Cp4.1LG16g01220 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTCGATTGGTTGTAGTTTCACTTCCTTATCGCTTCCGCAATTTAGGGCCAATAGTTTTTCGATTCAGGAGCTGTTGTTTGGTCCTCGTCGGAGGCCTCCATCGCCGATTGTTCATGCATCGGTTTCTCAGAGCTTTCCGGCGTCTTCTCGCTTTCCGGAGCAGCGGAAATCTACTTCTCTTTCCGCTAGCGGCACCTTGATGGCCAATTCCGCGCCGGTGTGTTGTTCTGTTTTCTTTTTTTGTTCGTAGTGGTGAATTCGAGTTATTGATTATCTTGTCTCGAATGTTTCGTTGTGATTGAGATGAATATACTTGATTTACCAAAAGAAACTTCCGTCTAGGCCTTTGATTTACCAAAATATAGTACTTCACTGCTAAAAAATTCTTCCCCCTCACGTTCTCTGCTTAAAACCAACCAGATGATCATATATAAGTCCATTCTGAAATAAATCCTGAAAAAAATTCCTTATAGTCTGTCTTCCTCTACAGAACGCTCTCAAGTTAGTGGATGCTGTTCGTGAAAAAAAGTGTTTACTATCTCCTTCTTTGATCCACTCACTTTGGAATTGAAATATATACTCATGATCATTGTTCTACTGAATAGCTGTATTATTTTTTTTCCAGGGTGTTAGAAATTTATTCTTCTTTCTTTAATATTTTGATATGCAGTCGAGAAGTGGTGTATACACAGTTGGTGACTTCATGACTAGGAGAGAGGAGTTGCATGTCGTAAAGCCCACAACCAGTGTCGATGAAGGTAATTGAAATTTATGGATATTTTCTTCCAAACTATTGGAAAAATGTGGCTTATATTGTGTCTGTTTATGCATACAGCATTAGAAATTCTGGTGGAAAAAAGGATCACGGGATTTCCAGTAATTGATGACAATTGGAACTTGGTATCATTTCATTTCCCATATTTATAAGACAGATTTCTCTTCTATGGTTATGTGTTTATCTTGTTGCCCTGTTTGCAAGTACTTCTGAAGTTGTTGAGCTCTGTCCAGGATTTTCCATCAAATTGTTTACGTGATTTGTCAAGCTTTTACTTTTCACACTATGGCTTGTATGATCATGAGAGAATCTAATTTGCAGTACTTCCCCATCCAGAATTAAATTGGGAATCCATTTTTAATGCTTATAATTTGTGTAAATGCTCATGTGAATTTCTTTGTGGACCCGTTTAACTGCGTATGATTGATTCAAGTGGCCTAACATTGGATATTCGATCATCGACCCTCATAATAGAAATTACTTCATGATGTAGGTTGGCGTAGTTTCAGACTATGACTTGTTAGCGCTAGACTCCATCTCAGGTATATTTGAAATTTCTTGTTATTCCTGTCAACATGTTGTCTGCTTCCACTCTTTACCACTACCATTGTTTATCCTGTTTGAAAAAGATTGCTTAGCTATGATTGTTTTTCAGCGAAGTTACCTAAAGCGTTAAAGAAGAGAGAATTTAGCTTTTCTAGTATCATTTATCACTCGTGAATTATGTTAGCCATCACCTTAATCTGAGAATATTTGAGGTTGGAGAAGAGGGTGAAGAATGTAGCAAATTCTTGTTATTATGAACTTTGAGTCATTCTTTGATCTCAAAGAAAAGTGACTAATTTCCTTTTCTATATTACAAATAATTTAGTAATTTGACGAAATTGGTATGACTGCACTTATACAAGTTCCAAGTCAATGTTATAATTAGGTGGTGGAAGGACAGATCCAAGTATGTTTCCTGAAGTTGACAGCTCCTGGAAAGTATGCAATTACCTCCTTTTCTGGCGTTTATTTGCAGTTATTTTGTTTCACATCTTTTGCCATCAGTGTTCCTGATGACTTTATTTGTGCAATGATTTCATCCAAGTATTAAAAGAAGTAGAAAACTCAACTTTATATATATAAAAAAAAAGTAGATAAAGTAAAAGTTACTGATTAGTTCGTTGAAAAGCGCTTTATTTCACGAGTTTTAAGTCACAAATGCCACCAACAGGTCAGGCTATATTTGCAAGAAGCATGAATTTAAGTTTACTTGGTTAAAGATTTCTTTCTCGAGCATAGTGTTTATTTCTCACTGATCACTGATTTAGGCCTTGATTTGTCTCTTCATTTATGCTTTTGATTCTTTTTTGTTCATGAACCTCGGTGTCGGATTTGACAATGGGCAAATGAAGGGTAAACTATGCATTTTAACAAAATAATTATGCTTTTTCCTACTTTTCATGGTACAAATGACCAAAAACCTTCAATAGTTCTGACTTCAAATTCATGTTAATCTGTCATTTACTTATTTCAATAGTCTGCTACTCACTAGTTTGTAGAGGACGTGAAATGGAAGTGATTTCTCTAATCCAAACTCATCCTTGTAGACATTCAATGAGGTACAAAGGCTCCTCAGCAAAACGAACGGAAAGGTGATCGGCGATTTGATGACACCGGCACCTCTTGTCGTTCGAGAAACCACCAATCTTGAGGATGCTGCTAGGTTTTTACATGCTTGTCTCTTCCCGTGTATCTTCCAACTGTTTTCTGGTGTCAGAATTTTGAAGCATTCCTTTCTGTTTACCAAATGCAGATTATTGCTTAAGACAAAGTATCGCCGGCTACCAGTGGTAGATGCCAAGGGAAAGCTGGTAAGAGATCTATTCTTCTACTGTTCTAATTTGAATGAATGGTTGAGTTGTTGTAGTGTGTAGCGTAAAATGATGAAATCTTTATTAATGAAGGTTGGAATTATTACAAGAGGCAATGTGGTAAGAGCTGCTCTACAAATGAAGCATGCCCAAGAAAACTGAACATCATTTTCTCAAATCTTGCATGCTGTTAGGTTAGCACACAGGATTCTGAAGTGCAATCATACAGTTTTGGCTCATGATTATATGAACATCATCATGATTATATTGTGTTGTAGTTGGTGATTTGAGCAAGCTGTAGAAGTTGGGAATTAGGTATTAGACCAGACTTTTAAAGTGTCAAATAGGCATCAGGCTATTCAATGTTTGTATTTTTCTAGTACTTTTAATGCTCAAGCTTGAAATTAAATCTTTGTATTTAATACAAAATTAAAATTCTAAACATTTATTGCTTTGGGTATGAATTAAACTCTAATGTAATCTAAGGCAGAGTCCGTGAGTAGGTAAAATTTTGAATTATGGT ATGGATTTCACTTCCTTATCGCTTCCGCAATTTAGGGCCAATAGTTTTTCGATTCAGGAGCTGTTGTTTGGTCCTCGTCGGAGGCCTCCATCGCCGATTGTTCATGCATCGGTTTCTCAGAGCTTTCCGGCGTCTTCTCGCTTTCCGGAGCAGCGGAAATCTACTTCTCTTTCCGCTAGCGGCACCTTGATGGCCAATTCCGCGCCGTCGAGAAGTGGTGTATACACAGTTGGTGACTTCATGACTAGGAGAGAGGAGTTGCATGTCGTAAAGCCCACAACCAGTGTCGATGAAGCATTAGAAATTCTGGTGGAAAAAAGGATCACGGGATTTCCAGTAATTGATGACAATTGGAACTTGGTTGGCGTAGTTTCAGACTATGACTTGTTAGCGCTAGACTCCATCTCAGGTGGTGGAAGGACAGATCCAAGTATGTTTCCTGAAGTTGACAGCTCCTGGAAAACATTCAATGAGGTACAAAGGCTCCTCAGCAAAACGAACGGAAAGGTGATCGGCGATTTGATGACACCGGCACCTCTTGTCGTTCGAGAAACCACCAATCTTGAGGATGCTGCTAGATTATTGCTTAAGACAAAGTATCGCCGGCTACCAGTGGTAGATGCCAAGGGAAAGCTGGTTGGAATTATTACAAGAGGCAATGTGGTAAGAGCTGCTCTACAAATGAAGCATGCCCAAGAAAACTGAACATCATTTTCTCAAATCTTGCATGCTGTTAGGTTAGCACACAGGATTCTGAAGTGCAATCATACAGTTTTGGCTCATGATTATATGAACATCATCATGATTATATTGTGTTGTAGTTGGTGATTTGAGCAAGCTGTAGAAGTTGGGAATTAGGTATTAGACCAGACTTTTAAAGTGTCAAATAGGCATCAGGCTATTCAATGTTTGTATTTTTCTAGTACTTTTAATGCTCAAGCTTGAAATTAAATCTTTGTATTTAATACAAAATTAAAATTCTAAACATTTATTGCTTTGGGTATGAATTAAACTCTAATGTAATCTAAGGCAGAGTCCGTGAGTAGGTAAAATTTTGAATTATGGT ATGGATTTCACTTCCTTATCGCTTCCGCAATTTAGGGCCAATAGTTTTTCGATTCAGGAGCTGTTGTTTGGTCCTCGTCGGAGGCCTCCATCGCCGATTGTTCATGCATCGGTTTCTCAGAGCTTTCCGGCGTCTTCTCGCTTTCCGGAGCAGCGGAAATCTACTTCTCTTTCCGCTAGCGGCACCTTGATGGCCAATTCCGCGCCGTCGAGAAGTGGTGTATACACAGTTGGTGACTTCATGACTAGGAGAGAGGAGTTGCATGTCGTAAAGCCCACAACCAGTGTCGATGAAGCATTAGAAATTCTGGTGGAAAAAAGGATCACGGGATTTCCAGTAATTGATGACAATTGGAACTTGGTTGGCGTAGTTTCAGACTATGACTTGTTAGCGCTAGACTCCATCTCAGGTGGTGGAAGGACAGATCCAAGTATGTTTCCTGAAGTTGACAGCTCCTGGAAAACATTCAATGAGGTACAAAGGCTCCTCAGCAAAACGAACGGAAAGGTGATCGGCGATTTGATGACACCGGCACCTCTTGTCGTTCGAGAAACCACCAATCTTGAGGATGCTGCTAGATTATTGCTTAAGACAAAGTATCGCCGGCTACCAGTGGTAGATGCCAAGGGAAAGCTGGTTGGAATTATTACAAGAGGCAATGTGGTAAGAGCTGCTCTACAAATGAAGCATGCCCAAGAAAACTGA MDFTSLSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGTLMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGVVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVRETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN
BLAST of Cp4.1LG16g01220 vs. Swiss-Prot
Match: CBSX1_ARATH (CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana GN=CBSX1 PE=1 SV=2) HSP 1 Score: 297.0 bits (759), Expect = 1.8e-79 Identity = 156/226 (69.03%), Postives = 182/226 (80.53%), Query Frame = 1
BLAST of Cp4.1LG16g01220 vs. Swiss-Prot
Match: CBSX2_ARATH (CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana GN=CBSX2 PE=1 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 1.2e-70 Identity = 141/221 (63.80%), Postives = 175/221 (79.19%), Query Frame = 1
BLAST of Cp4.1LG16g01220 vs. Swiss-Prot
Match: Y1426_METJA (Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1426 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.8e-10 Identity = 38/143 (26.57%), Postives = 77/143 (53.85%), Query Frame = 1
BLAST of Cp4.1LG16g01220 vs. Swiss-Prot
Match: Y8960_DICDI (CBS domain-containing protein DDB_G0289609 OS=Dictyostelium discoideum GN=DDB_G0289609 PE=2 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.9e-08 Identity = 40/138 (28.99%), Postives = 69/138 (50.00%), Query Frame = 1
BLAST of Cp4.1LG16g01220 vs. Swiss-Prot
Match: IMDH_AQUAE (Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain VF5) GN=guaB PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 8.4e-08 Identity = 40/135 (29.63%), Postives = 67/135 (49.63%), Query Frame = 1
BLAST of Cp4.1LG16g01220 vs. TrEMBL
Match: A0A0A0LSY7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G152500 PE=4 SV=1) HSP 1 Score: 375.2 bits (962), Expect = 5.9e-101 Identity = 195/231 (84.42%), Postives = 209/231 (90.48%), Query Frame = 1
BLAST of Cp4.1LG16g01220 vs. TrEMBL
Match: F6H4H6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00200 PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 8.9e-81 Identity = 162/213 (76.06%), Postives = 185/213 (86.85%), Query Frame = 1
BLAST of Cp4.1LG16g01220 vs. TrEMBL
Match: A0A067GUY1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025613mg PE=4 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 1.5e-80 Identity = 157/190 (82.63%), Postives = 173/190 (91.05%), Query Frame = 1
BLAST of Cp4.1LG16g01220 vs. TrEMBL
Match: V4UIP6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026357mg PE=4 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 3.4e-80 Identity = 157/190 (82.63%), Postives = 172/190 (90.53%), Query Frame = 1
BLAST of Cp4.1LG16g01220 vs. TrEMBL
Match: A0A067GUL0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025613mg PE=4 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 1.1e-78 Identity = 157/195 (80.51%), Postives = 173/195 (88.72%), Query Frame = 1
BLAST of Cp4.1LG16g01220 vs. TAIR10
Match: AT4G36910.1 (AT4G36910.1 Cystathionine beta-synthase (CBS) family protein) HSP 1 Score: 297.0 bits (759), Expect = 1.0e-80 Identity = 156/226 (69.03%), Postives = 182/226 (80.53%), Query Frame = 1
BLAST of Cp4.1LG16g01220 vs. TAIR10
Match: AT4G34120.1 (AT4G34120.1 Cystathionine beta-synthase (CBS) family protein) HSP 1 Score: 267.7 bits (683), Expect = 6.7e-72 Identity = 141/221 (63.80%), Postives = 175/221 (79.19%), Query Frame = 1
BLAST of Cp4.1LG16g01220 vs. NCBI nr
Match: gi|449443418|ref|XP_004139474.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis sativus]) HSP 1 Score: 375.2 bits (962), Expect = 8.5e-101 Identity = 195/231 (84.42%), Postives = 209/231 (90.48%), Query Frame = 1
BLAST of Cp4.1LG16g01220 vs. NCBI nr
Match: gi|659071762|ref|XP_008461810.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis melo]) HSP 1 Score: 372.5 bits (955), Expect = 5.5e-100 Identity = 195/231 (84.42%), Postives = 208/231 (90.04%), Query Frame = 1
BLAST of Cp4.1LG16g01220 vs. NCBI nr
Match: gi|225438783|ref|XP_002283079.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic [Vitis vinifera]) HSP 1 Score: 308.1 bits (788), Expect = 1.3e-80 Identity = 162/213 (76.06%), Postives = 185/213 (86.85%), Query Frame = 1
BLAST of Cp4.1LG16g01220 vs. NCBI nr
Match: gi|641860427|gb|KDO79116.1| (hypothetical protein CISIN_1g025613mg [Citrus sinensis]) HSP 1 Score: 307.4 bits (786), Expect = 2.2e-80 Identity = 157/190 (82.63%), Postives = 173/190 (91.05%), Query Frame = 1
BLAST of Cp4.1LG16g01220 vs. NCBI nr
Match: gi|568883420|ref|XP_006494468.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic isoform X1 [Citrus sinensis]) HSP 1 Score: 307.4 bits (786), Expect = 2.2e-80 Identity = 157/190 (82.63%), Postives = 173/190 (91.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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