Cp4.1LG16g00240 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG16g00240
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Geranylgeranyl diphosphate synthase
Location	Cp4.1LG16 : 496106 .. 497200 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGCGGTGAGTTTGGCAGCGTCGCTTCAATCCTGCTCCATTTTCACTCAAGCTTGTAGATCCAGTTGTTTTCCATTGAAAAGAGGGTCGAAATCGTTTGTGATTTCGAGGCAGAGGTTATCCAGTTCGTCGATTTCGTCTCTTTCCGTCTATGCAGTTCTAGCCAAGGAGGAGACTCTGACGGAGGAGGAAGAAGGGAAACCTACTTTCAATTTCAAGGAGTATATGGTTCAGAAGGGGAATTCCGTGAATCGAGCTTTGGATGCTGCGGTTTTTCTTCGAGAACCATTGAAGATTCATGAAGCGATGCGGTATTCTTTAATGGCGGGCGGGAAGCGCGTTCGTCCTGTTCTTTGCATCGCGGCGTGTGAACTCGTCGGCGGGAATGAATCCATGGCGATGCCGGCGGCTTGCGCTGTGGAAATGATACACACAATGTCCTTGATCCATGACGATCTTCCTTGTATGGATAACGACGATTTGCGCCGAGGAAAACCTACAAATCACAAGGTATTCGGCGAGGACGTTGCTGTTCTCGCTGGAGATGCGCTTTTGGCTTTCGCTTTTGAGCATGTTGCGGTGTCGACGATCGGCGTAGCGCCGCCGCGGATCGTTCGAGCAATTGGAGAGTTAGCGAAGTCGATTGGGTCTGAGGGCCTCGTCGCCGGCCAAGTTGTTGATATTAACTCCGAAGGAGCGGCGGATGCAGGCCTTCAGCAGCTTGAATTCATCCATTTGCATAAAACCGCCGCGCTTTTGGAAGCGGCAGTGGTTCTTGGAGCCATTCTCGGCGGCGGATCGAACGAGGAAGTTGAGAAACTCCGAAACTTCGCCAGGTATATCGGATTGCTATTTCAGGTAGTGGATGATATTCTGGATGTCACAAAATCTTCAAACGAATTGGGGAAAACTGCCGGGAAGGATTTGGTTGCTGATAAAGTTACATATCCAAAGCTCATGGGCATCGAAAAATCGAGGGAATTCGCTCAAAAATTGAACAGAGATGCTCAGGATCAGCTCTCTGGGTTTGATCCCCAGAAGGCTGCTCCATTGATTGCTTTGGCTAATTATATTGCTTATAGGCAAAATTGA

mRNA sequence

ATGAGTGCGGTGAGTTTGGCAGCGTCGCTTCAATCCTGCTCCATTTTCACTCAAGCTTGTAGATCCAGTTGTTTTCCATTGAAAAGAGGGTCGAAATCGTTTGTGATTTCGAGGCAGAGGTTATCCAGTTCGTCGATTTCGTCTCTTTCCGTCTATGCAGTTCTAGCCAAGGAGGAGACTCTGACGGAGGAGGAAGAAGGGAAACCTACTTTCAATTTCAAGGAGTATATGGTTCAGAAGGGGAATTCCGTGAATCGAGCTTTGGATGCTGCGGTTTTTCTTCGAGAACCATTGAAGATTCATGAAGCGATGCGGTATTCTTTAATGGCGGGCGGGAAGCGCGTTCGTCCTGTTCTTTGCATCGCGGCGTGTGAACTCGTCGGCGGGAATGAATCCATGGCGATGCCGGCGGCTTGCGCTGTGGAAATGATACACACAATGTCCTTGATCCATGACGATCTTCCTTGTATGGATAACGACGATTTGCGCCGAGGAAAACCTACAAATCACAAGGTATTCGGCGAGGACGTTGCTGTTCTCGCTGGAGATGCGCTTTTGGCTTTCGCTTTTGAGCATGTTGCGGTGTCGACGATCGGCGTAGCGCCGCCGCGGATCGTTCGAGCAATTGGAGAGTTAGCGAAGTCGATTGGGTCTGAGGGCCTCGTCGCCGGCCAAGTTGTTGATATTAACTCCGAAGGAGCGGCGGATGCAGGCCTTCAGCAGCTTGAATTCATCCATTTGCATAAAACCGCCGCGCTTTTGGAAGCGGCAGTGGTTCTTGGAGCCATTCTCGGCGGCGGATCGAACGAGGAAGTTGAGAAACTCCGAAACTTCGCCAGGTATATCGGATTGCTATTTCAGGTAGTGGATGATATTCTGGATGTCACAAAATCTTCAAACGAATTGGGGAAAACTGCCGGGAAGGATTTGGTTGCTGATAAAGTTACATATCCAAAGCTCATGGGCATCGAAAAATCGAGGGAATTCGCTCAAAAATTGAACAGAGATGCTCAGGATCAGCTCTCTGGGTTTGATCCCCAGAAGGCTGCTCCATTGATTGCTTTGGCTAATTATATTGCTTATAGGCAAAATTGA

Coding sequence (CDS)

ATGAGTGCGGTGAGTTTGGCAGCGTCGCTTCAATCCTGCTCCATTTTCACTCAAGCTTGTAGATCCAGTTGTTTTCCATTGAAAAGAGGGTCGAAATCGTTTGTGATTTCGAGGCAGAGGTTATCCAGTTCGTCGATTTCGTCTCTTTCCGTCTATGCAGTTCTAGCCAAGGAGGAGACTCTGACGGAGGAGGAAGAAGGGAAACCTACTTTCAATTTCAAGGAGTATATGGTTCAGAAGGGGAATTCCGTGAATCGAGCTTTGGATGCTGCGGTTTTTCTTCGAGAACCATTGAAGATTCATGAAGCGATGCGGTATTCTTTAATGGCGGGCGGGAAGCGCGTTCGTCCTGTTCTTTGCATCGCGGCGTGTGAACTCGTCGGCGGGAATGAATCCATGGCGATGCCGGCGGCTTGCGCTGTGGAAATGATACACACAATGTCCTTGATCCATGACGATCTTCCTTGTATGGATAACGACGATTTGCGCCGAGGAAAACCTACAAATCACAAGGTATTCGGCGAGGACGTTGCTGTTCTCGCTGGAGATGCGCTTTTGGCTTTCGCTTTTGAGCATGTTGCGGTGTCGACGATCGGCGTAGCGCCGCCGCGGATCGTTCGAGCAATTGGAGAGTTAGCGAAGTCGATTGGGTCTGAGGGCCTCGTCGCCGGCCAAGTTGTTGATATTAACTCCGAAGGAGCGGCGGATGCAGGCCTTCAGCAGCTTGAATTCATCCATTTGCATAAAACCGCCGCGCTTTTGGAAGCGGCAGTGGTTCTTGGAGCCATTCTCGGCGGCGGATCGAACGAGGAAGTTGAGAAACTCCGAAACTTCGCCAGGTATATCGGATTGCTATTTCAGGTAGTGGATGATATTCTGGATGTCACAAAATCTTCAAACGAATTGGGGAAAACTGCCGGGAAGGATTTGGTTGCTGATAAAGTTACATATCCAAAGCTCATGGGCATCGAAAAATCGAGGGAATTCGCTCAAAAATTGAACAGAGATGCTCAGGATCAGCTCTCTGGGTTTGATCCCCAGAAGGCTGCTCCATTGATTGCTTTGGCTAATTATATTGCTTATAGGCAAAATTGA

Protein sequence

MSAVSLAASLQSCSIFTQACRSSCFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEETLTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLCIAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQQLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSNELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIAYRQN

Homology

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BLAST of Cp4.1LG16g00240 vs. Swiss-Prot
Match: GGPPS_HEVBR (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis GN=GGPS PE=1 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 2.5e-144
Identity = 270/375 (72.00%), Postives = 318/375 (84.80%), Query Frame = 1


Query: 1   MSAVSLAASLQSCSIFTQACRSSCFPLKRGSKSFVISRQRLSSSSISSL---------SV 60
           MS+V+L + + +  +  QA RS     +  SKSF +    L S +IS           SV
Sbjct: 1   MSSVNLGSWVHTSYVLNQATRS-----RSKSKSFSLPFNPLKSLAISFAYRKSERPISSV 60

Query: 61  YAVLAKEETLTEEEEGKP--TFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLM 120
            A++ KEE   +EE+  P  +F+FK YM+QKGNS+N+AL+AA+ L+EP KIHE+MRYSL+
Sbjct: 61  SAIITKEEETLQEEQNNPPPSFDFKSYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLL 120

Query: 121 AGGKRVRPVLCIAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN 180
           AGGKRVRP LC+AACELVGGN+SMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN
Sbjct: 121 AGGKRVRPALCLAACELVGGNDSMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN 180

Query: 181 HKVFGEDVAVLAGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDI 240
           H VFGEDVAVLAGDALLAFAFEH+AVST+ V+  RIVRA+GELAK+IG+EGLVAGQVVDI
Sbjct: 181 HIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDI 240

Query: 241 NSEGAADAGLQQLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVV 300
           NSEG+++  L++LEFIH+HKTA LLE AVVLGAILGGG++EEVEKLR +AR IGLLFQVV
Sbjct: 241 NSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLLFQVV 300

Query: 301 DDILDVTKSSNELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKA 360
           DDILDVTKSS ELGKTAGKDLVADKVTYPKL+GIEKSREFA+KLN++AQ+QL+GFDP+KA
Sbjct: 301 DDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFDPEKA 360

Query: 361 APLIALANYIAYRQN 365
           APLIALANYIA+RQN
Sbjct: 361 APLIALANYIAHRQN 370

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BLAST of Cp4.1LG16g00240 vs. Swiss-Prot
Match: GGPPS_CATRO (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Catharanthus roseus GN=GGPS1 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 1.4e-137
Identity = 256/352 (72.73%), Postives = 293/352 (83.24%), Query Frame = 1


Query: 24  CFPLKRGSK-SFVISRQ-RLSSSSISSLSVYAVLAKEETLTEEEE---------GKPTFN 83
           C PLK     SF +S   R    S S LS+ A++ KE+T  E E             +F+
Sbjct: 6   CHPLKNQLPISFFLSGTIRKPIFSCSRLSISAIITKEQTQEESESKSKKEVAFSSSSSFD 65

Query: 84  FKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLCIAACELVGGNES 143
           FK YM+ K NSVN+AL+ AV +REPLKIHE+MRYSL+AGGKRVRP+LCIAACEL GG ES
Sbjct: 66  FKAYMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTES 125

Query: 144 MAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEH 203
           +AMP+ACAVEMIHTMSL+HDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEH
Sbjct: 126 VAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEH 185

Query: 204 VAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQQLEFIHLHKTAA 263
           +A +T GV+  RIVR +GELAK IGSEGLVAGQVVD+ SEG AD GL+ LEFIH+HKTAA
Sbjct: 186 IATATKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAA 245

Query: 264 LLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSNELGKTAGKDLVA 323
           LLE +VVLGAI+GG ++E++ KLR FAR IGLLFQVVDDILDVTKSS ELGKTAGKDLVA
Sbjct: 246 LLEGSVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVA 305

Query: 324 DKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIAYRQN 365
           DKVTYPKL+GI+KSREFA+KLNR+AQ+QL+ FDP+KAAPLIALANYIAYR N
Sbjct: 306 DKVTYPKLLGIDKSREFAEKLNREAQEQLAEFDPEKAAPLIALANYIAYRDN 357

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BLAST of Cp4.1LG16g00240 vs. Swiss-Prot
Match: GGPP1_ARATH (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana GN=GGPPS1 PE=1 SV=2)

HSP 1 Score: 480.3 bits (1235), Expect = 1.8e-134
Identity = 259/355 (72.96%), Postives = 295/355 (83.10%), Query Frame = 1


Query: 14  SIFTQACRSSCFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEETLTEEEEGKPTFNF 73
           SI T++   SC        SF   R   SSSSI S SV   + KE+ L + E    +F+F
Sbjct: 22  SILTKSRSRSCPITLTKPISFRSKRTVSSSSSIVSSSV---VTKEDNLRQSEPS--SFDF 81

Query: 74  KEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLCIAACELVGGNESM 133
             Y++ K   VN+ALD+AV LREPLKIHEAMRYSL+AGGKRVRPVLCIAACELVGG ES 
Sbjct: 82  MSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEEST 141

Query: 134 AMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHV 193
           AMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALL+FAFEH+
Sbjct: 142 AMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHL 201

Query: 194 AVSTIG--VAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEG--AADAGLQQLEFIHLHK 253
           A +T    V+P R+VRA+GELAK+IG+EGLVAGQVVDI+SEG    D GL+ LEFIHLHK
Sbjct: 202 ASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHK 261

Query: 254 TAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSNELGKTAGKD 313
           TAALLEA+ VLGAI+GGGS++E+E+LR FAR IGLLFQVVDDILDVTKSS ELGKTAGKD
Sbjct: 262 TAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKD 321

Query: 314 LVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIAYRQN 365
           L+ADK+TYPK+MG+EKSREFA+KLNR+A+DQL GFD  K APL+ALANYIAYRQN
Sbjct: 322 LIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQN 371

[Close]

BLAST of Cp4.1LG16g00240 vs. Swiss-Prot
Match: GGPPS_SINAL (Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis alba GN=GGPS1 PE=1 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 2.1e-130
Identity = 250/354 (70.62%), Postives = 295/354 (83.33%), Query Frame = 1


Query: 14  SIFTQACRSSCFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEETLTEEEEGKPTFNF 73
           +I TQ+ RS   P     K   ++ +R  SSS SS    +++ KE+   +      +F+F
Sbjct: 20  TILTQS-RSRSPPSLITLKPISLTPKRTVSSSSSS----SLITKEDNNLKSSSS--SFDF 79

Query: 74  KEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLCIAACELVGGNESM 133
             Y+++K +SVN+ALD+AV LREPLKIHEAMRYSL+AGGKRVRPVLCIAACELVGG ES+
Sbjct: 80  MSYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESL 139

Query: 134 AMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHV 193
           AMPA CAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV+GEDVAVLAGDALL+FAFEH+
Sbjct: 140 AMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHL 199

Query: 194 AVSTIG-VAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEG--AADAGLQQLEFIHLHKT 253
           A +T   V+P R+VRA+GELAK+IG+EGLVAGQVVDI+SEG    + GL+ L+FIHLHKT
Sbjct: 200 ASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLHKT 259

Query: 254 AALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSNELGKTAGKDL 313
           AALLEA+ VLG I+GGGS+EE+E+LR FAR IGLLFQVVDDILDVTKSS ELGKTAGKDL
Sbjct: 260 AALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDL 319

Query: 314 VADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIAYRQN 365
           +ADK+TYPKLMG+EKSREFA+KLN +A+DQL GFD  K APL+ALANYIA RQN
Sbjct: 320 IADKLTYPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQN 366

[Close]

BLAST of Cp4.1LG16g00240 vs. Swiss-Prot
Match: GGPPS_CAPAN (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum annuum GN=GGPS1 PE=3 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 7.4e-128
Identity = 246/371 (66.31%), Postives = 289/371 (77.90%), Query Frame = 1


Query: 1   MSAVSLAASLQSCSIFTQACRSSCF------PLKRGSKSFVISRQRLSSSSISSLSVYAV 60
           M+ V L A  Q+C +F Q      F      PLK    +  ++++R      S L+V A+
Sbjct: 4   MNLVDLWAQ-QACLVFNQTLSYKSFNGFMKIPLKNSKINPKLNKKR----PFSPLTVSAI 63

Query: 61  LA-KEETLTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGK 120
              KE+   E  + +  FNFK Y+ +K  SVN+ALD A+ ++EP  IHEAMRYSL+AGGK
Sbjct: 64  ATTKEDERIEAAQTEEPFNFKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGGK 123

Query: 121 RVRPVLCIAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVF 180
           RVRP+LC+AACELVGGN+  AM AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHK++
Sbjct: 124 RVRPMLCLAACELVGGNQENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIY 183

Query: 181 GEDVAVLAGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEG 240
           GEDVAVLAGD+LLAFAFEH+  ST GV P RIV A+ ELAKSIG+EGLVAGQV DI   G
Sbjct: 184 GEDVAVLAGDSLLAFAFEHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTG 243

Query: 241 AADAGLQQLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDIL 300
            A   L+ LEFIH+HKTAALLE++VVLGAILGGG+N EVEKLR FAR IGLLFQVVDDIL
Sbjct: 244 NASVSLETLEFIHVHKTAALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDIL 303

Query: 301 DVTKSSNELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLI 360
           DVTKSS ELGKTAGKDLV DK TYPKL+G+EK++EFA +LNR+A+ QL GFD +KAAPLI
Sbjct: 304 DVTKSSEELGKTAGKDLVVDKTTYPKLLGLEKAKEFAAELNREAKQQLEGFDSRKAAPLI 363

Query: 361 ALANYIAYRQN 365
           ALA+YIAYR N
Sbjct: 364 ALADYIAYRDN 369

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BLAST of Cp4.1LG16g00240 vs. TrEMBL
Match: W6CYI2_CITLA (Geranylgeranyl diphosphate synthase OS=Citrullus lanatus GN=GGPS PE=2 SV=1)

HSP 1 Score: 656.8 bits (1693), Expect = 1.6e-185
Identity = 343/364 (94.23%), Postives = 351/364 (96.43%), Query Frame = 1


Query: 1   MSAVSLAASLQSCSIFTQACRSSCFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60
           MSA+SL  S QSCSIFTQACRSS FPLKRG KSFVI + RL SSSISSLS+ AVLAKEET
Sbjct: 1   MSAMSLGTSFQSCSIFTQACRSSSFPLKRGFKSFVIPKPRLPSSSISSLSICAVLAKEET 60

Query: 61  LTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120
           LTEEE GKPTFNFKEYM+QKGNSVN ALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC
Sbjct: 61  LTEEE-GKPTFNFKEYMIQKGNSVNHALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120

Query: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180
           IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL
Sbjct: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180

Query: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240
           AGDALLAFAFEH+AVSTIGVAPPRIVRAIGELAKSIG+EGLVAGQVVDINSEGAADAGL+
Sbjct: 181 AGDALLAFAFEHIAVSTIGVAPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLE 240

Query: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300
           QLEFIHLHKTAALLEAAVVLGAILGGGSNE+VEKLRNFARYIGLLFQVVDDILDVTKSSN
Sbjct: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDVTKSSN 300

Query: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA 360
           ELGKTAGKDLVADKV YPKLMGIEKSREFAQKLNRDAQDQLSGFDP KAAPLIALANYIA
Sbjct: 301 ELGKTAGKDLVADKVAYPKLMGIEKSREFAQKLNRDAQDQLSGFDPDKAAPLIALANYIA 360

Query: 361 YRQN 365
           YRQN
Sbjct: 361 YRQN 363

[Close]

BLAST of Cp4.1LG16g00240 vs. TrEMBL
Match: T1RR58_CUCME (Geranylgeranyl pyrophosphate synthase OS=Cucumis melo GN=GGPS PE=3 SV=1)

HSP 1 Score: 642.5 bits (1656), Expect = 3.1e-181
Identity = 335/364 (92.03%), Postives = 350/364 (96.15%), Query Frame = 1


Query: 1   MSAVSLAASLQSCSIFTQACRSSCFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60
           MSA+SL  S QSCSIF+QA RS+ +PLKRG KSF+I ++RL +SSISSLS+ AVL KEET
Sbjct: 1   MSAMSLGTSFQSCSIFSQASRSTGYPLKRGLKSFIIPKRRLPTSSISSLSICAVLTKEET 60

Query: 61  LTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120
           LTEEE GKPTFNFKEYMVQKG SVN ALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC
Sbjct: 61  LTEEE-GKPTFNFKEYMVQKGASVNHALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120

Query: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180
           IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL
Sbjct: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180

Query: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240
           AGDALLAFAFEH+AVSTIGV+PPRIVRAIGELAKSIG+EGLVAGQVVDINSEGAADAGL+
Sbjct: 181 AGDALLAFAFEHIAVSTIGVSPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLE 240

Query: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300
           QLEFIHLHKTAALLEAAVVLGAILGGGSNE+VEKLRNFARYIGLLFQVVDDILDVTKSSN
Sbjct: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDVTKSSN 300

Query: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA 360
           ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQ+QLSGFDP KAAPLIALANYIA
Sbjct: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQEQLSGFDPDKAAPLIALANYIA 360

Query: 361 YRQN 365
           YRQN
Sbjct: 361 YRQN 363

[Close]

BLAST of Cp4.1LG16g00240 vs. TrEMBL
Match: A0A0A0LMU2_CUCSA (Geranyl diphosphate synthase large subunit OS=Cucumis sativus GN=Csa_2G296070 PE=3 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 1.1e-178
Identity = 333/369 (90.24%), Postives = 350/369 (94.85%), Query Frame = 1


Query: 1   MSAVSLAASLQSCSIFTQACRSSCFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60
           MSA+SL  S QSCSIF+QA RS+ +PLKRG KSF+I ++RL +SSISSLS+ AVL KEET
Sbjct: 1   MSAMSLGTSFQSCSIFSQASRSTGYPLKRGLKSFIIPKRRLPTSSISSLSICAVLTKEET 60

Query: 61  LTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120
           LTEEE GKPTFNFKEYMVQKG SVN ALDAAVFLREPL+IHEAMRYSLMAGGKRVRPVLC
Sbjct: 61  LTEEE-GKPTFNFKEYMVQKGASVNHALDAAVFLREPLRIHEAMRYSLMAGGKRVRPVLC 120

Query: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180
           IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL
Sbjct: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180

Query: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240
           AGDALLAFAFEH+AVSTIGV+PPRIVRAIGELAKSIG+EGLVAGQVVDINSEGAADAGL+
Sbjct: 181 AGDALLAFAFEHIAVSTIGVSPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLE 240

Query: 241 QLEFIHLHKTAALL-----EAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDV 300
           QLE+IHLHKTAALL     EAAVVLGAILGGGSNE+VEKLRNFARYIGLLFQVVDDILDV
Sbjct: 241 QLEYIHLHKTAALLEAAGGEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDV 300

Query: 301 TKSSNELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIAL 360
           TKSSNELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQ+QLSGFDP KAAPLIAL
Sbjct: 301 TKSSNELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQEQLSGFDPDKAAPLIAL 360

Query: 361 ANYIAYRQN 365
           ANYIAYRQN
Sbjct: 361 ANYIAYRQN 368

[Close]

BLAST of Cp4.1LG16g00240 vs. TrEMBL
Match: D6BCR2_CORAV (Geranylgeranyl diphosphate synthase OS=Corylus avellana GN=GGPPS PE=2 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 1.6e-153
Identity = 294/376 (78.19%), Postives = 326/376 (86.70%), Query Frame = 1


Query: 1   MSAVSLAASLQSCSIFTQACRSSCF---------PLKRGSKSFVISRQRLSSSSISSLSV 60
           MS V+L+  +Q+CS+F QA RS            PLK    SF+  ++R    SISS+SV
Sbjct: 1   MSCVNLSTWVQTCSMFNQAGRSRSMSTPSFQILHPLKNIPISFIPPKRR---RSISSVSV 60

Query: 61  YAVLAKEETLTEEEEGKP---TFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSL 120
            AVL KE+TL EEEE +    TFNFK YM+QK NSVN+ALDAAV L++P KIHEAMRYSL
Sbjct: 61  SAVLTKEDTLREEEESESEARTFNFKTYMLQKANSVNQALDAAVSLKDPRKIHEAMRYSL 120

Query: 121 MAGGKRVRPVLCIAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPT 180
           +AGGKRVRP+LCIAACELVGG ES+AMPAAC+VEMIHTMSLIHDDLPCMDNDDLRRGKPT
Sbjct: 121 LAGGKRVRPMLCIAACELVGGTESIAMPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPT 180

Query: 181 NHKVFGEDVAVLAGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVD 240
           NHKVFGEDVAVLAGDALLAF+FEH+AVST GV P RI+RAIGELA+SIG+EGLVAGQVVD
Sbjct: 181 NHKVFGEDVAVLAGDALLAFSFEHIAVSTEGVPPARILRAIGELARSIGAEGLVAGQVVD 240

Query: 241 INSEGAADAGLQQLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQV 300
           I SEG +D GL+ LEFIHLHKTAALLE AVVLGAILGGGSNEEVEKLRNFARYIGLLFQV
Sbjct: 241 ICSEGLSDVGLEHLEFIHLHKTAALLEGAVVLGAILGGGSNEEVEKLRNFARYIGLLFQV 300

Query: 301 VDDILDVTKSSNELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQK 360
           VDDILDVTKSS ELGKTAGKDLVADKVTYPKLMG+EKSREFA+KLN+DAQDQL+GFD +K
Sbjct: 301 VDDILDVTKSSQELGKTAGKDLVADKVTYPKLMGVEKSREFAEKLNKDAQDQLAGFDAEK 360

Query: 361 AAPLIALANYIAYRQN 365
           AAPLIALANYIA+RQN
Sbjct: 361 AAPLIALANYIAHRQN 373

[Close]

BLAST of Cp4.1LG16g00240 vs. TrEMBL
Match: C4NAM8_HUMLU (Geranyl diphosphate synthase large subunit OS=Humulus lupulus PE=2 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 3.9e-152
Identity = 292/372 (78.49%), Postives = 327/372 (87.90%), Query Frame = 1


Query: 1   MSAVSLAASLQSCSIFTQA--CRSSCF------PLKRGSKSFVISRQRLSSSSISSLSVY 60
           MS+V+L   +Q+CS+F QA   RSS F      PLK+   SF   +QR  +SS SS+S  
Sbjct: 1   MSSVNLTW-VQTCSMFNQAGRSRSSTFNLLHYHPLKKVPFSFQTPKQRRPTSSFSSIS-- 60

Query: 61  AVLAKEETLTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGG 120
           AVL ++E +TE+EE K TFNFK YMVQK NSVN+ALDAAV LREP  IHEAMRYSL+AGG
Sbjct: 61  AVLTEQEAVTEDEEQKSTFNFKSYMVQKANSVNQALDAAVLLREPQMIHEAMRYSLLAGG 120

Query: 121 KRVRPVLCIAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV 180
           KRVRPVLC++ACELVGG+ES+AMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV
Sbjct: 121 KRVRPVLCLSACELVGGDESVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV 180

Query: 181 FGEDVAVLAGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSE 240
           FGEDVAVLAGDALLA+AFEHVAVST+GV   RI+RAIGELAKSIGSEGLVAGQVVDI+SE
Sbjct: 181 FGEDVAVLAGDALLAYAFEHVAVSTVGVPAARIIRAIGELAKSIGSEGLVAGQVVDIDSE 240

Query: 241 GAADAGLQQLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDI 300
           G A+ GL+QLEFIHLHKTAALLEA+VVLGAILGGG++E+VE+LR+FAR IGLLFQ VDDI
Sbjct: 241 GLANVGLEQLEFIHLHKTAALLEASVVLGAILGGGTDEQVEELRSFARCIGLLFQAVDDI 300

Query: 301 LDVTKSSNELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPL 360
           LDVTKSS ELGKTAGKDLVADK TYP+LMGIEKSREFA+KLNR+AQ+ L GFDPQKAAPL
Sbjct: 301 LDVTKSSQELGKTAGKDLVADKATYPRLMGIEKSREFAEKLNREAQEHLGGFDPQKAAPL 360

Query: 361 IALANYIAYRQN 365
           IALANYIAYRQN
Sbjct: 361 IALANYIAYRQN 369

[Close]

BLAST of Cp4.1LG16g00240 vs. TAIR10
Match: AT4G36810.1 (AT4G36810.1 geranylgeranyl pyrophosphate synthase 1)

HSP 1 Score: 480.3 bits (1235), Expect = 1.0e-135
Identity = 259/355 (72.96%), Postives = 295/355 (83.10%), Query Frame = 1


Query: 14  SIFTQACRSSCFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEETLTEEEEGKPTFNF 73
           SI T++   SC        SF   R   SSSSI S SV   + KE+ L + E    +F+F
Sbjct: 22  SILTKSRSRSCPITLTKPISFRSKRTVSSSSSIVSSSV---VTKEDNLRQSEPS--SFDF 81

Query: 74  KEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLCIAACELVGGNESM 133
             Y++ K   VN+ALD+AV LREPLKIHEAMRYSL+AGGKRVRPVLCIAACELVGG ES 
Sbjct: 82  MSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEEST 141

Query: 134 AMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHV 193
           AMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALL+FAFEH+
Sbjct: 142 AMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHL 201

Query: 194 AVSTIG--VAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEG--AADAGLQQLEFIHLHK 253
           A +T    V+P R+VRA+GELAK+IG+EGLVAGQVVDI+SEG    D GL+ LEFIHLHK
Sbjct: 202 ASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHK 261

Query: 254 TAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSNELGKTAGKD 313
           TAALLEA+ VLGAI+GGGS++E+E+LR FAR IGLLFQVVDDILDVTKSS ELGKTAGKD
Sbjct: 262 TAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKD 321

Query: 314 LVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIAYRQN 365
           L+ADK+TYPK+MG+EKSREFA+KLNR+A+DQL GFD  K APL+ALANYIAYRQN
Sbjct: 322 LIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQN 371

[Close]

BLAST of Cp4.1LG16g00240 vs. TAIR10
Match: AT2G18620.1 (AT2G18620.1 Terpenoid synthases superfamily protein)

HSP 1 Score: 456.4 bits (1173), Expect = 1.6e-128
Identity = 236/317 (74.45%), Postives = 270/317 (85.17%), Query Frame = 1


Query: 50  SVYAVLAKEETLTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLM 109
           +V +V A++E +         F+F  YM+ K N+VN ALD+AV LREP+KIHEA+RYSL+
Sbjct: 37  TVLSVTARDEGIIHNH-----FDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLL 96

Query: 110 AGGKRVRPVLCIAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN 169
           A GKRVRPVLCIAACELVGG ES+A+PAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN
Sbjct: 97  ARGKRVRPVLCIAACELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN 156

Query: 170 HKVFGEDVAVLAGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDI 229
           HKVFGEDVAVLAGDAL++FAFEH+A ST  V+P R+VRAIGELAK+IGS+GLVAGQVVD+
Sbjct: 157 HKVFGEDVAVLAGDALISFAFEHLATST-AVSPARVVRAIGELAKAIGSKGLVAGQVVDL 216

Query: 230 NSEG--AADAGLQQLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQ 289
            S G    D GL+ LEFIH+HKTA LLEAA VLGAI+GGGS+EEVEKLR FAR IGLLFQ
Sbjct: 217 TSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQ 276

Query: 290 VVDDILDVTKSSNELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQ 349
           VVDDILDVTKSS ELGKTAGKDL+ADK+TYPKLMG+EKS++FA KL  DA +QL GFD  
Sbjct: 277 VVDDILDVTKSSEELGKTAGKDLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSS 336

Query: 350 KAAPLIALANYIAYRQN 365
           +  PL+ALANYIA RQN
Sbjct: 337 RVKPLLALANYIAKRQN 347

[Close]

BLAST of Cp4.1LG16g00240 vs. TAIR10
Match: AT3G14550.1 (AT3G14550.1 geranylgeranyl pyrophosphate synthase 3)

HSP 1 Score: 419.5 bits (1077), Expect = 2.2e-117
Identity = 225/348 (64.66%), Postives = 272/348 (78.16%), Query Frame = 1


Query: 34  FVISRQRL--SSSSISSLSVYAVLAKEETLTEE-------EEGK-----PTFNFKEYMVQ 93
           F+ SR R   S SS+ SL     L+    LT +        EGK       F+FK YM++
Sbjct: 13  FIQSRGRRDNSISSVKSLKKRTGLSPSSALTSQGGRDMIPPEGKCNDHNSAFDFKLYMIR 72

Query: 94  KGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLCIAACELVGGNESMAMPAAC 153
           K  SVN ALD +V LREPL + EA+RYSL+AGGKRVRP+LCIA CELVGG+E+ AM AAC
Sbjct: 73  KAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAAC 132

Query: 154 AVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHVAVSTIG 213
           AVEMIHT SLIHDDLPCMDN DLRRGKPTNHKV+GED+AVLAGDALLA AFEH+   + G
Sbjct: 133 AVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTFVSSG 192

Query: 214 -VAPPRIVRAIGELAKSIGSEGLVAGQVVDINSE--GAADAGLQQLEFIHLHKTAALLEA 273
            VAP R++RA+ ELA++IG+ GLVAGQ++D+ SE       GL+ LEFIHLHKTAALLEA
Sbjct: 193 LVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEA 252

Query: 274 AVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSNELGKTAGKDLVADKVT 333
           A VLG I+GGG+ EE+EKLR +AR IGLLFQVVDDILDVTKS+ ELGKTAGKD++A K+T
Sbjct: 253 AAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLT 312

Query: 334 YPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIAYRQN 365
           YP+L+G+E+S+E A+KL R+A++QL GFDP KAAPL+ALA+YIA R N
Sbjct: 313 YPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360

[Close]

BLAST of Cp4.1LG16g00240 vs. TAIR10
Match: AT3G14530.1 (AT3G14530.1 Terpenoid synthases superfamily protein)

HSP 1 Score: 419.5 bits (1077), Expect = 2.2e-117
Identity = 226/358 (63.13%), Postives = 274/358 (76.54%), Query Frame = 1


Query: 22  SSCFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEETLTEEEEG------------KP 81
           SS F   RG       R+  S SS+ SL    VL+    LT ++ G              
Sbjct: 10  SSLFSQSRG-------RRDNSISSVKSLRKRTVLSLSSALTSQDAGHMIQPEGKSNDNNS 69

Query: 82  TFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLCIAACELVGG 141
            F+FK YM++K  SVN ALD +V L +PL I EA+RYSL+AGGKRVRP+LCIAACELVGG
Sbjct: 70  AFDFKLYMIRKAESVNAALDVSVPLLKPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGG 129

Query: 142 NESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFA 201
           +E+ AM AACAVEMIHT SLIHDDLPCMDN DLRRGKPTNHKV+GED+AVLAGDALLA A
Sbjct: 130 DEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALA 189

Query: 202 FEHVAVSTIG-VAPPRIVRAIGELAKSIGSEGLVAGQVVDINSE--GAADAGLQQLEFIH 261
           FEH+ V + G VAP +++RA+ ELA++IG+ GLVAGQ++D+ SE       GL+ LEFIH
Sbjct: 190 FEHMTVVSSGLVAPEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIH 249

Query: 262 LHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSNELGKTA 321
           LHKTAALLEAA VLG I+GGG+ +E+EKLR +AR IGLLFQVVDDILDVTKS+ ELGKTA
Sbjct: 250 LHKTAALLEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTA 309

Query: 322 GKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIAYRQN 365
           GKD++A K+TYP+L+G+E SRE A+KL R+A++QL GFDP KAAPL+ALA+YIA R N
Sbjct: 310 GKDVMAGKLTYPRLIGLEGSREVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360

[Close]

BLAST of Cp4.1LG16g00240 vs. TAIR10
Match: AT3G29430.1 (AT3G29430.1 Terpenoid synthases superfamily protein)

HSP 1 Score: 412.1 bits (1058), Expect = 3.4e-115
Identity = 230/373 (61.66%), Postives = 283/373 (75.87%), Query Frame = 1


Query: 6   LAASLQSCSIFTQACRSSCFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEETLTEE- 65
           +A +L S S+F Q          RG       R+  S SS ++L    VL+    L+ + 
Sbjct: 1   MATTLSSSSLFIQF---------RG-------RRYNSLSSFNNLQKRTVLSLSCALSSQG 60

Query: 66  -----EEGKPT-----FNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKR 125
                 EGK       F+FK YM++K  SV+ AL+ +V L+EPL I EA+RYSL+AGGKR
Sbjct: 61  GDMIPPEGKSNDRNSAFDFKSYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAGGKR 120

Query: 126 VRPVLCIAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFG 185
           VRP+LCIAACELVGG+E+ AM AACAVEMIHT SLIHDDLPCMD+ DLRRGKPTNHK FG
Sbjct: 121 VRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFG 180

Query: 186 EDVAVLAGDALLAFAFEHVAVSTIG-VAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEG 245
           ED+AVLAGDALLA AFEH+   + G VAP R++RA+ ELAK+IG++GLVAGQV D+ S+G
Sbjct: 181 EDMAVLAGDALLALAFEHMTFVSNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQG 240

Query: 246 --AADAGLQQLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDD 305
               D GL++LEFIHLHKTAALLEAA VLGAI+GGG+ EE+EKLR +AR IGLLFQVVDD
Sbjct: 241 LNPDDVGLERLEFIHLHKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDD 300

Query: 306 ILDVTKSSNELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAP 365
           ILDVT+S+ ELGKTAGKD++A K+TYP+L+G+E+SRE A+KL R+A +QL GFD  KAAP
Sbjct: 301 ILDVTESTKELGKTAGKDVMAGKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSDKAAP 357

[Close]

BLAST of Cp4.1LG16g00240 vs. NCBI nr
Match: gi|584300514|gb|AHI88418.1| (geranylgeranyl diphosphate synthase [Citrullus lanatus])

HSP 1 Score: 656.8 bits (1693), Expect = 2.3e-185
Identity = 343/364 (94.23%), Postives = 351/364 (96.43%), Query Frame = 1


Query: 1   MSAVSLAASLQSCSIFTQACRSSCFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60
           MSA+SL  S QSCSIFTQACRSS FPLKRG KSFVI + RL SSSISSLS+ AVLAKEET
Sbjct: 1   MSAMSLGTSFQSCSIFTQACRSSSFPLKRGFKSFVIPKPRLPSSSISSLSICAVLAKEET 60

Query: 61  LTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120
           LTEEE GKPTFNFKEYM+QKGNSVN ALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC
Sbjct: 61  LTEEE-GKPTFNFKEYMIQKGNSVNHALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120

Query: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180
           IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL
Sbjct: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180

Query: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240
           AGDALLAFAFEH+AVSTIGVAPPRIVRAIGELAKSIG+EGLVAGQVVDINSEGAADAGL+
Sbjct: 181 AGDALLAFAFEHIAVSTIGVAPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLE 240

Query: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300
           QLEFIHLHKTAALLEAAVVLGAILGGGSNE+VEKLRNFARYIGLLFQVVDDILDVTKSSN
Sbjct: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDVTKSSN 300

Query: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA 360
           ELGKTAGKDLVADKV YPKLMGIEKSREFAQKLNRDAQDQLSGFDP KAAPLIALANYIA
Sbjct: 301 ELGKTAGKDLVADKVAYPKLMGIEKSREFAQKLNRDAQDQLSGFDPDKAAPLIALANYIA 360

Query: 361 YRQN 365
           YRQN
Sbjct: 361 YRQN 363

[Close]

BLAST of Cp4.1LG16g00240 vs. NCBI nr
Match: gi|510379497|gb|AGN48013.1| (geranylgeranyl pyrophosphate synthase [Cucumis melo])

HSP 1 Score: 642.5 bits (1656), Expect = 4.4e-181
Identity = 335/364 (92.03%), Postives = 350/364 (96.15%), Query Frame = 1


Query: 1   MSAVSLAASLQSCSIFTQACRSSCFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60
           MSA+SL  S QSCSIF+QA RS+ +PLKRG KSF+I ++RL +SSISSLS+ AVL KEET
Sbjct: 1   MSAMSLGTSFQSCSIFSQASRSTGYPLKRGLKSFIIPKRRLPTSSISSLSICAVLTKEET 60

Query: 61  LTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120
           LTEEE GKPTFNFKEYMVQKG SVN ALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC
Sbjct: 61  LTEEE-GKPTFNFKEYMVQKGASVNHALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120

Query: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180
           IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL
Sbjct: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180

Query: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240
           AGDALLAFAFEH+AVSTIGV+PPRIVRAIGELAKSIG+EGLVAGQVVDINSEGAADAGL+
Sbjct: 181 AGDALLAFAFEHIAVSTIGVSPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLE 240

Query: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300
           QLEFIHLHKTAALLEAAVVLGAILGGGSNE+VEKLRNFARYIGLLFQVVDDILDVTKSSN
Sbjct: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDVTKSSN 300

Query: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA 360
           ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQ+QLSGFDP KAAPLIALANYIA
Sbjct: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQEQLSGFDPDKAAPLIALANYIA 360

Query: 361 YRQN 365
           YRQN
Sbjct: 361 YRQN 363

[Close]

BLAST of Cp4.1LG16g00240 vs. NCBI nr
Match: gi|778670130|ref|XP_011649377.1| (PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 640.2 bits (1650), Expect = 2.2e-180
Identity = 333/364 (91.48%), Postives = 350/364 (96.15%), Query Frame = 1


Query: 1   MSAVSLAASLQSCSIFTQACRSSCFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60
           MSA+SL  S QSCSIF+QA RS+ +PLKRG KSF+I ++RL +SSISSLS+ AVL KEET
Sbjct: 1   MSAMSLGTSFQSCSIFSQASRSTGYPLKRGLKSFIIPKRRLPTSSISSLSICAVLTKEET 60

Query: 61  LTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120
           LTEEE GKPTFNFKEYMVQKG SVN ALDAAVFLREPL+IHEAMRYSLMAGGKRVRPVLC
Sbjct: 61  LTEEE-GKPTFNFKEYMVQKGASVNHALDAAVFLREPLRIHEAMRYSLMAGGKRVRPVLC 120

Query: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180
           IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL
Sbjct: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180

Query: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240
           AGDALLAFAFEH+AVSTIGV+PPRIVRAIGELAKSIG+EGLVAGQVVDINSEGAADAGL+
Sbjct: 181 AGDALLAFAFEHIAVSTIGVSPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLE 240

Query: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300
           QLE+IHLHKTAALLEAAVVLGAILGGGSNE+VEKLRNFARYIGLLFQVVDDILDVTKSSN
Sbjct: 241 QLEYIHLHKTAALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDVTKSSN 300

Query: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA 360
           ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQ+QLSGFDP KAAPLIALANYIA
Sbjct: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQEQLSGFDPDKAAPLIALANYIA 360

Query: 361 YRQN 365
           YRQN
Sbjct: 361 YRQN 363

[Close]

BLAST of Cp4.1LG16g00240 vs. NCBI nr
Match: gi|659116084|ref|XP_008457894.1| (PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic [Cucumis melo])

HSP 1 Score: 640.2 bits (1650), Expect = 2.2e-180
Identity = 334/364 (91.76%), Postives = 349/364 (95.88%), Query Frame = 1


Query: 1   MSAVSLAASLQSCSIFTQACRSSCFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60
           MSA+SL  S QSCSIF+QA RS+ +PLKRG KSF+I ++RL +SSISSLS+ AVL KEET
Sbjct: 1   MSAMSLGTSFQSCSIFSQASRSTGYPLKRGLKSFIIPKRRLPTSSISSLSICAVLTKEET 60

Query: 61  LTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120
           LTEEE GKPTFNFKEYMVQKG SVN ALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC
Sbjct: 61  LTEEE-GKPTFNFKEYMVQKGASVNHALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120

Query: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180
           IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL
Sbjct: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180

Query: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240
           AGDALLAFAFEH+AVSTIGV+PPRIVRAIGELAKSIG+EGLVAGQVVDINSEGAADAGL+
Sbjct: 181 AGDALLAFAFEHIAVSTIGVSPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLE 240

Query: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSN 300
           QLEFIHLHKTAALLEAAVVLGAILGGGSNE+VEKLRNFARYIGLLFQVVDDILDVTKSSN
Sbjct: 241 QLEFIHLHKTAALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDVTKSSN 300

Query: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIALANYIA 360
           ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQ+QL GFDP KAAPLIALANYIA
Sbjct: 301 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQEQLFGFDPDKAAPLIALANYIA 360

Query: 361 YRQN 365
           YRQN
Sbjct: 361 YRQN 363

[Close]

BLAST of Cp4.1LG16g00240 vs. NCBI nr
Match: gi|700206963|gb|KGN62082.1| (Geranyl diphosphate synthase large subunit [Cucumis sativus])

HSP 1 Score: 634.0 bits (1634), Expect = 1.6e-178
Identity = 333/369 (90.24%), Postives = 350/369 (94.85%), Query Frame = 1


Query: 1   MSAVSLAASLQSCSIFTQACRSSCFPLKRGSKSFVISRQRLSSSSISSLSVYAVLAKEET 60
           MSA+SL  S QSCSIF+QA RS+ +PLKRG KSF+I ++RL +SSISSLS+ AVL KEET
Sbjct: 1   MSAMSLGTSFQSCSIFSQASRSTGYPLKRGLKSFIIPKRRLPTSSISSLSICAVLTKEET 60

Query: 61  LTEEEEGKPTFNFKEYMVQKGNSVNRALDAAVFLREPLKIHEAMRYSLMAGGKRVRPVLC 120
           LTEEE GKPTFNFKEYMVQKG SVN ALDAAVFLREPL+IHEAMRYSLMAGGKRVRPVLC
Sbjct: 61  LTEEE-GKPTFNFKEYMVQKGASVNHALDAAVFLREPLRIHEAMRYSLMAGGKRVRPVLC 120

Query: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180
           IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL
Sbjct: 121 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 180

Query: 181 AGDALLAFAFEHVAVSTIGVAPPRIVRAIGELAKSIGSEGLVAGQVVDINSEGAADAGLQ 240
           AGDALLAFAFEH+AVSTIGV+PPRIVRAIGELAKSIG+EGLVAGQVVDINSEGAADAGL+
Sbjct: 181 AGDALLAFAFEHIAVSTIGVSPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLE 240

Query: 241 QLEFIHLHKTAALL-----EAAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDV 300
           QLE+IHLHKTAALL     EAAVVLGAILGGGSNE+VEKLRNFARYIGLLFQVVDDILDV
Sbjct: 241 QLEYIHLHKTAALLEAAGGEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDV 300

Query: 301 TKSSNELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQDQLSGFDPQKAAPLIAL 360
           TKSSNELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQ+QLSGFDP KAAPLIAL
Sbjct: 301 TKSSNELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQEQLSGFDPDKAAPLIAL 360

Query: 361 ANYIAYRQN 365
           ANYIAYRQN
Sbjct: 361 ANYIAYRQN 368

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g00240 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GGPPS_HEVBR	2.5e-144	72.00	Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis GN=GG...	[more]
GGPPS_CATRO	1.4e-137	72.73	Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Catharanthus roseus GN=G...	[more]
GGPP1_ARATH	1.8e-134	72.96	Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplast...	[more]
GGPPS_SINAL	2.1e-130	70.62	Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis al...	[more]
GGPPS_CAPAN	7.4e-128	66.31	Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum annuum GN=GGPS1...	[more]

BLAST of Cp4.1LG16g00240 vs. TrEMBL


Match Name	E-value	Identity	Description
W6CYI2_CITLA	1.6e-185	94.23	Geranylgeranyl diphosphate synthase OS=Citrullus lanatus GN=GGPS PE=2 SV=1	[more]
T1RR58_CUCME	3.1e-181	92.03	Geranylgeranyl pyrophosphate synthase OS=Cucumis melo GN=GGPS PE=3 SV=1	[more]
A0A0A0LMU2_CUCSA	1.1e-178	90.24	Geranyl diphosphate synthase large subunit OS=Cucumis sativus GN=Csa_2G296070 PE...	[more]
D6BCR2_CORAV	1.6e-153	78.19	Geranylgeranyl diphosphate synthase OS=Corylus avellana GN=GGPPS PE=2 SV=1	[more]
C4NAM8_HUMLU	3.9e-152	78.49	Geranyl diphosphate synthase large subunit OS=Humulus lupulus PE=2 SV=1	[more]

BLAST of Cp4.1LG16g00240 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G36810.1	1.0e-135	72.96	geranylgeranyl pyrophosphate synthase 1	[more]
AT2G18620.1	1.6e-128	74.45	Terpenoid synthases superfamily protein	[more]
AT3G14550.1	2.2e-117	64.66	geranylgeranyl pyrophosphate synthase 3	[more]
AT3G14530.1	2.2e-117	63.13	Terpenoid synthases superfamily protein	[more]
AT3G29430.1	3.4e-115	61.66	Terpenoid synthases superfamily protein	[more]

BLAST of Cp4.1LG16g00240 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|584300514\|gb\|AHI88418.1\|	2.3e-185	94.23	geranylgeranyl diphosphate synthase [Citrullus lanatus]	[more]
gi\|510379497\|gb\|AGN48013.1\|	4.4e-181	92.03	geranylgeranyl pyrophosphate synthase [Cucumis melo]	[more]
gi\|778670130\|ref\|XP_011649377.1\|	2.2e-180	91.48	PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic isoform X1 [Cucu...	[more]
gi\|659116084\|ref\|XP_008457894.1\|	2.2e-180	91.76	PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic [Cucumis melo]	[more]
gi\|700206963\|gb\|KGN62082.1\|	1.6e-178	90.24	Geranyl diphosphate synthase large subunit [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0008299	isoprenoid biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR017446	Polyprenyl synthetase-related
IPR008949	Isoprenoid_synthase_dom_sf
IPR000092	Polyprenyl_synt

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006694	steroid biosynthetic process
biological_process	GO:0016114	terpenoid biosynthetic process
biological_process	GO:0008299	isoprenoid biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005622	intracellular
molecular_function	GO:0004161	dimethylallyltranstransferase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0004311	farnesyltranstransferase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g00240.1	Cp4.1LG16g00240.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000092	Polyprenyl synthetase	PFAM	PF00348	polyprenyl_synt	coord: 100..333 score: 2.0
IPR000092	Polyprenyl synthetase	PROSITE	PS00444	POLYPRENYL_SYNTHASE_2	coord: 282..294 scor
IPR000092	Polyprenyl synthetase	PROSITE	PS00723	POLYPRENYL_SYNTHASE_1	coord: 149..165 scor
IPR008949	Isoprenoid synthase domain	GENE3D	G3DSA:1.10.600.10		coord: 71..363 score: 3.1E
IPR008949	Isoprenoid synthase domain	unknown	SSF48576	Terpenoid synthases	coord: 74..345 score: 1.77
IPR017446	Polyprenyl synthetase-related	PANTHER	PTHR12001	GERANYLGERANYL PYROPHOSPHATE SYNTHASE	coord: 37..364 score: 4.3E
None	No IPR available	PANTHER	PTHR12001:SF52	GERANYLGERANYL PYROPHOSPHATE SYNTHASE 10, MITOCHONDRIAL-RELATED	coord: 37..364 score: 4.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG16g00240	Cucsa.250460	Cucumber (Gy14) v1	cgycpeB0665
Cp4.1LG16g00240	CmaCh20G011160	Cucurbita maxima (Rimu)	cmacpeB565
Cp4.1LG16g00240	CmoCh20G011480	Cucurbita moschata (Rifu)	cmocpeB517
Cp4.1LG16g00240	Cla020121	Watermelon (97103) v1	cpewmB290
Cp4.1LG16g00240	Cla008507	Watermelon (97103) v1	cpewmB284
Cp4.1LG16g00240	Csa2G296070	Cucumber (Chinese Long) v2	cpecuB268
Cp4.1LG16g00240	MELO3C020952	Melon (DHL92) v3.5.1	cpemeB259
Cp4.1LG16g00240	ClCG02G013430	Watermelon (Charleston Gray)	cpewcgB257
Cp4.1LG16g00240	CSPI02G15060	Wild cucumber (PI 183967)	cpecpiB270
Cp4.1LG16g00240	Lsi10G006550	Bottle gourd (USVL1VR-Ls)	cpelsiB222
Cp4.1LG16g00240	MELO3C007490.2	Melon (DHL92) v3.6.1	cpemedB330
Cp4.1LG16g00240	MELO3C020952.2	Melon (DHL92) v3.6.1	cpemedB304
Cp4.1LG16g00240	CsaV3_2G017600	Cucumber (Chinese Long) v3	cpecucB0335
Cp4.1LG16g00240	CsaV3_6G042470	Cucumber (Chinese Long) v3	cpecucB0366
Cp4.1LG16g00240	Bhi10G001860	Wax gourd	cpewgoB0356
Cp4.1LG16g00240	CsGy6G026700	Cucumber (Gy14) v2	cgybcpeB774
Cp4.1LG16g00240	CsGy2G015050	Cucumber (Gy14) v2	cgybcpeB194
Cp4.1LG16g00240	Carg27066	Silver-seed gourd	carcpeB1445
Cp4.1LG16g00240	Carg05263	Silver-seed gourd	carcpeB1132

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG16g00240	Cp4.1LG19g11640	Cucurbita pepo (Zucchini)	cpecpeB295

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG16g00240	Cucurbita pepo (Zucchini)	cpecpeB068
Cp4.1LG16g00240	Cucurbita pepo (Zucchini)	cpecpeB313
Cp4.1LG16g00240	Cucurbita maxima (Rimu)	cmacpeB623
Cp4.1LG16g00240	Cucurbita maxima (Rimu)	cmacpeB629
Cp4.1LG16g00240	Cucurbita maxima (Rimu)	cmacpeB660
Cp4.1LG16g00240	Cucurbita moschata (Rifu)	cmocpeB573
Cp4.1LG16g00240	Cucurbita moschata (Rifu)	cmocpeB578
Cp4.1LG16g00240	Silver-seed gourd	carcpeB0560
Cp4.1LG16g00240	Silver-seed gourd	carcpeB1472
Cp4.1LG16g00240	Silver-seed gourd	carcpeB1474