Cp4.1LG16g01270 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG16g01270
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Unknown protein
Location	Cp4.1LG16 : 2926825 .. 2928317 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGATTAAAAAGAAAAATTGAAATTGAGGTAGAGAAGAAGACATCATGGGAAGAAGCTGCCATGGAGATGAAACATGGGAAGAACAGAACCAAATCCAAGAACAAGAAGACGAAGAAGCTTTATCTTTCTGTGACCTTCCTCTAAAAGAAACGCAGCCGCCTTTGAATCTAAATCAAACCCCGATCAGATCCTCCGCCGCCGTCCAAACAGAGGACTTTGATTTCAACCACTGCCCTCCGCCACTGCCGCAGCCCATGTGCGCCGCCGATGAGGTCTTCTTCCAAGGCCAAATCCTCCCTCTTCGTCACTCTTTCAGCTCTGAAAATTCCCACAATAACCCCTTCTTTCCTAGAAATTCCTCCACCAGGTCCAAATTTTATACATTATAATTTTTTTTTTATTTTTTTTTTATAATTTCAGCCTATTTTTATTATAACCTAAGATTCTTTCCTCCCTGTCTTGTTCTTGCTTCTCTCCCGACAGGTCGGAGTCTTCGGATATATTAAGGTTTAGAAATGGAAGCACCAGCAGCAGTAGCAGTAGAAGCCATTATTCCCGGTAAACCTTTTCAATTTTTAGTCGGAGTTCAAACAAAACATTTTTTTTATAAGAGTATAAGAAAAATGTAAATAAACAAATTAAATTTTTATTTTTTCACAATTTTTAATAAATCGGCAATTCTTAATCCTAACATTACTATGTTGTGTTATTTATATTTGAATGATATAAAATATTTTTCAAATTTCAGATCATCGAGTATTAGTAATAATTCCATTTCAATTCCGACGAATTCCAAGCCAAGACCACACAACAACGTTTTCCACTCTCACCCTAGTCCGACGCCCCAAATCAGATCCCATTCAACTTCCGGCCGCCGAAGCCGGAGTTCATCCCGGTGGGACTTTTTCCGGCTGGGTCTTCTCCGAACGCCGGGAATGGAACTTCACGACCTCAAAACTCGCACCAACTCCGCCTCGGCCGCAGCCACCCCGGCGGCGCATACAACAGCTGGCTCGTTTCTGGGTGTGGTGAGCTGCAAAAAATCAGTGGATACAGTAGCGGCGGCGGGGAAGAAGAAAAGGAGTGAAAATGGAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAGGGAAACGAGGGTGTCACATCGTCGAACATTTGAATGGGTAAAGCAGCTCTCGCATGCAAGCTCTGGTGACGAACAATAATCATTCATTCCCCACTTTCCTTTTCAATTTCACTTTTCTAACTTTGTTGTTTTCATTCATTTTTTACTTACAAGTCAAGAAGATATCTCCATCAAAGATTATTTATGTAAAGAGTTCATGGTGTTGTTTAACAAATGCATACATCAATGATGAATTGAATGATGTTATGATGGTTTATGATGAGGGAAATAGCTATGAATGGGATTGTTATGAAGGGTTTGGTGGGTTTTGTTTGAAAGAGAATTTTAGTGGTGAGAGGCAAGAGGATTATGGGGATACCAAAAAGA

mRNA sequence

TAGATTAAAAAGAAAAATTGAAATTGAGGTAGAGAAGAAGACATCATGGGAAGAAGCTGCCATGGAGATGAAACATGGGAAGAACAGAACCAAATCCAAGAACAAGAAGACGAAGAAGCTTTATCTTTCTGTGACCTTCCTCTAAAAGAAACGCAGCCGCCTTTGAATCTAAATCAAACCCCGATCAGATCCTCCGCCGCCGTCCAAACAGAGGACTTTGATTTCAACCACTGCCCTCCGCCACTGCCGCAGCCCATGTGCGCCGCCGATGAGGTCTTCTTCCAAGGCCAAATCCTCCCTCTTCGTCACTCTTTCAGCTCTGAAAATTCCCACAATAACCCCTTCTTTCCTAGAAATTCCTCCACCAGGTCGGAGTCTTCGGATATATTAAGGTTTAGAAATGGAAGCACCAGCAGCAGTAGCAGTAGAAGCCATTATTCCCGATCATCGAGTATTAGTAATAATTCCATTTCAATTCCGACGAATTCCAAGCCAAGACCACACAACAACGTTTTCCACTCTCACCCTAGTCCGACGCCCCAAATCAGATCCCATTCAACTTCCGGCCGCCGAAGCCGGAGTTCATCCCGGTGGGACTTTTTCCGGCTGGGTCTTCTCCGAACGCCGGGAATGGAACTTCACGACCTCAAAACTCGCACCAACTCCGCCTCGGCCGCAGCCACCCCGGCGGCGCATACAACAGCTGGCTCGTTTCTGGGTGTGGTGAGCTGCAAAAAATCAGTGGATACAGTAGCGGCGGCGGGGAAGAAGAAAAGGAGTGAAAATGGAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAGGGAAACGAGGGTGTCACATCGTCGAACATTTGAATGGGTAAAGCAGCTCTCGCATGCAAGCTCTGGTGACGAACAATAATCATTCATTCCCCACTTTCCTTTTCAATTTCACTTTTCTAACTTTGTTGTTTTCATTCATTTTTTACTTACAAGTCAAGAAGATATCTCCATCAAAGATTATTTATGTAAAGAGTTCATGGTGTTGTTTAACAAATGCATACATCAATGATGAATTGAATGATGTTATGATGGTTTATGATGAGGGAAATAGCTATGAATGGGATTGTTATGAAGGGTTTGGTGGGTTTTGTTTGAAAGAGAATTTTAGTGGTGAGAGGCAAGAGGATTATGGGGATACCAAAAAGA

Coding sequence (CDS)

ATGGGAAGAAGCTGCCATGGAGATGAAACATGGGAAGAACAGAACCAAATCCAAGAACAAGAAGACGAAGAAGCTTTATCTTTCTGTGACCTTCCTCTAAAAGAAACGCAGCCGCCTTTGAATCTAAATCAAACCCCGATCAGATCCTCCGCCGCCGTCCAAACAGAGGACTTTGATTTCAACCACTGCCCTCCGCCACTGCCGCAGCCCATGTGCGCCGCCGATGAGGTCTTCTTCCAAGGCCAAATCCTCCCTCTTCGTCACTCTTTCAGCTCTGAAAATTCCCACAATAACCCCTTCTTTCCTAGAAATTCCTCCACCAGGTCGGAGTCTTCGGATATATTAAGGTTTAGAAATGGAAGCACCAGCAGCAGTAGCAGTAGAAGCCATTATTCCCGATCATCGAGTATTAGTAATAATTCCATTTCAATTCCGACGAATTCCAAGCCAAGACCACACAACAACGTTTTCCACTCTCACCCTAGTCCGACGCCCCAAATCAGATCCCATTCAACTTCCGGCCGCCGAAGCCGGAGTTCATCCCGGTGGGACTTTTTCCGGCTGGGTCTTCTCCGAACGCCGGGAATGGAACTTCACGACCTCAAAACTCGCACCAACTCCGCCTCGGCCGCAGCCACCCCGGCGGCGCATACAACAGCTGGCTCGTTTCTGGGTGTGGTGAGCTGCAAAAAATCAGTGGATACAGTAGCGGCGGCGGGGAAGAAGAAAAGGAGTGAAAATGGAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAGGGAAACGAGGGTGTCACATCGTCGAACATTTGAATGGGTAAAGCAGCTCTCGCATGCAAGCTCTGGTGACGAACAATAA

Protein sequence

MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNQTPIRSSAAVQTEDFDFNHCPPPLPQPMCAADEVFFQGQILPLRHSFSSENSHNNPFFPRNSSTRSESSDILRFRNGSTSSSSSRSHYSRSSSISNNSISIPTNSKPRPHNNVFHSHPSPTPQIRSHSTSGRRSRSSSRWDFFRLGLLRTPGMELHDLKTRTNSASAAATPAAHTTAGSFLGVVSCKKSVDTVAAAGKKKRSENGKEKEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ

Homology

[Close]

BLAST of Cp4.1LG16g01270 vs. TrEMBL
Match: A0A0A0LPT6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G277620 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 7.7e-79
Identity = 192/313 (61.34%), Postives = 222/313 (70.93%), Query Frame = 1


Query: 3   RSCHGDETWEEQNQIQ----------EQEDEEALSFCDLPLKETQPPLNLNQTPIRSSAA 62
           RSCHGDE  EE+++ +          E+E+EEALS CDLP+KE Q P     T   S+  
Sbjct: 7   RSCHGDERCEEEDKEETQIDDDDDEEEEEEEEALSLCDLPVKEKQQP-----TRSVSTTV 66

Query: 63  VQTE-DFDFNHCPPPLPQPMCAADEVFFQGQILPLRHSFSSENSHNNPFFPRNSSTRSES 122
           V+T+ DFDFNH  PP P PM  AD++FFQG +LPLR SFSSENS NN     N   RSES
Sbjct: 67  VETDQDFDFNHWRPP-PSPMLTADDLFFQGHMLPLRLSFSSENSQNNN---GNLWCRSES 126

Query: 123 SD---ILRFRNGSTSSSSSRSHYSRSSSISNNSISIPTNSKPRP-HNNVFHSHPSPTPQI 182
            D   +LRFRN STSSSSSRSHYSRSSS+SNNSISIPTNSKPRP +NNVFHSHPSPTPQI
Sbjct: 127 MDGNNMLRFRNESTSSSSSRSHYSRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQI 186

Query: 183 RSHSTSGRRSRSSSRWDFFRLGLLRTPGMELHDLKTR--TNSASAAATPAAHTTAGSFLG 242
           RS STS  RSRSSSRW+FFRLGLLRTPGMELHDLKTR  T + +   T  AH T  S LG
Sbjct: 187 RSFSTSSHRSRSSSRWEFFRLGLLRTPGMELHDLKTRTTTTTTTTTTTSTAHKTTASILG 246

Query: 243 VVSCKKSVDTVAAA--------------GKKKRSENGKEKEKEKEKERETRVSHRRTFEW 285
           VVSCK+SV+TV                   KK +++ K + +EKEKE+E RVSHRRTFEW
Sbjct: 247 VVSCKRSVETVPTTTGSKNRIRRENVLENNKKNNDDNKVEIREKEKEKERRVSHRRTFEW 306

[Close]

BLAST of Cp4.1LG16g01270 vs. TrEMBL
Match: A0A0A0KJN1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G493900 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.3e-27
Identity = 131/354 (37.01%), Postives = 173/354 (48.87%), Query Frame = 1


Query: 1   MGRSCHGDETWEEQNQIQE-QEDEEALSFCDLPL---KETQPPLNLNQTPI--RSSAAVQ 60
           MGRS   +   E++  ++E  E++E+LS CDLP+   K+  P   L   P    +S A  
Sbjct: 3   MGRSYDSERCGEDKLYMEEPDENDESLSLCDLPINLVKDGNPHFLLEIKPRAGETSIAAA 62

Query: 61  TEDFDFNHC---------PPPLPQPMCAADEVFFQGQILPLRHSFSSENSHNNPFFPRNS 120
            ++FDF            PPP    MC ADEVF+QGQ+LP+R S SS+N+    +     
Sbjct: 63  DDEFDFGSLGGFSNLADQPPP---EMCLADEVFYQGQLLPVRLSVSSDNTSAGVYRRHLR 122

Query: 121 STRSESSDILRFRNGSTSSSSSRSHYSRSSSISNNSISIPTNSKPRPH---NNVFHSHPS 180
           S  S            + SSSSRS  S SSS++NNS++I T++   P     N+FHSHPS
Sbjct: 123 SINS------------SGSSSSRSQCS-SSSVTNNSLTI-TSAARNPQLRVPNLFHSHPS 182

Query: 181 PTPQI-------RSHSTSGRRSRSSSRWDFFRLGLLRTPGMELHDLK----TRTNS---- 240
           P PQI       R  ST G R +SS  WDFFRLG+++TPGMEL DLK    TR NS    
Sbjct: 183 PKPQIKASPMTFRQASTGGNRQKSSFGWDFFRLGVVKTPGMELEDLKHRSSTRRNSSVSR 242

Query: 241 --ASAAATPAAHTTAGS--------------------FLGVVSCKKSVDTVAAAGKK--- 280
             +  A  PA  +   S                     LG V CK SV++  A   K   
Sbjct: 243 SNSEKAFVPAPLSNERSVKVMMRKPRESVLIERKSRGILGGVGCKCSVESTVAPAPKAMV 302

[Close]

BLAST of Cp4.1LG16g01270 vs. TrEMBL
Match: A0A0S3T5E7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G184700 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.5e-26
Identity = 127/339 (37.46%), Postives = 172/339 (50.74%), Query Frame = 1


Query: 12  EEQNQIQEQEDEEALSFCDLPLK----ETQPPLNLNQTPIRSSAAVQT-EDFDFNHCPPP 71
           EE  +  E+E+ EALS CDLP+     ETQP       P   S  ++T EDFDF     P
Sbjct: 133 EEGEEEDEEEEIEALSLCDLPVNLINDETQPK------PEPDSQIIETREDFDFRLWGTP 192

Query: 72  LPQP--MCAADEVFFQGQILPLRHSFSSENSHNNPFFPRNSSTRSES---SDILRFRNGS 131
                 MCAADEVFFQGQILPLR S             +   +RSES     +  FR+ S
Sbjct: 193 FSSESEMCAADEVFFQGQILPLRLSL------------KRCQSRSESLGHGSLREFRSNS 252

Query: 132 TSSSSSRSHYSRSSSISNNSISIPTNSKPRPHN---NVFHSHPSPTPQIR----SHSTSG 191
           + SSS RS  S SSS S+ S + P  SKPRP N   N FH+HPSP PQ++      ++ G
Sbjct: 253 SRSSSIRSQNSTSSS-SSTSTTTPGISKPRPQNQNQNHFHAHPSPQPQLKVTIPRQTSFG 312

Query: 192 RRSRSSSRWDFFRLGLLRTPGMELHDLKTRTNSA------------------SAAATPAA 251
            + R SS WDFFRLG++  P + L DLK R+ +                   S +A   +
Sbjct: 313 NQGRKSSAWDFFRLGVVPAPEIALQDLKVRSTNGNNKNHIARNNSSNNSSNNSNSAVKRS 372

Query: 252 HTTAGS-----FLGV-----VSCKKSVDTVAA--------------------AGKKKRSE 285
           ++  G+     F+G+       CK SV+TV +                    A K+K  E
Sbjct: 373 YSAKGNHVLKQFVGIGGGFWSGCKCSVETVQSNITMIKGSTKSANKTESVTHAMKEKAVE 432

[Close]

BLAST of Cp4.1LG16g01270 vs. TrEMBL
Match: A0A0L9UR34_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g028000 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.5e-26
Identity = 127/339 (37.46%), Postives = 172/339 (50.74%), Query Frame = 1


Query: 12  EEQNQIQEQEDEEALSFCDLPLK----ETQPPLNLNQTPIRSSAAVQT-EDFDFNHCPPP 71
           EE  +  E+E+ EALS CDLP+     ETQP       P   S  ++T EDFDF     P
Sbjct: 19  EEGEEEDEEEEIEALSLCDLPVNLINDETQPK------PEPDSQIIETREDFDFRLWGTP 78

Query: 72  LPQP--MCAADEVFFQGQILPLRHSFSSENSHNNPFFPRNSSTRSES---SDILRFRNGS 131
                 MCAADEVFFQGQILPLR S             +   +RSES     +  FR+ S
Sbjct: 79  FSSESEMCAADEVFFQGQILPLRLSL------------KRCQSRSESLGHGSLREFRSNS 138

Query: 132 TSSSSSRSHYSRSSSISNNSISIPTNSKPRPHN---NVFHSHPSPTPQIR----SHSTSG 191
           + SSS RS  S SSS S+ S + P  SKPRP N   N FH+HPSP PQ++      ++ G
Sbjct: 139 SRSSSIRSQNSTSSS-SSTSTTTPGISKPRPQNQNQNHFHAHPSPQPQLKVTIPRQTSFG 198

Query: 192 RRSRSSSRWDFFRLGLLRTPGMELHDLKTRTNSA------------------SAAATPAA 251
            + R SS WDFFRLG++  P + L DLK R+ +                   S +A   +
Sbjct: 199 NQGRKSSAWDFFRLGVVPAPEIALQDLKVRSTNGNNKNHIARNNSSNNSSNNSNSAVKRS 258

Query: 252 HTTAGS-----FLGV-----VSCKKSVDTVAA--------------------AGKKKRSE 285
           ++  G+     F+G+       CK SV+TV +                    A K+K  E
Sbjct: 259 YSAKGNHVLKQFVGIGGGFWSGCKCSVETVQSNITMIKGSTKSANKTESVTHAMKEKAVE 318

[Close]

BLAST of Cp4.1LG16g01270 vs. TrEMBL
Match: A0A0D2RFS0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G028600 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.7e-25
Identity = 113/329 (34.35%), Postives = 166/329 (50.46%), Query Frame = 1


Query: 9   ETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNQTPIRSSAAVQTEDFDFNHCPPP-- 68
           E++EE+ +++++E EEALS CDLP+   +     N+    +    Q EDF+F   P    
Sbjct: 2   ESYEEKREVEDEEQEEALSLCDLPVNLIEEKELKNE---ENGEPSQEEDFNFGSWPGHGG 61

Query: 69  --LPQP-MCAADEVFFQGQILPLRHSFSSE------NSHNNPFFPRNSSTRSESSD---I 128
               +P MC ADEVFFQGQILPLRHS SS+      +SHN       S +RSES D   +
Sbjct: 62  SFRSEPEMCVADEVFFQGQILPLRHSVSSDTGFRRHDSHNMS----RSLSRSESMDHGSL 121

Query: 129 LRFRNGSTSSSSSRSHYSRSSSISNNSISIPTNSKPRPHNNVFHSHPSPTPQIRSHSTS- 188
            RF + S+SS+ S SHYS SS+ S + + I  N         F++HPSP PQIRS  T+ 
Sbjct: 122 SRFTSVSSSSTRSSSHYSTSSTNSKSGMKIRNN---------FNTHPSPKPQIRSTRTAV 181

Query: 189 -GRRSRSSSRWDFFRLGLLRTPGMELHDLKTRTNSASAAATPAAHTTAGSFLGVVSCKKS 248
             R  RSSS WDFF++GL+R P + L DLK +  + ++ +  ++  ++ S          
Sbjct: 182 NSRIQRSSSMWDFFKIGLVRAPELGLQDLKMKPRNKNSVSRNSSCNSSNSSSSTKLVNNG 241

Query: 249 VDTVAAAGKKKRSENG------------------------------KEKEKEK------- 281
             T   +  ++ S  G                              K  +K+K       
Sbjct: 242 SSTAEVSKNQQESNKGLVEKRMGLFSGCTCSVNAVETVPLNNNNNIKNSDKDKTTSHAAA 301

[Close]

BLAST of Cp4.1LG16g01270 vs. TAIR10
Match: AT5G67350.1 (AT5G67350.1 unknown protein)

HSP 1 Score: 68.9 bits (167), Expect = 5.6e-12
Identity = 92/313 (29.39%), Postives = 141/313 (45.05%), Query Frame = 1


Query: 12  EEQNQIQEQEDEEALSFCDLPLKETQPPLNLNQTPIRSSAAVQTEDFDF----------- 71
           E+ + ++E+E+EEALS CDLP ++ +         +RS    + E+FD            
Sbjct: 21  EDDDDVEEEEEEEALSLCDLPNEKGE---------LRSIVKEEDEEFDSGFEFGIGSSFR 80

Query: 72  --NHCPPPLPQPMCAADEVFFQGQILPLRHSFSSENSHNNPFFPRNSSTRSESSDILRFR 131
             +    P P+ M  ADE+FF+G+ILPLRHS S +   N    P    TRSES   + FR
Sbjct: 81  AGSDSCEPAPE-MSTADELFFKGRILPLRHSVSLDAGLNE---PTRLITRSES---VEFR 140

Query: 132 NGSTSSSSSRSHYSRSSSISNNSISIPTNSKPRPHNNVFHSHPSPTPQIRSHST------ 191
                 S  +        I NN I               +S PSP PQIR  S+      
Sbjct: 141 RTGIIRSDRK--------IKNNFID--------------YSQPSPQPQIRRSSSMTARVN 200

Query: 192 SGRRSRSSSRWDFFRLGLLRTPGMELHDLKTRTNSASAAATPAAHTTAGSFLGVVSCKKS 251
           S R  +SSS WDF RLGL+RTP +EL     RT + +A  + + +++  S     + KK 
Sbjct: 201 SIRNPKSSSIWDFLRLGLVRTPEIEL-----RTTAGNAKLSVSRNSSCSSTSTSSNSKKI 260

Query: 252 VDTVAAAGKKKRS----------------------ENGKEKEKEK--------EKERETR 276
               + +  ++RS                       +  E E+++        +KE ++ 
Sbjct: 261 GSGESRSRNRRRSFMFSDCKCSVSTETKMAPVKIKVSSGETEEKQRMMEKKTAKKEEKSA 290

[Close]

BLAST of Cp4.1LG16g01270 vs. NCBI nr
Match: gi|778669884|ref|XP_011649316.1| (PREDICTED: homeobox protein 6-like [Cucumis sativus])

HSP 1 Score: 302.0 bits (772), Expect = 1.1e-78
Identity = 192/313 (61.34%), Postives = 222/313 (70.93%), Query Frame = 1


Query: 3   RSCHGDETWEEQNQIQ----------EQEDEEALSFCDLPLKETQPPLNLNQTPIRSSAA 62
           RSCHGDE  EE+++ +          E+E+EEALS CDLP+KE Q P     T   S+  
Sbjct: 7   RSCHGDERCEEEDKEETQIDDDDDEEEEEEEEALSLCDLPVKEKQQP-----TRSVSTTV 66

Query: 63  VQTE-DFDFNHCPPPLPQPMCAADEVFFQGQILPLRHSFSSENSHNNPFFPRNSSTRSES 122
           V+T+ DFDFNH  PP P PM  AD++FFQG +LPLR SFSSENS NN     N   RSES
Sbjct: 67  VETDQDFDFNHWRPP-PSPMLTADDLFFQGHMLPLRLSFSSENSQNNN---GNLWCRSES 126

Query: 123 SD---ILRFRNGSTSSSSSRSHYSRSSSISNNSISIPTNSKPRP-HNNVFHSHPSPTPQI 182
            D   +LRFRN STSSSSSRSHYSRSSS+SNNSISIPTNSKPRP +NNVFHSHPSPTPQI
Sbjct: 127 MDGNNMLRFRNESTSSSSSRSHYSRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQI 186

Query: 183 RSHSTSGRRSRSSSRWDFFRLGLLRTPGMELHDLKTR--TNSASAAATPAAHTTAGSFLG 242
           RS STS  RSRSSSRW+FFRLGLLRTPGMELHDLKTR  T + +   T  AH T  S LG
Sbjct: 187 RSFSTSSHRSRSSSRWEFFRLGLLRTPGMELHDLKTRTTTTTTTTTTTSTAHKTTASILG 246

Query: 243 VVSCKKSVDTVAAA--------------GKKKRSENGKEKEKEKEKERETRVSHRRTFEW 285
           VVSCK+SV+TV                   KK +++ K + +EKEKE+E RVSHRRTFEW
Sbjct: 247 VVSCKRSVETVPTTTGSKNRIRRENVLENNKKNNDDNKVEIREKEKEKERRVSHRRTFEW 306

[Close]

BLAST of Cp4.1LG16g01270 vs. NCBI nr
Match: gi|659115855|ref|XP_008457772.1| (PREDICTED: histone-lysine N-methyltransferase, H3 lysine-79 specific [Cucumis melo])

HSP 1 Score: 300.1 bits (767), Expect = 4.2e-78
Identity = 195/307 (63.52%), Postives = 223/307 (72.64%), Query Frame = 1


Query: 3   RSCHGDETW-----EEQNQIQEQEDEE--ALSFCDLPLKETQPPLNLNQTPIRSSAAVQT 62
           RSCHGDE       +E+ QI + +DEE  ALS CDLP+KE Q P     T   S+  V+T
Sbjct: 7   RSCHGDERSCEEEDKEETQIDDDDDEEEEALSLCDLPVKEKQQP-----TRSVSATIVET 66

Query: 63  EDFDFNHCPPPLPQPMCAADEVFFQGQILPLRHSFSSENSHNNPFFPRNSSTRSESSD-- 122
           EDFDFN+  PP P PM  AD++FFQG +LPLR SFSSENS NN     N  +RSES D  
Sbjct: 67  EDFDFNNWRPP-PSPMLTADDLFFQGHMLPLRLSFSSENSQNNN---GNLWSRSESMDRN 126

Query: 123 -ILRFRNGSTSSSSSRSHYSRSSSISNNSISIPT-NSKPRP-HNNVFHSHPSPTPQIRSH 182
            +LRFRNGSTSSSSSRSHYSRSSS+SNNSISIPT N+KPRP +NNVFHSHPSPTPQIRS 
Sbjct: 127 NMLRFRNGSTSSSSSRSHYSRSSSLSNNSISIPTTNTKPRPSNNNVFHSHPSPTPQIRSF 186

Query: 183 STSGRRSRSSSRWDFFRLGLLRTPGMELHDLKTRTNSASAAATPAAHTTAGSFLGVVSCK 242
           STS  RSRSSSRW+FFRLGLLRTPGMELHDLKTRT + +   T   H T  S LGVVSCK
Sbjct: 187 STSSHRSRSSSRWEFFRLGLLRTPGMELHDLKTRTTTTTTT-TMTTHKTTASILGVVSCK 246

Query: 243 KSVDTV----AAAGKKKRSENGKEK---------EKEKEKERETRVSHRRTFEWVKQLSH 285
           +SVDTV     ++  + R EN  +K         EKEKEKE+E RVSHRRTFEW+KQLSH
Sbjct: 247 RSVDTVPTTTGSSNNRIRRENVLKKNNNNKVEIREKEKEKEKERRVSHRRTFEWLKQLSH 303

[Close]

BLAST of Cp4.1LG16g01270 vs. NCBI nr
Match: gi|659079605|ref|XP_008440345.1| (PREDICTED: probable membrane-associated kinase regulator 1 [Cucumis melo])

HSP 1 Score: 132.9 bits (333), Expect = 8.9e-28
Identity = 135/348 (38.79%), Postives = 174/348 (50.00%), Query Frame = 1


Query: 1   MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPL---KETQPPLNLNQTPI--RSSAAVQT 60
           MGRS   ++  +E    +  E +E+LS CDLP+   K+  P   L   P   ++S A   
Sbjct: 3   MGRSYDNEKCEDELYMEEPDEKDESLSLCDLPINLVKDDNPHFLLEIKPRAGKASIAAAD 62

Query: 61  EDFDFNHC---------PPPLPQPMCAADEVFFQGQILPLRHSFSSENSHNNPFFPRNSS 120
           +DFDF            PPP    MC ADEVF+QGQ+LPLR S SS+N+    +     S
Sbjct: 63  DDFDFGSLGGFSNLADQPPP---EMCLADEVFYQGQLLPLRLSVSSDNTSAGVYRRHLRS 122

Query: 121 TRSESSDILRFRNGSTSSSSSRSHYSRSSSISNNSISIPTNSK-PRPH-NNVFHSHPSPT 180
             S            + SSSSRS  S SSS++NNS++  + ++ PR    N+FHSHPSP 
Sbjct: 123 INS------------SGSSSSRSQCS-SSSVTNNSLTTTSAARDPRLRVPNLFHSHPSPK 182

Query: 181 PQI-------RSHSTSGRRSRSSSRWDFFRLGLLRTPGMELHDLK----TRTNS------ 240
           PQI       R  ST G R +SS  WDFFRLG+++TPGMEL DLK    TR NS      
Sbjct: 183 PQIKASPITSRQASTGGNRQKSSFTWDFFRLGVVKTPGMELEDLKHRSSTRRNSSVSRSN 242

Query: 241 ASAAATPAAHTTAGS--------------------FLGVVSCKKSV-DTVAAAGKK---- 280
           +  A  PAA +   S                     L  V CK SV  TVA A K     
Sbjct: 243 SEKAFVPAAPSNERSVKVMMRRPRESVLIERKSSGILSGVGCKCSVGSTVAPAPKAMVVV 302

[Close]

BLAST of Cp4.1LG16g01270 vs. NCBI nr
Match: gi|700193378|gb|KGN48582.1| (hypothetical protein Csa_6G493900 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 7.6e-27
Identity = 131/354 (37.01%), Postives = 173/354 (48.87%), Query Frame = 1


Query: 1   MGRSCHGDETWEEQNQIQE-QEDEEALSFCDLPL---KETQPPLNLNQTPI--RSSAAVQ 60
           MGRS   +   E++  ++E  E++E+LS CDLP+   K+  P   L   P    +S A  
Sbjct: 3   MGRSYDSERCGEDKLYMEEPDENDESLSLCDLPINLVKDGNPHFLLEIKPRAGETSIAAA 62

Query: 61  TEDFDFNHC---------PPPLPQPMCAADEVFFQGQILPLRHSFSSENSHNNPFFPRNS 120
            ++FDF            PPP    MC ADEVF+QGQ+LP+R S SS+N+    +     
Sbjct: 63  DDEFDFGSLGGFSNLADQPPP---EMCLADEVFYQGQLLPVRLSVSSDNTSAGVYRRHLR 122

Query: 121 STRSESSDILRFRNGSTSSSSSRSHYSRSSSISNNSISIPTNSKPRPH---NNVFHSHPS 180
           S  S            + SSSSRS  S SSS++NNS++I T++   P     N+FHSHPS
Sbjct: 123 SINS------------SGSSSSRSQCS-SSSVTNNSLTI-TSAARNPQLRVPNLFHSHPS 182

Query: 181 PTPQI-------RSHSTSGRRSRSSSRWDFFRLGLLRTPGMELHDLK----TRTNS---- 240
           P PQI       R  ST G R +SS  WDFFRLG+++TPGMEL DLK    TR NS    
Sbjct: 183 PKPQIKASPMTFRQASTGGNRQKSSFGWDFFRLGVVKTPGMELEDLKHRSSTRRNSSVSR 242

Query: 241 --ASAAATPAAHTTAGS--------------------FLGVVSCKKSVDTVAAAGKK--- 280
             +  A  PA  +   S                     LG V CK SV++  A   K   
Sbjct: 243 SNSEKAFVPAPLSNERSVKVMMRKPRESVLIERKSRGILGGVGCKCSVESTVAPAPKAMV 302

[Close]

BLAST of Cp4.1LG16g01270 vs. NCBI nr
Match: gi|778722421|ref|XP_011658482.1| (PREDICTED: probable membrane-associated kinase regulator 1 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 7.6e-27
Identity = 131/354 (37.01%), Postives = 173/354 (48.87%), Query Frame = 1


Query: 1   MGRSCHGDETWEEQNQIQE-QEDEEALSFCDLPL---KETQPPLNLNQTPI--RSSAAVQ 60
           MGRS   +   E++  ++E  E++E+LS CDLP+   K+  P   L   P    +S A  
Sbjct: 1   MGRSYDSERCGEDKLYMEEPDENDESLSLCDLPINLVKDGNPHFLLEIKPRAGETSIAAA 60

Query: 61  TEDFDFNHC---------PPPLPQPMCAADEVFFQGQILPLRHSFSSENSHNNPFFPRNS 120
            ++FDF            PPP    MC ADEVF+QGQ+LP+R S SS+N+    +     
Sbjct: 61  DDEFDFGSLGGFSNLADQPPP---EMCLADEVFYQGQLLPVRLSVSSDNTSAGVYRRHLR 120

Query: 121 STRSESSDILRFRNGSTSSSSSRSHYSRSSSISNNSISIPTNSKPRPH---NNVFHSHPS 180
           S  S            + SSSSRS  S SSS++NNS++I T++   P     N+FHSHPS
Sbjct: 121 SINS------------SGSSSSRSQCS-SSSVTNNSLTI-TSAARNPQLRVPNLFHSHPS 180

Query: 181 PTPQI-------RSHSTSGRRSRSSSRWDFFRLGLLRTPGMELHDLK----TRTNS---- 240
           P PQI       R  ST G R +SS  WDFFRLG+++TPGMEL DLK    TR NS    
Sbjct: 181 PKPQIKASPMTFRQASTGGNRQKSSFGWDFFRLGVVKTPGMELEDLKHRSSTRRNSSVSR 240

Query: 241 --ASAAATPAAHTTAGS--------------------FLGVVSCKKSVDTVAAAGKK--- 280
             +  A  PA  +   S                     LG V CK SV++  A   K   
Sbjct: 241 SNSEKAFVPAPLSNERSVKVMMRKPRESVLIERKSRGILGGVGCKCSVESTVAPAPKAMV 300

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g01270 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG16g01270 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPT6_CUCSA	7.7e-79	61.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G277620 PE=4 SV=1	[more]
A0A0A0KJN1_CUCSA	5.3e-27	37.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G493900 PE=4 SV=1	[more]
A0A0S3T5E7_PHAAN	4.5e-26	37.46	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G184700 PE=...	[more]
A0A0L9UR34_PHAAN	4.5e-26	37.46	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g028000 PE=4 SV=1	[more]
A0A0D2RFS0_GOSRA	1.7e-25	34.35	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G028600 PE=4 SV=1	[more]

BLAST of Cp4.1LG16g01270 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G67350.1	5.6e-12	29.39	unknown protein	[more]

BLAST of Cp4.1LG16g01270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778669884\|ref\|XP_011649316.1\|	1.1e-78	61.34	PREDICTED: homeobox protein 6-like [Cucumis sativus]	[more]
gi\|659115855\|ref\|XP_008457772.1\|	4.2e-78	63.52	PREDICTED: histone-lysine N-methyltransferase, H3 lysine-79 specific [Cucumis me...	[more]
gi\|659079605\|ref\|XP_008440345.1\|	8.9e-28	38.79	PREDICTED: probable membrane-associated kinase regulator 1 [Cucumis melo]	[more]
gi\|700193378\|gb\|KGN48582.1\|	7.6e-27	37.01	hypothetical protein Csa_6G493900 [Cucumis sativus]	[more]
gi\|778722421\|ref\|XP_011658482.1\|	7.6e-27	37.01	PREDICTED: probable membrane-associated kinase regulator 1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g01270.1	Cp4.1LG16g01270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33922	FAMILY NOT NAMED	coord: 12..284 score: 7.7
None	No IPR available	PANTHER	PTHR33922:SF2	SUBFAMILY NOT NAMED	coord: 12..284 score: 7.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG16g01270	Cucsa.367140	Cucumber (Gy14) v1	cgycpeB0970
Cp4.1LG16g01270	Cucsa.102920	Cucumber (Gy14) v1	cgycpeB0217
Cp4.1LG16g01270	CmaCh20G009900	Cucurbita maxima (Rimu)	cmacpeB565
Cp4.1LG16g01270	CmoCh20G010090	Cucurbita moschata (Rifu)	cmocpeB517
Cp4.1LG16g01270	Cla014003	Watermelon (97103) v1	cpewmB285
Cp4.1LG16g01270	Csa6G493900	Cucumber (Chinese Long) v2	cpecuB297
Cp4.1LG16g01270	MELO3C007607	Melon (DHL92) v3.5.1	cpemeB282
Cp4.1LG16g01270	ClCG01G017290	Watermelon (Charleston Gray)	cpewcgB254
Cp4.1LG16g01270	CSPI06G28640	Wild cucumber (PI 183967)	cpecpiB299
Cp4.1LG16g01270	CSPI02G13970	Wild cucumber (PI 183967)	cpecpiB274
Cp4.1LG16g01270	Lsi01G009240	Bottle gourd (USVL1VR-Ls)	cpelsiB236

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG16g01270	Cucumber (Chinese Long) v3	cpecucB0338
Cp4.1LG16g01270	Cucumber (Chinese Long) v3	cpecucB0364
Cp4.1LG16g01270	Wax gourd	cpewgoB0359
Cp4.1LG16g01270	Wax gourd	cpewgoB0366
Cp4.1LG16g01270	Wax gourd	cpewgoB0370
Cp4.1LG16g01270	Cucurbita pepo (Zucchini)	cpecpeB309
Cp4.1LG16g01270	Cucumber (Gy14) v1	cgycpeB0972
Cp4.1LG16g01270	Cucurbita maxima (Rimu)	cmacpeB626
Cp4.1LG16g01270	Cucurbita moschata (Rifu)	cmocpeB575
Cp4.1LG16g01270	Wild cucumber (PI 183967)	cpecpiB275
Cp4.1LG16g01270	Cucumber (Chinese Long) v2	cpecuB272
Cp4.1LG16g01270	Bottle gourd (USVL1VR-Ls)	cpelsiB225
Cp4.1LG16g01270	Watermelon (Charleston Gray)	cpewcgB262
Cp4.1LG16g01270	Watermelon (97103) v1	cpewmB294
Cp4.1LG16g01270	Melon (DHL92) v3.5.1	cpemeB264
Cp4.1LG16g01270	Cucumber (Gy14) v2	cgybcpeB197
Cp4.1LG16g01270	Cucumber (Gy14) v2	cgybcpeB772
Cp4.1LG16g01270	Melon (DHL92) v3.6.1	cpemedB310
Cp4.1LG16g01270	Melon (DHL92) v3.6.1	cpemedB328
Cp4.1LG16g01270	Silver-seed gourd	carcpeB0576