeptide (PPR) repeat protein OS=Medicago truncatula GN=MTR_3g045450 PE...	[more]
A0A0D2QBB4_GOSRA	1.1e-145	38.50	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G076800 PE=4 SV=1	[more]

BLAST of Cp4.1LG16g08460 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G13600.1	1.2e-106	37.85	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G20230.1	2.4e-99	33.64	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G02330.1	2.9e-97	27.85	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G29230.1	5.5e-96	36.27	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G18750.1	4.7e-95	31.42	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of Cp4.1LG16g08460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445027\|ref\|XP_004140275.1\|	3.5e-177	53.15	PREDICTED: pentatricopeptide repeat-containing protein At4g14170 [Cucumis sativu...	[more]
gi\|659097428\|ref\|XP_008449620.1\|	6.2e-174	52.52	PREDICTED: putative pentatricopeptide repeat-containing protein At1g69350, mitoc...	[more]
gi\|1012349302\|gb\|KYP60492.1\|	4.6e-169	62.55	hypothetical protein KK1_022898 [Cajanus cajan]	[more]
gi\|595841762\|ref\|XP_007208277.1\|	4.8e-158	55.84	hypothetical protein PRUPE_ppa015109mg [Prunus persica]	[more]
gi\|922378529\|ref\|XP_013459503.1\|	2.8e-150	38.45	pentatricopeptide (PPR) repeat protein [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g08460.1	Cp4.1LG16g08460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 266..295 score: 0.27coord: 662..688 score: 0.0042coord: 990..1013 score: 0.085coord: 780..809 score: 0.27coord: 199..218 score: 0.16coord: 690..712 score: 0.083coord: 476..499 score: 0.085coord: 377..400 score: 0.2coord: 891..914 score: 0.2coord: 171..197 score: 0.0015coord: 236..265 score: 8.9E-5coord: 750..779 score: 8.
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 402..450 score: 1.2E-7coord: 916..964 score: 1.
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 406..438 score: 1.7E-4coord: 750..780 score: 1.9E-4coord: 954..987 score: 1.4E-4coord: 236..266 score: 1.9E-4coord: 440..473 score: 1.4E-4coord: 171..199 score: 0.0029coord: 920..952 score: 1.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 268..298 score: 5.59coord: 403..437 score: 10.106coord: 782..812 score: 5.59coord: 987..1017 score: 6.829coord: 917..951 score: 10.106coord: 657..687 score: 8.32coord: 95..130 score: 8.627coord: 813..850 score: 7.805coord: 299..336 score: 7.805coord: 473..503 score: 6.829coord: 438..472 score: 10.369coord: 1053..1087 score: 7.311coord: 747..781 score: 10.348coord: 688..723 score: 9.471coord: 886..916 score: 6.928coord: 337..371 score: 5.514coord: 539..573 score: 7.311coord: 233..267 score: 10.348coord: 372..402 score: 6.928coord: 851..885 score: 5.514coord: 952..986 score: 10.369coord: 166..200 score: 9
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 520..556 score: 1.1E-8coord: 1018..1072 score: 1.1E-8coord: 889..948 score: 1.
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 382..427 score: 1.68E-6coord: 664..712 score: 1.68E-6coord: 520..556 score: 1.68E-6coord: 893..1074 score: 2.81E-5coord: 516..566 score: 2.8
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 748..792 score: 3.7E-286coord: 831..1094 score: 3.7E-286coord: 614..724 score: 3.7E-286coord: 407..429 score: 3.7E-286coord: 54..200 score: 3.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG16g08460	CmoCh20G001390	Cucurbita moschata (Rifu)	cmocpeB517

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG16g08460	Wax gourd	cpewgoB0354
Cp4.1LG16g08460	Cucurbita pepo (Zucchini)	cpecpeB310
Cp4.1LG16g08460	Cucumber (Gy14) v1	cgycpeB0160
Cp4.1LG16g08460	Cucurbita maxima (Rimu)	cmacpeB564
Cp4.1LG16g08460	Cucurbita maxima (Rimu)	cmacpeB627
Cp4.1LG16g08460	Cucurbita moschata (Rifu)	cmocpeB576
Cp4.1LG16g08460	Wild cucumber (PI 183967)	cpecpiB283
Cp4.1LG16g08460	Cucumber (Chinese Long) v2	cpecuB281
Cp4.1LG16g08460	Bottle gourd (USVL1VR-Ls)	cpelsiB227
Cp4.1LG16g08460	Watermelon (Charleston Gray)	cpewcgB255
Cp4.1LG16g08460	Watermelon (97103) v1	cpewmB287
Cp4.1LG16g08460	Melon (DHL92) v3.5.1	cpemeB278
Cp4.1LG16g08460	Cucumber (Gy14) v2	cgybcpeB755
Cp4.1LG16g08460	Melon (DHL92) v3.6.1	cpemedB323
Cp4.1LG16g08460	Melon (DHL92) v3.6.1	cpemedB324
Cp4.1LG16g08460	Silver-seed gourd	carcpeB1273
Cp4.1LG16g08460	Cucumber (Chinese Long) v3	cpecucB0348