Cp4.1LG16g03050 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCTGACACTTCTGTCAGATTTCTACCCCTTCATCTGTCATCTTCAACCTTCTCTTAAATTCACTTCCAATTGGCCCATCCTCTAATTCTCTCACCTCCATGGATTCTCTCTCCAAGCTCCACCTCTGTTTCCTCGCTGCAGCTCTCCTCTCCGCCACTGCCCATGGCTACGCCGTCGTCACCGGCACCGTCTTTTGCGATCAGTGCAAAGATGGTCAAATTTCCATGTTTGATTACCCGATTAACGGTATGATTAAATTTATCGTAACCCATTAATTTAATATTAAATTTATCGTAACCCGTTAACTTAATTTGGTCGTTGCAGGTGTTAAAGTGATGGTGGCTTGTGGCAATGGCAATGGGGGAGTGACGTATTTGAGGGAGGAGACTACGAATTTGTTTGGAAGCTTTACGATGAGATTTGATGGAATGCCGGATCTTAGCGGCTGTTATGCGACGGTTGGTGGAATTGGAGAGGGAGCAACGACGGACTGCGGCGGCGCTGGTAGCCCGCCGAGGAGTCTTAGGTTAATGTTTAGATTGTTTAGTATGGAAATGTATGTGGTTGATTCGTTGCTGTCTCAACCGGCTCAACCAATGTCGTTCTGTTCCGCTTCGGTTCATCCCGTCCCGGTCCCGGCCCCGGTTGTTATGCCACCACCGCCGAATGTGCCTCCTCCGTTCAAGATGCCTCCGCTTCCTCAATTGCCGCCAATTCCGCCACTTCCTCAGTTGCCACCGATGCCATTCTTGGAAGCATCTGCTTGTCAACATGAGTAAGTGACGTGTTCAGAATTATTGAGAGGGAGTTCTACGTTGACTAATTTAGGGGAGGATCATAATATATCTCTATTGACACGTATTTATTTATTTATAGAAATTGGACGAATCCAGATTACAAATGTTATTGGAGAGCGGTGAACCCGGACATGAAAGTGGGCGTTGTGTTTGGAGTACTAGCGGCGAACCGGTACGGGACGGACCTGACCCTATGGAACGGGCTACAGGGGAGAGGGGACCCTTATAGGACCCTTCTACGAGAAGCCATAACGGCGTTCCTCAATTCCTACAATTCCGTTCATTTCCCCTACCCGACACTGTCTGTAGTGGAAGGCTTAAATTGGGCCTTATTGGGCTCTCAACGGGCCGTCCTCCACACGGCCCTTCGTTTCAAACGGGCCAACTCGGGTAATAGCCACGTCACCTGCAAATTCGATCCTTGCCAATAA TCTGACACTTCTGTCAGATTTCTACCCCTTCATCTGTCATCTTCAACCTTCTCTTAAATTCACTTCCAATTGGCCCATCCTCTAATTCTCTCACCTCCATGGATTCTCTCTCCAAGCTCCACCTCTGTTTCCTCGCTGCAGCTCTCCTCTCCGCCACTGCCCATGGCTACGCCGTCGTCACCGGCACCGTCTTTTGCGATCAGTGCAAAGATGGTCAAATTTCCATGTTTGATTACCCGATTAACGGTGTTAAAGTGATGGTGGCTTGTGGCAATGGCAATGGGGGAGTGACGTATTTGAGGGAGGAGACTACGAATTTGTTTGGAAGCTTTACGATGAGATTTGATGGAATGCCGGATCTTAGCGGCTGTTATGCGACGGTTGGTGGAATTGGAGAGGGAGCAACGACGGACTGCGGCGGCGCTGGTAGCCCGCCGAGGAGTCTTAGGTTAATGTTTAGATTGTTTAGTATGGAAATGTATGTGGTTGATTCGTTGCTGTCTCAACCGGCTCAACCAATGTCGTTCTGTTCCGCTTCGGTTCATCCCGTCCCGGTCCCGGCCCCGGTTGTTATGCCACCACCGCCGAATGTGCCTCCTCCGTTCAAGATGCCTCCGCTTCCTCAATTGCCGCCAATTCCGCCACTTCCTCAAGCGGTGAACCCGGACATGAAAGTGGGCGTTGTGTTTGGAGTACTAGCGGCGAACCGGTACGGGACGGACCTGACCCTATGGAACGGGCTACAGGGGAGAGGGGACCCTTATAGGACCCTTCTACGAGAAGCCATAACGGCGTTCCTCAATTCCTACAATTCCGTTCATTTCCCCTACCCGACACTGTCTGTAGTGGAAGGCTTAAATTGGGCCTTATTGGGCTCTCAACGGGCCGTCCTCCACACGGCCCTTCGTTTCAAACGGGCCAACTCGGGTAATAGCCACGTCACCTGCAAATTCGATCCTTGCCAATAA ATGGATTCTCTCTCCAAGCTCCACCTCTGTTTCCTCGCTGCAGCTCTCCTCTCCGCCACTGCCCATGGCTACGCCGTCGTCACCGGCACCGTCTTTTGCGATCAGTGCAAAGATGGTCAAATTTCCATGTTTGATTACCCGATTAACGGTGTTAAAGTGATGGTGGCTTGTGGCAATGGCAATGGGGGAGTGACGTATTTGAGGGAGGAGACTACGAATTTGTTTGGAAGCTTTACGATGAGATTTGATGGAATGCCGGATCTTAGCGGCTGTTATGCGACGGTTGGTGGAATTGGAGAGGGAGCAACGACGGACTGCGGCGGCGCTGGTAGCCCGCCGAGGAGTCTTAGGTTAATGTTTAGATTGTTTAGTATGGAAATGTATGTGGTTGATTCGTTGCTGTCTCAACCGGCTCAACCAATGTCGTTCTGTTCCGCTTCGGTTCATCCCGTCCCGGTCCCGGCCCCGGTTGTTATGCCACCACCGCCGAATGTGCCTCCTCCGTTCAAGATGCCTCCGCTTCCTCAATTGCCGCCAATTCCGCCACTTCCTCAAGCGGTGAACCCGGACATGAAAGTGGGCGTTGTGTTTGGAGTACTAGCGGCGAACCGGTACGGGACGGACCTGACCCTATGGAACGGGCTACAGGGGAGAGGGGACCCTTATAGGACCCTTCTACGAGAAGCCATAACGGCGTTCCTCAATTCCTACAATTCCGTTCATTTCCCCTACCCGACACTGTCTGTAGTGGAAGGCTTAAATTGGGCCTTATTGGGCTCTCAACGGGCCGTCCTCCACACGGCCCTTCGTTTCAAACGGGCCAACTCGGGTAATAGCCACGTCACCTGCAAATTCGATCCTTGCCAATAA MDSLSKLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPINGVKVMVACGNGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYATVGGIGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQPMSFCSASVHPVPVPAPVVMPPPPNVPPPFKMPPLPQLPPIPPLPQAVNPDMKVGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPTLSVVEGLNWALLGSQRAVLHTALRFKRANSGNSHVTCKFDPCQ
BLAST of Cp4.1LG16g03050 vs. TrEMBL
Match: A0A067JUD3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19581 PE=4 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 7.3e-93 Identity = 183/313 (58.47%), Postives = 217/313 (69.33%), Query Frame = 1
BLAST of Cp4.1LG16g03050 vs. TrEMBL
Match: A0A0A0LJ27_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G264000 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 9.6e-93 Identity = 194/321 (60.44%), Postives = 229/321 (71.34%), Query Frame = 1
BLAST of Cp4.1LG16g03050 vs. TrEMBL
Match: B9SQJ5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0738830 PE=4 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 1.1e-91 Identity = 184/314 (58.60%), Postives = 219/314 (69.75%), Query Frame = 1
BLAST of Cp4.1LG16g03050 vs. TrEMBL
Match: D7U593_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g01960 PE=4 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 4.0e-91 Identity = 182/310 (58.71%), Postives = 220/310 (70.97%), Query Frame = 1
BLAST of Cp4.1LG16g03050 vs. TrEMBL
Match: A0A0B2QFE6_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_014583 PE=4 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 4.5e-90 Identity = 182/322 (56.52%), Postives = 216/322 (67.08%), Query Frame = 1
BLAST of Cp4.1LG16g03050 vs. TAIR10
Match: AT2G16630.1 (AT2G16630.1 Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 153.3 bits (386), Expect = 2.3e-37 Identity = 90/193 (46.63%), Postives = 117/193 (60.62%), Query Frame = 1
BLAST of Cp4.1LG16g03050 vs. NCBI nr
Match: gi|659115637|ref|XP_008457656.1| (PREDICTED: uncharacterized protein LOC103497304 [Cucumis melo]) HSP 1 Score: 381.3 bits (978), Expect = 1.5e-102 Identity = 199/322 (61.80%), Postives = 234/322 (72.67%), Query Frame = 1
BLAST of Cp4.1LG16g03050 vs. NCBI nr
Match: gi|643715635|gb|KDP27576.1| (hypothetical protein JCGZ_19581 [Jatropha curcas]) HSP 1 Score: 348.6 bits (893), Expect = 1.1e-92 Identity = 183/313 (58.47%), Postives = 217/313 (69.33%), Query Frame = 1
BLAST of Cp4.1LG16g03050 vs. NCBI nr
Match: gi|802707714|ref|XP_012084370.1| (PREDICTED: protodermal factor 1 [Jatropha curcas]) HSP 1 Score: 348.6 bits (893), Expect = 1.1e-92 Identity = 183/313 (58.47%), Postives = 217/313 (69.33%), Query Frame = 1
BLAST of Cp4.1LG16g03050 vs. NCBI nr
Match: gi|700206786|gb|KGN61905.1| (hypothetical protein Csa_2G264000 [Cucumis sativus]) HSP 1 Score: 348.2 bits (892), Expect = 1.4e-92 Identity = 194/321 (60.44%), Postives = 229/321 (71.34%), Query Frame = 1
BLAST of Cp4.1LG16g03050 vs. NCBI nr
Match: gi|255574712|ref|XP_002528264.1| (PREDICTED: protodermal factor 1 [Ricinus communis]) HSP 1 Score: 344.7 bits (883), Expect = 1.5e-91 Identity = 184/314 (58.60%), Postives = 219/314 (69.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |