Cp4.1LG16g00430 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG16g00430
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionB3 domain-containing protein family
LocationCp4.1LG16 : 256262 .. 257154 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCTCTTTCGAGTCCGCCACGCCCCATTTCTTCAAGGTCATTCTTCCACAGACCCTCACTCAATCAAAGCTCGTAAGTTCTTCATCTCTTCCACCATAGTTCCATTTGATAATCCGTATTATCAAATGGGGTTTTAAAAATTTGTGTTTTTTTCAGGCTATTCCGCACAAATTCGTTAGAAAACATGGGGAGGCCTTGGAAACTGAAGAGGTGCGTCTTAAGGTAGCGAGTGGGGCAGAATGGAAAGTGGGTTTGACAAAAAACGATGAAAAAATATGGTTTGAAAAAGGATGGGAAGAGTTTGTGAAGTTTTACAGCGTTGAAATTGGTCATTTTTTGACGTTTAGATACGAAGGAAACTCATGCTTCCATGTTGTTATATTCGATAAAACCGCTTCGGAGATTGAGTATCCATTAGGTTGTGGAGGGAAGGTTAAAAAAAGGGAGAGGTTTTCAATTAGTGAGGAAGCCACAAAGTTCCAATCTTTAACGATGAATCCTTCATTTATGGTAACAATGGGAGCTTCGTATCTTCATACAGGGAAGAGCTATCTGGTAATGATCTTATTATATGTTGTTTGTTGTTATGAGATTGTTGGTTTGATTGAATTTGGGTGTTGTTGTAGAGTATTCCACAATGGTTTGCAAATGCCCACATGGAGAGTCCGAAGGAGATGAGTGTTGAAGTGTCGGATGGAAGGGTTTGGAAGATCTTGTGCGGTGAAAGGTGGCCTCATGGTGTGAAGAGGGTGGAAATGAGAGGGGGTTGGAGGGATTTTGCGAGAGATAATGGGTTGAAAAAGGGTGATATTTGTGTGTTTGAGTTGATGGAAACCAGTGAGCTATCGTTTAAAGCTACCATTTTTAGATCGGGGTGTCGAGGTTGA

mRNA sequence

ATGGCTTCCTCTTTCGAGTCCGCCACGCCCCATTTCTTCAAGGTCATTCTTCCACAGACCCTCACTCAATCAAAGCTCGCTATTCCGCACAAATTCGTTAGAAAACATGGGGAGGCCTTGGAAACTGAAGAGGTGCGTCTTAAGGTAGCGAGTGGGGCAGAATGGAAAGTGGGTTTGACAAAAAACGATGAAAAAATATGGTTTGAAAAAGGATGGGAAGAGTTTGTGAAGTTTTACAGCGTTGAAATTGGTCATTTTTTGACGTTTAGATACGAAGGAAACTCATGCTTCCATGTTGTTATATTCGATAAAACCGCTTCGGAGATTGAGTATCCATTAGGTTGTGGAGGGAAGGTTAAAAAAAGGGAGAGGTTTTCAATTAGTGAGGAAGCCACAAAGTTCCAATCTTTAACGATGAATCCTTCATTTATGGTAACAATGGGAGCTTCGTATCTTCATACAGGGAAGAGCTATCTGAGTATTCCACAATGGTTTGCAAATGCCCACATGGAGAGTCCGAAGGAGATGAGTGTTGAAGTGTCGGATGGAAGGGTTTGGAAGATCTTGTGCGGTGAAAGGTGGCCTCATGGTGTGAAGAGGGTGGAAATGAGAGGGGGTTGGAGGGATTTTGCGAGAGATAATGGGTTGAAAAAGGGTGATATTTGTGTGTTTGAGTTGATGGAAACCAGTGAGCTATCGTTTAAAGCTACCATTTTTAGATCGGGGTGTCGAGGTTGA

Coding sequence (CDS)

ATGGCTTCCTCTTTCGAGTCCGCCACGCCCCATTTCTTCAAGGTCATTCTTCCACAGACCCTCACTCAATCAAAGCTCGCTATTCCGCACAAATTCGTTAGAAAACATGGGGAGGCCTTGGAAACTGAAGAGGTGCGTCTTAAGGTAGCGAGTGGGGCAGAATGGAAAGTGGGTTTGACAAAAAACGATGAAAAAATATGGTTTGAAAAAGGATGGGAAGAGTTTGTGAAGTTTTACAGCGTTGAAATTGGTCATTTTTTGACGTTTAGATACGAAGGAAACTCATGCTTCCATGTTGTTATATTCGATAAAACCGCTTCGGAGATTGAGTATCCATTAGGTTGTGGAGGGAAGGTTAAAAAAAGGGAGAGGTTTTCAATTAGTGAGGAAGCCACAAAGTTCCAATCTTTAACGATGAATCCTTCATTTATGGTAACAATGGGAGCTTCGTATCTTCATACAGGGAAGAGCTATCTGAGTATTCCACAATGGTTTGCAAATGCCCACATGGAGAGTCCGAAGGAGATGAGTGTTGAAGTGTCGGATGGAAGGGTTTGGAAGATCTTGTGCGGTGAAAGGTGGCCTCATGGTGTGAAGAGGGTGGAAATGAGAGGGGGTTGGAGGGATTTTGCGAGAGATAATGGGTTGAAAAAGGGTGATATTTGTGTGTTTGAGTTGATGGAAACCAGTGAGCTATCGTTTAAAGCTACCATTTTTAGATCGGGGTGTCGAGGTTGA

Protein sequence

MASSFESATPHFFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEKIWFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYPLGCGGKVKKRERFSISEEATKFQSLTMNPSFMVTMGASYLHTGKSYLSIPQWFANAHMESPKEMSVEVSDGRVWKILCGERWPHGVKRVEMRGGWRDFARDNGLKKGDICVFELMETSELSFKATIFRSGCRG
Homology
[Close]
BLAST of Cp4.1LG16g00430 vs. Swiss-Prot
Match: Y3123_ORYSJ (B3 domain-containing protein Os03g0212300 OS=Oryza sativa subsp. japonica GN=Os03g0212300 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 6.3e-22
Identity = 70/234 (29.91%), Postives = 109/234 (46.58%), Query Frame = 1 

Query: 12  FFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAE--WKVGLTKNDEK--IW 71
           FF++ILP + +++KL +P+KF R+ G+  E  E RL+VA      W V +  +D    ++
Sbjct: 15  FFRIILPGS-SKTKLKLPYKFARELGDR-ELREARLRVAGEGRRPWDVKVFDDDVSGDVY 74

Query: 72  FEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYPLGCGGKVKKRERFSI 131
             +GW+EF + + +  GHFL FRY+G + F V +FD+T    +Y              S 
Sbjct: 75  LGRGWQEFARAHDLRDGHFLVFRYDGAAAFTVTVFDETMCRRDYRRHHDAAESGSSSSSD 134

Query: 132 SEEATKFQSLTMN--------PSFMVTMGASYLHTGKS-YLSIPQWFANAHMESPKEMSV 191
           S +A    +              F VT+    L   ++ YL++P  F  AH  + +E  V
Sbjct: 135 SSDAAAAVATAAAEGVGDVALSQFAVTLRQCNLEDKQAQYLNVPMEFQEAHEYARREKVV 194

Query: 192 EVSDGRVWKILCGERWPHGVKRVEMRGGWRDFARDNGLKKGDICVFELMETSEL 233
               G  W +          +R   R GW  F  DNGL  GD C F ++   +L
Sbjct: 195 LRMRGEAWTVRLKHSRRERGQRTAFRYGWHRFCVDNGLAVGDTCFFRVLREGDL 246

[Close]
BLAST of Cp4.1LG16g00430 vs. Swiss-Prot
Match: VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.3e-21
Identity = 51/102 (50.00%), Postives = 64/102 (62.75%), Query Frame = 1 

Query: 10  PHFFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEKIWFE 69
           P F K+I   T+ + +L +P KFV K  + L    V L V  G  W+VGL K D KIWF+
Sbjct: 4   PFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVA-VALTVPDGHVWRVGLRKADNKIWFQ 63

Query: 70  KGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEY 112
            GW+EFV  YS+ IG+ L FRYEGNS F V IF+ + SEI Y
Sbjct: 64  DGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINY 104

[Close]
BLAST of Cp4.1LG16g00430 vs. Swiss-Prot
Match: Y1475_ARATH (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana GN=At1g49475 PE=2 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 8.5e-19
Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = 1 

Query: 6   ESATPHFFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEK 65
           E     F K+IL   + +  + +P +FVR  G  L T+ V L+   G +  + + +  ++
Sbjct: 28  EPTVKKFIKIILLSRIIEKMMKVPARFVR-FGPKL-TDNVTLQTPVGFKRSIRIKRIGDE 87

Query: 66  IWFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYPL 114
           +WFEKGW EF + +S+  GHFL F YEG+SCF VVIFD +ASEIEYPL
Sbjct: 88  VWFEKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPL 133

[Close]
BLAST of Cp4.1LG16g00430 vs. Swiss-Prot
Match: Y3896_ARATH (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana GN=At3g18960 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.1e-18
Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = 1 

Query: 6   ESATPHFFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEK 65
           ES    FFK++LP T+    + IP +FV+  G  L +E V L+  +G +  + L +  E+
Sbjct: 24  ESPVKKFFKLVLPSTMKDKMMKIPPRFVKLQGSKL-SEVVTLETPAGFKRSIKLKRIGEE 83

Query: 66  IWFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYPL 114
           IWF +GW EF + +S+E GHFL F Y+ NS F V+IF+ +A E +YPL
Sbjct: 84  IWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPL 130

[Close]
BLAST of Cp4.1LG16g00430 vs. Swiss-Prot
Match: Y4158_ARATH (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana GN=At4g01580 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.5e-18
Identity = 46/108 (42.59%), Postives = 66/108 (61.11%), Query Frame = 1 

Query: 6   ESATPHFFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEK 65
           ES    FFK++LP T+    + IP +FV+  G  L +E V L   +G +  + L +  E+
Sbjct: 24  ESPVKKFFKLVLPSTMKDKMMRIPPRFVKLQGSKL-SEVVTLVTPAGYKRSIKLKRIGEE 83

Query: 66  IWFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYPL 114
           IWF +GW EF + +S+E GHFL F Y+ NS F V+IF+ +A E  YPL
Sbjct: 84  IWFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPL 130

[Close]
BLAST of Cp4.1LG16g00430 vs. TrEMBL
Match: A0A059B061_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01965 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.0e-39
Identity = 102/265 (38.49%), Postives = 149/265 (56.23%), Query Frame = 1 

Query: 5   FESATPHFFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDE 64
           FES TPHFFK++L   L   +L IP KFVRK+G +L ++ V L +ASG  W+V L + ++
Sbjct: 7   FESQTPHFFKIVLSDALQNGRLGIPKKFVRKYGSSL-SDLVFLHLASGDVWEVELLRGND 66

Query: 65  KIWFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYPLGCGGKVKK--- 124
             +  +GW +FVK Y++E GHFL FRYEG S F VVIFDK+A+EI+YPL       +   
Sbjct: 67  GAFLRRGWPDFVKHYAIEHGHFLVFRYEGGSAFRVVIFDKSATEIKYPLVSENDDPRMEE 126

Query: 125 -----------------RERFSISEEATKFQSLTMNPSFMVTMGASYLHTGKSYLSIPQW 184
                             E+    E AT FQS   NP F+  M  S++   +  LS P  
Sbjct: 127 DVGDASVEVFEDHSDQVSEKSEALERATSFQS--PNPFFLAIMQPSFI---RHCLSAPAR 186

Query: 185 FANAHM---ESPKEMSVEVSDGRVWKILCGERWPHGV----KRVEMRGGWRDFARDNGLK 242
           F   ++    S  ++ + VSD R W +    R+  G+    ++++   GW+ F +DN LK
Sbjct: 187 FFMKYIPNFRSKGDIILYVSDERFWSV----RYKFGIYGRRRQIKFNCGWKRFVQDNNLK 246

[Close]
BLAST of Cp4.1LG16g00430 vs. TrEMBL
Match: A0A058ZRB6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L02216 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 9.1e-36
Identity = 96/249 (38.55%), Postives = 134/249 (53.82%), Query Frame = 1 

Query: 5   FESATPHFFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDE 64
           FES TPHFFK+IL   L   +L IP KFVRK+G  L ++ V L+V SG  W+V L +  +
Sbjct: 7   FESQTPHFFKIILSDALQNGRLGIPKKFVRKYGSNL-SDLVFLQVPSGQAWEVELVRRTD 66

Query: 65  KIWFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYPLGCGGKVKKR-- 124
            +W  +GW +FVK Y+++ GHFL FRYEG S F VVIFDK+ASEI+YP+    ++ KR  
Sbjct: 67  GVWLRRGWPDFVKHYAIKHGHFLVFRYEGGSAFRVVIFDKSASEIKYPIIT--ELPKREE 126

Query: 125 -------ERFSISEEATKFQSLTMNPSFMVTMGASYLHTGKSYLSIPQWFANAHMESPKE 184
                  E+    + A  FQS   NP F+  M  S +       S+  W A         
Sbjct: 127 NEGDTGGEKSEALKRAASFQS--SNPFFLTLMQPSLI-----CHSLRFWLA--------- 186

Query: 185 MSVEVSDGRVWKILCGERWPHGV----KRVEMRGGWRDFARDNGLKKGDICVFELMETSE 241
                            R+  G+     +V++  GW+ F +DN LK GDIC+FEL+++  
Sbjct: 187 -----------------RYKFGIYGRKTQVKINSGWKLFVQDNNLKVGDICIFELLDSDL 219

[Close]
BLAST of Cp4.1LG16g00430 vs. TrEMBL
Match: A0A0D2TIU7_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_007G209200 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.7e-35
Identity = 94/260 (36.15%), Postives = 137/260 (52.69%), Query Frame = 1 

Query: 11  HFFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEKIWFEK 70
           HFFKVIL  T+   KL IPHKF + +G  L +  V  +V +G  W++ L K D K+W + 
Sbjct: 91  HFFKVILESTIRDGKLGIPHKFAKDYGSKLSSP-VFFEVPNGEVWELELMKLDGKLWVQN 150

Query: 71  GWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYP--------------LGCG 130
           GW +F + YS+E+GHFL FRY+ N  FHV+IFD++ASEI YP              L C 
Sbjct: 151 GWRKFTEHYSLELGHFLVFRYQRNCRFHVLIFDRSASEIHYPYANNISTDMTKKPVLQCP 210

Query: 131 GKVK----KRERFSISEEATKFQSLTMNPS--------FMVTMGASY--LHTGKSYLSIP 190
              K        FS ++   K ++L    S        F+V M  +Y  LH+  S LSIP
Sbjct: 211 RPPKIMRASNNGFSATKGNEKSKALERASSAIKSGNPFFLVFMQPTYVGLHSKVSCLSIP 270

Query: 191 QWFANAHMESPKEMSVEVSDGRVWKI-LCGERWPHGVKRVEMRGGWRDFARDNGLKKGDI 242
           + F+  ++    ++ +  S G  W          +G   V++  GW  F RDN L+ GD+
Sbjct: 271 KEFSRKYLMDQGDVILCDSSGNTWSAQYRATLGMNGQPYVKLLNGWDAFVRDNNLQVGDV 330

[Close]
BLAST of Cp4.1LG16g00430 vs. TrEMBL
Match: A0A059BBI7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00890 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.5e-33
Identity = 94/271 (34.69%), Postives = 139/271 (51.29%), Query Frame = 1 

Query: 10  PHFFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDE-KIWF 69
           PHFFK+IL QTL   KL IP +F+R+HG+ L    V LKV  G  W V L K+++  +W 
Sbjct: 35  PHFFKIILSQTLESGKLGIPKRFLRRHGKDL-LGLVFLKVEGGLTWPVKLEKSEDGMVWL 94

Query: 70  EKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYPLGCGG---------KV 129
            KGW +F++ YS+  GH L FRYEG+S F V+IFDK+ASEI+YP   G            
Sbjct: 95  WKGWRKFMEHYSIGFGHLLVFRYEGDSVFRVIIFDKSASEIDYPSSIGSYGPRPEGEFLS 154

Query: 130 KKRERFSISEEATKF------------------QSLTM----------NPSFMVTMGASY 189
           +K E     E++  F                   SLT           +P F V M  SY
Sbjct: 155 RKEEDVVEIEDSEGFAPRSRPRSKGLSRGFGGRSSLTALELASKFKSDHPFFRVVMRPSY 214

Query: 190 LHTGKSYLSIPQWFANAHMESPKEMSVEVSDGRVWKILCGERWPHGVKRVE-MRGGWRDF 242
           +   + YL +P  F   H++  K++       R W++   +   +G +R+  +  GW  F
Sbjct: 215 I---QKYLCVPCEFFRKHVQKNKQLVTLRYSDRSWQV---KLRSYGHRRMAFLSTGWSSF 274

[Close]
BLAST of Cp4.1LG16g00430 vs. TrEMBL
Match: G7KVW6_MEDTR (Plant-specific B3-DNA-binding domain protein OS=Medicago truncatula GN=MTR_7g050710 PE=4 SV=2)

HSP 1 Score: 144.4 bits (363), Expect = 1.8e-31
Identity = 103/309 (33.33%), Postives = 146/309 (47.25%), Query Frame = 1 

Query: 1   MASSFESATP-HFFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGL 60
           MAS      P  FFK+IL Q L Q  L +P KFV K+G+ L  + + LK  +GA+W++ L
Sbjct: 1   MASEIAEVKPIQFFKIILAQNLLQGNLRMPRKFVEKYGKGLP-KAICLKTPNGAKWRLNL 60

Query: 61  TKNDEKIWFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYPL------ 120
            K+D KIWFEKGW++F + +S+  GH L FRYE  S F V IF K+A EI+Y        
Sbjct: 61  VKSDGKIWFEKGWKQFAEHHSIGHGHLLLFRYEKTSKFEVQIFGKSALEIDYSFKRVESK 120

Query: 121 ----GCGGK---------VKKRERFSISE-------------EATKFQSLTMNPSFMVTM 180
               G G K          +KR+  S SE             +  K Q L +     ++ 
Sbjct: 121 KFSNGQGNKPPNGENCRAAQKRKANSSSEFHRQCEIASSSCVKFGKSQKLAVQQVDRMSN 180

Query: 181 GASYLHT------------------------GKSY------LSIPQWFANAHMESPK--- 240
           G   + T                        G SY      L+IP  F   H +  K   
Sbjct: 181 GKQVITTAKKVTTLERAQSFKICNPSFVVVMGASYVERRFLLNIPCLFGKTHFDLNKKRE 240

[Close]
BLAST of Cp4.1LG16g00430 vs. TAIR10
Match: AT3G18990.1 (AT3G18990.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 102.8 bits (255), Expect = 3.0e-22
Identity = 51/102 (50.00%), Postives = 64/102 (62.75%), Query Frame = 1 

Query: 10  PHFFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEKIWFE 69
           P F K+I   T+ + +L +P KFV K  + L    V L V  G  W+VGL K D KIWF+
Sbjct: 4   PFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVA-VALTVPDGHVWRVGLRKADNKIWFQ 63

Query: 70  KGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEY 112
            GW+EFV  YS+ IG+ L FRYEGNS F V IF+ + SEI Y
Sbjct: 64  DGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINY 104

[Close]
BLAST of Cp4.1LG16g00430 vs. TAIR10
Match: AT1G49475.1 (AT1G49475.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 95.5 bits (236), Expect = 4.8e-20
Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = 1 

Query: 6   ESATPHFFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEK 65
           E     F K+IL   + +  + +P +FVR  G  L T+ V L+   G +  + + +  ++
Sbjct: 28  EPTVKKFIKIILLSRIIEKMMKVPARFVR-FGPKL-TDNVTLQTPVGFKRSIRIKRIGDE 87

Query: 66  IWFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYPL 114
           +WFEKGW EF + +S+  GHFL F YEG+SCF VVIFD +ASEIEYPL
Sbjct: 88  VWFEKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPL 133

[Close]
BLAST of Cp4.1LG16g00430 vs. TAIR10
Match: AT3G18960.1 (AT3G18960.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 95.1 bits (235), Expect = 6.3e-20
Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = 1 

Query: 6   ESATPHFFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEK 65
           ES    FFK++LP T+    + IP +FV+  G  L +E V L+  +G +  + L +  E+
Sbjct: 24  ESPVKKFFKLVLPSTMKDKMMKIPPRFVKLQGSKL-SEVVTLETPAGFKRSIKLKRIGEE 83

Query: 66  IWFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYPL 114
           IWF +GW EF + +S+E GHFL F Y+ NS F V+IF+ +A E +YPL
Sbjct: 84  IWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPL 130

[Close]
BLAST of Cp4.1LG16g00430 vs. TAIR10
Match: AT4G01580.1 (AT4G01580.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-19
Identity = 46/108 (42.59%), Postives = 66/108 (61.11%), Query Frame = 1 

Query: 6   ESATPHFFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEK 65
           ES    FFK++LP T+    + IP +FV+  G  L +E V L   +G +  + L +  E+
Sbjct: 24  ESPVKKFFKLVLPSTMKDKMMRIPPRFVKLQGSKL-SEVVTLVTPAGYKRSIKLKRIGEE 83

Query: 66  IWFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYPL 114
           IWF +GW EF + +S+E GHFL F Y+ NS F V+IF+ +A E  YPL
Sbjct: 84  IWFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPL 130

[Close]
BLAST of Cp4.1LG16g00430 vs. TAIR10
Match: AT4G31680.1 (AT4G31680.1 Transcriptional factor B3 family protein)

HSP 1 Score: 90.9 bits (224), Expect = 1.2e-18
Identity = 69/241 (28.63%), Postives = 112/241 (46.47%), Query Frame = 1 

Query: 2   ASSFESATPHFFKVILPQTLTQSKLAIPHKFVRKHGEAL-ETEEVRLKV-ASGAEWKVGL 61
           AS       HFFK +LP    Q  L IP KF  +H E   E E V+L+  AS   W+V +
Sbjct: 4   ASQLSPTNKHFFKPLLPGF--QRNLNIPVKFFSEHIEGKHEGETVKLRADASKRTWEVKM 63

Query: 62  TKNDEKIWFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYPLGC---- 121
             N       +GW+EFV+ + + I  F+ FR+EG+  FHV     +  EI+YP       
Sbjct: 64  DGNR----LTEGWKEFVEAHDLRIRDFVVFRHEGDMVFHVTALGPSCCEIQYPQSISHEE 123

Query: 122 ---GGKVKKRERFSISEEATKFQSLTMNPSFMVTMGASYLHTGKSYLSIPQWFA--NAHM 181
               G+V+  ER  + E   K    +       +   ++ +     +++P+ FA  N   
Sbjct: 124 GEESGEVEISER-EVEENLQKEYDQSSADLNCFSQSVTHSNISNDLVTLPRDFAKRNGLD 183

Query: 182 ESPKEMSVEVSDGRVWKILCGERWPHGVKRVEMRGGWRDFARDNGLKKGDICVFELMETS 232
           +   E+ +   +G+ W+     R      +V + GGW+    +N LK GD C F+L++ +
Sbjct: 184 KGMHEIVLMNEEGKSWESEVRSRMS---GQVFIVGGWKSLCSENKLKGGDSCTFKLLQNA 234

[Close]
BLAST of Cp4.1LG16g00430 vs. NCBI nr
Match: gi|659116202|ref|XP_008457960.1| (PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo])

HSP 1 Score: 186.4 bits (472), Expect = 5.9e-44
Identity = 110/271 (40.59%), Postives = 161/271 (59.41%), Query Frame = 1 

Query: 7   SATPHFFKVILPQTLTQSKLAIPHKFVRKHG-EALETEEVRLKVAS-GAEWKVGLTKNDE 66
           S  PHFFKV+  + L + KL IP KFVR++G +A  T ++ LKVA+ G +W V LTK ++
Sbjct: 296 SDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTND 355

Query: 67  --KIWF-EKGWEEFVKFYSVEIGHFLTFRYEG-NSCFHVVIFDKTASEIEYPLGC----- 126
             ++WF + GW+ FV+FYSV + +FL F+YE  +S F+VVIFD+TA+EIEYP+       
Sbjct: 356 GTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICID 415

Query: 127 GGKVKKRERFSISEE----------------------ATKFQSLTMNPSFMVTMGASYLH 186
             + K ++  +IS+E                      AT FQS+T+NPSF+  M  S++H
Sbjct: 416 DAEEKVKKETNISQELMDNKKKLRSTTTSQREKAMANATAFQSMTINPSFLCKMSPSHIH 475

Query: 187 TGKSYLSIPQWFANAHMESPKEMSVEVSDGRVWKILCGERWPHGVK-RVEMRGGWRDFAR 242
                L++P+ F   H+E   E  ++VSDGR W+  C       +K R E+   WR F +
Sbjct: 476 RS---LNVPKRFVEMHIEKSMESILQVSDGRTWEGSCCFYMNKRMKKRAELASSWRKFKK 535

[Close]
BLAST of Cp4.1LG16g00430 vs. NCBI nr
Match: gi|629093291|gb|KCW59286.1| (hypothetical protein EUGRSUZ_H01965 [Eucalyptus grandis])

HSP 1 Score: 171.8 bits (434), Expect = 1.5e-39
Identity = 102/265 (38.49%), Postives = 149/265 (56.23%), Query Frame = 1 

Query: 5   FESATPHFFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDE 64
           FES TPHFFK++L   L   +L IP KFVRK+G +L ++ V L +ASG  W+V L + ++
Sbjct: 7   FESQTPHFFKIVLSDALQNGRLGIPKKFVRKYGSSL-SDLVFLHLASGDVWEVELLRGND 66

Query: 65  KIWFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYPLGCGGKVKK--- 124
             +  +GW +FVK Y++E GHFL FRYEG S F VVIFDK+A+EI+YPL       +   
Sbjct: 67  GAFLRRGWPDFVKHYAIEHGHFLVFRYEGGSAFRVVIFDKSATEIKYPLVSENDDPRMEE 126

Query: 125 -----------------RERFSISEEATKFQSLTMNPSFMVTMGASYLHTGKSYLSIPQW 184
                             E+    E AT FQS   NP F+  M  S++   +  LS P  
Sbjct: 127 DVGDASVEVFEDHSDQVSEKSEALERATSFQS--PNPFFLAIMQPSFI---RHCLSAPAR 186

Query: 185 FANAHM---ESPKEMSVEVSDGRVWKILCGERWPHGV----KRVEMRGGWRDFARDNGLK 242
           F   ++    S  ++ + VSD R W +    R+  G+    ++++   GW+ F +DN LK
Sbjct: 187 FFMKYIPNFRSKGDIILYVSDERFWSV----RYKFGIYGRRRQIKFNCGWKRFVQDNNLK 246

[Close]
BLAST of Cp4.1LG16g00430 vs. NCBI nr
Match: gi|629075032|gb|KCW44327.1| (hypothetical protein EUGRSUZ_L02216 [Eucalyptus grandis])

HSP 1 Score: 158.7 bits (400), Expect = 1.3e-35
Identity = 96/249 (38.55%), Postives = 134/249 (53.82%), Query Frame = 1 

Query: 5   FESATPHFFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDE 64
           FES TPHFFK+IL   L   +L IP KFVRK+G  L ++ V L+V SG  W+V L +  +
Sbjct: 7   FESQTPHFFKIILSDALQNGRLGIPKKFVRKYGSNL-SDLVFLQVPSGQAWEVELVRRTD 66

Query: 65  KIWFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYPLGCGGKVKKR-- 124
            +W  +GW +FVK Y+++ GHFL FRYEG S F VVIFDK+ASEI+YP+    ++ KR  
Sbjct: 67  GVWLRRGWPDFVKHYAIKHGHFLVFRYEGGSAFRVVIFDKSASEIKYPIIT--ELPKREE 126

Query: 125 -------ERFSISEEATKFQSLTMNPSFMVTMGASYLHTGKSYLSIPQWFANAHMESPKE 184
                  E+    + A  FQS   NP F+  M  S +       S+  W A         
Sbjct: 127 NEGDTGGEKSEALKRAASFQS--SNPFFLTLMQPSLI-----CHSLRFWLA--------- 186

Query: 185 MSVEVSDGRVWKILCGERWPHGV----KRVEMRGGWRDFARDNGLKKGDICVFELMETSE 241
                            R+  G+     +V++  GW+ F +DN LK GDIC+FEL+++  
Sbjct: 187 -----------------RYKFGIYGRKTQVKINSGWKLFVQDNNLKVGDICIFELLDSDL 219

[Close]
BLAST of Cp4.1LG16g00430 vs. NCBI nr
Match: gi|823192373|ref|XP_012491737.1| (PREDICTED: B3 domain-containing protein LOC_Os12g40080-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 157.1 bits (396), Expect = 3.8e-35
Identity = 94/260 (36.15%), Postives = 137/260 (52.69%), Query Frame = 1 

Query: 11  HFFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEKIWFEK 70
           HFFKVIL  T+   KL IPHKF + +G  L +  V  +V +G  W++ L K D K+W + 
Sbjct: 17  HFFKVILESTIRDGKLGIPHKFAKDYGSKLSSP-VFFEVPNGEVWELELMKLDGKLWVQN 76

Query: 71  GWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYP--------------LGCG 130
           GW +F + YS+E+GHFL FRY+ N  FHV+IFD++ASEI YP              L C 
Sbjct: 77  GWRKFTEHYSLELGHFLVFRYQRNCRFHVLIFDRSASEIHYPYANNISTDMTKKPVLQCP 136

Query: 131 GKVK----KRERFSISEEATKFQSLTMNPS--------FMVTMGASY--LHTGKSYLSIP 190
              K        FS ++   K ++L    S        F+V M  +Y  LH+  S LSIP
Sbjct: 137 RPPKIMRASNNGFSATKGNEKSKALERASSAIKSGNPFFLVFMQPTYVGLHSKVSCLSIP 196

Query: 191 QWFANAHMESPKEMSVEVSDGRVWKI-LCGERWPHGVKRVEMRGGWRDFARDNGLKKGDI 242
           + F+  ++    ++ +  S G  W          +G   V++  GW  F RDN L+ GD+
Sbjct: 197 KEFSRKYLMDQGDVILCDSSGNTWSAQYRATLGMNGQPYVKLLNGWDAFVRDNNLQVGDV 256

[Close]
BLAST of Cp4.1LG16g00430 vs. NCBI nr
Match: gi|763776477|gb|KJB43600.1| (hypothetical protein B456_007G209200, partial [Gossypium raimondii])

HSP 1 Score: 157.1 bits (396), Expect = 3.8e-35
Identity = 94/260 (36.15%), Postives = 137/260 (52.69%), Query Frame = 1 

Query: 11  HFFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEKIWFEK 70
           HFFKVIL  T+   KL IPHKF + +G  L +  V  +V +G  W++ L K D K+W + 
Sbjct: 91  HFFKVILESTIRDGKLGIPHKFAKDYGSKLSSP-VFFEVPNGEVWELELMKLDGKLWVQN 150

Query: 71  GWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYP--------------LGCG 130
           GW +F + YS+E+GHFL FRY+ N  FHV+IFD++ASEI YP              L C 
Sbjct: 151 GWRKFTEHYSLELGHFLVFRYQRNCRFHVLIFDRSASEIHYPYANNISTDMTKKPVLQCP 210

Query: 131 GKVK----KRERFSISEEATKFQSLTMNPS--------FMVTMGASY--LHTGKSYLSIP 190
              K        FS ++   K ++L    S        F+V M  +Y  LH+  S LSIP
Sbjct: 211 RPPKIMRASNNGFSATKGNEKSKALERASSAIKSGNPFFLVFMQPTYVGLHSKVSCLSIP 270

Query: 191 QWFANAHMESPKEMSVEVSDGRVWKI-LCGERWPHGVKRVEMRGGWRDFARDNGLKKGDI 242
           + F+  ++    ++ +  S G  W          +G   V++  GW  F RDN L+ GD+
Sbjct: 271 KEFSRKYLMDQGDVILCDSSGNTWSAQYRATLGMNGQPYVKLLNGWDAFVRDNNLQVGDV 330

The following BLAST results are available for this feature:
BLAST of Cp4.1LG16g00430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y3123_ORYSJ6.3e-2229.91B3 domain-containing protein Os03g0212300 OS=Oryza sativa subsp. japonica GN=Os0... [more]
VRN1_ARATH5.3e-2150.00B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 P... [more]
Y1475_ARATH8.5e-1944.44B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana GN=At1g49475 PE=2... [more]
Y3896_ARATH1.1e-1842.59B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana GN=At3g18960 PE=2... [more]
Y4158_ARATH2.5e-1842.59B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana GN=At4g01580 PE=2... [more]
BLAST of Cp4.1LG16g00430 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A059B061_EUCGR1.0e-3938.49Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01965 PE=4 SV=1[more]
A0A058ZRB6_EUCGR9.1e-3638.55Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L02216 PE=4 SV=1[more]
A0A0D2TIU7_GOSRA2.7e-3536.15Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_007G209200 PE=... [more]
A0A059BBI7_EUCGR1.5e-3334.69Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00890 PE=4 SV=1[more]
G7KVW6_MEDTR1.8e-3133.33Plant-specific B3-DNA-binding domain protein OS=Medicago truncatula GN=MTR_7g050... [more]
BLAST of Cp4.1LG16g00430 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18990.13.0e-2250.00 AP2/B3-like transcriptional factor family protein[more]
AT1G49475.14.8e-2044.44 AP2/B3-like transcriptional factor family protein[more]
AT3G18960.16.3e-2042.59 AP2/B3-like transcriptional factor family protein[more]
AT4G01580.11.4e-1942.59 AP2/B3-like transcriptional factor family protein[more]
AT4G31680.11.2e-1828.63 Transcriptional factor B3 family protein[more]
BLAST of Cp4.1LG16g00430 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659116202|ref|XP_008457960.1|5.9e-4440.59PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo][more]
gi|629093291|gb|KCW59286.1|1.5e-3938.49hypothetical protein EUGRSUZ_H01965 [Eucalyptus grandis][more]
gi|629075032|gb|KCW44327.1|1.3e-3538.55hypothetical protein EUGRSUZ_L02216 [Eucalyptus grandis][more]
gi|823192373|ref|XP_012491737.1|3.8e-3536.15PREDICTED: B3 domain-containing protein LOC_Os12g40080-like isoform X1 [Gossypiu... [more]
gi|763776477|gb|KJB43600.1|3.8e-3536.15hypothetical protein B456_007G209200, partial [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR015300DNA-bd_pseudobarrel_sf
IPR003340B3_DNA-bd
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG16g00430.1Cp4.1LG16g00430.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 12..104
score: 7.3E-19coord: 156..241
score: 1.8
IPR003340B3 DNA binding domainSMARTSM01019B3_2coord: 12..105
score: 4.1E-22coord: 143..242
score: 6.3
IPR003340B3 DNA binding domainPROFILEPS50863B3coord: 144..242
score: 13.197coord: 11..105
score: 13
IPR015300DNA-binding pseudobarrel domainGENE3DG3DSA:2.40.330.10coord: 3..105
score: 5.3E-28coord: 139..242
score: 1.4
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 5..105
score: 3.14E-25coord: 140..241
score: 4.32
NoneNo IPR availablePANTHERPTHR31674FAMILY NOT NAMEDcoord: 6..241
score: 4.3
NoneNo IPR availablePANTHERPTHR31674:SF1SUBFAMILY NOT NAMEDcoord: 6..241
score: 4.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG16g00430Csa2G292230Cucumber (Chinese Long) v2cpecuB268
Cp4.1LG16g00430CSPI02G14630Wild cucumber (PI 183967)cpecpiB270
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG16g00430Cp4.1LG19g11540Cucurbita pepo (Zucchini)cpecpeB295
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG16g00430Cucurbita pepo (Zucchini)cpecpeB068
Cp4.1LG16g00430Cucurbita pepo (Zucchini)cpecpeB292
Cp4.1LG16g00430Cucurbita pepo (Zucchini)cpecpeB316
Cp4.1LG16g00430Cucurbita pepo (Zucchini)cpecpeB322
Cp4.1LG16g00430Cucumber (Gy14) v1cgycpeB0971
Cp4.1LG16g00430Cucurbita maxima (Rimu)cmacpeB565
Cp4.1LG16g00430Cucurbita maxima (Rimu)cmacpeB623
Cp4.1LG16g00430Cucurbita maxima (Rimu)cmacpeB660
Cp4.1LG16g00430Cucurbita moschata (Rifu)cmocpeB517
Cp4.1LG16g00430Cucurbita moschata (Rifu)cmocpeB573
Cp4.1LG16g00430Watermelon (Charleston Gray)cpewcgB257
Cp4.1LG16g00430Watermelon (97103) v1cpewmB284
Cp4.1LG16g00430Watermelon (97103) v1cpewmB290
Cp4.1LG16g00430Melon (DHL92) v3.5.1cpemeB259
Cp4.1LG16g00430Cucumber (Gy14) v2cgybcpeB194
Cp4.1LG16g00430Cucumber (Gy14) v2cgybcpeB774
Cp4.1LG16g00430Melon (DHL92) v3.6.1cpemedB304
Cp4.1LG16g00430Melon (DHL92) v3.6.1cpemedB330
Cp4.1LG16g00430Silver-seed gourdcarcpeB0560
Cp4.1LG16g00430Silver-seed gourdcarcpeB1132
Cp4.1LG16g00430Silver-seed gourdcarcpeB1378
Cp4.1LG16g00430Silver-seed gourdcarcpeB1472
Cp4.1LG16g00430Cucumber (Chinese Long) v3cpecucB0335
Cp4.1LG16g00430Cucumber (Chinese Long) v3cpecucB0366
Cp4.1LG16g00430Wax gourdcpewgoB0356