Cp4.1LG16g01220 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG16g01220
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCystathionine beta-synthase (CBS) family protein
LocationCp4.1LG16 : 2665307 .. 2668465 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCGATTGGTTGTAGTTTCACTTCCTTATCGCTTCCGCAATTTAGGGCCAATAGTTTTTCGATTCAGGAGCTGTTGTTTGGTCCTCGTCGGAGGCCTCCATCGCCGATTGTTCATGCATCGGTTTCTCAGAGCTTTCCGGCGTCTTCTCGCTTTCCGGAGCAGCGGAAATCTACTTCTCTTTCCGCTAGCGGCACCTTGATGGCCAATTCCGCGCCGGTGTGTTGTTCTGTTTTCTTTTTTTGTTCGTAGTGGTGAATTCGAGTTATTGATTATCTTGTCTCGAATGTTTCGTTGTGATTGAGATGAATATACTTGATTTACCAAAAGAAACTTCCGTCTAGGCCTTTGATTTACCAAAATATAGTACTTCACTGCTAAAAAATTCTTCCCCCTCACGTTCTCTGCTTAAAACCAACCAGATGATCATATATAAGTCCATTCTGAAATAAATCCTGAAAAAAATTCCTTATAGTCTGTCTTCCTCTACAGAACGCTCTCAAGTTAGTGGATGCTGTTCGTGAAAAAAAGTGTTTACTATCTCCTTCTTTGATCCACTCACTTTGGAATTGAAATATATACTCATGATCATTGTTCTACTGAATAGCTGTATTATTTTTTTTCCAGGGTGTTAGAAATTTATTCTTCTTTCTTTAATATTTTGATATGCAGTCGAGAAGTGGTGTATACACAGTTGGTGACTTCATGACTAGGAGAGAGGAGTTGCATGTCGTAAAGCCCACAACCAGTGTCGATGAAGGTAATTGAAATTTATGGATATTTTCTTCCAAACTATTGGAAAAATGTGGCTTATATTGTGTCTGTTTATGCATACAGCATTAGAAATTCTGGTGGAAAAAAGGATCACGGGATTTCCAGTAATTGATGACAATTGGAACTTGGTATCATTTCATTTCCCATATTTATAAGACAGATTTCTCTTCTATGGTTATGTGTTTATCTTGTTGCCCTGTTTGCAAGTACTTCTGAAGTTGTTGAGCTCTGTCCAGGATTTTCCATCAAATTGTTTACGTGATTTGTCAAGCTTTTACTTTTCACACTATGGCTTGTATGATCATGAGAGAATCTAATTTGCAGTACTTCCCCATCCAGAATTAAATTGGGAATCCATTTTTAATGCTTATAATTTGTGTAAATGCTCATGTGAATTTCTTTGTGGACCCGTTTAACTGCGTATGATTGATTCAAGTGGCCTAACATTGGATATTCGATCATCGACCCTCATAATAGAAATTACTTCATGATGTAGGTTGGCGTAGTTTCAGACTATGACTTGTTAGCGCTAGACTCCATCTCAGGTATATTTGAAATTTCTTGTTATTCCTGTCAACATGTTGTCTGCTTCCACTCTTTACCACTACCATTGTTTATCCTGTTTGAAAAAGATTGCTTAGCTATGATTGTTTTTCAGCGAAGTTACCTAAAGCGTTAAAGAAGAGAGAATTTAGCTTTTCTAGTATCATTTATCACTCGTGAATTATGTTAGCCATCACCTTAATCTGAGAATATTTGAGGTTGGAGAAGAGGGTGAAGAATGTAGCAAATTCTTGTTATTATGAACTTTGAGTCATTCTTTGATCTCAAAGAAAAGTGACTAATTTCCTTTTCTATATTACAAATAATTTAGTAATTTGACGAAATTGGTATGACTGCACTTATACAAGTTCCAAGTCAATGTTATAATTAGGTGGTGGAAGGACAGATCCAAGTATGTTTCCTGAAGTTGACAGCTCCTGGAAAGTATGCAATTACCTCCTTTTCTGGCGTTTATTTGCAGTTATTTTGTTTCACATCTTTTGCCATCAGTGTTCCTGATGACTTTATTTGTGCAATGATTTCATCCAAGTATTAAAAGAAGTAGAAAACTCAACTTTATATATATAAAAAAAAAGTAGATAAAGTAAAAGTTACTGATTAGTTCGTTGAAAAGCGCTTTATTTCACGAGTTTTAAGTCACAAATGCCACCAACAGGTCAGGCTATATTTGCAAGAAGCATGAATTTAAGTTTACTTGGTTAAAGATTTCTTTCTCGAGCATAGTGTTTATTTCTCACTGATCACTGATTTAGGCCTTGATTTGTCTCTTCATTTATGCTTTTGATTCTTTTTTGTTCATGAACCTCGGTGTCGGATTTGACAATGGGCAAATGAAGGGTAAACTATGCATTTTAACAAAATAATTATGCTTTTTCCTACTTTTCATGGTACAAATGACCAAAAACCTTCAATAGTTCTGACTTCAAATTCATGTTAATCTGTCATTTACTTATTTCAATAGTCTGCTACTCACTAGTTTGTAGAGGACGTGAAATGGAAGTGATTTCTCTAATCCAAACTCATCCTTGTAGACATTCAATGAGGTACAAAGGCTCCTCAGCAAAACGAACGGAAAGGTGATCGGCGATTTGATGACACCGGCACCTCTTGTCGTTCGAGAAACCACCAATCTTGAGGATGCTGCTAGGTTTTTACATGCTTGTCTCTTCCCGTGTATCTTCCAACTGTTTTCTGGTGTCAGAATTTTGAAGCATTCCTTTCTGTTTACCAAATGCAGATTATTGCTTAAGACAAAGTATCGCCGGCTACCAGTGGTAGATGCCAAGGGAAAGCTGGTAAGAGATCTATTCTTCTACTGTTCTAATTTGAATGAATGGTTGAGTTGTTGTAGTGTGTAGCGTAAAATGATGAAATCTTTATTAATGAAGGTTGGAATTATTACAAGAGGCAATGTGGTAAGAGCTGCTCTACAAATGAAGCATGCCCAAGAAAACTGAACATCATTTTCTCAAATCTTGCATGCTGTTAGGTTAGCACACAGGATTCTGAAGTGCAATCATACAGTTTTGGCTCATGATTATATGAACATCATCATGATTATATTGTGTTGTAGTTGGTGATTTGAGCAAGCTGTAGAAGTTGGGAATTAGGTATTAGACCAGACTTTTAAAGTGTCAAATAGGCATCAGGCTATTCAATGTTTGTATTTTTCTAGTACTTTTAATGCTCAAGCTTGAAATTAAATCTTTGTATTTAATACAAAATTAAAATTCTAAACATTTATTGCTTTGGGTATGAATTAAACTCTAATGTAATCTAAGGCAGAGTCCGTGAGTAGGTAAAATTTTGAATTATGGT

mRNA sequence

ATGGATTTCACTTCCTTATCGCTTCCGCAATTTAGGGCCAATAGTTTTTCGATTCAGGAGCTGTTGTTTGGTCCTCGTCGGAGGCCTCCATCGCCGATTGTTCATGCATCGGTTTCTCAGAGCTTTCCGGCGTCTTCTCGCTTTCCGGAGCAGCGGAAATCTACTTCTCTTTCCGCTAGCGGCACCTTGATGGCCAATTCCGCGCCGTCGAGAAGTGGTGTATACACAGTTGGTGACTTCATGACTAGGAGAGAGGAGTTGCATGTCGTAAAGCCCACAACCAGTGTCGATGAAGCATTAGAAATTCTGGTGGAAAAAAGGATCACGGGATTTCCAGTAATTGATGACAATTGGAACTTGGTTGGCGTAGTTTCAGACTATGACTTGTTAGCGCTAGACTCCATCTCAGGTGGTGGAAGGACAGATCCAAGTATGTTTCCTGAAGTTGACAGCTCCTGGAAAACATTCAATGAGGTACAAAGGCTCCTCAGCAAAACGAACGGAAAGGTGATCGGCGATTTGATGACACCGGCACCTCTTGTCGTTCGAGAAACCACCAATCTTGAGGATGCTGCTAGATTATTGCTTAAGACAAAGTATCGCCGGCTACCAGTGGTAGATGCCAAGGGAAAGCTGGTTGGAATTATTACAAGAGGCAATGTGGTAAGAGCTGCTCTACAAATGAAGCATGCCCAAGAAAACTGAACATCATTTTCTCAAATCTTGCATGCTGTTAGGTTAGCACACAGGATTCTGAAGTGCAATCATACAGTTTTGGCTCATGATTATATGAACATCATCATGATTATATTGTGTTGTAGTTGGTGATTTGAGCAAGCTGTAGAAGTTGGGAATTAGGTATTAGACCAGACTTTTAAAGTGTCAAATAGGCATCAGGCTATTCAATGTTTGTATTTTTCTAGTACTTTTAATGCTCAAGCTTGAAATTAAATCTTTGTATTTAATACAAAATTAAAATTCTAAACATTTATTGCTTTGGGTATGAATTAAACTCTAATGTAATCTAAGGCAGAGTCCGTGAGTAGGTAAAATTTTGAATTATGGT

Coding sequence (CDS)

ATGGATTTCACTTCCTTATCGCTTCCGCAATTTAGGGCCAATAGTTTTTCGATTCAGGAGCTGTTGTTTGGTCCTCGTCGGAGGCCTCCATCGCCGATTGTTCATGCATCGGTTTCTCAGAGCTTTCCGGCGTCTTCTCGCTTTCCGGAGCAGCGGAAATCTACTTCTCTTTCCGCTAGCGGCACCTTGATGGCCAATTCCGCGCCGTCGAGAAGTGGTGTATACACAGTTGGTGACTTCATGACTAGGAGAGAGGAGTTGCATGTCGTAAAGCCCACAACCAGTGTCGATGAAGCATTAGAAATTCTGGTGGAAAAAAGGATCACGGGATTTCCAGTAATTGATGACAATTGGAACTTGGTTGGCGTAGTTTCAGACTATGACTTGTTAGCGCTAGACTCCATCTCAGGTGGTGGAAGGACAGATCCAAGTATGTTTCCTGAAGTTGACAGCTCCTGGAAAACATTCAATGAGGTACAAAGGCTCCTCAGCAAAACGAACGGAAAGGTGATCGGCGATTTGATGACACCGGCACCTCTTGTCGTTCGAGAAACCACCAATCTTGAGGATGCTGCTAGATTATTGCTTAAGACAAAGTATCGCCGGCTACCAGTGGTAGATGCCAAGGGAAAGCTGGTTGGAATTATTACAAGAGGCAATGTGGTAAGAGCTGCTCTACAAATGAAGCATGCCCAAGAAAACTGA

Protein sequence

MDFTSLSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGTLMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGVVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVRETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN
BLAST of Cp4.1LG16g01220 vs. Swiss-Prot
Match: CBSX1_ARATH (CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana GN=CBSX1 PE=1 SV=2)

HSP 1 Score: 297.0 bits (759), Expect = 1.8e-79
Identity = 156/226 (69.03%), Postives = 182/226 (80.53%), Query Frame = 1

Query: 6   LSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGTLMA 65
           LS    RA+S      L  PR     P    + S+SFP+ SR P    S S +A  TLM 
Sbjct: 10  LSFTPLRASSSPSSPYLLLPRFLSVQPCHKFTFSRSFPSKSRIP----SASSAAGSTLMT 69

Query: 66  NSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGVVS 125
           NS+  RSGVYTVG+FMT++E+LHVVKPTT+VDEALE+LVE RITGFPVID++W LVG+VS
Sbjct: 70  NSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVS 129

Query: 126 DYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVRET 185
           DYDLLALDSISG GRT+ SMFPEVDS+WKTFN VQ+LLSKTNGK++GDLMTPAPLVV E 
Sbjct: 130 DYDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEK 189

Query: 186 TNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHA 232
           TNLEDAA++LL+TKYRRLPVVD+ GKLVGIITRGNVVRAALQ+K +
Sbjct: 190 TNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRS 231

BLAST of Cp4.1LG16g01220 vs. Swiss-Prot
Match: CBSX2_ARATH (CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana GN=CBSX2 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.2e-70
Identity = 141/221 (63.80%), Postives = 175/221 (79.19%), Query Frame = 1

Query: 32  PIVHASVSQSF-PASSR------FPEQRKSTSLSASGTLMA-----------NSAPSRSG 91
           P++ +   QSF P SS          +R+S++ S S T+ A           NS P+++G
Sbjct: 16  PLLTSLYHQSFLPISSSSFSLLPLSNRRRSSTFSPSITVSAFFAAPASVNNNNSVPAKNG 75

Query: 92  VYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGVVSDYDLLALD 151
            YTVGDFMT R+ LHVVKP+TSVD+ALE+LVEK++TG PVIDDNW LVGVVSDYDLLALD
Sbjct: 76  GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALD 135

Query: 152 SISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVRETTNLEDAAR 211
           SISG  + D ++FP+VDS+WKTFNE+Q+L+SKT GKV+GDLMTP+PLVVR++TNLEDAAR
Sbjct: 136 SISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAAR 195

Query: 212 LLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 235
           LLL+TK+RRLPVVDA GKL+GI+TRGNVVRAALQ+K   EN
Sbjct: 196 LLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRETEN 236

BLAST of Cp4.1LG16g01220 vs. Swiss-Prot
Match: Y1426_METJA (Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1426 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.8e-10
Identity = 38/143 (26.57%), Postives = 77/143 (53.85%), Query Frame = 1

Query: 89  VVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGVVSDYDLLA--LDSISGGGRTDPSMF 148
           VV     + + + +  + +I+G PV++ +  LVG++S+ D++   +          PS  
Sbjct: 26  VVYEDNDLIDVIRLFRKNKISGAPVLNKDGKLVGIISESDIVKTIVTHNEDLNLILPSPL 85

Query: 149 PEVDSSWKTFNEVQRLLSKTNGKV---IGDLMTPAPLVVRETTNLEDAARLLLKTKYRRL 208
             ++   KT  +++  +      +   + D+MT   +V +    + DAA+L++K   +RL
Sbjct: 86  DLIELPLKTALKIEEFMEDLKNALKTKVRDVMTRKVIVAKPDMTINDAAKLMVKNNIKRL 145

Query: 209 PVVDAKGKLVGIITRGNVVRAAL 227
           PVVD +G L+GI+TRG+++ A +
Sbjct: 146 PVVDDEGNLIGIVTRGDLIEALI 168

BLAST of Cp4.1LG16g01220 vs. Swiss-Prot
Match: Y8960_DICDI (CBS domain-containing protein DDB_G0289609 OS=Dictyostelium discoideum GN=DDB_G0289609 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.9e-08
Identity = 40/138 (28.99%), Postives = 69/138 (50.00%), Query Frame = 1

Query: 85  EELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGVVSDYDLLALDSISGGGRTDPS 144
           + L  +   T++D AL+ L    I   PV+D++ NL G+++D DL           TD  
Sbjct: 11  KSLFTINLDTTLDVALKSLNANSIHRLPVVDNDGNLKGIITDRDLRLA--------TDSP 70

Query: 145 MFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVRETTNLEDAARLLLKTKYRRLP 204
             PE        N   RL  K     +  +M   P+ + + + + +AA+L+  T    LP
Sbjct: 71  FLPE--------NNEDRL-EKLRLHKVSSIMKQNPVTIEDFSPVVEAAKLMRVTNVGGLP 130

Query: 205 VVDAKGKLVGIITRGNVV 223
           V+D KG+L+G++TR +++
Sbjct: 131 VLDKKGRLIGMVTRSDLL 131

BLAST of Cp4.1LG16g01220 vs. Swiss-Prot
Match: IMDH_AQUAE (Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain VF5) GN=guaB PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.4e-08
Identity = 40/135 (29.63%), Postives = 67/135 (49.63%), Query Frame = 1

Query: 90  VKPTTSVDEALEILVEKRITGFPVIDDNWNLVGVVSDYDLLALDSISGGGRTDPSMFPEV 149
           VKP T V EAL+I+ + +I+G PV+D+   L+G++++ DL  +              PE 
Sbjct: 103 VKPDTRVKEALDIMAKYKISGVPVVDEERKLIGILTNRDLRFIK-------------PED 162

Query: 150 DSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVR-ETTNLEDAARLLLKTKYRRLPVVDA 209
            S                 K + + MT   L+   E   L++A  +  K K  +LP+VD 
Sbjct: 163 YS-----------------KPVSEFMTKENLITAPEGITLDEAEEIFRKYKIEKLPIVDK 207

Query: 210 KGKLVGIITRGNVVR 224
           +GK+ G+IT  ++V+
Sbjct: 223 EGKIKGLITIKDIVK 207

BLAST of Cp4.1LG16g01220 vs. TrEMBL
Match: A0A0A0LSY7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G152500 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 5.9e-101
Identity = 195/231 (84.42%), Postives = 209/231 (90.48%), Query Frame = 1

Query: 4   TSLSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGTL 63
           +SLSL  FRA SFS+QE+LFGP RRP  PI+HASV+QSFP      E RKSTS++ASGTL
Sbjct: 9   SSLSLAPFRAKSFSVQEMLFGPCRRPSLPILHASVAQSFP------ELRKSTSIAASGTL 68

Query: 64  MANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGV 123
           MANS PS +GVY VGDFMTR+EELHVVKPTTSVDEALEILVEKRITGFPVIDDNW LVGV
Sbjct: 69  MANSVPSGTGVYIVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVIDDNWKLVGV 128

Query: 124 VSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVR 183
           VSDYDLLALDSISGGGRTD SMFPEVDSSWKTFNEVQRLLSKTNGKV+GDLMT APLVVR
Sbjct: 129 VSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMTTAPLVVR 188

Query: 184 ETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 235
           E T+LED ARLLL+TKYRRLPVVDA GKLVGIITRGNVVRAALQ+KHA+EN
Sbjct: 189 EITDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEEN 233

BLAST of Cp4.1LG16g01220 vs. TrEMBL
Match: F6H4H6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00200 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 8.9e-81
Identity = 162/213 (76.06%), Postives = 185/213 (86.85%), Query Frame = 1

Query: 21  LLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGTLMANSAPSRSGVYTVGDF 80
           LLF P R+PP   V ++V      S R    R+S +L+A+GTLMANS PS++GVYTVGDF
Sbjct: 38  LLFQPGRKPP---VGSTVGSR---SERISGIRRSPALAAAGTLMANSVPSKNGVYTVGDF 97

Query: 81  MTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGVVSDYDLLALDSISGGGR 140
           MTR+E+LHVVK TT+V+EALEILVE RITGFPVIDD+W LVG+VSDYDLLALDSISGGG 
Sbjct: 98  MTRKEDLHVVKATTTVEEALEILVENRITGFPVIDDDWKLVGLVSDYDLLALDSISGGGL 157

Query: 141 TDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVRETTNLEDAARLLLKTKY 200
           TD  MFPEVDS+WKTFNE+Q+LLSKTNGKV+GDLMTPAP+VVRETTNLEDAARLLL+TKY
Sbjct: 158 TDTIMFPEVDSTWKTFNELQKLLSKTNGKVVGDLMTPAPVVVRETTNLEDAARLLLETKY 217

Query: 201 RRLPVVDAKGKLVGIITRGNVVRAALQMKHAQE 234
           RRLPVVD+ GKLVGIITRGNVVRAALQ+K A E
Sbjct: 218 RRLPVVDSDGKLVGIITRGNVVRAALQIKRAVE 244

BLAST of Cp4.1LG16g01220 vs. TrEMBL
Match: A0A067GUY1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025613mg PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.5e-80
Identity = 157/190 (82.63%), Postives = 173/190 (91.05%), Query Frame = 1

Query: 44  ASSRFPEQRKSTSLSASGTLMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEIL 103
           +S R    R+S+++ ASGTL ANSA   SGVYTVGDFMT +EELHVVKPTT+VDEALEIL
Sbjct: 52  SSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEIL 111

Query: 104 VEKRITGFPVIDDNWNLVGVVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLL 163
           VEKRITGFPVIDD+W LVG+VSDYDLLALDSISG GR D SMFPEVDS+WKTFNEVQ+LL
Sbjct: 112 VEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLL 171

Query: 164 SKTNGKVIGDLMTPAPLVVRETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVR 223
           SKTNGK++GDLMTPAP+VVRETTNLEDAARLLL+TKYRRLPVVDA GKLVGIITRGNVVR
Sbjct: 172 SKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231

Query: 224 AALQMKHAQE 234
           AALQ+KHA E
Sbjct: 232 AALQIKHATE 241

BLAST of Cp4.1LG16g01220 vs. TrEMBL
Match: V4UIP6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026357mg PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 3.4e-80
Identity = 157/190 (82.63%), Postives = 172/190 (90.53%), Query Frame = 1

Query: 44  ASSRFPEQRKSTSLSASGTLMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEIL 103
           +S R    R+S+ + ASGTL ANSA   SGVYTVGDFMT +EELHVVKPTT+VDEALEIL
Sbjct: 52  SSDRVSALRRSSVVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEIL 111

Query: 104 VEKRITGFPVIDDNWNLVGVVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLL 163
           VEKRITGFPVIDD+W LVG+VSDYDLLALDSISG GR D SMFPEVDS+WKTFNEVQ+LL
Sbjct: 112 VEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLL 171

Query: 164 SKTNGKVIGDLMTPAPLVVRETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVR 223
           SKTNGK++GDLMTPAP+VVRETTNLEDAARLLL+TKYRRLPVVDA GKLVGIITRGNVVR
Sbjct: 172 SKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231

Query: 224 AALQMKHAQE 234
           AALQ+KHA E
Sbjct: 232 AALQIKHATE 241

BLAST of Cp4.1LG16g01220 vs. TrEMBL
Match: A0A067GUL0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025613mg PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.1e-78
Identity = 157/195 (80.51%), Postives = 173/195 (88.72%), Query Frame = 1

Query: 44  ASSRFPEQRKSTSLSASGTLMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEA---- 103
           +S R    R+S+++ ASGTL ANSA   SGVYTVGDFMT +EELHVVKPTT+VDEA    
Sbjct: 52  SSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPT 111

Query: 104 -LEILVEKRITGFPVIDDNWNLVGVVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNE 163
            LEILVEKRITGFPVIDD+W LVG+VSDYDLLALDSISG GR D SMFPEVDS+WKTFNE
Sbjct: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171

Query: 164 VQRLLSKTNGKVIGDLMTPAPLVVRETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITR 223
           VQ+LLSKTNGK++GDLMTPAP+VVRETTNLEDAARLLL+TKYRRLPVVDA GKLVGIITR
Sbjct: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231

Query: 224 GNVVRAALQMKHAQE 234
           GNVVRAALQ+KHA E
Sbjct: 232 GNVVRAALQIKHATE 246

BLAST of Cp4.1LG16g01220 vs. TAIR10
Match: AT4G36910.1 (AT4G36910.1 Cystathionine beta-synthase (CBS) family protein)

HSP 1 Score: 297.0 bits (759), Expect = 1.0e-80
Identity = 156/226 (69.03%), Postives = 182/226 (80.53%), Query Frame = 1

Query: 6   LSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGTLMA 65
           LS    RA+S      L  PR     P    + S+SFP+ SR P    S S +A  TLM 
Sbjct: 10  LSFTPLRASSSPSSPYLLLPRFLSVQPCHKFTFSRSFPSKSRIP----SASSAAGSTLMT 69

Query: 66  NSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGVVS 125
           NS+  RSGVYTVG+FMT++E+LHVVKPTT+VDEALE+LVE RITGFPVID++W LVG+VS
Sbjct: 70  NSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVS 129

Query: 126 DYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVRET 185
           DYDLLALDSISG GRT+ SMFPEVDS+WKTFN VQ+LLSKTNGK++GDLMTPAPLVV E 
Sbjct: 130 DYDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEK 189

Query: 186 TNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHA 232
           TNLEDAA++LL+TKYRRLPVVD+ GKLVGIITRGNVVRAALQ+K +
Sbjct: 190 TNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRS 231

BLAST of Cp4.1LG16g01220 vs. TAIR10
Match: AT4G34120.1 (AT4G34120.1 Cystathionine beta-synthase (CBS) family protein)

HSP 1 Score: 267.7 bits (683), Expect = 6.7e-72
Identity = 141/221 (63.80%), Postives = 175/221 (79.19%), Query Frame = 1

Query: 32  PIVHASVSQSF-PASSR------FPEQRKSTSLSASGTLMA-----------NSAPSRSG 91
           P++ +   QSF P SS          +R+S++ S S T+ A           NS P+++G
Sbjct: 16  PLLTSLYHQSFLPISSSSFSLLPLSNRRRSSTFSPSITVSAFFAAPASVNNNNSVPAKNG 75

Query: 92  VYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGVVSDYDLLALD 151
            YTVGDFMT R+ LHVVKP+TSVD+ALE+LVEK++TG PVIDDNW LVGVVSDYDLLALD
Sbjct: 76  GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALD 135

Query: 152 SISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVRETTNLEDAAR 211
           SISG  + D ++FP+VDS+WKTFNE+Q+L+SKT GKV+GDLMTP+PLVVR++TNLEDAAR
Sbjct: 136 SISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAAR 195

Query: 212 LLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 235
           LLL+TK+RRLPVVDA GKL+GI+TRGNVVRAALQ+K   EN
Sbjct: 196 LLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRETEN 236

BLAST of Cp4.1LG16g01220 vs. NCBI nr
Match: gi|449443418|ref|XP_004139474.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 375.2 bits (962), Expect = 8.5e-101
Identity = 195/231 (84.42%), Postives = 209/231 (90.48%), Query Frame = 1

Query: 4   TSLSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGTL 63
           +SLSL  FRA SFS+QE+LFGP RRP  PI+HASV+QSFP      E RKSTS++ASGTL
Sbjct: 9   SSLSLAPFRAKSFSVQEMLFGPCRRPSLPILHASVAQSFP------ELRKSTSIAASGTL 68

Query: 64  MANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGV 123
           MANS PS +GVY VGDFMTR+EELHVVKPTTSVDEALEILVEKRITGFPVIDDNW LVGV
Sbjct: 69  MANSVPSGTGVYIVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVIDDNWKLVGV 128

Query: 124 VSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVR 183
           VSDYDLLALDSISGGGRTD SMFPEVDSSWKTFNEVQRLLSKTNGKV+GDLMT APLVVR
Sbjct: 129 VSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMTTAPLVVR 188

Query: 184 ETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 235
           E T+LED ARLLL+TKYRRLPVVDA GKLVGIITRGNVVRAALQ+KHA+EN
Sbjct: 189 EITDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEEN 233

BLAST of Cp4.1LG16g01220 vs. NCBI nr
Match: gi|659071762|ref|XP_008461810.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 372.5 bits (955), Expect = 5.5e-100
Identity = 195/231 (84.42%), Postives = 208/231 (90.04%), Query Frame = 1

Query: 4   TSLSLPQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGTL 63
           +SLSL   RA SFS+QE+LFGP RR   PI+HASV+QSFP      E RKSTSL+ASGTL
Sbjct: 9   SSLSLAHLRAKSFSVQEMLFGPCRRLSLPILHASVAQSFP------ELRKSTSLAASGTL 68

Query: 64  MANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGV 123
           MANS PS +GVYTVGDFMTR+EELHVVKPTTSVDEALEILVEKRITGFPVIDDNW LVGV
Sbjct: 69  MANSVPSGTGVYTVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVIDDNWKLVGV 128

Query: 124 VSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVR 183
           VSDYDLLALDSISGGGRTD SMFPEVDSSWKTFNEVQRLLSKTNGKV+GDLMT APLVVR
Sbjct: 129 VSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMTTAPLVVR 188

Query: 184 ETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 235
           E T+LED ARLLL+TKYRRLPVVDA GKLVGIITRGNVVRAALQ+KHA+EN
Sbjct: 189 EITDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEEN 233

BLAST of Cp4.1LG16g01220 vs. NCBI nr
Match: gi|225438783|ref|XP_002283079.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic [Vitis vinifera])

HSP 1 Score: 308.1 bits (788), Expect = 1.3e-80
Identity = 162/213 (76.06%), Postives = 185/213 (86.85%), Query Frame = 1

Query: 21  LLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKSTSLSASGTLMANSAPSRSGVYTVGDF 80
           LLF P R+PP   V ++V      S R    R+S +L+A+GTLMANS PS++GVYTVGDF
Sbjct: 38  LLFQPGRKPP---VGSTVGSR---SERISGIRRSPALAAAGTLMANSVPSKNGVYTVGDF 97

Query: 81  MTRREELHVVKPTTSVDEALEILVEKRITGFPVIDDNWNLVGVVSDYDLLALDSISGGGR 140
           MTR+E+LHVVK TT+V+EALEILVE RITGFPVIDD+W LVG+VSDYDLLALDSISGGG 
Sbjct: 98  MTRKEDLHVVKATTTVEEALEILVENRITGFPVIDDDWKLVGLVSDYDLLALDSISGGGL 157

Query: 141 TDPSMFPEVDSSWKTFNEVQRLLSKTNGKVIGDLMTPAPLVVRETTNLEDAARLLLKTKY 200
           TD  MFPEVDS+WKTFNE+Q+LLSKTNGKV+GDLMTPAP+VVRETTNLEDAARLLL+TKY
Sbjct: 158 TDTIMFPEVDSTWKTFNELQKLLSKTNGKVVGDLMTPAPVVVRETTNLEDAARLLLETKY 217

Query: 201 RRLPVVDAKGKLVGIITRGNVVRAALQMKHAQE 234
           RRLPVVD+ GKLVGIITRGNVVRAALQ+K A E
Sbjct: 218 RRLPVVDSDGKLVGIITRGNVVRAALQIKRAVE 244

BLAST of Cp4.1LG16g01220 vs. NCBI nr
Match: gi|641860427|gb|KDO79116.1| (hypothetical protein CISIN_1g025613mg [Citrus sinensis])

HSP 1 Score: 307.4 bits (786), Expect = 2.2e-80
Identity = 157/190 (82.63%), Postives = 173/190 (91.05%), Query Frame = 1

Query: 44  ASSRFPEQRKSTSLSASGTLMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEIL 103
           +S R    R+S+++ ASGTL ANSA   SGVYTVGDFMT +EELHVVKPTT+VDEALEIL
Sbjct: 52  SSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEIL 111

Query: 104 VEKRITGFPVIDDNWNLVGVVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLL 163
           VEKRITGFPVIDD+W LVG+VSDYDLLALDSISG GR D SMFPEVDS+WKTFNEVQ+LL
Sbjct: 112 VEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLL 171

Query: 164 SKTNGKVIGDLMTPAPLVVRETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVR 223
           SKTNGK++GDLMTPAP+VVRETTNLEDAARLLL+TKYRRLPVVDA GKLVGIITRGNVVR
Sbjct: 172 SKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231

Query: 224 AALQMKHAQE 234
           AALQ+KHA E
Sbjct: 232 AALQIKHATE 241

BLAST of Cp4.1LG16g01220 vs. NCBI nr
Match: gi|568883420|ref|XP_006494468.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic isoform X1 [Citrus sinensis])

HSP 1 Score: 307.4 bits (786), Expect = 2.2e-80
Identity = 157/190 (82.63%), Postives = 173/190 (91.05%), Query Frame = 1

Query: 44  ASSRFPEQRKSTSLSASGTLMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEIL 103
           +S R    R+S+++ ASGTL ANSA   SGVYTVGDFMT +EELHVVKPTT+VDEALEIL
Sbjct: 52  SSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEIL 111

Query: 104 VEKRITGFPVIDDNWNLVGVVSDYDLLALDSISGGGRTDPSMFPEVDSSWKTFNEVQRLL 163
           VEKRITGFPVIDD+W LVG+VSDYDLLALDSISG GR D SMFPEVDS+WKTFNEVQ+LL
Sbjct: 112 VEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLL 171

Query: 164 SKTNGKVIGDLMTPAPLVVRETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVR 223
           SKTNGK++GDLMTPAP+VVRETTNLEDAARLLL+TKYRRLPVVDA GKLVGIITRGNVVR
Sbjct: 172 SKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 231

Query: 224 AALQMKHAQE 234
           AALQ+KHA E
Sbjct: 232 AALQIKHATE 241

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CBSX1_ARATH1.8e-7969.03CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana GN=CB... [more]
CBSX2_ARATH1.2e-7063.80CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana GN=CB... [more]
Y1426_METJA1.8e-1026.57Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 430... [more]
Y8960_DICDI2.9e-0828.99CBS domain-containing protein DDB_G0289609 OS=Dictyostelium discoideum GN=DDB_G0... [more]
IMDH_AQUAE8.4e-0829.63Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain VF5) GN=guaB ... [more]
Match NameE-valueIdentityDescription
A0A0A0LSY7_CUCSA5.9e-10184.42Uncharacterized protein OS=Cucumis sativus GN=Csa_1G152500 PE=4 SV=1[more]
F6H4H6_VITVI8.9e-8176.06Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00200 PE=4 SV=... [more]
A0A067GUY1_CITSI1.5e-8082.63Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025613mg PE=4 SV=1[more]
V4UIP6_9ROSI3.4e-8082.63Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026357mg PE=4 SV=1[more]
A0A067GUL0_CITSI1.1e-7880.51Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025613mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G36910.11.0e-8069.03 Cystathionine beta-synthase (CBS) family protein[more]
AT4G34120.16.7e-7263.80 Cystathionine beta-synthase (CBS) family protein[more]
Match NameE-valueIdentityDescription
gi|449443418|ref|XP_004139474.1|8.5e-10184.42PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis sati... [more]
gi|659071762|ref|XP_008461810.1|5.5e-10084.42PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis melo... [more]
gi|225438783|ref|XP_002283079.1|1.3e-8076.06PREDICTED: CBS domain-containing protein CBSX1, chloroplastic [Vitis vinifera][more]
gi|641860427|gb|KDO79116.1|2.2e-8082.63hypothetical protein CISIN_1g025613mg [Citrus sinensis][more]
gi|568883420|ref|XP_006494468.1|2.2e-8082.63PREDICTED: CBS domain-containing protein CBSX1, chloroplastic isoform X1 [Citrus... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000644CBS_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
cellular_component GO:0005623 cell
cellular_component GO:0009507 chloroplast
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG16g01220.1Cp4.1LG16g01220.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000644CBS domainPFAMPF00571CBScoord: 77..131
score: 9.1E-14coord: 171..224
score: 5.9
IPR000644CBS domainSMARTSM00116cbs_1coord: 86..134
score: 3.2E-6coord: 178..226
score: 6.8
IPR000644CBS domainPROFILEPS51371CBScoord: 175..233
score: 15.025coord: 81..144
score:
NoneNo IPR availableGENE3DG3DSA:3.10.580.10coord: 74..231
score: 4.8
NoneNo IPR availablePANTHERPTHR11911INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATEDcoord: 63..233
score: 3.1E
NoneNo IPR availablePANTHERPTHR11911:SF109SUBFAMILY NOT NAMEDcoord: 63..233
score: 3.1E
NoneNo IPR availableunknownSSF54631CBS-domain paircoord: 72..224
score: 1.3

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG16g01220CmaCh20G010000Cucurbita maxima (Rimu)cmacpeB565
Cp4.1LG16g01220CmaCh02G005240Cucurbita maxima (Rimu)cmacpeB626
Cp4.1LG16g01220CmoCh20G010160Cucurbita moschata (Rifu)cmocpeB517
Cp4.1LG16g01220CmoCh02G005360Cucurbita moschata (Rifu)cmocpeB575
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG16g01220Cp4.1LG05g11560Cucurbita pepo (Zucchini)cpecpeB309