Cp4.1LG16g06090 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG16g06090
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptionhistone H4
LocationCp4.1LG16 : 6653529 .. 6653840 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGGACGTGGAAAGGGCGGCAAGGGCTTGGGAAAAGGAGGAGCAAAGCGTCACAGGAAGGTCTTGAGAGATAACATTCAGGGCATCACCAAGCCTGCTATTCGCCGTTTAGCTCGTAGAGGCGGTGTGAAGCGTATCAGTGGATTAATCTATGAAGAAACCAGAGGAGTTTTGAAGATTTTCCTCGAGAATGTGATTCGCGATGCTGTGACCTATACCGAGCACGCTAGGAGGAAGACGGTGACTGCTATGGATGTGGTTTATGCATTGAAGAGGCAGGGAAGGACTTTGTATGGGTTTGGAGGTTAG

mRNA sequence

ATGTCTGGACGTGGAAAGGGCGGCAAGGGCTTGGGAAAAGGAGGAGCAAAGCGTCACAGGAAGGTCTTGAGAGATAACATTCAGGGCATCACCAAGCCTGCTATTCGCCGTTTAGCTCGTAGAGGCGGTGTGAAGCGTATCAGTGGATTAATCTATGAAGAAACCAGAGGAGTTTTGAAGATTTTCCTCGAGAATGTGATTCGCGATGCTGTGACCTATACCGAGCACGCTAGGAGGAAGACGGTGACTGCTATGGATGTGGTTTATGCATTGAAGAGGCAGGGAAGGACTTTGTATGGGTTTGGAGGTTAG

Coding sequence (CDS)

ATGTCTGGACGTGGAAAGGGCGGCAAGGGCTTGGGAAAAGGAGGAGCAAAGCGTCACAGGAAGGTCTTGAGAGATAACATTCAGGGCATCACCAAGCCTGCTATTCGCCGTTTAGCTCGTAGAGGCGGTGTGAAGCGTATCAGTGGATTAATCTATGAAGAAACCAGAGGAGTTTTGAAGATTTTCCTCGAGAATGTGATTCGCGATGCTGTGACCTATACCGAGCACGCTAGGAGGAAGACGGTGACTGCTATGGATGTGGTTTATGCATTGAAGAGGCAGGGAAGGACTTTGTATGGGTTTGGAGGTTAG

Protein sequence

MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Homology
[Close]
BLAST of Cp4.1LG16g06090 vs. Swiss-Prot
Match: H4_EUCGL (Histone H4 OS=Eucalyptus globulus PE=3 SV=3)

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG16g06090 vs. Swiss-Prot
Match: H4_CHEMJ (Histone H4 OS=Chelidonium majus PE=3 SV=3)

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG16g06090 vs. Swiss-Prot
Match: H4_ARATH (Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE=1 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG16g06090 vs. Swiss-Prot
Match: H41_WHEAT (Histone H4 variant TH011 OS=Triticum aestivum PE=3 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG16g06090 vs. Swiss-Prot
Match: H4_PEA (Histone H4 OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG16g06090 vs. TrEMBL
Match: A2WWR4_ORYSI (Histone H4 OS=Oryza sativa subsp. indica GN=OsI_04340 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.0e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG16g06090 vs. TrEMBL
Match: A9NJR8_PICSI (Histone H4 OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.0e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG16g06090 vs. TrEMBL
Match: A9PA83_POPTR (Histone H4 OS=Populus trichocarpa GN=POPTR_0005s11740g PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.0e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG16g06090 vs. TrEMBL
Match: H9MAC8_PINRA (Histone H4 OS=Pinus radiata GN=0_18315_01 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.0e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG16g06090 vs. TrEMBL
Match: B9MST3_SOYBN (Histone H4 OS=Glycine max GN=GLYMA_02G224100 PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.0e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG16g06090 vs. TAIR10
Match: AT1G07660.1 (AT1G07660.1 Histone superfamily protein)

HSP 1 Score: 199.5 bits (506), Expect = 9.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG16g06090 vs. TAIR10
Match: AT1G07820.1 (AT1G07820.1 Histone superfamily protein)

HSP 1 Score: 199.5 bits (506), Expect = 9.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG16g06090 vs. TAIR10
Match: AT2G28740.1 (AT2G28740.1 histone H4)

HSP 1 Score: 199.5 bits (506), Expect = 9.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG16g06090 vs. TAIR10
Match: AT3G45930.1 (AT3G45930.1 Histone superfamily protein)

HSP 1 Score: 199.5 bits (506), Expect = 9.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG16g06090 vs. TAIR10
Match: AT3G53730.1 (AT3G53730.1 Histone superfamily protein)

HSP 1 Score: 199.5 bits (506), Expect = 9.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG16g06090 vs. NCBI nr
Match: gi|976922550|gb|KVI06931.1| (Histone core [Cynara cardunculus var. scolymus])

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 107 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 166

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 167 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 209

[Close]
BLAST of Cp4.1LG16g06090 vs. NCBI nr
Match: gi|641854208|gb|KDO73016.1| (hypothetical protein CISIN_1g047769mg, partial [Citrus sinensis])

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 29  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 88

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 89  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 131

[Close]
BLAST of Cp4.1LG16g06090 vs. NCBI nr
Match: gi|15226944|ref|NP_180441.1| (histone H4 [Arabidopsis thaliana])

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG16g06090 vs. NCBI nr
Match: gi|960491942|ref|XP_014751185.1| (PREDICTED: uncharacterized protein LOC100841093 [Brachypodium distachyon])

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG16g06090 vs. NCBI nr
Match: gi|670426610|ref|XP_008653962.1| (PREDICTED: uncharacterized protein LOC103634138 [Zea mays])

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

The following BLAST results are available for this feature:
BLAST of Cp4.1LG16g06090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
H4_EUCGL1.8e-50100.00Histone H4 OS=Eucalyptus globulus PE=3 SV=3[more]
H4_CHEMJ1.8e-50100.00Histone H4 OS=Chelidonium majus PE=3 SV=3[more]
H4_ARATH1.8e-50100.00Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE=1 SV=2[more]
H41_WHEAT1.8e-50100.00Histone H4 variant TH011 OS=Triticum aestivum PE=3 SV=2[more]
H4_PEA1.8e-50100.00Histone H4 OS=Pisum sativum PE=1 SV=2[more]
BLAST of Cp4.1LG16g06090 vs. TrEMBL
Match NameE-valueIdentityDescription
A2WWR4_ORYSI2.0e-48100.00Histone H4 OS=Oryza sativa subsp. indica GN=OsI_04340 PE=3 SV=1[more]
A9NJR8_PICSI2.0e-48100.00Histone H4 OS=Picea sitchensis PE=2 SV=1[more]
A9PA83_POPTR2.0e-48100.00Histone H4 OS=Populus trichocarpa GN=POPTR_0005s11740g PE=2 SV=1[more]
H9MAC8_PINRA2.0e-48100.00Histone H4 OS=Pinus radiata GN=0_18315_01 PE=3 SV=1[more]
B9MST3_SOYBN2.0e-48100.00Histone H4 OS=Glycine max GN=GLYMA_02G224100 PE=2 SV=1[more]
BLAST of Cp4.1LG16g06090 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G07660.19.9e-52100.00 Histone superfamily protein[more]
AT1G07820.19.9e-52100.00 Histone superfamily protein[more]
AT2G28740.19.9e-52100.00 histone H4[more]
AT3G45930.19.9e-52100.00 Histone superfamily protein[more]
AT3G53730.19.9e-52100.00 Histone superfamily protein[more]
BLAST of Cp4.1LG16g06090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|976922550|gb|KVI06931.1|2.8e-48100.00Histone core [Cynara cardunculus var. scolymus][more]
gi|641854208|gb|KDO73016.1|2.8e-48100.00hypothetical protein CISIN_1g047769mg, partial [Citrus sinensis][more]
gi|15226944|ref|NP_180441.1|2.8e-48100.00histone H4 [Arabidopsis thaliana][more]
gi|960491942|ref|XP_014751185.1|2.8e-48100.00PREDICTED: uncharacterized protein LOC100841093 [Brachypodium distachyon][more]
gi|670426610|ref|XP_008653962.1|2.8e-48100.00PREDICTED: uncharacterized protein LOC103634138 [Zea mays][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006334 nucleosome assembly
cellular_component GO:0009507 chloroplast
cellular_component GO:0005829 cytosol
cellular_component GO:0005730 nucleolus
cellular_component GO:0000786 nucleosome
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009579 thylakoid
cellular_component GO:0005774 vacuolar membrane
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG16g06090.1Cp4.1LG16g06090.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG16g06090Silver-seed gourdcarcpeB1386
Cp4.1LG16g06090Cucumber (Chinese Long) v3cpecucB0331
Cp4.1LG16g06090Cucumber (Chinese Long) v3cpecucB0343
Cp4.1LG16g06090Cucumber (Chinese Long) v3cpecucB0344
Cp4.1LG16g06090Cucumber (Chinese Long) v3cpecucB0347
Cp4.1LG16g06090Cucumber (Chinese Long) v3cpecucB0359
Cp4.1LG16g06090Wax gourdcpewgoB0345
Cp4.1LG16g06090Wax gourdcpewgoB0353
Cp4.1LG16g06090Wax gourdcpewgoB0372
Cp4.1LG16g06090Cucurbita pepo (Zucchini)cpecpeB296
Cp4.1LG16g06090Cucurbita pepo (Zucchini)cpecpeB293
Cp4.1LG16g06090Cucurbita pepo (Zucchini)cpecpeB300
Cp4.1LG16g06090Cucurbita pepo (Zucchini)cpecpeB303
Cp4.1LG16g06090Cucurbita pepo (Zucchini)cpecpeB308
Cp4.1LG16g06090Cucurbita pepo (Zucchini)cpecpeB325
Cp4.1LG16g06090Cucumber (Gy14) v1cgycpeB0096
Cp4.1LG16g06090Cucumber (Gy14) v1cgycpeB0456
Cp4.1LG16g06090Cucumber (Gy14) v1cgycpeB0473
Cp4.1LG16g06090Cucumber (Gy14) v1cgycpeB0483
Cp4.1LG16g06090Cucurbita maxima (Rimu)cmacpeB226
Cp4.1LG16g06090Cucurbita maxima (Rimu)cmacpeB265
Cp4.1LG16g06090Cucurbita maxima (Rimu)cmacpeB470
Cp4.1LG16g06090Cucurbita maxima (Rimu)cmacpeB564
Cp4.1LG16g06090Cucurbita maxima (Rimu)cmacpeB625
Cp4.1LG16g06090Cucurbita maxima (Rimu)cmacpeB662
Cp4.1LG16g06090Cucurbita maxima (Rimu)cmacpeB821
Cp4.1LG16g06090Cucurbita maxima (Rimu)cmacpeB874
Cp4.1LG16g06090Cucurbita moschata (Rifu)cmocpeB229
Cp4.1LG16g06090Cucurbita moschata (Rifu)cmocpeB429
Cp4.1LG16g06090Cucurbita moschata (Rifu)cmocpeB517
Cp4.1LG16g06090Cucurbita moschata (Rifu)cmocpeB574
Cp4.1LG16g06090Cucurbita moschata (Rifu)cmocpeB612
Cp4.1LG16g06090Cucurbita moschata (Rifu)cmocpeB775
Cp4.1LG16g06090Cucurbita moschata (Rifu)cmocpeB812
Cp4.1LG16g06090Wild cucumber (PI 183967)cpecpiB267
Cp4.1LG16g06090Wild cucumber (PI 183967)cpecpiB280
Cp4.1LG16g06090Wild cucumber (PI 183967)cpecpiB281
Cp4.1LG16g06090Wild cucumber (PI 183967)cpecpiB292
Cp4.1LG16g06090Cucumber (Chinese Long) v2cpecuB266
Cp4.1LG16g06090Cucumber (Chinese Long) v2cpecuB276
Cp4.1LG16g06090Cucumber (Chinese Long) v2cpecuB277
Cp4.1LG16g06090Cucumber (Chinese Long) v2cpecuB280
Cp4.1LG16g06090Cucumber (Chinese Long) v2cpecuB290
Cp4.1LG16g06090Bottle gourd (USVL1VR-Ls)cpelsiB219
Cp4.1LG16g06090Bottle gourd (USVL1VR-Ls)cpelsiB235
Cp4.1LG16g06090Bottle gourd (USVL1VR-Ls)cpelsiB240
Cp4.1LG16g06090Bottle gourd (USVL1VR-Ls)cpelsiB241
Cp4.1LG16g06090Watermelon (Charleston Gray)cpewcgB248
Cp4.1LG16g06090Watermelon (Charleston Gray)cpewcgB266
Cp4.1LG16g06090Watermelon (Charleston Gray)cpewcgB278
Cp4.1LG16g06090Watermelon (Charleston Gray)cpewcgB279
Cp4.1LG16g06090Watermelon (97103) v1cpewmB281
Cp4.1LG16g06090Watermelon (97103) v1cpewmB276
Cp4.1LG16g06090Watermelon (97103) v1cpewmB286
Cp4.1LG16g06090Watermelon (97103) v1cpewmB303
Cp4.1LG16g06090Melon (DHL92) v3.5.1cpemeB247
Cp4.1LG16g06090Melon (DHL92) v3.5.1cpemeB269
Cp4.1LG16g06090Melon (DHL92) v3.5.1cpemeB276
Cp4.1LG16g06090Melon (DHL92) v3.5.1cpemeB281
Cp4.1LG16g06090Cucumber (Gy14) v2cgybcpeB035
Cp4.1LG16g06090Cucumber (Gy14) v2cgybcpeB347
Cp4.1LG16g06090Cucumber (Gy14) v2cgybcpeB494
Cp4.1LG16g06090Cucumber (Gy14) v2cgybcpeB620
Cp4.1LG16g06090Cucumber (Gy14) v2cgybcpeB767
Cp4.1LG16g06090Melon (DHL92) v3.6.1cpemedB290
Cp4.1LG16g06090Melon (DHL92) v3.6.1cpemedB292
Cp4.1LG16g06090Melon (DHL92) v3.6.1cpemedB322
Cp4.1LG16g06090Melon (DHL92) v3.6.1cpemedB326
Cp4.1LG16g06090Silver-seed gourdcarcpeB0224
Cp4.1LG16g06090Silver-seed gourdcarcpeB0423
Cp4.1LG16g06090Silver-seed gourdcarcpeB0465
Cp4.1LG16g06090Silver-seed gourdcarcpeB0617