Cp4.1LG16g00560 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGTTTGCGCTTCGACGCACACAGCAACGATATCAGCGAATCCGAAGCGCGGAATGAGACTGCATCAACAGCAACAACCAAATCTGGATTCGATCAAGGTGATTCACATGGACGGCTTCATCCAGGAGTTTTCCGATCCAATCAAAGCCTCCAAAATCACATCTCACAACCCTAACTTCCTCCTCTGCAACTCCGACGAAATGTTCATCGGCAGCCGCGTCCCCTCCCTCTCCCCCGACGAAAACCTCCAACTCGGCCAAATCTACTTCCTCCTCCCGCTCTCCCTCGCACAATCGCCTCTCTCCCTCCCCGATCTCTGCAATTTCGCCATTAAGGCCTCCTCTGCTCTTCCCACGCTTCAATCTCCCTGCTTCAGGTAG ATGGGGGTTTGCGCTTCGACGCACACAGCAACGATATCAGCGAATCCGAAGCGCGGAATGAGACTGCATCAACAGCAACAACCAAATCTGGATTCGATCAAGGTGATTCACATGGACGGCTTCATCCAGGAGTTTTCCGATCCAATCAAAGCCTCCAAAATCACATCTCACAACCCTAACTTCCTCCTCTGCAACTCCGACGAAATGTTCATCGGCAGCCGCGTCCCCTCCCTCTCCCCCGACGAAAACCTCCAACTCGGCCAAATCTACTTCCTCCTCCCGCTCTCCCTCGCACAATCGCCTCTCTCCCTCCCCGATCTCTGCAATTTCGCCATTAAGGCCTCCTCTGCTCTTCCCACGCTTCAATCTCCCTGCTTCAGGTAG ATGGGGGTTTGCGCTTCGACGCACACAGCAACGATATCAGCGAATCCGAAGCGCGGAATGAGACTGCATCAACAGCAACAACCAAATCTGGATTCGATCAAGGTGATTCACATGGACGGCTTCATCCAGGAGTTTTCCGATCCAATCAAAGCCTCCAAAATCACATCTCACAACCCTAACTTCCTCCTCTGCAACTCCGACGAAATGTTCATCGGCAGCCGCGTCCCCTCCCTCTCCCCCGACGAAAACCTCCAACTCGGCCAAATCTACTTCCTCCTCCCGCTCTCCCTCGCACAATCGCCTCTCTCCCTCCCCGATCTCTGCAATTTCGCCATTAAGGCCTCCTCTGCTCTTCCCACGCTTCAATCTCCCTGCTTCAGGTAG MGVCASTHTATISANPKRGMRLHQQQQPNLDSIKVIHMDGFIQEFSDPIKASKITSHNPNFLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQSPLSLPDLCNFAIKASSALPTLQSPCFR
BLAST of Cp4.1LG16g00560 vs. TrEMBL
Match: A0A0A0LJJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287070 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 7.3e-45 Identity = 98/132 (74.24%), Postives = 109/132 (82.58%), Query Frame = 1
BLAST of Cp4.1LG16g00560 vs. TrEMBL
Match: M5WBZ8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023721mg PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 3.0e-22 Identity = 64/118 (54.24%), Postives = 74/118 (62.71%), Query Frame = 1
BLAST of Cp4.1LG16g00560 vs. TrEMBL
Match: B9S8S1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0604200 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.1e-21 Identity = 61/125 (48.80%), Postives = 78/125 (62.40%), Query Frame = 1
BLAST of Cp4.1LG16g00560 vs. TrEMBL
Match: W9RBP1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026971 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.9e-21 Identity = 59/118 (50.00%), Postives = 78/118 (66.10%), Query Frame = 1
BLAST of Cp4.1LG16g00560 vs. TrEMBL
Match: A0A067EMI2_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g046460mg PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 3.3e-21 Identity = 52/84 (61.90%), Postives = 66/84 (78.57%), Query Frame = 1
BLAST of Cp4.1LG16g00560 vs. TAIR10
Match: AT5G66580.1 (AT5G66580.1 unknown protein) HSP 1 Score: 82.0 bits (201), Expect = 2.9e-16 Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 1
BLAST of Cp4.1LG16g00560 vs. TAIR10
Match: AT4G37240.1 (AT4G37240.1 unknown protein) HSP 1 Score: 78.2 bits (191), Expect = 4.1e-15 Identity = 42/118 (35.59%), Postives = 63/118 (53.39%), Query Frame = 1
BLAST of Cp4.1LG16g00560 vs. TAIR10
Match: AT2G23690.1 (AT2G23690.1 unknown protein) HSP 1 Score: 76.3 bits (186), Expect = 1.6e-14 Identity = 43/127 (33.86%), Postives = 63/127 (49.61%), Query Frame = 1
BLAST of Cp4.1LG16g00560 vs. TAIR10
Match: AT3G50800.1 (AT3G50800.1 unknown protein) HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13 Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 1
BLAST of Cp4.1LG16g00560 vs. TAIR10
Match: AT1G76600.1 (AT1G76600.1 unknown protein) HSP 1 Score: 66.2 bits (160), Expect = 1.6e-11 Identity = 33/95 (34.74%), Postives = 57/95 (60.00%), Query Frame = 1
BLAST of Cp4.1LG16g00560 vs. NCBI nr
Match: gi|700206906|gb|KGN62025.1| (hypothetical protein Csa_2G287070 [Cucumis sativus]) HSP 1 Score: 188.0 bits (476), Expect = 1.0e-44 Identity = 98/132 (74.24%), Postives = 109/132 (82.58%), Query Frame = 1
BLAST of Cp4.1LG16g00560 vs. NCBI nr
Match: gi|645273428|ref|XP_008241872.1| (PREDICTED: uncharacterized protein LOC103340255 [Prunus mume]) HSP 1 Score: 113.2 bits (282), Expect = 3.3e-22 Identity = 65/118 (55.08%), Postives = 74/118 (62.71%), Query Frame = 1
BLAST of Cp4.1LG16g00560 vs. NCBI nr
Match: gi|595810563|ref|XP_007203096.1| (hypothetical protein PRUPE_ppa023721mg [Prunus persica]) HSP 1 Score: 112.8 bits (281), Expect = 4.3e-22 Identity = 64/118 (54.24%), Postives = 74/118 (62.71%), Query Frame = 1
BLAST of Cp4.1LG16g00560 vs. NCBI nr
Match: gi|223538468|gb|EEF40074.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 110.9 bits (276), Expect = 1.6e-21 Identity = 61/125 (48.80%), Postives = 78/125 (62.40%), Query Frame = 1
BLAST of Cp4.1LG16g00560 vs. NCBI nr
Match: gi|703097883|ref|XP_010096234.1| (hypothetical protein L484_026971 [Morus notabilis]) HSP 1 Score: 110.2 bits (274), Expect = 2.8e-21 Identity = 59/118 (50.00%), Postives = 78/118 (66.10%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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