Cp4.1LG16g04260 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCAGAAGACAAAATAGTAGTTGGGAAGATCCTCTCATCCAGAGCAGCAGCGGATGAATCCATTTATTTATACAAATTAGTCCAAAATCTGACGGAAAAATATTACAAATCTCCGAATCCAACCTTCTTCCCCAATCGGAATCGTATCCTCCCTCCATCGTTGAAGCTTCCGGCGAGCGAACAGAGAGGTAAGTGTTGAGCATTTGTGCTAATGGACGAGGTGATGACGGTTGGGGATGCGTTCTCGTCGTCCGTTAAACCGTCGTTGTTTCCATTGGCACCGGATCCTTTGCTCACTTCCAATCTCCCTCTTATCTCCGCCTTCCTCGCTGGCGCCATCGCCCAGTTTCTCAAGATCTTTACCACCTGGTACACTTTCTCTGCTTTGCTGATTTTTTGTATTGCGAGTTTTGTGTACATTTCTCCACGATCTGAGGGAGCCAGAGGTTAATCTGTTGTGTTCTGGTTTTTGGACTCTTAGGTATAAGGAAAGAAAATGGGAATCGAAACGGATGTTTGGTTCTGGCGGAATGCCTTCATCTCACTCTGCAACTGTGACTGCTTTGGCCCTTGCTATTGCCCTGCAGGAAGGATCCGGAGGACCTGCTTTTGCCGTCGCCGTAGTCTTTGCATGTGTTGTATGTGCTTGATTCCTTCTTTCTTCTTGTTTACATGCTTGTGTTCTTTCGTTTACTTTCCTCTTCTGATGCCCTGATTACTGAAAGAATTTAGAAAATTTTGGCTTTCTGTTCCATTAGCTGTAATGCTTGTTTTGATTTACAGTTTAGGATGAATTATAATTTATAAGTATAGTTCTTGAATATTTAGTTTCATTGTACCTTAAATAGTTTCTAACAAGTTCTTAAAGCTTTCATGGTTGTATCTATTAAGGTCATCTACTTTATAACTTTTCTAGCAAGTCTTAAAATGGTTCATTTGTATCTGATGAGTTTCTATTGTTTGCTTCATTAGTCGAAACATTTGCGAGGCATAAAGGTGATAAATATTAGGATCACAATTTATGCCAAAAATGAATTACTATCAGGTTAAGGTCTTATTCGACACAAAAATGAAAGTAAGAAACTTGTTTGAAAAGTTTAGAGAATGGATAGACACATCTATAAAAATTCAGATACCTCGAGCAAAGGTGGAATTTACTAGAACAAGATTATGCTAGACTAAATTTGTATTTGATGACATGATCTGTTTTGTTTGGTTTCAATGGTATTCGGTATATGTACTTCATGATCAAATTTTTTTAGTTAAATCTTGTTTTTGTGATCAAATTTGTTTAGTTAAATCTTGTTGTTTTGATCACATGTCTGTTGCTTTTGTATTCTGAAATGGTAACTTGGCTGCTTTTGTATTGACTCTGCCTTCTTCCCGTCGTCTACCTTGTATTTTCATTACATTTCCGTCGTGTTCCAATCCTGTAATGATAACTCGGCTGTTCTTGTAAAGACTTTGCCTCCTTGGCGTTGTCTTGTCCTGTCTCTTTGTTTCTGCTTCTTCTGCAGACCAGATGAGTATTAACAATATCATTCTATCAGTTCCAAATCAGCTAAAAATCTCAGTGAATGTGTTTGACAATTGCAATTCCAGTGATAGTAATGGACTTTACTCCATATCTCCTTTTGAATGTTTTTGTTTCTAATTAAAATTTGATTTTCGTTGTTACTATTTTTCTATATGATCGATTGACTTTAAGCTTCGGGTTTTTCGAACTCTTTTTAATGTTTTCATGTAATTGGCCTTCATGTATTTTCAATTTCTTGAAGGTAATGTATGATGCTTCTGGAGTCAGACTTCATGCTGGTCTTCAAGCCGAGGTAAGCTCTTTAGAAAGTGTATAGGTTCCATTTTTTTTATCTTTCATTTATCATTACCACTTCCATCTATGTCACCTTGAGTCTGATTATTATGTCCATTGTACAAAACTGTTCATCTTTTCCCATTAAGTCTTATCATTTGATGATCATTGCAGTTGCTGAACCAAATAGTTTGCGAGTTTCCTCCTGAACATCCTCTGTCCAGTATTAGACCATTGCGAGATTCACTTGGACACACTCCACTTCAGGTCAGTGCATTTGCTTCATATATGTATGTTGGGATATGGAACCATATGATATTAAAAGCTTAGCCTTGCAAATTTGTATCCTTCATATATTCTGGAGTAAAAAAAGAAAAGAAAAAACAAAAAAACTCCGAACTCTTTTGCTATGATGGAATACTATACCAAAGTTTGTCAATTTGAACCTAATTCAATGGATATGGTATCAACTAATATCCCAATGGTCGATGGTTCAATCTCTTACTCTACAATTCTTTGAAATTAAAAAAAAATTAAAAAAAATAGTGTAGAACTTCGAAGGCAAACTACAAAATGCCACTTTTTGCTATGGCTTATATGCTAATTATTTGAATACTATCAGATGCAATAATCATTTGCATTGTGTTTTTCCAAGCTAAGTATTGTAATGCTGCTGCTGACCGTTAATTAACTTAATATCATCCAACTGTGGATTGGGACATGGATATTATGTCTTGTTAGCCTTGTTTTATTATTATCTAAAATGACCCATTTTGAAGCACTAATATTGTTTATTATCTTCATAATGATGCATTGTTCTAGTCAACTTCATCCAGATAGAAAGAATTTTGTTAATTCATATTCACTCTCTGGTATCGATAACAGGTTGTTGCAGGTGCTGTGCTGGGATGTCTAGTGGCTTATTTTACAAGAAATCAAAACTAGATTATGGAATTTGAACATCGGGATCAAGTATGGCTTTTCATTCATTGGAACCACTTGAACAAGTGTAAAGAAAAAAATGGTTGCTGTTTAGGCATTGGACTGGGTGATTGTTCTTCCATAATTGGGACTCCAATGAATGCAGAAATGATATATTCTTTGGTTCAGATCTCGCTATTACAAATCGCCTCCCAATCCATCGAGATTGAATTTCTTGTTTAGACTTGTCATATATATATATACACACACCTCAAAGGATTAAATGTTAATTCTTGATCGGTTTTTCTCCTTTTACAAGTTTCTTAGTGTTCATATACTCGACACCGACCATACAAGACTTCTAGAAACTAAATGAAGAACAGTTGATA TTCAGAAGACAAAATAGTAGTTGGGAAGATCCTCTCATCCAGAGCAGCAGCGGATGAATCCATTTATTTATACAAATTAGTCCAAAATCTGACGGAAAAATATTACAAATCTCCGAATCCAACCTTCTTCCCCAATCGGAATCGTATCCTCCCTCCATCGTTGAAGCTTCCGGCGAGCGAACAGAGAGGTAAGTGTTGAGCATTTGTGCTAATGGACGAGGTGATGACGGTTGGGGATGCGTTCTCGTCGTCCGTTAAACCGTCGTTGTTTCCATTGGCACCGGATCCTTTGCTCACTTCCAATCTCCCTCTTATCTCCGCCTTCCTCGCTGGCGCCATCGCCCAGTTTCTCAAGATCTTTACCACCTGGTATAAGGAAAGAAAATGGGAATCGAAACGGATGTTTGGTTCTGGCGGAATGCCTTCATCTCACTCTGCAACTGTGACTGCTTTGGCCCTTGCTATTGCCCTGCAGGAAGGATCCGGAGGACCTGCTTTTGCCGTCGCCGTAGTCTTTGCATGTGTTGTAATGTATGATGCTTCTGGAGTCAGACTTCATGCTGGTCTTCAAGCCGAGTTGCTGAACCAAATAGTTTGCGAGTTTCCTCCTGAACATCCTCTGTCCAGTATTAGACCATTGCGAGATTCACTTGGACACACTCCACTTCAGGTTGTTGCAGGTGCTGTGCTGGGATGTCTAGTGGCTTATTTTACAAGAAATCAAAACTAGATTATGGAATTTGAACATCGGGATCAAGTATGGCTTTTCATTCATTGGAACCACTTGAACAAGTGTAAAGAAAAAAATGGTTGCTGTTTAGGCATTGGACTGGGTGATTGTTCTTCCATAATTGGGACTCCAATGAATGCAGAAATGATATATTCTTTGGTTCAGATCTCGCTATTACAAATCGCCTCCCAATCCATCGAGATTGAATTTCTTGTTTAGACTTGTCATATATATATATACACACACCTCAAAGGATTAAATGTTAATTCTTGATCGGTTTTTCTCCTTTTACAAGTTTCTTAGTGTTCATATACTCGACACCGACCATACAAGACTTCTAGAAACTAAATGAAGAACAGTTGATA ATGGACGAGGTGATGACGGTTGGGGATGCGTTCTCGTCGTCCGTTAAACCGTCGTTGTTTCCATTGGCACCGGATCCTTTGCTCACTTCCAATCTCCCTCTTATCTCCGCCTTCCTCGCTGGCGCCATCGCCCAGTTTCTCAAGATCTTTACCACCTGGTATAAGGAAAGAAAATGGGAATCGAAACGGATGTTTGGTTCTGGCGGAATGCCTTCATCTCACTCTGCAACTGTGACTGCTTTGGCCCTTGCTATTGCCCTGCAGGAAGGATCCGGAGGACCTGCTTTTGCCGTCGCCGTAGTCTTTGCATGTGTTGTAATGTATGATGCTTCTGGAGTCAGACTTCATGCTGGTCTTCAAGCCGAGTTGCTGAACCAAATAGTTTGCGAGTTTCCTCCTGAACATCCTCTGTCCAGTATTAGACCATTGCGAGATTCACTTGGACACACTCCACTTCAGGTTGTTGCAGGTGCTGTGCTGGGATGTCTAGTGGCTTATTTTACAAGAAATCAAAACTAG MDEVMTVGDAFSSSVKPSLFPLAPDPLLTSNLPLISAFLAGAIAQFLKIFTTWYKERKWESKRMFGSGGMPSSHSATVTALALAIALQEGSGGPAFAVAVVFACVVMYDASGVRLHAGLQAELLNQIVCEFPPEHPLSSIRPLRDSLGHTPLQVVAGAVLGCLVAYFTRNQN
BLAST of Cp4.1LG16g04260 vs. Swiss-Prot
Match: YUID_BACSU (Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) GN=yuiD PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.1e-20 Identity = 59/154 (38.31%), Postives = 88/154 (57.14%), Query Frame = 1
BLAST of Cp4.1LG16g04260 vs. TrEMBL
Match: A0A0A0LT60_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G416120 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 4.9e-68 Identity = 138/172 (80.23%), Postives = 148/172 (86.05%), Query Frame = 1
BLAST of Cp4.1LG16g04260 vs. TrEMBL
Match: V4W4B4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016908mg PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 9.5e-64 Identity = 127/177 (71.75%), Postives = 145/177 (81.92%), Query Frame = 1
BLAST of Cp4.1LG16g04260 vs. TrEMBL
Match: A0A067DL47_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030450mg PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 9.5e-64 Identity = 127/177 (71.75%), Postives = 145/177 (81.92%), Query Frame = 1
BLAST of Cp4.1LG16g04260 vs. TrEMBL
Match: A0A061DLI3_THECC (Acid phosphatase/vanadium-dependent haloperoxidase-related protein OS=Theobroma cacao GN=TCM_002124 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 1.2e-63 Identity = 128/172 (74.42%), Postives = 147/172 (85.47%), Query Frame = 1
BLAST of Cp4.1LG16g04260 vs. TrEMBL
Match: B9STL9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1016770 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 2.1e-63 Identity = 128/171 (74.85%), Postives = 143/171 (83.63%), Query Frame = 1
BLAST of Cp4.1LG16g04260 vs. TAIR10
Match: AT3G21610.1 (AT3G21610.1 Acid phosphatase/vanadium-dependent haloperoxidase-related protein) HSP 1 Score: 238.0 bits (606), Expect = 4.2e-63 Identity = 119/174 (68.39%), Postives = 139/174 (79.89%), Query Frame = 1
BLAST of Cp4.1LG16g04260 vs. TAIR10
Match: AT1G67600.1 (AT1G67600.1 Acid phosphatase/vanadium-dependent haloperoxidase-related protein) HSP 1 Score: 190.3 bits (482), Expect = 1.0e-48 Identity = 94/136 (69.12%), Postives = 110/136 (80.88%), Query Frame = 1
BLAST of Cp4.1LG16g04260 vs. TAIR10
Match: AT1G24350.3 (AT1G24350.3 Acid phosphatase/vanadium-dependent haloperoxidase-related protein) HSP 1 Score: 177.6 bits (449), Expect = 6.8e-45 Identity = 86/126 (68.25%), Postives = 105/126 (83.33%), Query Frame = 1
BLAST of Cp4.1LG16g04260 vs. TAIR10
Match: AT3G61770.1 (AT3G61770.1 Acid phosphatase/vanadium-dependent haloperoxidase-related protein) HSP 1 Score: 121.7 bits (304), Expect = 4.4e-28 Identity = 65/140 (46.43%), Postives = 93/140 (66.43%), Query Frame = 1
BLAST of Cp4.1LG16g04260 vs. TAIR10
Match: AT3G12685.1 (AT3G12685.1 Acid phosphatase/vanadium-dependent haloperoxidase-related protein) HSP 1 Score: 80.9 bits (198), Expect = 8.6e-16 Identity = 53/153 (34.64%), Postives = 80/153 (52.29%), Query Frame = 1
BLAST of Cp4.1LG16g04260 vs. NCBI nr
Match: gi|449468382|ref|XP_004151900.1| (PREDICTED: uncharacterized protein LOC101219445 [Cucumis sativus]) HSP 1 Score: 289.3 bits (739), Expect = 4.5e-75 Identity = 145/172 (84.30%), Postives = 156/172 (90.70%), Query Frame = 1
BLAST of Cp4.1LG16g04260 vs. NCBI nr
Match: gi|659111814|ref|XP_008455920.1| (PREDICTED: uncharacterized protein LOC103495990 isoform X1 [Cucumis melo]) HSP 1 Score: 288.9 bits (738), Expect = 5.9e-75 Identity = 145/172 (84.30%), Postives = 156/172 (90.70%), Query Frame = 1
BLAST of Cp4.1LG16g04260 vs. NCBI nr
Match: gi|700208102|gb|KGN63221.1| (hypothetical protein Csa_2G416120 [Cucumis sativus]) HSP 1 Score: 265.4 bits (677), Expect = 7.0e-68 Identity = 138/172 (80.23%), Postives = 148/172 (86.05%), Query Frame = 1
BLAST of Cp4.1LG16g04260 vs. NCBI nr
Match: gi|659111816|ref|XP_008455921.1| (PREDICTED: uncharacterized protein LOC103495990 isoform X2 [Cucumis melo]) HSP 1 Score: 260.0 bits (663), Expect = 2.9e-66 Identity = 132/154 (85.71%), Postives = 140/154 (90.91%), Query Frame = 1
BLAST of Cp4.1LG16g04260 vs. NCBI nr
Match: gi|1009111144|ref|XP_015899469.1| (PREDICTED: uncharacterized membrane protein YuiD-like [Ziziphus jujuba]) HSP 1 Score: 253.4 bits (646), Expect = 2.7e-64 Identity = 127/172 (73.84%), Postives = 145/172 (84.30%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |