Cp4.1LG16g08450 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG16g08450
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Hydroxymethylglutaryl-CoA lyase
Location	Cp4.1LG16 : 8101294 .. 8107644 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATAAAAAATTAATTTGAAGAGAGGAAGCTTGAGAGAATGAAGAATTGACCAACTTCCAACTGACAACAACCTACCACCTCTCCTTCCCCAGAACAGAAGAAACCACAATTTATTGATACTGACCTAAATTCTGCGATGGAAAAGAGAGAGAAAATATATGCAAATTTCCGCATTTACGACGTCCACCAACCCAACAAACACAGGCAAATTTCAATTTCATTTTTGTTCGCAACGCGGTTTGTTGCTCTTCAATTTCATCGCATCGGTTACCATTTCATCATCTCTACCGCGCTGAAGCGTTCCTTTCCCGATTTCCCGCTTTAGGTTCGATTCTTTTCATCTCTTCTCTTTCCTTTTTGCCTTTTTTTGTTTAGGTTTTTTGGAATTTTTTTCTGGAATTTCTGTTGCTCGTGTTTGGCTGTCCAAAAAGTGTAGGTATTATAGAAGTCATTGATATTGTTACCATTCGCTGTTTCTATGGTGTTCATAAATTATACAATCTGTACGCTAATTGGTTCGTGTGAAGGAGTTGGCTCGATTTTGTAATTTAGTTTTTCTCTTTTGAAAAAATGGGTTATGATCATCGCCTGCGAGTTTTCTCTAATCCTGAATTGGGATCGCTTCTATTAGTTTTTTTTGAACATGCTTGTTACGGAAGATTGTTGAAATTCAGTTGTTATATTGGATATAGTTCTCCTATTACTTACTTTGAGCCCTCAGTTTTCTATCATATGCCATCTCCTTGATGCTATCCTGAATTTTACAAACAATGTTAGAACTTGTGGATGGATTGTTGAAACCTCCCCTTTAATCTTTTGATTTTTAGGGGGCCAATGAAATTTAACTTTCCTTATATGGGGAAGTTGTGAGATGTCCTTGTAATGGTGTATTTCAAGAAAACATGTAACAACTCAAGCCCATTGGTAGTAGATATTGTCCTCTTTGGGCTTTTCCTTTCGGGCTTACCCTCAAGGTTTTTAAAATACGTCTGCTAGGAAGAAGTTTCCACACCCTTATAAAGAATGCTTCGTTCTCCTCCCCAACCGATGTGGGATCCATCCCCTTCGGGGCCCAGCGTCCTCACTGGCACTCTTTCCCTTTTCCAATCCATGTGGGACCCCCCAATTCACCCCTCTTCGCGGCCCAACGTCCTTGCTGGCACACCGTCTCGTGTCCACCCCCTTTCGGGACTCAGCCTCCTCACTGGCACATCGCCCGGTGTCTGGCGCTGATACCAATTGTAACGGCCTAAGCCCATCGTTAGCTGATATTGTCTTCTTTAGACTTTCCCTTTTGAGTTTCCCCTCAAAGTTTTTAAAACGCGTCTACTAGGGAGAGGTTTCCACACCCTTATAAAAAATGCTTCGTTCTCCTCCCCAACCAATGTGGGATCTCACACTTACATTGGAAGATGGAATCTATATATACCATATGGTGGACATGTATGCATTGGAGATTTTTTTATGGCAAGAAGAATATTTCTTTATCAATTACACACAAGATCAGAATGAGCATGCCAGTGTGCTCTTGCCATTCCATTCTTGAGCTCAGTGTACAAAACATCTAGGGAATAGTTGCTTGTCTTGATTGGTACATTTGTGAATGAGAGGTGTTTGTTCAGTGCAACCTTGAGATTGAGTATTGGAGGATTGTGCATTTAAGAATTTAATATTGACGTGCAATGGAAGAATTATGAAAGAGGAATTTCTGGACTTCTATTAGAAAAATAAAGCTCATTACAGAATTTGTAGCTTCTCATTATCTGTACTATTTAATGTGGTTATGGTGTATTTAAACGGTGTAGATACAAAATTACTAGAAGTTGTTTTAGCTATGACGAGTAAGATTAATGAATTTTTTGGATAACTGGGAGTTTGAGCTTTGCTCACCTTGAGGTACCTGTGACCGCCCTAGAGCCTGGACTTGAAGATATCAAGGTAATAGCCCAAGTCCACCGCTTGCAGATATTGCCCGCTTTAGATTTTCCCTTTTGGGCTTCCCCTCAAAGTTTTTAGATCGCATCTGTTAGGGAGAGGTTTCCAACCCTTATAAAGAATGCTTCATTCTCCTCCTCAACCGATGTGAAATCTCACATCAAAGTTTTTGGTATTAAGCTCACCCGAAGGTTTTAACTTGGTACCTCTAAGCTGGTATGACTAAGAAACCCCAAAAGCCCTTGTCATCAATTTGCAGACGATTTAGTACAAATGTGCATTTTATCTTATGCTGGAGCCCCTGCCCTGCGGCTTGGGAGAGCTATTTGCATCTAAATTCATCAATTGGAAGTTGAGACTTTCTTTCTTAATTGGCATGTGGTGAATGCACGAATAGGTCATCCATTGTATGAAATTTGATACCTATGAAATTTCATTATATATTGATCTTCTTTACTTATATATGAGAGACTAAAAGAATACATTTAATAATTGCTTGCTACTTCAATCAAACAATATCACACCAGTTGATAGAAGCAATTATAAAAATAGATTTAACTAGTCTATTATTAAGGTTTCATCTGTTATTTGTTCTTCTGCAAGTAAGATAGCTATATCACTCTGGACGTGGCAGAAAATTTATTTGGTTTATTTCTCAAACTCAGTTCTGGTTTTTGCTTCTGCCTCCATAATGTCGAGTTTGGAGGAGCCACTTGGTCTTGACAAGTTGCCAAGCATGAGCACAATTGACCGGCTACAAAGATTTTCATCTGGTGCCTGCCGACCAATAGGAGATGACATGGGAATGGGTATCTGCTGGATTCAAGGGGGGAGAAGCAGCTCATCCAATACTTGCAAGTAAGCAGAATATTAAAGTCTTTTGGAAGAAAACCAAACTTTTCTTAATTTTTTCAGCTTGCTTTTGCACATTTTGGTTCTGCAATTCTTGTTGGTATGGGATGGTTCTATGACAGAAGACCCACCTTGCAAACAATCTGGCCGCATTGTTCTTTCAGTTATTTCTTACTAAATTGTCATTTTTGCAATCAACTCGGCCACACTTTTCTCCAATATGACATATCATCCTCAGGGAATATGATGAGGATGCTAGAGAGACGTTTCCGTGGAGAAGACATAGGAAAGACACATCCCAAAATGGCTCTGTCAATAGGAGGACGATGAGCGCAGGCCCGGAAAAATTAGTATCTGGAAATTTTTGTGATTCACATTGTTCTCCAGGTCATGAATACAAGACTAAGAGTAGTAGCAACAACATACAGCATACTACAAATAAGGTGATTTGATACTTATTAGACCTGTATACCTGTAACCACTCTCTTTGTTTTACCCGCATCCATGCATTTTTATATCCTTTTAGTTGTTTTTCTTGCTATACCTCGTACCTACCAAATTCTAGATGTTTTGCAAACTTTTATCAGATGATTTGGTGGGCTATGGAATCTCTCTCTCTTAAAATGTGACCTTTTCATACTTATTTCGGACACGGGCTTGCAGTTTTTGAAAGATATACCAAAGTTTGTGAAGATAGTAGAAGTTGGTCCAAGGGATGGGCTTCAAAATGAGAAGGGTATGGTACCTACATCTGTGAAGGTGGAATTGATCCATAGACTAGTATCTTCAGGATTGCCTGTGGTTGAGGCTACCAGTTTTGTATCACCTACACGGGTGCCTCAGGTACTTTTGGTTTAAGTTCCTATCTTTTTTAGCCATAGTTTTAAAATGATATTAAAAATAGTCGTTTGAATCTCTTTTGAGTTCATTAAGGTATATACTCAGTCTTCTTTCTACTTTAGTGGTCTTGCCTTTACTGTTTACATCGCTTGATTGCTACAAGACGATCTAATGTTGCTGTGGATCAAAGTTCCTTAAAACTTCTCATCATTTAGGATTTCTATGTTCTGATATCAGCTGATAAGGAAACAGAGTGGGAGTTGAAGCTTTTCTCTCAATAGTTTGATCAAATGAAAACATAGTTCATTTCTTAGATTTACCATACTTTATATCACTAGTGCTCCAATATGTGAGTTACGTAAAGTATTTTTTTCTTTTTTATCCTTTGTCCAGTTATCTGATGCAGCTGAAGTCATGGAAGCCGTACGTAATTTGGAAGGTGCTAGGTTGCCAGTTTTAACTCCTAATTTGAAAGTGGGTCATCTTGTAAAATAATGTTGATTTTTTTTTTTTTTCAAACATGGATGGATTGAATCCTCGCTTATAAAACTTCACCTTCTTCCAGGGGTTTCGAGCAGCTGTTGCGGCTGGAGCAAAGGAAGTGGCAGTCTTTGCATCAGCCTCTGAATTATTTTCAAAATCTAACATCAATTGTAGCATTGAAGAAAGTCTTGATCGTTACCGAGCGGTAACTTCTGCTGCAAAAGAGCTTGCAATCCCTGTTCGAGGGTATGCTTCCATGACTCAGTGTCCATATAAATGGCTATTGGAATTTGGTTTTAATTTCCTCTGAATTTTGGTTTTAAGTTTTGAACACGACTTGTTTTCTAGAATGGTTCTCCTCATTCTGTTCTTTTGAAGGGTTCTCTTATTGCTATAACTGGCTATGGATTTGTATAGGTATGTATCATGTGTTGTTGGTTGTCCAACAGAAGGATCAATTCCTCCATCTAAAGTCGCTTATGTAGCGAAGGAGCTTTATGAGATGGGTTGCTTTGAAATTTCTCTTGGAGACACGATCGGAGTTGCCACGCCCGGTAACAATTTAAACCTTTCTTTCTCAAAATCGAAATATAGATTGCTTTCATCTTCTTCGCTCTCTTATAGTATCCTCTGTTGGCACAGGGACTGTTGTTCCCATGCTTGAAGCTGTGATGGCTGTCGTTCCGGTGGACAAGCTTGCAGTCCACTTCCATGACACTTATGGACAATCACTTCCAAATATTCTAGTATCCCTCCAAGTAAGGAATCTTTTGAAGCTGAAGTTTGAGCCCGTTTGGAATGACTTTCTAAGTGTTCAAAATACTTCTCAAATAGATCCTCCTACATCTATATATAAACATTGGTTTATCAAGAATATGCAAGAAAAACACTTCGGATTGTTGATTCATCGCCAGAAATGACTTAGAAACAATAGTTCATTATCTAATGGATTTTTTCGTTCTAATACTCTATCCAAGAGTTATCGGTATTTATCAAATTTGTTCCTATTTAACAGAACATTATGATAATGACAGGGTTGAGAAAAATACACTTGAAAGTCATTTCAAACATATACTTGGTCCCTTCTAAACTTGCTTTCCAGATATATGGATGCAAGTTGCAAGCTTTGCCTAGGATTTCATTTCATTTGGGCCAACTTCAACCATTAACTGGTGTGTTGCTTTTATGAACAGATGGGGATTAGCACAATAGATTCCTCTGTTGCAGGTCTGGGTGGATGTCCATATGCAAAAGGAGCTTCCGGGAATGTTGCAACTGAGGATGTGGTGTACATGCTCCACGGACTTGGCATAAAAACCAATGTGGATTTGGCAAAGGTCATGTCTGCTGGGAACTTCATCAGCAACCATTTGGGGCGCCCATCGGGTTCGAAGACTTCCATTGCCTTCAACCAACTTGCAGCCGATGCTTCCAAGATGTGACACATCTTATTACTCATACATTTACACCTTACATTGAACGAATAATGAAGGGTTTCACTTCAGGAAGCTTTCTTATAGTTTCTATACTATTTTATCTGGCTGAATATGATGCAGCCCATATCTCAAACAACATAACTATTGTCTGTCATGAAGTATCAAAATTTATGGATGCGAGTCCTCCCATGATTTGGAGAGGTTATTATTTATCCCTTTTGTGTCGGTGGTCGGAATGGTTGAGATATTATCATGTTATGGAAAACTTTCTTGAAATTCACCTATTGGCGTTGGAATTCTCGACTCCACCTATTTCATTTATCAATGAAATTATTTCTCTTATCGAAAAAGATATTGTCACATCATATTGTATCGAGTAAAAATGCGTATAAGTATTAAACTACGGTCAAGCCAGAGTAAAAATGTATGTGAAAGAGAGTGTTTGCAGATTCCTTGAAAACAAGATTTTATCTGTTCCAAATCCTTGTTAGTAATTGAATCAGACTTGCACAATGTGGTCTATGGAGAGAAGATAATATATGCAATACAAGACTTATTAAGCAGAAAACCATACTATTCTGTGGAACTGCAACTGAACGACTCCAGAAAGCTCCGGGCAGCATCTGAACTCAGTTCTTCGTTAACCTGTAGTCATATTGATTATAGGATTTTCATTCTAATGTCAATGGAGGATGAAAAACTAAATATCTAATTGCACGACATGTTCTGAATGACTTACAAGTTTATTGTGAATCTGTTGAAATGAGTTACAGAATCTCTCTGCTTCAAGCTTGCCCACCTGCG

mRNA sequence

AGATAAAAAATTAATTTGAAGAGAGGAAGCTTGAGAGAATGAAGAATTGACCAACTTCCAACTGACAACAACCTACCACCTCTCCTTCCCCAGAACAGAAGAAACCACAATTTATTGATACTGACCTAAATTCTGCGATGGAAAAGAGAGAGAAAATATATGCAAATTTCCGCATTTACGACGTCCACCAACCCAACAAACACAGGCAAATTTCAATTTCATTTTTGTTCGCAACGCGGTTTGTTGCTCTTCAATTTCATCGCATCGGTTACCATTTCATCATCTCTACCGCGCTGAAGCGTTCCTTTCCCGATTTCCCGCTTTAGTTCTGGTTTTTGCTTCTGCCTCCATAATGTCGAGTTTGGAGGAGCCACTTGGTCTTGACAAGTTGCCAAGCATGAGCACAATTGACCGGCTACAAAGATTTTCATCTGGTGCCTGCCGACCAATAGGAGATGACATGGGAATGGGTATCTGCTGGATTCAAGGGGGGAGAAGCAGCTCATCCAATACTTGCAAGGAATATGATGAGGATGCTAGAGAGACGTTTCCGTGGAGAAGACATAGGAAAGACACATCCCAAAATGGCTCTGTCAATAGGAGGACGATGAGCGCAGGCCCGGAAAAATTAGTATCTGGAAATTTTTGTGATTCACATTGTTCTCCAGGTCATGAATACAAGACTAAGAGTAGTAGCAACAACATACAGCATACTACAAATAAGTTTTTGAAAGATATACCAAAGTTTGTGAAGATAGTAGAAGTTGGTCCAAGGGATGGGCTTCAAAATGAGAAGGGTATGGTACCTACATCTGTGAAGGTGGAATTGATCCATAGACTAGTATCTTCAGGATTGCCTGTGGTTGAGGCTACCAGTTTTGTATCACCTACACGGGTGCCTCAGTTATCTGATGCAGCTGAAGTCATGGAAGCCGTACGTAATTTGGAAGGTGCTAGGTTGCCAGTTTTAACTCCTAATTTGAAAGGGTTTCGAGCAGCTGTTGCGGCTGGAGCAAAGGAAGTGGCAGTCTTTGCATCAGCCTCTGAATTATTTTCAAAATCTAACATCAATTGTAGCATTGAAGAAAGTCTTGATCGTTACCGAGCGGTAACTTCTGCTGCAAAAGAGCTTGCAATCCCTGTTCGAGGGTATGTATCATGTGTTGTTGGTTGTCCAACAGAAGGATCAATTCCTCCATCTAAAGTCGCTTATGTAGCGAAGGAGCTTTATGAGATGGGTTGCTTTGAAATTTCTCTTGGAGACACGATCGGAGTTGCCACGCCCGGGACTGTTGTTCCCATGCTTGAAGCTGTGATGGCTGTCGTTCCGGTGGACAAGCTTGCAGTCCACTTCCATGACACTTATGGACAATCACTTCCAAATATTCTAGTATCCCTCCAAATGGGGATTAGCACAATAGATTCCTCTGTTGCAGGTCTGGGTGGATGTCCATATGCAAAAGGAGCTTCCGGGAATGTTGCAACTGAGGATGTGGTGTACATGCTCCACGGACTTGGCATAAAAACCAATGTGGATTTGGCAAAGGTCATGTCTGCTGGGAACTTCATCAGCAACCATTTGGGGCGCCCATCGGGTTCGAAGACTTCCATTGCCTTCAACCAACTTGCAGCCGATGCTTCCAAGATGTGACACATCTTATTACTCATACATTTACACCTTACATTGAACGAATAATGAAGGGTTTCACTTCAGGAAGCTTTCTTATAGTTTCTATACTATTTTATCTGGCTGAATATGATGCAGCCCATATCTCAAACAACATAACTATTGTCTGTCATGAAGTATCAAAATTTATGGATGCGAGTCCTCCCATGATTTGGAGAGGTTATTATTTATCCCTTTTGTGTCGGTGGTCGGAATGGTTGAGATATTATCATGTTATGGAAAACTTTCTTGAAATTCACCTATTGGCGTTGGAATTCTCGACTCCACCTATTTCATTTATCAATGAAATTATTTCTCTTATCGAAAAAGATATTGTCACATCATATTGTATCGAGTAAAAATGCGTATAAGTATTAAACTACGGTCAAGCCAGAGTAAAAATGTATGTGAAAGAGAGTGTTTGCAGATTCCTTGAAAACAAGATTTTATCTGTTCCAAATCCTTGTTAGTAATTGAATCAGACTTGCACAATGTGGTCTATGGAGAGAAGATAATATATGCAATACAAGACTTATTAAGCAGAAAACCATACTATTCTGTGGAACTGCAACTGAACGACTCCAGAAAGCTCCGGGCAGCATCTGAACTCAGTTCTTCGTTAACCTGTAGTCATATTGATTATAGGATTTTCATTCTAATGTCAATGGAGGATGAAAAACTAAATATCTAATTGCACGACATGTTCTGAATGACTTACAAGTTTATTGTGAATCTGTTGAAATGAGTTACAGAATCTCTCTGCTTCAAGCTTGCCCACCTGCG

Coding sequence (CDS)

ATGTCGAGTTTGGAGGAGCCACTTGGTCTTGACAAGTTGCCAAGCATGAGCACAATTGACCGGCTACAAAGATTTTCATCTGGTGCCTGCCGACCAATAGGAGATGACATGGGAATGGGTATCTGCTGGATTCAAGGGGGGAGAAGCAGCTCATCCAATACTTGCAAGGAATATGATGAGGATGCTAGAGAGACGTTTCCGTGGAGAAGACATAGGAAAGACACATCCCAAAATGGCTCTGTCAATAGGAGGACGATGAGCGCAGGCCCGGAAAAATTAGTATCTGGAAATTTTTGTGATTCACATTGTTCTCCAGGTCATGAATACAAGACTAAGAGTAGTAGCAACAACATACAGCATACTACAAATAAGTTTTTGAAAGATATACCAAAGTTTGTGAAGATAGTAGAAGTTGGTCCAAGGGATGGGCTTCAAAATGAGAAGGGTATGGTACCTACATCTGTGAAGGTGGAATTGATCCATAGACTAGTATCTTCAGGATTGCCTGTGGTTGAGGCTACCAGTTTTGTATCACCTACACGGGTGCCTCAGTTATCTGATGCAGCTGAAGTCATGGAAGCCGTACGTAATTTGGAAGGTGCTAGGTTGCCAGTTTTAACTCCTAATTTGAAAGGGTTTCGAGCAGCTGTTGCGGCTGGAGCAAAGGAAGTGGCAGTCTTTGCATCAGCCTCTGAATTATTTTCAAAATCTAACATCAATTGTAGCATTGAAGAAAGTCTTGATCGTTACCGAGCGGTAACTTCTGCTGCAAAAGAGCTTGCAATCCCTGTTCGAGGGTATGTATCATGTGTTGTTGGTTGTCCAACAGAAGGATCAATTCCTCCATCTAAAGTCGCTTATGTAGCGAAGGAGCTTTATGAGATGGGTTGCTTTGAAATTTCTCTTGGAGACACGATCGGAGTTGCCACGCCCGGGACTGTTGTTCCCATGCTTGAAGCTGTGATGGCTGTCGTTCCGGTGGACAAGCTTGCAGTCCACTTCCATGACACTTATGGACAATCACTTCCAAATATTCTAGTATCCCTCCAAATGGGGATTAGCACAATAGATTCCTCTGTTGCAGGTCTGGGTGGATGTCCATATGCAAAAGGAGCTTCCGGGAATGTTGCAACTGAGGATGTGGTGTACATGCTCCACGGACTTGGCATAAAAACCAATGTGGATTTGGCAAAGGTCATGTCTGCTGGGAACTTCATCAGCAACCATTTGGGGCGCCCATCGGGTTCGAAGACTTCCATTGCCTTCAACCAACTTGCAGCCGATGCTTCCAAGATGTGA

Protein sequence

MSSLEEPLGLDKLPSMSTIDRLQRFSSGACRPIGDDMGMGICWIQGGRSSSSNTCKEYDEDARETFPWRRHRKDTSQNGSVNRRTMSAGPEKLVSGNFCDSHCSPGHEYKTKSSSNNIQHTTNKFLKDIPKFVKIVEVGPRDGLQNEKGMVPTSVKVELIHRLVSSGLPVVEATSFVSPTRVPQLSDAAEVMEAVRNLEGARLPVLTPNLKGFRAAVAAGAKEVAVFASASELFSKSNINCSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEGSIPPSKVAYVAKELYEMGCFEISLGDTIGVATPGTVVPMLEAVMAVVPVDKLAVHFHDTYGQSLPNILVSLQMGISTIDSSVAGLGGCPYAKGASGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFISNHLGRPSGSKTSIAFNQLAADASKM

Homology

[Close]

BLAST of Cp4.1LG16g08450 vs. Swiss-Prot
Match: HMGCL_ARATH (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Arabidopsis thaliana GN=HMGCL PE=1 SV=2)

HSP 1 Score: 597.0 bits (1538), Expect = 1.6e-169
Identity = 310/434 (71.43%), Postives = 359/434 (82.72%), Query Frame = 1


Query: 1   MSSLEEPLGLDKLPSMSTIDRLQRFSSGACRPIGDDMGMGICWIQGGRSSSSNTCKEYDE 60
           MSSLEEPL  DKLPSMST+DR+QRFSSGACRP  DD+GMG  WI+G   ++SN+C + D+
Sbjct: 36  MSSLEEPLSFDKLPSMSTMDRIQRFSSGACRP-RDDVGMGHRWIEGRDCTTSNSCIDDDK 95

Query: 61  D-ARETFPWRRHRKDTSQNGSVNRRTMSAGPEKLVSGNFCDSHCSPGHEYKTKSSSNNIQ 120
             A+E+FPWRRH +  S+   + R    AG    VSG   +S      +Y T S+ N   
Sbjct: 96  SFAKESFPWRRHTRKLSEGEHMFRNISFAGRTSTVSGTLRESKSFKEQKYSTFSNENGTS 155

Query: 121 HTTNKFLKDIPKFVKIVEVGPRDGLQNEKGMVPTSVKVELIHRLVSSGLPVVEATSFVSP 180
           H +NK  K IPKFVKIVEVGPRDGLQNEK +VPTSVKVELI RLVSSGLPVVEATSFVSP
Sbjct: 156 HISNKISKGIPKFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSSGLPVVEATSFVSP 215

Query: 181 TRVPQLSDAAEVMEAVRNLEGARLPVLTPNLKGFRAAVAAGAKEVAVFASASELFSKSNI 240
             VPQL+DA +VM+AV  L+GARLPVLTPNLKGF+AAV+AGAKEVA+FASASE FS SNI
Sbjct: 216 KWVPQLADAKDVMDAVNTLDGARLPVLTPNLKGFQAAVSAGAKEVAIFASASESFSLSNI 275

Query: 241 NCSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEGSIPPSKVAYVAKELYEMGCFE 300
           NC+IEESL RYR V +AAKE ++PVRGYVSCVVGCP EG + PSKVAYV KELY+MGCFE
Sbjct: 276 NCTIEESLLRYRVVATAAKEHSVPVRGYVSCVVGCPVEGPVLPSKVAYVVKELYDMGCFE 335

Query: 301 ISLGDTIGVATPGTVVPMLEAVMAVVPVDKLAVHFHDTYGQSLPNILVSLQMGISTIDSS 360
           ISLGDTIG+ TPG+VVPMLEAVMAVVP DKLAVHFHDTYGQ+L NILVSLQMGIS +DSS
Sbjct: 336 ISLGDTIGIGTPGSVVPMLEAVMAVVPADKLAVHFHDTYGQALANILVSLQMGISIVDSS 395

Query: 361 VAGLGGCPYAKGASGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFISNHLGRPSGSKTS 420
           +AGLGGCPYAKGASGNVATEDVVYML+GLG+ TNVDL K+++AG+FIS HLGRP+GSK +
Sbjct: 396 IAGLGGCPYAKGASGNVATEDVVYMLNGLGVHTNVDLGKLIAAGDFISKHLGRPNGSKAA 455

Query: 421 IAFN-QLAADASKM 433
           +A N ++ ADASK+
Sbjct: 456 VALNRRITADASKI 468

[Close]

BLAST of Cp4.1LG16g08450 vs. Swiss-Prot
Match: HMGCL_CHICK (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Gallus gallus GN=HMGCL PE=1 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.3e-107
Identity = 197/292 (67.47%), Postives = 237/292 (81.16%), Query Frame = 1


Query: 130 PKFVKIVEVGPRDGLQNEKGMVPTSVKVELIHRLVSSGLPVVEATSFVSPTRVPQLSDAA 189
           P+ VK+VEVGPRDGLQNEK +VPT VK+ LI  L  +GLPV+EATSFVSP  VPQ++D A
Sbjct: 3   PQRVKVVEVGPRDGLQNEKSVVPTPVKIRLIDMLSETGLPVIEATSFVSPRWVPQMADHA 62

Query: 190 EVMEAVRNLEGARLPVLTPNLKGFRAAVAAGAKEVAVFASASELFSKSNINCSIEESLDR 249
           EVM+ +  L G   PVLTPNLKGF+AAVAAGAKEV++F +ASELF+K NINCSIEESL+R
Sbjct: 63  EVMQGINKLPGVSYPVLTPNLKGFQAAVAAGAKEVSIFGAASELFTKKNINCSIEESLER 122

Query: 250 YRAVTSAAKELAIPVRGYVSCVVGCPTEGSIPPSKVAYVAKELYEMGCFEISLGDTIGVA 309
           +  V +AA+  +IPVRGYVSCV+GCP EG+I  +KVA V+K++Y MGC+EISLGD IG+ 
Sbjct: 123 FSEVMNAARAASIPVRGYVSCVLGCPYEGNISAAKVAEVSKKMYSMGCYEISLGDRIGIG 182

Query: 310 TPGTVVPMLEAVMAVVPVDKLAVHFHDTYGQSLPNILVSLQMGISTIDSSVAGLGGCPYA 369
           TPG++  ML AVM  VPV  LAVH HDTYGQ+L NILV+LQMG+S +D+SVAGLGGCPYA
Sbjct: 183 TPGSMKEMLAAVMKEVPVGALAVHCHDTYGQALANILVALQMGVSVVDASVAGLGGCPYA 242

Query: 370 KGASGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFISNHLGRPSGSKTSIA 422
           +GASGNVATED+VYML+GLGI T VDL K+M  G FI N L R + SK S A
Sbjct: 243 QGASGNVATEDLVYMLNGLGIHTGVDLQKLMDTGTFICNALNRRTNSKVSQA 294

[Close]

BLAST of Cp4.1LG16g08450 vs. Swiss-Prot
Match: HMGC2_DANRE (3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Danio rerio GN=hmgcll1 PE=2 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 2.3e-104
Identity = 190/296 (64.19%), Postives = 232/296 (78.38%), Query Frame = 1


Query: 126 LKDIPKFVKIVEVGPRDGLQNEKGMVPTSVKVELIHRLVSSGLPVVEATSFVSPTRVPQL 185
           L  +P +VKIVEVGPRDGLQNEK +VPT VK++LI  L  +GLPV+EATSFVS   V Q+
Sbjct: 36  LPKLPVYVKIVEVGPRDGLQNEKEIVPTEVKIQLIDLLSQTGLPVIEATSFVSSKWVAQM 95

Query: 186 SDAAEVMEAVRNLEGARLPVLTPNLKGFRAAVAAGAKEVAVFASASELFSKSNINCSIEE 245
           +D   V++ ++     R PVLTPN++GF+AAVAAGA EVAVF SASE FS+ NINCSIEE
Sbjct: 96  ADHTAVLKGIKRSPDVRYPVLTPNIQGFQAAVAAGANEVAVFGSASETFSRKNINCSIEE 155

Query: 246 SLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEGSIPPSKVAYVAKELYEMGCFEISLGDT 305
           SL R+  V SAAK+  IPVRGYVSC +GCP EG + PS+V  VAK L+E+GC+E+SLGDT
Sbjct: 156 SLQRFEQVVSAAKQEGIPVRGYVSCALGCPYEGQVKPSQVTKVAKRLFELGCYEVSLGDT 215

Query: 306 IGVATPGTVVPMLEAVMAVVPVDKLAVHFHDTYGQSLPNILVSLQMGISTIDSSVAGLGG 365
           IGV T G++  ML  V+  VP   LAVH HDTYGQ+LPNIL++LQMG+S +D+SVAGLGG
Sbjct: 216 IGVGTAGSMAEMLSDVLTEVPAGALAVHCHDTYGQALPNILIALQMGVSVVDASVAGLGG 275

Query: 366 CPYAKGASGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFISNHLGRPSGSKTSIA 422
           CP+AKGASGNV+TED++YMLHGLGI+T VDL KVM AG+FI   L R + SK S A
Sbjct: 276 CPFAKGASGNVSTEDLLYMLHGLGIETGVDLLKVMEAGDFICKALNRKTNSKVSQA 331

[Close]

BLAST of Cp4.1LG16g08450 vs. Swiss-Prot
Match: HMGC2_MOUSE (3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Mus musculus GN=Hmgcll1 PE=2 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 4.0e-104
Identity = 189/296 (63.85%), Postives = 234/296 (79.05%), Query Frame = 1


Query: 126 LKDIPKFVKIVEVGPRDGLQNEKGMVPTSVKVELIHRLVSSGLPVVEATSFVSPTRVPQL 185
           L  +P++VKIVEVGPRDGLQNEK +VPT +K+ELI++L  +GL V+E TSFVS   VPQ+
Sbjct: 41  LPGLPEYVKIVEVGPRDGLQNEKVIVPTDIKIELINQLSQTGLSVIEVTSFVSSRWVPQM 100

Query: 186 SDAAEVMEAVRNLEGARLPVLTPNLKGFRAAVAAGAKEVAVFASASELFSKSNINCSIEE 245
           +D AEVM  +R   G R PVLTPNL+GF+ AVAAGA E+AVF +ASE FSK NINCSIEE
Sbjct: 101 ADHAEVMRGIRQYPGVRYPVLTPNLQGFQHAVAAGATEIAVFGAASESFSKKNINCSIEE 160

Query: 246 SLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEGSIPPSKVAYVAKELYEMGCFEISLGDT 305
           S+ R++ V S+A+ + IPVRGYVSC +GCP EGSI P KV  V+K LY MGC+EISLGDT
Sbjct: 161 SMGRFQEVISSARHMDIPVRGYVSCALGCPYEGSITPQKVTEVSKRLYGMGCYEISLGDT 220

Query: 306 IGVATPGTVVPMLEAVMAVVPVDKLAVHFHDTYGQSLPNILVSLQMGISTIDSSVAGLGG 365
           IGV TPG++  MLE+VM  +P   LAVH HDTYGQ+L NIL +LQMGI+ +DS+V+GLGG
Sbjct: 221 IGVGTPGSMKMMLESVMKEIPPGALAVHCHDTYGQALANILTALQMGINVVDSAVSGLGG 280

Query: 366 CPYAKGASGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFISNHLGRPSGSKTSIA 422
           CPYAKGASGNVATED++YML+G+G+ T VDL KVM AG FI   + + + SK + A
Sbjct: 281 CPYAKGASGNVATEDLIYMLNGMGLNTGVDLYKVMEAGEFICKAVNKTTNSKVAQA 336

[Close]

BLAST of Cp4.1LG16g08450 vs. Swiss-Prot
Match: HMGCL_BOVIN (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Bos taurus GN=HMGCL PE=2 SV=2)

HSP 1 Score: 378.3 bits (970), Expect = 1.2e-103
Identity = 193/292 (66.10%), Postives = 229/292 (78.42%), Query Frame = 1


Query: 130 PKFVKIVEVGPRDGLQNEKGMVPTSVKVELIHRLVSSGLPVVEATSFVSPTRVPQLSDAA 189
           PK VKIVEVGPRDGLQNEK +VPT VK++LI  L  +GLPVVEATSFVSP  VPQ++D A
Sbjct: 30  PKQVKIVEVGPRDGLQNEKNIVPTPVKIKLIDMLSEAGLPVVEATSFVSPKWVPQMADHA 89

Query: 190 EVMEAVRNLEGARLPVLTPNLKGFRAAVAAGAKEVAVFASASELFSKSNINCSIEESLDR 249
           EV++ ++   G   PVLTPN KGF+AAVAAGAKEVA+F +ASELF+K NINCSI+ESL R
Sbjct: 90  EVLKGIQKFPGVNYPVLTPNFKGFQAAVAAGAKEVAIFGAASELFTKKNINCSIDESLQR 149

Query: 250 YRAVTSAAKELAIPVRGYVSCVVGCPTEGSIPPSKVAYVAKELYEMGCFEISLGDTIGVA 309
           +  +  AA+   I VRGYVSCV+GCP EG I P+KVA V K+LY MGC+EISLGDTIGV 
Sbjct: 150 FDEILKAARAAGISVRGYVSCVLGCPYEGKISPAKVAEVTKKLYSMGCYEISLGDTIGVG 209

Query: 310 TPGTVVPMLEAVMAVVPVDKLAVHFHDTYGQSLPNILVSLQMGISTIDSSVAGLGGCPYA 369
           TPG +  ML AV+  VPV  LAVH HDTYGQ+L N L +LQMG+S +DSSVAGLGGCPYA
Sbjct: 210 TPGAMKDMLSAVLQEVPVTALAVHCHDTYGQALANTLTALQMGVSVMDSSVAGLGGCPYA 269

Query: 370 KGASGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFISNHLGRPSGSKTSIA 422
           +GASGN+ATED+VYML GLGI T V+L K++ AG FI   L R + SK + A
Sbjct: 270 QGASGNLATEDLVYMLAGLGIHTGVNLQKLLEAGAFICQALNRRTNSKVAQA 321

[Close]

BLAST of Cp4.1LG16g08450 vs. TrEMBL
Match: A0A0A0KEI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G429100 PE=4 SV=1)

HSP 1 Score: 783.9 bits (2023), Expect = 1.0e-223
Identity = 394/432 (91.20%), Postives = 414/432 (95.83%), Query Frame = 1


Query: 1   MSSLEEPLGLDKLPSMSTIDRLQRFSSGACRPIGDDMGMGICWIQGGRSSSSNTCKEYDE 60
           MSSLEEPLGLDKLPSMSTIDR+QRFSS ACRPIGDDMGMGICWIQGGRSSSSN+CKEYDE
Sbjct: 1   MSSLEEPLGLDKLPSMSTIDRIQRFSSSACRPIGDDMGMGICWIQGGRSSSSNSCKEYDE 60

Query: 61  DARETFPWRRHRKDTSQNGSVNRRTMSAGPEKLVSGNFCDSHCSPGHEYKTKSSSNNIQH 120
           +  +TFPWRRHRK+TSQNG VNRRT SAG +   S NFC+SHCSPGHEYKTKS+S+NIQH
Sbjct: 61  NGGDTFPWRRHRKNTSQNGFVNRRTTSAGSKIFASENFCESHCSPGHEYKTKSTSDNIQH 120

Query: 121 TTNKFLKDIPKFVKIVEVGPRDGLQNEKGMVPTSVKVELIHRLVSSGLPVVEATSFVSPT 180
            TNKFLKDIPKFVKIVEVGPRDGLQNEK MVPTSVKVELIHRLVSSGLPVVEATSFVSPT
Sbjct: 121 MTNKFLKDIPKFVKIVEVGPRDGLQNEKNMVPTSVKVELIHRLVSSGLPVVEATSFVSPT 180

Query: 181 RVPQLSDAAEVMEAVRNLEGARLPVLTPNLKGFRAAVAAGAKEVAVFASASELFSKSNIN 240
           RVPQLSDAAEVMEAVRNLEGARLPVLTPNLK FRAA+AAGAKEVAVFASASE FSK+NIN
Sbjct: 181 RVPQLSDAAEVMEAVRNLEGARLPVLTPNLKSFRAAIAAGAKEVAVFASASESFSKANIN 240

Query: 241 CSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEGSIPPSKVAYVAKELYEMGCFEI 300
           CSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEG++ PS VAYVAKELYEMGCFEI
Sbjct: 241 CSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEGAVSPSNVAYVAKELYEMGCFEI 300

Query: 301 SLGDTIGVATPGTVVPMLEAVMAVVPVDKLAVHFHDTYGQSLPNILVSLQMGISTIDSSV 360
           SLGDTIGVATPGTVVPMLEAVM VVPVDKLAVHFHDTYGQSLPNIL+SLQMGISTIDSSV
Sbjct: 301 SLGDTIGVATPGTVVPMLEAVMGVVPVDKLAVHFHDTYGQSLPNILISLQMGISTIDSSV 360

Query: 361 AGLGGCPYAKGASGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFISNHLGRPSGSKTSI 420
           AGLGGCPYAKGA+GNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFI+NHLGRPSGSKT+I
Sbjct: 361 AGLGGCPYAKGATGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFINNHLGRPSGSKTAI 420

Query: 421 AFNQLAADASKM 433
           A N++AAD+SKM
Sbjct: 421 ALNRVAADSSKM 432

[Close]

BLAST of Cp4.1LG16g08450 vs. TrEMBL
Match: B9HNI0_POPTR (Putative hydroxymethylglutaryl-CoA lyase family protein OS=Populus trichocarpa GN=POPTR_0009s07280g PE=4 SV=1)

HSP 1 Score: 661.0 bits (1704), Expect = 1.0e-186
Identity = 337/432 (78.01%), Postives = 378/432 (87.50%), Query Frame = 1


Query: 1   MSSLEEPLGLDKLPSMSTIDRLQRFSSGACRPIGDDMGMGICWIQGGRSSSSNTCKEYDE 60
           MSSLEEPLG DKLPSM+TI+R+QRFSSGACRP  DD+GMG CWI+G   SSSN+C+E  E
Sbjct: 1   MSSLEEPLGFDKLPSMNTIERIQRFSSGACRPRADDIGMGHCWIEGRICSSSNSCEEDYE 60

Query: 61  DARETFPWRRHRKDTSQNGSVNRRTMSAGPEKLVSGNFCDSHCSPGHEYKTKSSSNNIQH 120
             RETFPW+RH +D  Q    NRRTMS+G + +VSG+ CDS   P H+Y +KS+  +I+ 
Sbjct: 61  YTRETFPWKRHTRDPCQG---NRRTMSSGSKNVVSGSSCDSRYFPDHQYSSKSNDKDIRD 120

Query: 121 TTNKFLKDIPKFVKIVEVGPRDGLQNEKGMVPTSVKVELIHRLVSSGLPVVEATSFVSPT 180
            TNKFLK IPKFVKIVEVGPRDGLQNEK +VPT VKVELIHRLVSSGLPVVEATSFVSP 
Sbjct: 121 ITNKFLKGIPKFVKIVEVGPRDGLQNEKNIVPTDVKVELIHRLVSSGLPVVEATSFVSPK 180

Query: 181 RVPQLSDAAEVMEAVRNLEGARLPVLTPNLKGFRAAVAAGAKEVAVFASASELFSKSNIN 240
            VPQL+DA +VMEAV  LE +RLPVLTPNLKGF AAVAAGAKEVAVFASASE FSKSNIN
Sbjct: 181 WVPQLADARDVMEAVHGLEASRLPVLTPNLKGFEAAVAAGAKEVAVFASASESFSKSNIN 240

Query: 241 CSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEGSIPPSKVAYVAKELYEMGCFEI 300
           CSI+ESL RYRAVT AAKEL+IPVRGYVSCV+GCP EGSI PSKVAYVAKEL++MGCFEI
Sbjct: 241 CSIKESLARYRAVTHAAKELSIPVRGYVSCVIGCPEEGSIHPSKVAYVAKELHDMGCFEI 300

Query: 301 SLGDTIGVATPGTVVPMLEAVMAVVPVDKLAVHFHDTYGQSLPNILVSLQMGISTIDSSV 360
           SLGDTIGV TPGTV  MLEAVMAVVPV+KLA+HFHDTYGQSLPNILVSLQMGIS +DSSV
Sbjct: 301 SLGDTIGVGTPGTVALMLEAVMAVVPVEKLAIHFHDTYGQSLPNILVSLQMGISVVDSSV 360

Query: 361 AGLGGCPYAKGASGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFISNHLGRPSGSKTSI 420
           AGLGGCPYAKGASGNVATEDVVYMLHGLG++TNVDLAK++SAG+FI   LGRPSGSKT++
Sbjct: 361 AGLGGCPYAKGASGNVATEDVVYMLHGLGVRTNVDLAKLLSAGDFICKQLGRPSGSKTAV 420

Query: 421 AFNQLAADASKM 433
           A +++ ADASK+
Sbjct: 421 ALSRVTADASKI 429

[Close]

BLAST of Cp4.1LG16g08450 vs. TrEMBL
Match: A0A067LFA7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22742 PE=4 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 6.5e-186
Identity = 337/435 (77.47%), Postives = 379/435 (87.13%), Query Frame = 1


Query: 1   MSSLEEPLGLDKLPSMSTIDRLQRFSSGACRPIGDDMGMGICWIQGGRSSSSNTCKE-YD 60
           MSS+EEPLGLDKLPSMSTIDR+QRFSSGACRP  DD+GMG  WI+G   SSSN+C++ Y+
Sbjct: 1   MSSVEEPLGLDKLPSMSTIDRIQRFSSGACRPSADDVGMGNFWIEGRSCSSSNSCEDNYE 60

Query: 61  EDARETFPWRRHRKDTSQNGSVNRRTMSAGPEKLVSGNFCDSHCSPGHEYKTKSSSNN-- 120
           E  RETFPW+RH +D  Q  S NRRTMS G   +  G   DS C P  +Y +KS SN+  
Sbjct: 61  EYTRETFPWKRHTRDLCQGDSFNRRTMSLGRNHVARGTGQDSRCLPNRQYNSKSKSNDKD 120

Query: 121 IQHTTNKFLKDIPKFVKIVEVGPRDGLQNEKGMVPTSVKVELIHRLVSSGLPVVEATSFV 180
           +++ TNKFLK IP FVKIVEVGPRDGLQNEK +VPT VK+ELIHRLVSSGLPVVEATSFV
Sbjct: 121 MRNLTNKFLKGIPNFVKIVEVGPRDGLQNEKNIVPTDVKIELIHRLVSSGLPVVEATSFV 180

Query: 181 SPTRVPQLSDAAEVMEAVRNLEGARLPVLTPNLKGFRAAVAAGAKEVAVFASASELFSKS 240
           SP  VPQL+DA +VMEAV+NLEG+RLPVLTPNLKGF AAVAAGAKEVA+FASASE FSKS
Sbjct: 181 SPKWVPQLADARDVMEAVQNLEGSRLPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKS 240

Query: 241 NINCSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEGSIPPSKVAYVAKELYEMGC 300
           NINCSIEESL RYRAVT+AAKE  IPVRGYVSCVVGCP EG+I  SKVAYVAKELY+MGC
Sbjct: 241 NINCSIEESLARYRAVTNAAKERGIPVRGYVSCVVGCPVEGAISLSKVAYVAKELYDMGC 300

Query: 301 FEISLGDTIGVATPGTVVPMLEAVMAVVPVDKLAVHFHDTYGQSLPNILVSLQMGISTID 360
           FEISLGDTIGV TPGTVVPMLEAVMAVVP +KLAVHFHDTYGQSLPNIL+SLQMGIST+D
Sbjct: 301 FEISLGDTIGVGTPGTVVPMLEAVMAVVPAEKLAVHFHDTYGQSLPNILISLQMGISTVD 360

Query: 361 SSVAGLGGCPYAKGASGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFISNHLGRPSGSK 420
           SSVAGLGGCPYAKGASGNVATEDVVYML+GLG+KTNVDL K++SAG+FIS +LGR SGSK
Sbjct: 361 SSVAGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLPKLLSAGDFISKYLGRQSGSK 420

Query: 421 TSIAFNQLAADASKM 433
           T++A +++ ADASK+
Sbjct: 421 TAVALSRVTADASKI 435

[Close]

BLAST of Cp4.1LG16g08450 vs. TrEMBL
Match: W9QRW1_9ROSA (Hydroxymethylglutaryl-CoA lyase OS=Morus notabilis GN=L484_013547 PE=4 SV=1)

HSP 1 Score: 649.8 bits (1675), Expect = 2.3e-183
Identity = 337/434 (77.65%), Postives = 376/434 (86.64%), Query Frame = 1


Query: 1   MSSLEEPLGLDKLPSMSTIDRLQRFSSGACRPIGDDMGMGICWIQGGRSSSSNTCKEYDE 60
           MSSLEEPLG DK+PSMSTIDR+QRFSSGACRP  D+MG G CWI+G   S+SN+C + D 
Sbjct: 1   MSSLEEPLGFDKVPSMSTIDRIQRFSSGACRPREDNMGFGNCWIEGRSCSTSNSCSD-DY 60

Query: 61  DARET--FPWRRHRKDTSQNGSVNRRTMSAGPEKLVSGNFCDSHCSPGHEYKTKSSSNNI 120
           + RET  FPW RH +D SQ  ++NRRT S G  + V+G  C S  S  H+YK KS+  + 
Sbjct: 61  EGRETEIFPWVRHTRDFSQGDTLNRRTSSLGRNQ-VTGTGCSSWYSSDHQYKPKSNDRDK 120

Query: 121 QHTTNKFLKDIPKFVKIVEVGPRDGLQNEKGMVPTSVKVELIHRLVSSGLPVVEATSFVS 180
           Q  TNKFLK +PKFVKIVEVGPRDGLQNEK +VPT+VK+ELIHRLVS GLPVVEATSFVS
Sbjct: 121 QDVTNKFLKSMPKFVKIVEVGPRDGLQNEKNIVPTAVKIELIHRLVSCGLPVVEATSFVS 180

Query: 181 PTRVPQLSDAAEVMEAVRNLEGARLPVLTPNLKGFRAAVAAGAKEVAVFASASELFSKSN 240
           P  VPQL+DA +VM AV+NLEGARLPVLTPNLKGF AAVAAGAKEVAVFASASE FSKSN
Sbjct: 181 PKWVPQLADAKDVMGAVQNLEGARLPVLTPNLKGFEAAVAAGAKEVAVFASASESFSKSN 240

Query: 241 INCSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEGSIPPSKVAYVAKELYEMGCF 300
           INCSIEESL RYRAVT AAKEL+IPVRGY+SCVVGCP EG+I PSKVAYVAKELY+MGCF
Sbjct: 241 INCSIEESLARYRAVTHAAKELSIPVRGYISCVVGCPVEGAIAPSKVAYVAKELYDMGCF 300

Query: 301 EISLGDTIGVATPGTVVPMLEAVMAVVPVDKLAVHFHDTYGQSLPNILVSLQMGISTIDS 360
           EISL DTIGV TPGTVVPMLEAVMAVVPV+KLAVHFHDTYGQSLPNILVSLQMGISTIDS
Sbjct: 301 EISLADTIGVGTPGTVVPMLEAVMAVVPVEKLAVHFHDTYGQSLPNILVSLQMGISTIDS 360

Query: 361 SVAGLGGCPYAKGASGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFISNHLGRPSGSKT 420
           S+AGLGGCPYAKGASGNVATEDVVYML+GLG+KTNVDL K++ AG+FIS  LGRPSGSK+
Sbjct: 361 SIAGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLTKLLKAGDFISKQLGRPSGSKS 420

Query: 421 SIAFNQLAADASKM 433
           +IA ++L ADASK+
Sbjct: 421 AIALSRLTADASKI 432

[Close]

BLAST of Cp4.1LG16g08450 vs. TrEMBL
Match: V4RY63_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005026mg PE=4 SV=1)

HSP 1 Score: 647.5 bits (1669), Expect = 1.1e-182
Identity = 334/433 (77.14%), Postives = 371/433 (85.68%), Query Frame = 1


Query: 1   MSSLEEPLGLDKLPSMSTIDRLQRFSSGACRPIGDDMGMGICWIQGGRSSSSNTC-KEYD 60
           MSSLEEPLGLDKLPSMSTIDR+QRFSS ACRP GD MGMG CWI+G   S+SN+  +EYD
Sbjct: 1   MSSLEEPLGLDKLPSMSTIDRIQRFSSNACRPSGDGMGMGSCWIEGSSCSTSNSYDEEYD 60

Query: 61  EDARETFPWRRHRKDTSQNGSVNRRTMSAGPEKLVSGNFCDSHCSPGHEYKTKSSSNNIQ 120
           E  RE FPWRRH +D S   S +RRT+S G    + G+ CD        Y +  +  +I+
Sbjct: 61  EYTREAFPWRRHTRDMSHGDSFSRRTVSLGRNHKMFGSACDI-------YSSNCNDKDIR 120

Query: 121 HTTNKFLKDIPKFVKIVEVGPRDGLQNEKGMVPTSVKVELIHRLVSSGLPVVEATSFVSP 180
             TNKFLK IP+ VKIVEVGPRDGLQNEK  VPT VKVELI RLVSSGLPVVEATSFVSP
Sbjct: 121 DITNKFLKGIPRSVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSP 180

Query: 181 TRVPQLSDAAEVMEAVRNLEGARLPVLTPNLKGFRAAVAAGAKEVAVFASASELFSKSNI 240
             VPQL+DA +VMEAVR+LEGARLPVLTPNLKGF AA+AAGAKEVA+FASASE FSKSNI
Sbjct: 181 KWVPQLADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNI 240

Query: 241 NCSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEGSIPPSKVAYVAKELYEMGCFE 300
           NCSIEESL RYRAV  AAK+L+IPVRGYVSCVVGCP EG+IPPSKVAYVAKEL++MGCFE
Sbjct: 241 NCSIEESLVRYRAVARAAKDLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFE 300

Query: 301 ISLGDTIGVATPGTVVPMLEAVMAVVPVDKLAVHFHDTYGQSLPNILVSLQMGISTIDSS 360
           ISLGDTIGV TPGTVVPMLEAVMAVVPV+KLAVHFHDTYGQSLPNIL+SLQMGIST+D S
Sbjct: 301 ISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHFHDTYGQSLPNILISLQMGISTVDCS 360

Query: 361 VAGLGGCPYAKGASGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFISNHLGRPSGSKTS 420
           VAGLGGCPYAKGASGNVATEDVVYML GLG++TNVDL K+M AG+FI+ HLGRPSGSKT+
Sbjct: 361 VAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGSKTA 420

Query: 421 IAFNQLAADASKM 433
           IA N++AADASK+
Sbjct: 421 IALNRIAADASKI 426

[Close]

BLAST of Cp4.1LG16g08450 vs. TAIR10
Match: AT2G26800.2 (AT2G26800.2 Aldolase superfamily protein)

HSP 1 Score: 597.0 bits (1538), Expect = 9.0e-171
Identity = 310/434 (71.43%), Postives = 359/434 (82.72%), Query Frame = 1


Query: 1   MSSLEEPLGLDKLPSMSTIDRLQRFSSGACRPIGDDMGMGICWIQGGRSSSSNTCKEYDE 60
           MSSLEEPL  DKLPSMST+DR+QRFSSGACRP  DD+GMG  WI+G   ++SN+C + D+
Sbjct: 36  MSSLEEPLSFDKLPSMSTMDRIQRFSSGACRP-RDDVGMGHRWIEGRDCTTSNSCIDDDK 95

Query: 61  D-ARETFPWRRHRKDTSQNGSVNRRTMSAGPEKLVSGNFCDSHCSPGHEYKTKSSSNNIQ 120
             A+E+FPWRRH +  S+   + R    AG    VSG   +S      +Y T S+ N   
Sbjct: 96  SFAKESFPWRRHTRKLSEGEHMFRNISFAGRTSTVSGTLRESKSFKEQKYSTFSNENGTS 155

Query: 121 HTTNKFLKDIPKFVKIVEVGPRDGLQNEKGMVPTSVKVELIHRLVSSGLPVVEATSFVSP 180
           H +NK  K IPKFVKIVEVGPRDGLQNEK +VPTSVKVELI RLVSSGLPVVEATSFVSP
Sbjct: 156 HISNKISKGIPKFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSSGLPVVEATSFVSP 215

Query: 181 TRVPQLSDAAEVMEAVRNLEGARLPVLTPNLKGFRAAVAAGAKEVAVFASASELFSKSNI 240
             VPQL+DA +VM+AV  L+GARLPVLTPNLKGF+AAV+AGAKEVA+FASASE FS SNI
Sbjct: 216 KWVPQLADAKDVMDAVNTLDGARLPVLTPNLKGFQAAVSAGAKEVAIFASASESFSLSNI 275

Query: 241 NCSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEGSIPPSKVAYVAKELYEMGCFE 300
           NC+IEESL RYR V +AAKE ++PVRGYVSCVVGCP EG + PSKVAYV KELY+MGCFE
Sbjct: 276 NCTIEESLLRYRVVATAAKEHSVPVRGYVSCVVGCPVEGPVLPSKVAYVVKELYDMGCFE 335

Query: 301 ISLGDTIGVATPGTVVPMLEAVMAVVPVDKLAVHFHDTYGQSLPNILVSLQMGISTIDSS 360
           ISLGDTIG+ TPG+VVPMLEAVMAVVP DKLAVHFHDTYGQ+L NILVSLQMGIS +DSS
Sbjct: 336 ISLGDTIGIGTPGSVVPMLEAVMAVVPADKLAVHFHDTYGQALANILVSLQMGISIVDSS 395

Query: 361 VAGLGGCPYAKGASGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFISNHLGRPSGSKTS 420
           +AGLGGCPYAKGASGNVATEDVVYML+GLG+ TNVDL K+++AG+FIS HLGRP+GSK +
Sbjct: 396 IAGLGGCPYAKGASGNVATEDVVYMLNGLGVHTNVDLGKLIAAGDFISKHLGRPNGSKAA 455

Query: 421 IAFN-QLAADASKM 433
           +A N ++ ADASK+
Sbjct: 456 VALNRRITADASKI 468

[Close]

BLAST of Cp4.1LG16g08450 vs. NCBI nr
Match: gi|659097451|ref|XP_008449633.1| (PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 784.6 bits (2025), Expect = 8.6e-224
Identity = 396/432 (91.67%), Postives = 416/432 (96.30%), Query Frame = 1


Query: 1   MSSLEEPLGLDKLPSMSTIDRLQRFSSGACRPIGDDMGMGICWIQGGRSSSSNTCKEYDE 60
           MSSLEEPLGLDKLPSMSTIDR+QRFSS ACRPIGDDMGMGICWIQGGRSSSSN+CKEYDE
Sbjct: 1   MSSLEEPLGLDKLPSMSTIDRIQRFSSSACRPIGDDMGMGICWIQGGRSSSSNSCKEYDE 60

Query: 61  DARETFPWRRHRKDTSQNGSVNRRTMSAGPEKLVSGNFCDSHCSPGHEYKTKSSSNNIQH 120
           DA +TFPWRRHRK+TSQNGSVNRRTMSAG +K  S NFC+ HCS GHEYKTKS+S+NIQH
Sbjct: 61  DAGDTFPWRRHRKNTSQNGSVNRRTMSAGSKKFASENFCEPHCSLGHEYKTKSTSDNIQH 120

Query: 121 TTNKFLKDIPKFVKIVEVGPRDGLQNEKGMVPTSVKVELIHRLVSSGLPVVEATSFVSPT 180
            TNKFLKDIPKFVKIVEVGPRDGLQNEK MVPTSVKVELIHRLVSSGLPVVEATSFVSPT
Sbjct: 121 MTNKFLKDIPKFVKIVEVGPRDGLQNEKNMVPTSVKVELIHRLVSSGLPVVEATSFVSPT 180

Query: 181 RVPQLSDAAEVMEAVRNLEGARLPVLTPNLKGFRAAVAAGAKEVAVFASASELFSKSNIN 240
           RVPQLSDAAEVMEAVRNLEGARLPVLTPNLKGFRAA+ AGAKEVAVFASASE FSK+NIN
Sbjct: 181 RVPQLSDAAEVMEAVRNLEGARLPVLTPNLKGFRAAITAGAKEVAVFASASESFSKANIN 240

Query: 241 CSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEGSIPPSKVAYVAKELYEMGCFEI 300
           CSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEG++ PSKVAYVAKELYEMGCFEI
Sbjct: 241 CSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEGAVSPSKVAYVAKELYEMGCFEI 300

Query: 301 SLGDTIGVATPGTVVPMLEAVMAVVPVDKLAVHFHDTYGQSLPNILVSLQMGISTIDSSV 360
           SLGDTIGVATPGTVV MLEAVMAVVPVDKLAVHFHDTYGQSLPNIL+SLQMGISTIDSSV
Sbjct: 301 SLGDTIGVATPGTVVAMLEAVMAVVPVDKLAVHFHDTYGQSLPNILISLQMGISTIDSSV 360

Query: 361 AGLGGCPYAKGASGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFISNHLGRPSGSKTSI 420
           AGLGGCPYAKGA+GNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFI++HLGR SGSKT+I
Sbjct: 361 AGLGGCPYAKGATGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFINSHLGRLSGSKTAI 420

Query: 421 AFNQLAADASKM 433
           A N++AAD+SKM
Sbjct: 421 ALNRVAADSSKM 432

[Close]

BLAST of Cp4.1LG16g08450 vs. NCBI nr
Match: gi|659097449|ref|XP_008449632.1| (PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 784.6 bits (2025), Expect = 8.6e-224
Identity = 396/432 (91.67%), Postives = 416/432 (96.30%), Query Frame = 1


Query: 1   MSSLEEPLGLDKLPSMSTIDRLQRFSSGACRPIGDDMGMGICWIQGGRSSSSNTCKEYDE 60
           MSSLEEPLGLDKLPSMSTIDR+QRFSS ACRPIGDDMGMGICWIQGGRSSSSN+CKEYDE
Sbjct: 37  MSSLEEPLGLDKLPSMSTIDRIQRFSSSACRPIGDDMGMGICWIQGGRSSSSNSCKEYDE 96

Query: 61  DARETFPWRRHRKDTSQNGSVNRRTMSAGPEKLVSGNFCDSHCSPGHEYKTKSSSNNIQH 120
           DA +TFPWRRHRK+TSQNGSVNRRTMSAG +K  S NFC+ HCS GHEYKTKS+S+NIQH
Sbjct: 97  DAGDTFPWRRHRKNTSQNGSVNRRTMSAGSKKFASENFCEPHCSLGHEYKTKSTSDNIQH 156

Query: 121 TTNKFLKDIPKFVKIVEVGPRDGLQNEKGMVPTSVKVELIHRLVSSGLPVVEATSFVSPT 180
            TNKFLKDIPKFVKIVEVGPRDGLQNEK MVPTSVKVELIHRLVSSGLPVVEATSFVSPT
Sbjct: 157 MTNKFLKDIPKFVKIVEVGPRDGLQNEKNMVPTSVKVELIHRLVSSGLPVVEATSFVSPT 216

Query: 181 RVPQLSDAAEVMEAVRNLEGARLPVLTPNLKGFRAAVAAGAKEVAVFASASELFSKSNIN 240
           RVPQLSDAAEVMEAVRNLEGARLPVLTPNLKGFRAA+ AGAKEVAVFASASE FSK+NIN
Sbjct: 217 RVPQLSDAAEVMEAVRNLEGARLPVLTPNLKGFRAAITAGAKEVAVFASASESFSKANIN 276

Query: 241 CSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEGSIPPSKVAYVAKELYEMGCFEI 300
           CSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEG++ PSKVAYVAKELYEMGCFEI
Sbjct: 277 CSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEGAVSPSKVAYVAKELYEMGCFEI 336

Query: 301 SLGDTIGVATPGTVVPMLEAVMAVVPVDKLAVHFHDTYGQSLPNILVSLQMGISTIDSSV 360
           SLGDTIGVATPGTVV MLEAVMAVVPVDKLAVHFHDTYGQSLPNIL+SLQMGISTIDSSV
Sbjct: 337 SLGDTIGVATPGTVVAMLEAVMAVVPVDKLAVHFHDTYGQSLPNILISLQMGISTIDSSV 396

Query: 361 AGLGGCPYAKGASGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFISNHLGRPSGSKTSI 420
           AGLGGCPYAKGA+GNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFI++HLGR SGSKT+I
Sbjct: 397 AGLGGCPYAKGATGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFINSHLGRLSGSKTAI 456

Query: 421 AFNQLAADASKM 433
           A N++AAD+SKM
Sbjct: 457 ALNRVAADSSKM 468

[Close]

BLAST of Cp4.1LG16g08450 vs. NCBI nr
Match: gi|449444847|ref|XP_004140185.1| (PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 783.9 bits (2023), Expect = 1.5e-223
Identity = 394/432 (91.20%), Postives = 414/432 (95.83%), Query Frame = 1


Query: 1   MSSLEEPLGLDKLPSMSTIDRLQRFSSGACRPIGDDMGMGICWIQGGRSSSSNTCKEYDE 60
           MSSLEEPLGLDKLPSMSTIDR+QRFSS ACRPIGDDMGMGICWIQGGRSSSSN+CKEYDE
Sbjct: 1   MSSLEEPLGLDKLPSMSTIDRIQRFSSSACRPIGDDMGMGICWIQGGRSSSSNSCKEYDE 60

Query: 61  DARETFPWRRHRKDTSQNGSVNRRTMSAGPEKLVSGNFCDSHCSPGHEYKTKSSSNNIQH 120
           +  +TFPWRRHRK+TSQNG VNRRT SAG +   S NFC+SHCSPGHEYKTKS+S+NIQH
Sbjct: 61  NGGDTFPWRRHRKNTSQNGFVNRRTTSAGSKIFASENFCESHCSPGHEYKTKSTSDNIQH 120

Query: 121 TTNKFLKDIPKFVKIVEVGPRDGLQNEKGMVPTSVKVELIHRLVSSGLPVVEATSFVSPT 180
            TNKFLKDIPKFVKIVEVGPRDGLQNEK MVPTSVKVELIHRLVSSGLPVVEATSFVSPT
Sbjct: 121 MTNKFLKDIPKFVKIVEVGPRDGLQNEKNMVPTSVKVELIHRLVSSGLPVVEATSFVSPT 180

Query: 181 RVPQLSDAAEVMEAVRNLEGARLPVLTPNLKGFRAAVAAGAKEVAVFASASELFSKSNIN 240
           RVPQLSDAAEVMEAVRNLEGARLPVLTPNLK FRAA+AAGAKEVAVFASASE FSK+NIN
Sbjct: 181 RVPQLSDAAEVMEAVRNLEGARLPVLTPNLKSFRAAIAAGAKEVAVFASASESFSKANIN 240

Query: 241 CSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEGSIPPSKVAYVAKELYEMGCFEI 300
           CSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEG++ PS VAYVAKELYEMGCFEI
Sbjct: 241 CSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEGAVSPSNVAYVAKELYEMGCFEI 300

Query: 301 SLGDTIGVATPGTVVPMLEAVMAVVPVDKLAVHFHDTYGQSLPNILVSLQMGISTIDSSV 360
           SLGDTIGVATPGTVVPMLEAVM VVPVDKLAVHFHDTYGQSLPNIL+SLQMGISTIDSSV
Sbjct: 301 SLGDTIGVATPGTVVPMLEAVMGVVPVDKLAVHFHDTYGQSLPNILISLQMGISTIDSSV 360

Query: 361 AGLGGCPYAKGASGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFISNHLGRPSGSKTSI 420
           AGLGGCPYAKGA+GNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFI+NHLGRPSGSKT+I
Sbjct: 361 AGLGGCPYAKGATGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFINNHLGRPSGSKTAI 420

Query: 421 AFNQLAADASKM 433
           A N++AAD+SKM
Sbjct: 421 ALNRVAADSSKM 432

[Close]

BLAST of Cp4.1LG16g08450 vs. NCBI nr
Match: gi|778716852|ref|XP_011657605.1| (PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 783.9 bits (2023), Expect = 1.5e-223
Identity = 394/432 (91.20%), Postives = 414/432 (95.83%), Query Frame = 1


Query: 1   MSSLEEPLGLDKLPSMSTIDRLQRFSSGACRPIGDDMGMGICWIQGGRSSSSNTCKEYDE 60
           MSSLEEPLGLDKLPSMSTIDR+QRFSS ACRPIGDDMGMGICWIQGGRSSSSN+CKEYDE
Sbjct: 37  MSSLEEPLGLDKLPSMSTIDRIQRFSSSACRPIGDDMGMGICWIQGGRSSSSNSCKEYDE 96

Query: 61  DARETFPWRRHRKDTSQNGSVNRRTMSAGPEKLVSGNFCDSHCSPGHEYKTKSSSNNIQH 120
           +  +TFPWRRHRK+TSQNG VNRRT SAG +   S NFC+SHCSPGHEYKTKS+S+NIQH
Sbjct: 97  NGGDTFPWRRHRKNTSQNGFVNRRTTSAGSKIFASENFCESHCSPGHEYKTKSTSDNIQH 156

Query: 121 TTNKFLKDIPKFVKIVEVGPRDGLQNEKGMVPTSVKVELIHRLVSSGLPVVEATSFVSPT 180
            TNKFLKDIPKFVKIVEVGPRDGLQNEK MVPTSVKVELIHRLVSSGLPVVEATSFVSPT
Sbjct: 157 MTNKFLKDIPKFVKIVEVGPRDGLQNEKNMVPTSVKVELIHRLVSSGLPVVEATSFVSPT 216

Query: 181 RVPQLSDAAEVMEAVRNLEGARLPVLTPNLKGFRAAVAAGAKEVAVFASASELFSKSNIN 240
           RVPQLSDAAEVMEAVRNLEGARLPVLTPNLK FRAA+AAGAKEVAVFASASE FSK+NIN
Sbjct: 217 RVPQLSDAAEVMEAVRNLEGARLPVLTPNLKSFRAAIAAGAKEVAVFASASESFSKANIN 276

Query: 241 CSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEGSIPPSKVAYVAKELYEMGCFEI 300
           CSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEG++ PS VAYVAKELYEMGCFEI
Sbjct: 277 CSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEGAVSPSNVAYVAKELYEMGCFEI 336

Query: 301 SLGDTIGVATPGTVVPMLEAVMAVVPVDKLAVHFHDTYGQSLPNILVSLQMGISTIDSSV 360
           SLGDTIGVATPGTVVPMLEAVM VVPVDKLAVHFHDTYGQSLPNIL+SLQMGISTIDSSV
Sbjct: 337 SLGDTIGVATPGTVVPMLEAVMGVVPVDKLAVHFHDTYGQSLPNILISLQMGISTIDSSV 396

Query: 361 AGLGGCPYAKGASGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFISNHLGRPSGSKTSI 420
           AGLGGCPYAKGA+GNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFI+NHLGRPSGSKT+I
Sbjct: 397 AGLGGCPYAKGATGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFINNHLGRPSGSKTAI 456

Query: 421 AFNQLAADASKM 433
           A N++AAD+SKM
Sbjct: 457 ALNRVAADSSKM 468

[Close]

BLAST of Cp4.1LG16g08450 vs. NCBI nr
Match: gi|743881150|ref|XP_011036394.1| (PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial [Populus euphratica])

HSP 1 Score: 661.8 bits (1706), Expect = 8.4e-187
Identity = 337/432 (78.01%), Postives = 379/432 (87.73%), Query Frame = 1


Query: 1   MSSLEEPLGLDKLPSMSTIDRLQRFSSGACRPIGDDMGMGICWIQGGRSSSSNTCKEYDE 60
           MSSLEEPLG DKLPSM+TI+R+QRFSSGACRP  DDMGMG CWI+G   SSSN+C+E  E
Sbjct: 1   MSSLEEPLGFDKLPSMNTIERIQRFSSGACRPRADDMGMGHCWIEGRTCSSSNSCEEDYE 60

Query: 61  DARETFPWRRHRKDTSQNGSVNRRTMSAGPEKLVSGNFCDSHCSPGHEYKTKSSSNNIQH 120
             RETFPW+RH +D+ Q    NRR++S+G + +VSG+ CDS   P H+Y +KS+  +I+ 
Sbjct: 61  YTRETFPWKRHTRDSCQG---NRRSVSSGSKNMVSGSSCDSRYFPDHQYSSKSNDKDIRG 120

Query: 121 TTNKFLKDIPKFVKIVEVGPRDGLQNEKGMVPTSVKVELIHRLVSSGLPVVEATSFVSPT 180
            TNKFLK IPKFVKIVEVGPRDGLQNEK +VPT VKVELIHRLVSSGLPVVEATSFVSP 
Sbjct: 121 ITNKFLKGIPKFVKIVEVGPRDGLQNEKNIVPTDVKVELIHRLVSSGLPVVEATSFVSPK 180

Query: 181 RVPQLSDAAEVMEAVRNLEGARLPVLTPNLKGFRAAVAAGAKEVAVFASASELFSKSNIN 240
            VPQL+DA +VMEAV  LE +RLPVLTPNLKGF AAVAAGAKEVAVFASASE FSKSNIN
Sbjct: 181 WVPQLADARDVMEAVHGLEASRLPVLTPNLKGFEAAVAAGAKEVAVFASASESFSKSNIN 240

Query: 241 CSIEESLDRYRAVTSAAKELAIPVRGYVSCVVGCPTEGSIPPSKVAYVAKELYEMGCFEI 300
           CSIEESL RYRAVT AAKEL+IPVRGYVSCV+GCP EGSI PSKVAYVAKEL++MGCFEI
Sbjct: 241 CSIEESLARYRAVTHAAKELSIPVRGYVSCVIGCPEEGSIHPSKVAYVAKELHDMGCFEI 300

Query: 301 SLGDTIGVATPGTVVPMLEAVMAVVPVDKLAVHFHDTYGQSLPNILVSLQMGISTIDSSV 360
           SLGDTIGV TPGTV  MLEAVMAVVPV+KLA+HFHDTYGQSLPNILVSLQMGIS +DSSV
Sbjct: 301 SLGDTIGVGTPGTVALMLEAVMAVVPVEKLAIHFHDTYGQSLPNILVSLQMGISVVDSSV 360

Query: 361 AGLGGCPYAKGASGNVATEDVVYMLHGLGIKTNVDLAKVMSAGNFISNHLGRPSGSKTSI 420
           AGLGGCPYAKGASGNVATEDVVYMLHGLG++TNVDLAK++SAG+FI   LGRPSGSKT++
Sbjct: 361 AGLGGCPYAKGASGNVATEDVVYMLHGLGVRTNVDLAKLLSAGDFICKQLGRPSGSKTAM 420

Query: 421 AFNQLAADASKM 433
           A +++ ADASK+
Sbjct: 421 ALSRVTADASKI 429

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g08450 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HMGCL_ARATH	1.6e-169	71.43	Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Arabidopsis thaliana GN=HMGCL ...	[more]
HMGCL_CHICK	1.3e-107	67.47	Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Gallus gallus GN=HMGCL PE=1 SV...	[more]
HMGC2_DANRE	2.3e-104	64.19	3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Danio rerio GN=hmgcll...	[more]
HMGC2_MOUSE	4.0e-104	63.85	3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Mus musculus GN=Hmgcl...	[more]
HMGCL_BOVIN	1.2e-103	66.10	Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Bos taurus GN=HMGCL PE=2 SV=2	[more]

BLAST of Cp4.1LG16g08450 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEI0_CUCSA	1.0e-223	91.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G429100 PE=4 SV=1	[more]
B9HNI0_POPTR	1.0e-186	78.01	Putative hydroxymethylglutaryl-CoA lyase family protein OS=Populus trichocarpa G...	[more]
A0A067LFA7_JATCU	6.5e-186	77.47	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22742 PE=4 SV=1	[more]
W9QRW1_9ROSA	2.3e-183	77.65	Hydroxymethylglutaryl-CoA lyase OS=Morus notabilis GN=L484_013547 PE=4 SV=1	[more]
V4RY63_9ROSI	1.1e-182	77.14	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005026mg PE=4 SV=1	[more]

BLAST of Cp4.1LG16g08450 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G26800.2	9.0e-171	71.43	Aldolase superfamily protein	[more]

BLAST of Cp4.1LG16g08450 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097451\|ref\|XP_008449633.1\|	8.6e-224	91.67	PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X2 [Cucumis me...	[more]
gi\|659097449\|ref\|XP_008449632.1\|	8.6e-224	91.67	PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1 [Cucumis me...	[more]
gi\|449444847\|ref\|XP_004140185.1\|	1.5e-223	91.20	PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X2 [Cucumis sa...	[more]
gi\|778716852\|ref\|XP_011657605.1\|	1.5e-223	91.20	PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1 [Cucumis sa...	[more]
gi\|743881150\|ref\|XP_011036394.1\|	8.4e-187	78.01	PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0004419	hydroxymethylglutaryl-CoA lyase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR013785	Aldolase_TIM
IPR000891	PYR_CT
IPR000138	HMG_CoA_lyase_AS

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046950	cellular ketone body metabolic process
biological_process	GO:0006550	isoleucine catabolic process
biological_process	GO:0006552	leucine catabolic process
biological_process	GO:0006574	valine catabolic process
biological_process	GO:0046951	ketone body biosynthetic process
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0004419	hydroxymethylglutaryl-CoA lyase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g08450.1	Cp4.1LG16g08450.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000138	Hydroxymethylglutaryl-CoA lyase, active site	PROSITE	PS01062	HMG_COA_LYASE	coord: 359..368 scor
IPR000891	Pyruvate carboxyltransferase	PFAM	PF00682	HMGL-like	coord: 133..406 score: 5.9
IPR000891	Pyruvate carboxyltransferase	PROFILE	PS50991	PYR_CT	coord: 133..400 score: 34
IPR013785	Aldolase-type TIM barrel	GENE3D	G3DSA:3.20.20.70		coord: 131..417 score: 3.2
None	No IPR available	PANTHER	PTHR10277	HOMOCITRATE SYNTHASE-RELATED	coord: 95..432 score: 6.0E
None	No IPR available	PANTHER	PTHR10277:SF40	PROTEIN Y71G12B.10	coord: 95..432 score: 6.0E
None	No IPR available	unknown	SSF51569	Aldolase	coord: 128..420 score: 2.64

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG16g08450	Cucsa.086850	Cucumber (Gy14) v1	cgycpeB0160
Cp4.1LG16g08450	CmaCh20G001230	Cucurbita maxima (Rimu)	cmacpeB564
Cp4.1LG16g08450	CmaCh02G012880	Cucurbita maxima (Rimu)	cmacpeB627
Cp4.1LG16g08450	CmoCh02G013280	Cucurbita moschata (Rifu)	cmocpeB576
Cp4.1LG16g08450	CmoCh20G001320	Cucurbita moschata (Rifu)	cmocpeB517
Cp4.1LG16g08450	Cla008590	Watermelon (97103) v1	cpewmB287
Cp4.1LG16g08450	Csa6G429100	Cucumber (Chinese Long) v2	cpecuB281
Cp4.1LG16g08450	MELO3C014547	Melon (DHL92) v3.5.1	cpemeB278
Cp4.1LG16g08450	ClCG02G022700	Watermelon (Charleston Gray)	cpewcgB255
Cp4.1LG16g08450	CSPI06G23690	Wild cucumber (PI 183967)	cpecpiB283
Cp4.1LG16g08450	Lsi10G011080	Bottle gourd (USVL1VR-Ls)	cpelsiB227
Cp4.1LG16g08450	MELO3C014547.2	Melon (DHL92) v3.6.1	cpemedB324
Cp4.1LG16g08450	CsaV3_6G038810	Cucumber (Chinese Long) v3	cpecucB0348
Cp4.1LG16g08450	Bhi10G000180	Wax gourd	cpewgoB0354
Cp4.1LG16g08450	CsGy6G023030	Cucumber (Gy14) v2	cgybcpeB755
Cp4.1LG16g08450	Carg02676	Silver-seed gourd	carcpeB1273
Cp4.1LG16g08450	Carg06867	Silver-seed gourd	carcpeB0733

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG16g08450	Cp4.1LG05g04640	Cucurbita pepo (Zucchini)	cpecpeB310

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG16g08450	Melon (DHL92) v3.6.1	cpemedB323