Cp4.1LG16g05360 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAATGGAGAAGGGAGAATGGGATGATGAAATGGAATTAGCGAAGCAGGATGAAAATAGGAAGGGAGCTGAAAGAGAAGACGAGAGAGAGGTACAGAATGACGGGACAGACGGCTTACCCTTTCTCCCTCTTTTTCCCCATTCTCCGATCAACATCCAAAACCCCCCTCCACCTTTTAACTATTTTCGTGCCCAACCGATTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTCTTTTGTTTTTTTTCCCCTTAAATTATATGATTTGCCCTAATTTTTTATTTATTAATCTCCAAATTTAATATTTACTACGCTCATAAATTTTTTAATTTTACTTATTATAGATATTCACAATTTTTATAATTATTTAATTTATTATATATAAATTTAAATTTTATGTCTTAACCCAAAAAAAATCTCAATTTTTTAATTACAAAAAATACTTTATAATAATAAAAAATTTAAGTCAAATTAAATAAAGGTAATGGGTACTTTCCATATACAATTCCATTTTTTTCTTTATTAAAAGAAAAAAAAAAGAAACATTGCCTATTCGAATGATCTGACTAGTCAAAATATGCTACCAATCTCGAGGCATTTTTTAATTTATTAAAAAGAATGGAATCATATTCTTACGTTATATTAATGGTAATCTCGTGTGAGGTCACGTATTAGTAGTAGGGAACCGCGGAACATTTTGTTTAAGGGTGTAGAAACTTCTTTGTGAAGCAGAACAGCATATTTAATGAGCTAAAACAGACAATATATGTTATTGCTGTGGATGGATTGAGAGGAGAGAATATAAAATTACCAAATTTGAAAATTGAATAGACGAAGAATATTTGTTTTTTTTTAATGATTTAATTATCTTGGGAAAGAAAATTATTCAAAAAGTGAGCCGTCTGTGCTGCAGCCAGGCAGGCTCTTCAAATTAGCGCCACTCGAAAGAAGAGGTTGGAGGTGTTCAATCAACAAACGCTTCTGATTCTCTTCTCTCAATCGCTCCCACTGCCTTCTCCTGCTTCGTCGGAGCCGGAGTTGGCGCCTTCTAGGTCTACTGAACGCTCACAACACATGGCTATCGTCGGCGTTCTAGCTTTGCAGGGATCTTTTAACGAGCACATCGCAGGTTCTTCTTCTTCTTCTTCGCCTTCGCTATTGCTAGTTCCTTTTGTAGATGAATATCAATTGTTGTGTTATTGTGGCGCGCAGCTTTGAGAAGGCTCGGAGTGAAGGGCGTAGAGATAAGGAAGCCTGAGCAGCTTCTTAATGTAGCTTCTCTGATTATTCCTGGTGGAGAAAGCACTACCATGGCCAAACTTGCGGATCTCCATAACTTGGTTTGTTCCTCTTTCCTCTACATATTGCATCTATAATTGCACAAATTGAACATAGGAATAGCCTAAAAGTTGAAGCATCTTGCATTCAATCGTGTTTAAGTCGACATCTAATCTTTATTTCTCGATGCTATTGCCCCGCTAAAGCTGTTTTCGCAGATTAGACATCAGATATCTCAAATTGATGGTCTCATTATCATCTGGCTTAGAATTAGAATCGAGTGTATTTATGTTGTCGTAGTTTTGTGTATTTCCAGTTTCCTGCTTTGCGTGAGTTCGTTAGAATGGGGAAGCCCGTGTGGGGCACCTGTGCAGGGCTCATCTTTTTGGCAAACAAGGCTACTGGTGGATTTCCTTCCTCTTTTCCTCACCATTTCAACATCAATGAAATGCTTGAAATGCTTTCTAAACTTGGTATGGATACATGTATTTTCAGGGCAGAAAACTGGTGGACAGGAACTTGTTGGTGGGCTGGATTGTACTGTTCATAGAAACTTCTTTGGAAGTCAGGTAACTCTTGTTGCTTTCTCTTATTCGGTTCTGAAACTAGGAAATTGGCATGGAATGTGTTCAGGAATCAAATTTGCATGAAGTTATCTCTGCCTGTGTGGCACTGTAGCCGACATGAATTTTTCCCTTCAAGTCATCCTACTAGTTGAATCAGCTTCTGATGTTTTTTTTAAATCATAGCATGTTGGAAAAATACAGTCATAAACAACAATCTGGGGAGCTTAGACACTTGCTAATGACCATTACGTGTTAGAAATCACAGATGTCCACAATAGTATGATATTGTTCACTTTGAGCATAAGCTCTTGTAGGCTTTGCTTTTAGTTTCCTCAAAATGCCTCGTACTAATGGAGATGTATTCCTTACTTACAAATCCATGATCATTCCCTTGATTAGTCAACGTAGGATCCCTCCCAACAATCCTCACTAAGCTATTTTAAAATCTACCTTACTACGGGCTCAAATAATGACTTTTCCCCAATGAAAAGTTTCATACTTCATTTAAAATCCTCCATCTCACACGTAGTATGAGATCTTCATTGAAGCATGGAGTTCGGAATGCAGAATCCTTGATGGTTTTGTTTGTACACAAGCTGATCCAAACATAATTATTGAGGTTGATTCCGAATGTTCTGTTTTTCCCCGGATACATGTTATCAGCTTATTGTTGAAGTTCTCGCTTTATATTCACTTGTCCATTTCTTGAGTTCAGAGTTTCCTAATTTAAGAAGAGATCATTATTATGTAGCTTCAAAGCTTTGAGGCAGAGCTGTCGATACCAGAGCTAGTGTCTACTGAAGGTGGTCCGGAAACATTTCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGAAGTGGGATCAGACGTCCAAGTGCTGGCTCATTGCCCTGTCTCTTCAAACTCTAACTTGCATTCAGATTCCTCTGGTGAAGGCAAAGAGGTTTGTTGTATCATCTCTACTCTGCTAGTGCCTCTAATTTGAACACCTAAATGATAGTAATCTGTATATACGAGCCACAAGTTTCAGACGGTACATATGTCGGTTTTGAGTCATAGTTCAGTAGAATTATAATTTTCTGTCACACTAGAGTGTGTTAAGTCGTGTTCCAAATTGGGTTTTAAGAAGAATTAGGCCAAAAATTAGGATACATTTTAAGAAAATAAAACTTCCATCGAAGAAGAGAAGCAAATGAAAGGCTTTCATAAAATTTCTCGTAGAATCGAGAATGAAGTTTTCATTTTGTACATGTTAGATCATGAATTAGTAACTGCATCCAATCTCCAAAAAAAATCCCAATTGTTTCAAACTTTCTCTTTTTCGAATGGAACTTTCTCTTTTCCTCCTACCCGTTCACATTATGGTTTAATGAATATCGCAGGAACAAGGTTCAGAAAGTAAAGTGATTGTAGCAGTGAGGCAAGGGAACCTACTCGCAACAGCCTTCCATCCTGAATTAACATCAGATAACAGATGGTATAGTCTAGTTCTAACTTGAAATACTACACAGCATATTATGATGATCATCTCAAGTGAGTTACAACAATGGACTATGCAGGCACAGTTACTTCCTGAAGATGGCTGGCGATGTTGAAGAATCCTCAACTAGCACAGCAGCAGACATAGTAGATAACGATTCGAGATTCGAAAAACCAAAGATCGACCTTCCGATTTTTCTTTAGCTTAAACCAAATGAACCCCTCCTTCCTCCTCAACCCACACTTACATTTTCAAGTTTCATTCTAGGTTTAATCTATCTATTTTACAATTTGGACCATGTTTTATGTTCCTTACGTTATGTCACAGGATTCTTCTGTTGTATTAATTCGTTTATGACATGTTTTATGTTCCTTATGTCATGTTACAAGAGATGCTGTCTATGGAGATTTGTGTTTTAAGTACTTCAAAATTCCTCCTCTTATAA AGAATGGAGAAGGGAGAATGGGATGATGAAATGGAATTAGCGAAGCAGGATGAAAATAGGAAGGGAGCTGAAAGAGAAGACGAGAGAGAGGCTCTTCAAATTAGCGCCACTCGAAAGAAGAGGTTGGAGGTGTTCAATCAACAAACGCTTCTGATTCTCTTCTCTCAATCGCTCCCACTGCCTTCTCCTGCTTCGTCGGAGCCGGAGTTGGCGCCTTCTAGGTCTACTGAACGCTCACAACACATGGCTATCGTCGGCGTTCTAGCTTTGCAGGGATCTTTTAACGAGCACATCGCAGCTTTGAGAAGGCTCGGAGTGAAGGGCGTAGAGATAAGGAAGCCTGAGCAGCTTCTTAATGTAGCTTCTCTGATTATTCCTGGTGGAGAAAGCACTACCATGGCCAAACTTGCGGATCTCCATAACTTGTTTCCTGCTTTGCGTGAGTTCGTTAGAATGGGGAAGCCCGTGTGGGGCACCTGTGCAGGGCTCATCTTTTTGGCAAACAAGGCTACTGGGCAGAAAACTGGTGGACAGGAACTTGTTGGTGGGCTGGATTGTACTGTTCATAGAAACTTCTTTGGAAGTCAGCTTCAAAGCTTTGAGGCAGAGCTGTCGATACCAGAGCTAGTGTCTACTGAAGGTGGTCCGGAAACATTTCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGAAGTGGGATCAGACGTCCAAGTGCTGGCTCATTGCCCTGTCTCTTCAAACTCTAACTTGCATTCAGATTCCTCTGGTGAAGGCAAAGAGGTTTGTTGTTCAGAAAGTAAAGTGATTGTAGCAGTGAGGCAAGGGAACCTACTCGCAACAGCCTTCCATCCTGAATTAACATCAGATAACAGATGGCACAGTTACTTCCTGAAGATGGCTGGCGATGTTGAAGAATCCTCAACTAGCACAGCAGCAGACATAGTAGATAACGATTCGAGATTCGAAAAACCAAAGATCGACCTTCCGATTTTTCTTTAGCTTAAACCAAATGAACCCCTCCTTCCTCCTCAACCCACACTTACATTTTCAAGTTTCATTCTAGGTTTAATCTATCTATTTTACAATTTGGACCATGTTTTATGTTCCTTACGTTATGTCACAGGATTCTTCTGTTGTATTAATTCGTTTATGACATGTTTTATGTTCCTTATGTCATGTTACAAGAGATGCTGTCTATGGAGATTTGTGTTTTAAGTACTTCAAAATTCCTCCTCTTATAA AGAATGGAGAAGGGAGAATGGGATGATGAAATGGAATTAGCGAAGCAGGATGAAAATAGGAAGGGAGCTGAAAGAGAAGACGAGAGAGAGGCTCTTCAAATTAGCGCCACTCGAAAGAAGAGGTTGGAGGTGTTCAATCAACAAACGCTTCTGATTCTCTTCTCTCAATCGCTCCCACTGCCTTCTCCTGCTTCGTCGGAGCCGGAGTTGGCGCCTTCTAGGTCTACTGAACGCTCACAACACATGGCTATCGTCGGCGTTCTAGCTTTGCAGGGATCTTTTAACGAGCACATCGCAGCTTTGAGAAGGCTCGGAGTGAAGGGCGTAGAGATAAGGAAGCCTGAGCAGCTTCTTAATGTAGCTTCTCTGATTATTCCTGGTGGAGAAAGCACTACCATGGCCAAACTTGCGGATCTCCATAACTTGTTTCCTGCTTTGCGTGAGTTCGTTAGAATGGGGAAGCCCGTGTGGGGCACCTGTGCAGGGCTCATCTTTTTGGCAAACAAGGCTACTGGGCAGAAAACTGGTGGACAGGAACTTGTTGGTGGGCTGGATTGTACTGTTCATAGAAACTTCTTTGGAAGTCAGCTTCAAAGCTTTGAGGCAGAGCTGTCGATACCAGAGCTAGTGTCTACTGAAGGTGGTCCGGAAACATTTCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGAAGTGGGATCAGACGTCCAAGTGCTGGCTCATTGCCCTGTCTCTTCAAACTCTAACTTGCATTCAGATTCCTCTGGTGAAGGCAAAGAGGTTTGTTGTTCAGAAAGTAAAGTGATTGTAGCAGTGAGGCAAGGGAACCTACTCGCAACAGCCTTCCATCCTGAATTAACATCAGATAACAGATGGCACAGTTACTTCCTGAAGATGGCTGGCGATGTTGAAGAATCCTCAACTAGCACAGCAGCAGACATAGTAGATAACGATTCGAGATTCGAAAAACCAAAGATCGACCTTCCGATTTTTCTTTAG RMEKGEWDDEMELAKQDENRKGAEREDEREALQISATRKKRLEVFNQQTLLILFSQSLPLPSPASSEPELAPSRSTERSQHMAIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLADLHNLFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQELVGGLDCTVHRNFFGSQLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILEVGSDVQVLAHCPVSSNSNLHSDSSGEGKEVCCSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSTSTAADIVDNDSRFEKPKIDLPIFL
BLAST of Cp4.1LG16g05360 vs. Swiss-Prot
Match: PDX2_ARATH (Probable pyridoxal 5'-phosphate synthase subunit PDX2 OS=Arabidopsis thaliana GN=PDX2 PE=1 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 9.6e-98 Identity = 180/252 (71.43%), Postives = 211/252 (83.73%), Query Frame = 1
BLAST of Cp4.1LG16g05360 vs. Swiss-Prot
Match: PDXT_DEHM1 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195) GN=pdxT PE=3 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 2.7e-44 Identity = 103/218 (47.25%), Postives = 133/218 (61.01%), Query Frame = 1
BLAST of Cp4.1LG16g05360 vs. Swiss-Prot
Match: PDXT_PELTS (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=pdxT PE=3 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 3.9e-43 Identity = 102/214 (47.66%), Postives = 127/214 (59.35%), Query Frame = 1
BLAST of Cp4.1LG16g05360 vs. Swiss-Prot
Match: PDXT_CHLSY (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=pdxT PE=3 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 3.9e-43 Identity = 95/215 (44.19%), Postives = 125/215 (58.14%), Query Frame = 1
BLAST of Cp4.1LG16g05360 vs. Swiss-Prot
Match: PDXT_CHLAA (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=pdxT PE=3 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 3.9e-43 Identity = 95/215 (44.19%), Postives = 125/215 (58.14%), Query Frame = 1
BLAST of Cp4.1LG16g05360 vs. TrEMBL
Match: A0A0A0KAR5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G139790 PE=3 SV=1) HSP 1 Score: 441.4 bits (1134), Expect = 9.6e-121 Identity = 225/251 (89.64%), Postives = 236/251 (94.02%), Query Frame = 1
BLAST of Cp4.1LG16g05360 vs. TrEMBL
Match: W9RH61_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007670 PE=3 SV=1) HSP 1 Score: 382.1 bits (980), Expect = 6.9e-103 Identity = 194/251 (77.29%), Postives = 215/251 (85.66%), Query Frame = 1
BLAST of Cp4.1LG16g05360 vs. TrEMBL
Match: A0A0R0L9H9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G116100 PE=3 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 5.8e-102 Identity = 194/252 (76.98%), Postives = 219/252 (86.90%), Query Frame = 1
BLAST of Cp4.1LG16g05360 vs. TrEMBL
Match: A0A0R0LGB9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G116100 PE=3 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 2.2e-101 Identity = 194/257 (75.49%), Postives = 219/257 (85.21%), Query Frame = 1
BLAST of Cp4.1LG16g05360 vs. TrEMBL
Match: A0A0S3SWR8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G079100 PE=3 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 4.9e-101 Identity = 193/252 (76.59%), Postives = 213/252 (84.52%), Query Frame = 1
BLAST of Cp4.1LG16g05360 vs. TAIR10
Match: AT5G60540.1 (AT5G60540.1 pyridoxine biosynthesis 2) HSP 1 Score: 358.2 bits (918), Expect = 5.4e-99 Identity = 180/252 (71.43%), Postives = 211/252 (83.73%), Query Frame = 1
BLAST of Cp4.1LG16g05360 vs. NCBI nr
Match: gi|659127875|ref|XP_008463934.1| (PREDICTED: pyridoxal biosynthesis protein PDX2 [Cucumis melo]) HSP 1 Score: 442.2 bits (1136), Expect = 8.0e-121 Identity = 224/251 (89.24%), Postives = 237/251 (94.42%), Query Frame = 1
BLAST of Cp4.1LG16g05360 vs. NCBI nr
Match: gi|449455996|ref|XP_004145736.1| (PREDICTED: probable pyridoxal 5'-phosphate synthase subunit PDX2 [Cucumis sativus]) HSP 1 Score: 441.4 bits (1134), Expect = 1.4e-120 Identity = 225/251 (89.64%), Postives = 236/251 (94.02%), Query Frame = 1
BLAST of Cp4.1LG16g05360 vs. NCBI nr
Match: gi|703105285|ref|XP_010098208.1| (hypothetical protein L484_007670 [Morus notabilis]) HSP 1 Score: 382.1 bits (980), Expect = 9.9e-103 Identity = 194/251 (77.29%), Postives = 215/251 (85.66%), Query Frame = 1
BLAST of Cp4.1LG16g05360 vs. NCBI nr
Match: gi|955302757|ref|XP_014630138.1| (PREDICTED: probable pyridoxal 5'-phosphate synthase subunit PDX2 isoform X2 [Glycine max]) HSP 1 Score: 379.0 bits (972), Expect = 8.4e-102 Identity = 194/252 (76.98%), Postives = 219/252 (86.90%), Query Frame = 1
BLAST of Cp4.1LG16g05360 vs. NCBI nr
Match: gi|694413624|ref|XP_009335066.1| (PREDICTED: pyridoxal biosynthesis protein PDX2-like isoform X1 [Pyrus x bretschneideri]) HSP 1 Score: 378.6 bits (971), Expect = 1.1e-101 Identity = 194/251 (77.29%), Postives = 218/251 (86.85%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |