Cp4.1LG16g00020 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG16g00020
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLimonene synthase
LocationCp4.1LG16 : 978092 .. 985385 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TACTTCTGTTGTTCGGCGGTCTGCAAATTACCAACCTCCTATCTGGAAGCATGAGTTTGTTGAATCGCTAACGAGTGAATTCACGGTAATGTGTCGATATAATTTAGTTTGTATATTAAGAATATGTTTTCTCGAATTGTTTTTCACCTAAACTCACAACAAAGTCATTATTTAATTTCAAGGAGAGAAAAGTTTAAATAAAAGAGATATACTAAAAAGAAGAGCGAAAATGATGTTGAACAAAGAATTATTATTGGAGGGAGATAGTTTGAGACAATTGGAGCTAGTGGATGAATGAACTACAACGATTGGATTGTCATATCACTTCCAAATAGAAATAAATCAAATATTAGAGAATATGAATGAAAAGTTCCGAAATGGAAAGGATTTAGAGTGGAACAACAACTTATATGCCACCGCTCTTCATTTTAGGATTTTAAGGCAACATGGGTATTATATCCCCCAAGGTAACCCAATTCTTTTTCAAATTCCATTTTGTTGATTTTTTTTTAATTTTTTTAAATCCCGTTCTCTCGAATAATGTTTCTATATGTAGAGGTCTTCCAGAAGTTTAATGATGAGTTAGAAAGTTCTAAGAGTATTTCTTAAGAGAAAGGTAAGGGAATATTATCCTACGAAGCTTCATTTTTAGACATTTTGTCATCCAACATCTATCAAAATACCTTAAATCGAGTGGTGATGAAATAATTTGTACTATGATAAGGCATGCTCTCGAACTCCCATTTTATTGGAGAATGTCAAAATTGGGGGTTAGATGGTTCATCGATTTGTATCGAAGAAAATTCAAACCAAATTCCGTGTTGTTAGATTTGGCCACGTTAGATTTCAATATTGTCTAATCCACACATCAAGATGATCTGAAATATGCCTCCCGATAATAAGTTTAATTATCAATTTGAAAGGGTTATTTTTAAAAAGAAAATATAATCTACTAAGTCTTTCCCGATCCAACTTTTAAGTTATATTTATACTATTTTTCACCATATTCTTTTTTAAACAATGAACCTAATATAGTGTATTAGTTTATTTGGTATATATGAAGGTGGTGGAAGAGTACATAGCTTAGACAAAAACTTCATTTTCCGAGGGATAGATGGATGACAAATTTCTTTTGGTAAGTGGGAATGGGATGCAAACCTCAGCTCCGATGTCTTAAAAGAATGTCCACAAAAATTACTTCATTAGTAACAATAATTGATGATGTTTATGACGTACATGGAACTTTGAATGAACGTGAACTCTTCACTGGTGCTCTCGAGAGGTAACTTCTACCCATTAAATCGAACCAAATTTAATAAAAAAAACATGAAAAAAGTTTTACAAAGACAAACTATTTGTGTTCAAAGTTGTCATAGTTAATAAAAGAAGGTATTCTTCAACAAATGATTATATGTTGATACTTTTAGATGGGATGTTGTCGCAATTGATTCATTGCCTAACTACATGAAGATATGTTTTTTTGCTCTCCATAACACCATCAACGATATGACCTTCGATGCTGTTAAGAATCATGGAGTCAAAGTCATTCAGTATTTAAGAAAAATGGTAAATATTTTTTCATTCGATTTAATTTTATGCTAATCAATTTTTTTTTTTTTGGCTAAGATAATTTTATGAAACCCTAACTCCTTCAACATTTAAAATGTTGTAGTGGATAGATTTATGCAAAAGGTTCTTGATAGAGGCAAGATGACACTACACCAATTATAAGCCAACAATTCAATAGTATTTAGACAATGTATGGATTTCAGTATCGGGATCTCTTCTTCTCGTTCATGCTTACGTCTTTGCTACAGACTCAATAATGAAAGTGGATTTGGAATACTTGGAACTCTATCCTGATATTCTTCGACATTCTTCCATGATCTTTCGTCTTACCAATGACTTAGCTTCATCATTGGTATTTCTTTTAAAATAAAATTCTTCATGCAATTAATTTCCTAATTTTCGAACATGTGGACGAATAACACTAATATTGAAAATTTTCTAATTCACATGATGAAGCAGAGAGAGGTGAAGTTGCTAAGTCTCTCCAATGTTACATGAATGACACAGGTGCCTCTGAACATGAAGCATGAACATATATAAAGGATTTGATTATCGAGTCGTGGAAGAAATTGAATGAATTTCTCACATAGTCTACCAACATAGAGATGGACACACTGTGGAAGATCAAGAAACCAAAGATCGTGTCTCATCTTTATTCATCAATTCTACATAGAATCATACATATTGACAACAAATATTATATATTGTTTAATGATGGTTTATTTAGAGAAATTTTGAGAGAAAAAATAGCATAAAATAAATTTAAAAGTGTAACGTCGGCTTCTAAAATATGATTAGATTATGACTATTCTTACATGCATATTACGAAAATCTTTTGAAGTGGAAAACCCGCCATTATTTTATATAAAACATGCTTGCAAAACAACAAAAGAATGAGAAAATTTTATGTCCAAACAAAATTCTATTTGAAATATCCTATGATGTTTGTAGCAAACATCTAGTAAGTGACTCTATGAGCATGTACACAAAACCCTAGAAGCATGTATAATGCACTCTAGGCAAGCAAACTAGAAAGTCTAAACAAGCTTCAAATTGTCTAGAACTCATTCATGTTGATTTATGTTGCCAATTCAAACAAAATCTTTACGTAGAAATATTTATTTTTTTACTATTTATTGATGACTATAGTTGCATGAGTTGAGTTTACTTTCTACGACATAGGTCAGAAACCTGGGAGAAATTCTAAAATTTTAAAGCTATGATGGAGGATCAAAATGGCTTCCACATTAAAGTTCTTCGCACAAATAGATGTGTGGAGTTCATGTCTAAAGAATTCGATTTGTTTTGTGCAGGAAAAGACAACCAAAGGGAGTCAACATCTCCTTACACTCCATAACAAAATGGTGAATCGCTGAATGAAATGGAACTGTTGTGGAGATGGCAAGAAATATCTTACAAGCAGGGGGACTTACAAACCAATTTCGGGTAGAAGCTTTAGCGATATGTATCTATCTATTAAATTGAACTCCTTATAAAGCACGAAAGAAATCATCTATAAGTCATTTACAAGTCTTTGATTGTGTAGTTTATGCTTTGATAAATCCTCAAGTTCATCAAAAGTTTGATGAAAAATCTGAAAAATGCATTTTCTTTGGTAATCAAAAGCATACAAATTGTATTACCCTCCTAATGAAAAGACTTTAAACTGTGTAATATTGGATGAAAATGTAACTTGCAATTGGAGTAAAGAACCAGAGCACCAAGATACAATAGTCAAACCCCTATGCATCTTCTAGTACCTCTAATACAACACAAAATTTTATAAATTTATCAACTTTCATTATCGCAAAAAAACTTTTCTCTTAAAAAATTTTCAAACAAGACACGGCTAAGGACGTATAAATCTTTAACTGACATATATGCATCTTGTAAATTTGCTATTAATGTTTCAAACACTATAAATTATAAAGAAGCAACTAAAAAACAAGAGTGGTAGAAAACCATGATAAAAGAGATGTAGACCATTGAAAAAGATGAAACATGAGAGAGGATTGATTTACCAAATCAAAAAAAATTGCAAACACATTTGAACCAAATGAAAGTATAAAAAAGCATAAGGCTTATCTTGTGGGTAGAGGGTATATGTAACAACAAGGTGTATCTTAGTAGCTCACTTAGAAATTGTAAGAACTATTTGAGTATTAGCGGCAGAATTGCGGTGACCTCTTTATCTGTTTGATGTCAAGTCTGCATTTCTTAATGGAGATTTACAAGAAGAGATCTATGTAGCACAAACAGAGGATTCATAAAGAAAGACAAATAAACAAAAATATACCAGTTGAGAAAGACATTATATGGATTAAGGCTAGCTCCTCGAGCTTGGTGTAGCAAGATCGATGGATATTTTGAAGAAAAATGTTACAAGTAAAGTGAGAATGAGTCTAGTTTGCATGTGAAGAGGAAAGGCAAAAGTGATTTCATCATTATTTGCCTCTTTGTTGACGATATCATTTATTCTAGCTCTTGTAACTCTCTTTTAGAAAAATTACGTCTCAAATGGTGAGTAAATTTGAGATGTCAAATATGGGTTTAATCCGTTATTTTCTTGGTATTGAAGTATATCAAGTTCAAGATGAAATTTTTATTTCCCAAAAGAAAGTTGTCAAAGATATTATGAGTAAATTTAGTATGCTTAGTTGTAATCCTACCACCACACCCATGAATATTAATGAGAAAATTACAACATGAAGATGGAGTACAAATGACGGATAGTAGATGGTTTAGAAGCTTGGTTGGCGGATTGATTTACTTAATGCACAATAGGATGTTGCATTTCCTATTGGTGTTATTTCCAAACTTAGATAACTGCCTCAAAAGTTCGTTGTGGAGAAGCAAAATGGGCCTTACTAATTTTTTCACTCTAAGATCAGGAGTTATCACTTGGAGATCAAAAAAGTAAGCAACAGTGGCGTTGTCAACTTCATATGCAAAATATATTGCAACAGATCCAAGAGTGTGTCAAGCCATTTGGTTAAAAAGAGTGCTAGTTGATCTACAACAAAAGCAAAAAATAAAAAAAGCAATAGAGATATTTTGTGGTAACAAAGCAACTATCTCGATGACAAAAAACCCAACATTTCATAGTAGAACAAAATATATTAGATTTCGACATCCTCATATTCCTAATCTTGTTGCATAAATATAAAAAACTAAATTACCAAAATACCCGAGNAGTATATGCACTTCATTTTCTTTCTTTGTTTATTTTCTATGGCAATTTTAGTATCAAACAAATGGTATACTTTGTTCGAGGGTTCCAGAAAAGGAGTTGAGTCTCGATTAAGGGGAGGTTAGGGGAAACTCTATGGTGGTTTTTTGTTCTAGGATAGGATTGTTGCGAATTATTGAAGAAAGTAGTCCTACATTGGCTAAGAGAAAGATCATGAGTATATAAGTAAGGAACAACGTCCAATTGTATGAGACCTTTTGGAGAAACTAAAAGTAAAATCTTGAGAGCTTGTGCTCAAAGTGGATAATATCATACCATTGCAGAGGTTCGTGATTCTTAACAAATTTTTCAATGCATGACTACCACATTCTATGGTTCCAATATCGTGTTTAATATTTCGTTTTAAACAAGTCGAGCTTCTTTACTCACAAGGTAAAAAATAAAACGTTTAATTAAAACACAATACTATGCAAATAACGAAGAAGAGAAATCGTGTACAACTGTATGATAGAGAACAATAAATACATGTGTGGTTCTCTTGTCAAACAAGGTGGACGGCATAAAAAGGACATTGACTTGGACCACAAAAAAAAAAGGACATTGGCTCAATGAATCAAAAATTTTATTATTATTATTTTTTTAAGATCCATATTTTTCTTTTTTTTCTTTTTTTTTTCTTTTTTTTTTTTTTTAATCTTGAAATTCCCTCTAGACAAGGAATCAAAAATCGAGAAATTTCTTTAGAAATTGGAAAAACGATAGTCTTTTTGGCTTAAAATACTCAAGTCATGTGCTACTAAAACCATGGAACGGGTGTTAGGGTAGTTGCATTTATCTTATTTTATAGCCGTAGGTTAGATTAGGGCAATGTTTTGTTTTCTAGTTTTAGATATATTGTTTATTCTCGTTTCTTATATGTTTTTGGGGACAGAGAGGTTAGTGAAGTGACGTGGGTAAGTTTTATTTATTTATTTTTTTAAGTAATCATTTTTAGTTATTTATTTATTGATTATTATTATTATTATTATTTTCACGTATATTATTTTTATAATTATCTTTATTTGTTTATTTATTTTTATTTTGTGGGCTATTACATGATGTGACAGTGTTTTAAGATGAAATTTATGTTTTATGATAAAGTCTAAACGCTTATTTTCGCATATAAATGATTACGCTATGATAACAGTAACGACTTTAGGTAATTAGAAATCTAGAATCGTTATATTTAGTGTCTCCTCCACTAATCAATTCATTCTAACAATTCTAACATTTCATTTTGTTAATCCCAATGTGGCAGATAAACGTGTGATAATTTGTGAGTATCAATTTATTTGACGTACAAAATTGGCATACTCTTATTCCCAATTGGAACGACTCGCTCTGCAAAAATCTTAGTCATTCATTTACGAAATCTCAAATATGAAATATTTATAGAATAATTATATATATATACAAAAAAAAAAAATCATAATATATACTTAAATTAATAAATAAATATTTTGTACGTCTCAAATAAATTTAAATGCTTATTATTTTATTACATTGAAATAAATTTAATGTTTTAGTTGCCATTTTATTATAACTTTTTTTAAAAAAAATATATATTTTTCGAAAATTTTTTATGGCCATTCGTTGGGTGATGCCAAAAACATGAATGTGATTCTAATAACTTTAAACTGACACGTTTTTTTTTCCTTTTTTAAGAGTCAAATAAATAATAAAAAAAATTATGAAATTAAAAAAATAAATAATAAATATATGCATAAATAATTATATCTAAGAAAACATATTTTTAAAAATTAATAATAAACTAGGGTTGATTCAGCTCAATCTAATCTAATTTTAAGCCGACTAATGAATCAATTCAGAGTTTAACTCAAAATGTATAGATTGGATTACCGAATATTTATTTATTTATTTGGAAGATCTCATATTTAAAAATGAGAAATTTAATGTATAAAAGGAATACACTTCTTTCACTTTGCACACCAACAAACTTCTTCTCATTCTAACTTTTATGCTTTTTTTTTTCTAAATGCTTAGGGTATCGACGTTGGATAGAAAAGCTTACGAAAATTTTGTTGATCGGAGATCGGCAAATTACAGACCTCCTATTTGGAAGCATGAGTTTGTTGACTCGTTAACGAGTGAATTCAGGGTAATGTGTTGAGCTAATTTATTTTTTATTTTATCGGTATCTTTTCTCAAACTATTTTTCACTTATTTATCCACAATAAATTCCTTATTTAATTTCAGGAAGAGAAGAGTTTAAATAGAAGAGATATTCTGAAAAGAACCGTGAAAATGATGCTCAATAGAGAATTATTATTGGATGGAGATAGTTTAAGACAATTGGAGCTAGTCGACCAACTACAAAGGTTGGGATTGTCATATCACTTTCAAACAGAAATAAATCAAATATTAGAGAATATGAATGAAAAGTTCCAGAACCGAAAGGATTTAGAATGGAACAACGACTTATATGCCACGTCTCTTCATTTTAGGATTTTAAGGCAACATGGCTATTACATCCCT

mRNA sequence

TACTTCTGTTGTTCGGCGGTCTGCAAATTACCAACCTCCTATCTGGAAGCATGAGTTTGTTGAATCGCTAACGAGTGAATTCACGAATATGTTTTCTCGAATTGTTTTTCACCTAAACTCACAACAAAGAGAGAAAAGTTTAAATAAAAGAGATATACTAAAAAGAAGAGCGAAAATGATGTTGAACAAAGAATTATTATTGGAGGGAGATAGTTTGAGACAATTGGAGCTAAATATGAATGAAAAGTTCCGAAATGGAAAGGATTTAGAGTGGAACAACAACTTATATGCCACCGCTCTTCATTTTAGGATTTTAAGGCAACATGGGTATTATATCCCCCAAGAGAAGAGTTTAAATAGAAGAGATATTCTGAAAAGAACCGTGAAAATGATGCTCAATAGAGAATTATTATTGGATGGAGATAGTTTAAGACAATTGGAGCTAGTCGACCAACTACAAAGGTTGGGATTGTCATATCACTTTCAAACAGAAATAAATCAAATATTAGAGAATATGAATGAAAAGTTCCAGAACCGAAAGGATTTAGAATGGAACAACGACTTATATGCCACGTCTCTTCATTTTAGGATTTTAAGGCAACATGGCTATTACATCCCT

Coding sequence (CDS)

ATGTTTTCTCGAATTGTTTTTCACCTAAACTCACAACAAAGAGAGAAAAGTTTAAATAAAAGAGATATACTAAAAAGAAGAGCGAAAATGATGTTGAACAAAGAATTATTATTGGAGGGAGATAGTTTGAGACAATTGGAGCTAAATATGAATGAAAAGTTCCGAAATGGAAAGGATTTAGAGTGGAACAACAACTTATATGCCACCGCTCTTCATTTTAGGATTTTAAGGCAACATGGGTATTATATCCCCCAAGAGAAGAGTTTAAATAGAAGAGATATTCTGAAAAGAACCGTGAAAATGATGCTCAATAGAGAATTATTATTGGATGGAGATAGTTTAAGACAATTGGAGCTAGTCGACCAACTACAAAGGTTGGGATTGTCATATCACTTTCAAACAGAAATAAATCAAATATTAGAGAATATGAATGAAAAGTTCCAGAACCGAAAGGATTTAGAATGGAACAACGACTTATATGCCACGTCTCTTCATTTTAGGATTTTAAGGCAACATGGCTATTACATCCCT

Protein sequence

MFSRIVFHLNSQQREKSLNKRDILKRRAKMMLNKELLLEGDSLRQLELNMNEKFRNGKDLEWNNNLYATALHFRILRQHGYYIPQEKSLNRRDILKRTVKMMLNRELLLDGDSLRQLELVDQLQRLGLSYHFQTEINQILENMNEKFQNRKDLEWNNDLYATSLHFRILRQHGYYIP
Homology
[Close]
BLAST of Cp4.1LG16g00020 vs. Swiss-Prot
Match: CIN2_ARATH (1,8-cineole synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS23 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.5e-12
Identity = 43/90 (47.78%), Postives = 59/90 (65.56%), Query Frame = 1 

Query: 86  EKSLNRRDILKRTVKMMLNRELLLDGDSLRQLELVDQLQRLGLSYHFQTEINQILENMNE 145
           E  +  RD+LK+ VK ML+ E       L QLEL+D LQ+LG+SYHF+ EIN  L +++ 
Sbjct: 72  ETEVITRDVLKKKVKSMLDDE---KKSRLEQLELIDDLQKLGVSYHFEIEINDTLTDLHL 131

Query: 146 KF-QNRKDLEWNNDLYATSLHFRILRQHGY 175
           K  +N    +   DL+ATSL FR+LRQHG+
Sbjct: 132 KMGRNCWKCDKEEDLHATSLEFRLLRQHGF 158

[Close]
BLAST of Cp4.1LG16g00020 vs. Swiss-Prot
Match: CIN1_ARATH (1,8-cineole synthase 1, chloroplastic OS=Arabidopsis thaliana GN=TPS27 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.5e-12
Identity = 43/90 (47.78%), Postives = 59/90 (65.56%), Query Frame = 1 

Query: 86  EKSLNRRDILKRTVKMMLNRELLLDGDSLRQLELVDQLQRLGLSYHFQTEINQILENMNE 145
           E  +  RD+LK+ VK ML+ E       L QLEL+D LQ+LG+SYHF+ EIN  L +++ 
Sbjct: 72  ETEVITRDVLKKKVKSMLDDE---KKSRLEQLELIDDLQKLGVSYHFEIEINDTLTDLHL 131

Query: 146 KF-QNRKDLEWNNDLYATSLHFRILRQHGY 175
           K  +N    +   DL+ATSL FR+LRQHG+
Sbjct: 132 KMGRNCWKCDKEEDLHATSLEFRLLRQHGF 158

[Close]
BLAST of Cp4.1LG16g00020 vs. Swiss-Prot
Match: ATESY_VITVI ((-)-alpha-terpineol synthase OS=Vitis vinifera PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.3e-12
Identity = 45/92 (48.91%), Postives = 58/92 (63.04%), Query Frame = 1 

Query: 86  EKSLNRRDILKRTVKMMLNRELLLDGDSLRQLELVDQLQRLGLSYHFQTEINQILENMNE 145
           E    R D LKR VK ML +        L QLEL+D LQRLG+ YHF+ EI +IL  +  
Sbjct: 74  ETYTRRLDKLKRDVKPMLGKVK----KPLDQLELIDVLQRLGIYYHFKDEIKRILNGIYN 133

Query: 146 KFQNRKDLEWNNDLYATSLHFRILRQHGYYIP 178
           ++ NR +    +DLYAT+L FR+LRQHGY +P
Sbjct: 134 QY-NRHEEWQKDDLYATALEFRLLRQHGYDVP 160

[Close]
BLAST of Cp4.1LG16g00020 vs. Swiss-Prot
Match: TPS3_SOLLC ((-)-camphene/tricyclene synthase, chloroplastic OS=Solanum lycopersicum GN=TPS3 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.6e-12
Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = 1 

Query: 79  HGYYIPQEKSLNRRDILKRTVKMMLNRELLLDGDSLRQLELVDQLQRLGLSYHFQTEINQ 138
           H +++  EK + R + LK  +K  L   L  +   L +LEL+D LQRLG+SYHF+ EI Q
Sbjct: 76  HNHHVG-EKYMKRFNELKAEMKKHLMMMLHEESQELEKLELIDNLQRLGVSYHFKDEIIQ 135

Query: 139 ILENMNEKFQNRKDLEWNNDLYATSLHFRILRQHGYYI 177
           IL ++++  Q+  +    N LY T+L FRILRQHG+YI
Sbjct: 136 ILRSIHD--QSSSEATSANSLYYTALKFRILRQHGFYI 170

[Close]
BLAST of Cp4.1LG16g00020 vs. Swiss-Prot
Match: TPS03_ARATH (Tricyclene synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS03 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 7.3e-12
Identity = 50/111 (45.05%), Postives = 66/111 (59.46%), Query Frame = 1 

Query: 76  LRQHGYYIP------QEKSLNRRDILKRTVKMMLNRELLLDGDSLRQLELVDQLQRLGLS 135
           L QH Y +       +E ++ R  +LK+ V  MLN    L    L QLEL+D LQRLG+S
Sbjct: 35  LWQHEYLLSLGNTYVKEDNVERVTLLKQEVSKMLNETEGL----LEQLELIDTLQRLGVS 94

Query: 136 YHFQTEINQILENMNEK----FQNRKDLEWNNDLYATSLHFRILRQHGYYI 177
           YHF+ EI + L N++ K     +NR D     DLYAT+L FR+LRQHG+ I
Sbjct: 95  YHFEQEIKKTLTNVHVKNVRAHKNRIDRNRWGDLYATALEFRLLRQHGFSI 141

[Close]
BLAST of Cp4.1LG16g00020 vs. TrEMBL
Match: A0A0A0LMW7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G299870 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.4e-23
Identity = 63/95 (66.32%), Postives = 79/95 (83.16%), Query Frame = 1 

Query: 86  EKSLNRRDILKRTVKMMLNRELLLDGDSLRQLELVDQLQRLGLSYHFQTEINQILENMNE 145
           ++ LNRR++L R VKMMLN ELL+D DSL+ LE VD+LQRLG+SYHF+ EINQ+LE +NE
Sbjct: 77  DRCLNRREVLIRRVKMMLNEELLVD-DSLKGLEFVDELQRLGISYHFEMEINQLLEMINE 136

Query: 146 KFQNRKD-LEWNND--LYATSLHFRILRQHGYYIP 178
           +F N ++ LE NN+  LYA SLHFRILRQHGY+IP
Sbjct: 137 RFNNGEEGLERNNNKSLYAISLHFRILRQHGYHIP 170

[Close]
BLAST of Cp4.1LG16g00020 vs. TrEMBL
Match: A0A0A0LMW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G299330 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.9e-20
Identity = 57/80 (71.25%), Postives = 70/80 (87.50%), Query Frame = 1 

Query: 101 MMLNRELLLDGDSLRQLELVDQLQRLGLSYHFQTEINQILENMNEKFQNRKD-LEWNND- 160
           MMLN+E L+ GDSL+ LE+VD+LQRLG+SYHFQ EINQ+LE +NE+F N ++ LEWNN+ 
Sbjct: 1   MMLNKEPLV-GDSLKGLEVVDELQRLGISYHFQMEINQMLEIINERFNNGEEGLEWNNNK 60

Query: 161 -LYATSLHFRILRQHGYYIP 178
            LYATSLHFRILRQHGY+IP
Sbjct: 61  SLYATSLHFRILRQHGYHIP 79

[Close]
BLAST of Cp4.1LG16g00020 vs. TrEMBL
Match: F6I5S8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g03790 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.3e-12
Identity = 45/83 (54.22%), Postives = 57/83 (68.67%), Query Frame = 1 

Query: 95  LKRTVKMMLNRELLLDGDSLRQLELVDQLQRLGLSYHFQTEINQILENMNEKFQNRKDLE 154
           LK  VKMML +     G+ L QLEL+D LQRLG+ YHF  EI +IL ++   + NR D  
Sbjct: 88  LKGDVKMMLGQV----GEPLHQLELIDTLQRLGIHYHFGEEIKRILHSIYNNY-NRNDTW 147

Query: 155 WNNDLYATSLHFRILRQHGYYIP 178
            N DLYAT+L FR+LRQHGY++P
Sbjct: 148 KNGDLYATALEFRLLRQHGYHVP 165

[Close]
BLAST of Cp4.1LG16g00020 vs. TrEMBL
Match: B9S8A3_RICCO ((R)-limonene synthase, putative OS=Ricinus communis GN=RCOM_1733650 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.9e-12
Identity = 49/92 (53.26%), Postives = 62/92 (67.39%), Query Frame = 1 

Query: 86  EKSLNRRDILKRTVKMMLNRELLLDGDSLRQLELVDQLQRLGLSYHFQTEINQILENMNE 145
           E    R + LK++VK MLN  ++     L QLEL+D LQRLGL+YHFQ EIN+IL N+  
Sbjct: 4   ESYTKRINHLKKSVKTMLNEAVI----PLDQLELIDTLQRLGLAYHFQDEINKILNNI-- 63

Query: 146 KFQNRKDLEW-NNDLYATSLHFRILRQHGYYI 177
             QNR +  W   DL+AT+L FR+LRQHGY I
Sbjct: 64  YIQNRFEKTWTKEDLHATALQFRLLRQHGYNI 89

[Close]
BLAST of Cp4.1LG16g00020 vs. TrEMBL
Match: F6I5T0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g00060 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.9e-12
Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 1 

Query: 95  LKRTVKMMLNRELLLDGDSLRQLELVDQLQRLGLSYHFQTEINQILENMNEKFQNRKDLE 154
           LK  VK+ML +     G+ L QLEL+D LQRLG+ YHF  EI +IL ++   + NR D  
Sbjct: 88  LKGDVKIMLGQV----GEPLHQLELIDTLQRLGIHYHFGEEIKRILHSIYNNY-NRNDTW 147

Query: 155 WNNDLYATSLHFRILRQHGYYIP 178
            N DLYAT+L FR+LRQHGY++P
Sbjct: 148 KNGDLYATALEFRLLRQHGYHVP 165

[Close]
BLAST of Cp4.1LG16g00020 vs. TAIR10
Match: AT3G25830.1 (AT3G25830.1 terpene synthase-like sequence-1,8-cineole)

HSP 1 Score: 73.6 bits (179), Expect = 1.4e-13
Identity = 43/90 (47.78%), Postives = 59/90 (65.56%), Query Frame = 1 

Query: 86  EKSLNRRDILKRTVKMMLNRELLLDGDSLRQLELVDQLQRLGLSYHFQTEINQILENMNE 145
           E  +  RD+LK+ VK ML+ E       L QLEL+D LQ+LG+SYHF+ EIN  L +++ 
Sbjct: 72  ETEVITRDVLKKKVKSMLDDE---KKSRLEQLELIDDLQKLGVSYHFEIEINDTLTDLHL 131

Query: 146 KF-QNRKDLEWNNDLYATSLHFRILRQHGY 175
           K  +N    +   DL+ATSL FR+LRQHG+
Sbjct: 132 KMGRNCWKCDKEEDLHATSLEFRLLRQHGF 158

[Close]
BLAST of Cp4.1LG16g00020 vs. TAIR10
Match: AT3G25820.1 (AT3G25820.1 terpene synthase-like sequence-1,8-cineole)

HSP 1 Score: 73.6 bits (179), Expect = 1.4e-13
Identity = 43/90 (47.78%), Postives = 59/90 (65.56%), Query Frame = 1 

Query: 86  EKSLNRRDILKRTVKMMLNRELLLDGDSLRQLELVDQLQRLGLSYHFQTEINQILENMNE 145
           E  +  RD+LK+ VK ML+ E       L QLEL+D LQ+LG+SYHF+ EIN  L +++ 
Sbjct: 72  ETEVITRDVLKKKVKSMLDDE---KKSRLEQLELIDDLQKLGVSYHFEIEINDTLTDLHL 131

Query: 146 KF-QNRKDLEWNNDLYATSLHFRILRQHGY 175
           K  +N    +   DL+ATSL FR+LRQHG+
Sbjct: 132 KMGRNCWKCDKEEDLHATSLEFRLLRQHGF 158

[Close]
BLAST of Cp4.1LG16g00020 vs. TAIR10
Match: AT4G16740.1 (AT4G16740.1 terpene synthase 03)

HSP 1 Score: 72.0 bits (175), Expect = 4.1e-13
Identity = 50/111 (45.05%), Postives = 66/111 (59.46%), Query Frame = 1 

Query: 76  LRQHGYYIP------QEKSLNRRDILKRTVKMMLNRELLLDGDSLRQLELVDQLQRLGLS 135
           L QH Y +       +E ++ R  +LK+ V  MLN    L    L QLEL+D LQRLG+S
Sbjct: 35  LWQHEYLLSLGNTYVKEDNVERVTLLKQEVSKMLNETEGL----LEQLELIDTLQRLGVS 94

Query: 136 YHFQTEINQILENMNEK----FQNRKDLEWNNDLYATSLHFRILRQHGYYI 177
           YHF+ EI + L N++ K     +NR D     DLYAT+L FR+LRQHG+ I
Sbjct: 95  YHFEQEIKKTLTNVHVKNVRAHKNRIDRNRWGDLYATALEFRLLRQHGFSI 141

[Close]
BLAST of Cp4.1LG16g00020 vs. TAIR10
Match: AT3G25810.1 (AT3G25810.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 71.6 bits (174), Expect = 5.4e-13
Identity = 46/104 (44.23%), Postives = 64/104 (61.54%), Query Frame = 1 

Query: 72  HFRILRQHGYYIPQEKSLNRRDILKRTVKMMLNRELLLDGDSLRQLELVDQLQRLGLSYH 131
           H  +L     Y+  EK +  R +LK+ VK ML  E +     L +LEL+D LQ+LG+SYH
Sbjct: 59  HSYLLSIENKYV-NEKEVITRHVLKKKVKKML--EEVETKSRLEKLELIDDLQKLGVSYH 118

Query: 132 FQTEINQILENMN-EKFQNRKDLEWNNDLYATSLHFRILRQHGY 175
           F+ EIN IL N + E  +N    +   DL+AT+L FR+LRQHG+
Sbjct: 119 FEQEINNILTNFHLENGKNIWKCDKEEDLHATALEFRLLRQHGF 159

[Close]
BLAST of Cp4.1LG16g00020 vs. TAIR10
Match: AT2G24210.1 (AT2G24210.1 terpene synthase 10)

HSP 1 Score: 70.1 bits (170), Expect = 1.6e-12
Identity = 40/92 (43.48%), Postives = 62/92 (67.39%), Query Frame = 1 

Query: 85  QEKSLNRRDILKRTVKMMLNRELLLDGDSLRQLELVDQLQRLGLSYHFQTEINQILENMN 144
           ++K +  RD+LK  V+ MLN E       L QLE +D LQ+LG+SYHF+ EI+ IL +  
Sbjct: 70  KDKRVRERDLLKEKVRKMLNDE---QKTYLDQLEFIDDLQKLGVSYHFEAEIDNILTSSY 129

Query: 145 EKFQNRKDLEWNNDLYATSLHFRILRQHGYYI 177
           +K  +R +++  +DL+AT+L FR+ RQHG+ +
Sbjct: 130 KK--DRTNIQ-ESDLHATALEFRLFRQHGFNV 155

[Close]
BLAST of Cp4.1LG16g00020 vs. NCBI nr
Match: gi|778674229|ref|XP_011650164.1| (PREDICTED: myrcene synthase, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 2.2e-24
Identity = 65/95 (68.42%), Postives = 82/95 (86.32%), Query Frame = 1 

Query: 86  EKSLNRRDILKRTVKMMLNRELLLDGDSLRQLELVDQLQRLGLSYHFQTEINQILENMNE 145
           E+ LN+RD+L + VKMMLN+E L+ GDSL+ LE+VD+LQRLG+SYHFQ EINQ+LE +NE
Sbjct: 53  ERCLNQRDMLIKRVKMMLNKEPLV-GDSLKGLEVVDELQRLGISYHFQMEINQMLEIINE 112

Query: 146 KFQNRKD-LEWNND--LYATSLHFRILRQHGYYIP 178
           +F N ++ LEWNN+  LYATSLHFRILRQHGY+IP
Sbjct: 113 RFNNGEEGLEWNNNKSLYATSLHFRILRQHGYHIP 146

[Close]
BLAST of Cp4.1LG16g00020 vs. NCBI nr
Match: gi|659122006|ref|XP_008460927.1| (PREDICTED: terpene synthase 10-like isoform X1 [Cucumis melo])

HSP 1 Score: 117.5 bits (293), Expect = 2.4e-23
Identity = 63/95 (66.32%), Postives = 81/95 (85.26%), Query Frame = 1 

Query: 86  EKSLNRRDILKRTVKMMLNRELLLDGDSLRQLELVDQLQRLGLSYHFQTEINQILENMNE 145
           ++ L RRD+L + VKMMLN+E L+ GDSL+ LE++D+LQRLG+SYHFQ EINQ+LE +NE
Sbjct: 80  DRCLIRRDMLIKRVKMMLNKEPLV-GDSLKGLEVIDELQRLGISYHFQMEINQMLEIINE 139

Query: 146 KFQNRKD-LEWNND--LYATSLHFRILRQHGYYIP 178
           +F N ++ LEWNN+  LYATSLHFRILRQHGY+IP
Sbjct: 140 RFNNGEEGLEWNNNRSLYATSLHFRILRQHGYHIP 173

[Close]
BLAST of Cp4.1LG16g00020 vs. NCBI nr
Match: gi|659122008|ref|XP_008460928.1| (PREDICTED: (-)-alpha-terpineol synthase-like isoform X2 [Cucumis melo])

HSP 1 Score: 117.5 bits (293), Expect = 2.4e-23
Identity = 63/95 (66.32%), Postives = 81/95 (85.26%), Query Frame = 1 

Query: 86  EKSLNRRDILKRTVKMMLNRELLLDGDSLRQLELVDQLQRLGLSYHFQTEINQILENMNE 145
           ++ L RRD+L + VKMMLN+E L+ GDSL+ LE++D+LQRLG+SYHFQ EINQ+LE +NE
Sbjct: 14  DRCLIRRDMLIKRVKMMLNKEPLV-GDSLKGLEVIDELQRLGISYHFQMEINQMLEIINE 73

Query: 146 KFQNRKD-LEWNND--LYATSLHFRILRQHGYYIP 178
           +F N ++ LEWNN+  LYATSLHFRILRQHGY+IP
Sbjct: 74  RFNNGEEGLEWNNNRSLYATSLHFRILRQHGYHIP 107

[Close]
BLAST of Cp4.1LG16g00020 vs. NCBI nr
Match: gi|659122223|ref|XP_008461029.1| (PREDICTED: terpene synthase 10-like [Cucumis melo])

HSP 1 Score: 117.5 bits (293), Expect = 2.4e-23
Identity = 63/95 (66.32%), Postives = 77/95 (81.05%), Query Frame = 1 

Query: 86  EKSLNRRDILKRTVKMMLNRELLLDGDSLRQLELVDQLQRLGLSYHFQTEINQILENMNE 145
           ++  NRR++L R VKMMLN E  L  DSL+ LE+VD+LQRLG+SYHFQ EINQILE +N 
Sbjct: 76  DRCFNRREVLIRRVKMMLNNEESLVDDSLKGLEVVDELQRLGISYHFQMEINQILEIING 135

Query: 146 KFQNRKD-LEWNND--LYATSLHFRILRQHGYYIP 178
           +F N ++ LEWNN+  LYATSLHFRILRQHGY+IP
Sbjct: 136 RFNNGEEGLEWNNNRSLYATSLHFRILRQHGYHIP 170

[Close]
BLAST of Cp4.1LG16g00020 vs. NCBI nr
Match: gi|700206998|gb|KGN62117.1| (hypothetical protein Csa_2G299870 [Cucumis sativus])

HSP 1 Score: 115.2 bits (287), Expect = 1.2e-22
Identity = 63/95 (66.32%), Postives = 79/95 (83.16%), Query Frame = 1 

Query: 86  EKSLNRRDILKRTVKMMLNRELLLDGDSLRQLELVDQLQRLGLSYHFQTEINQILENMNE 145
           ++ LNRR++L R VKMMLN ELL+D DSL+ LE VD+LQRLG+SYHF+ EINQ+LE +NE
Sbjct: 77  DRCLNRREVLIRRVKMMLNEELLVD-DSLKGLEFVDELQRLGISYHFEMEINQLLEMINE 136

Query: 146 KFQNRKD-LEWNND--LYATSLHFRILRQHGYYIP 178
           +F N ++ LE NN+  LYA SLHFRILRQHGY+IP
Sbjct: 137 RFNNGEEGLERNNNKSLYAISLHFRILRQHGYHIP 170

The following BLAST results are available for this feature:
BLAST of Cp4.1LG16g00020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CIN2_ARATH2.5e-1247.781,8-cineole synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS23 PE=1 SV=1[more]
CIN1_ARATH2.5e-1247.781,8-cineole synthase 1, chloroplastic OS=Arabidopsis thaliana GN=TPS27 PE=1 SV=1[more]
ATESY_VITVI4.3e-1248.91(-)-alpha-terpineol synthase OS=Vitis vinifera PE=1 SV=1[more]
TPS3_SOLLC5.6e-1244.90(-)-camphene/tricyclene synthase, chloroplastic OS=Solanum lycopersicum GN=TPS3 ... [more]
TPS03_ARATH7.3e-1245.05Tricyclene synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS03 PE=2 SV=1[more]
BLAST of Cp4.1LG16g00020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMW7_CUCSA8.4e-2366.32Uncharacterized protein OS=Cucumis sativus GN=Csa_2G299870 PE=3 SV=1[more]
A0A0A0LMW4_CUCSA3.9e-2071.25Uncharacterized protein OS=Cucumis sativus GN=Csa_2G299330 PE=3 SV=1[more]
F6I5S8_VITVI1.3e-1254.22Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g03790 PE=3 SV=... [more]
B9S8A3_RICCO3.9e-1253.26(R)-limonene synthase, putative OS=Ricinus communis GN=RCOM_1733650 PE=3 SV=1[more]
F6I5T0_VITVI3.9e-1253.01Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g00060 PE=3 SV=... [more]
BLAST of Cp4.1LG16g00020 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G25830.11.4e-1347.78 terpene synthase-like sequence-1,8-cineole[more]
AT3G25820.11.4e-1347.78 terpene synthase-like sequence-1,8-cineole[more]
AT4G16740.14.1e-1345.05 terpene synthase 03[more]
AT3G25810.15.4e-1344.23 Terpenoid cyclases/Protein prenyltransferases superfamily protein[more]
AT2G24210.11.6e-1243.48 terpene synthase 10[more]
BLAST of Cp4.1LG16g00020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778674229|ref|XP_011650164.1|2.2e-2468.42PREDICTED: myrcene synthase, chloroplastic-like [Cucumis sativus][more]
gi|659122006|ref|XP_008460927.1|2.4e-2366.32PREDICTED: terpene synthase 10-like isoform X1 [Cucumis melo][more]
gi|659122008|ref|XP_008460928.1|2.4e-2366.32PREDICTED: (-)-alpha-terpineol synthase-like isoform X2 [Cucumis melo][more]
gi|659122223|ref|XP_008461029.1|2.4e-2366.32PREDICTED: terpene synthase 10-like [Cucumis melo][more]
gi|700206998|gb|KGN62117.1|1.2e-2266.32hypothetical protein Csa_2G299870 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
GO:0010333terpene synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR008930Terpenoid_cyclase/PrenylTrfase
IPR001906Terpene_synth_N
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0010333 terpene synthase activity
molecular_function GO:0016829 lyase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG16g00020.1Cp4.1LG16g00020.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001906Terpene synthase, N-terminal domainGENE3DG3DSA:1.50.30.10coord: 58..86
score: 5.6E-7coord: 90..176
score: 5.1
IPR001906Terpene synthase, N-terminal domainPFAMPF01397Terpene_synthcoord: 55..86
score: 6.7E-7coord: 90..176
score: 3.9
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidunknownSSF48239Terpenoid cyclases/Protein prenyltransferasescoord: 8..86
score: 3.53E-7coord: 86..176
score: 3.69
NoneNo IPR availablePANTHERPTHR31225FAMILY NOT NAMEDcoord: 85..177
score: 5.7
NoneNo IPR availablePANTHERPTHR31225:SF161,8-CINEOLE SYNTHASE 1, CHLOROPLASTIC-RELATEDcoord: 85..177
score: 5.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG16g00020Cla007776Watermelon (97103) v1cpewmB302
Cp4.1LG16g00020Csa2G299330Cucumber (Chinese Long) v2cpecuB268
Cp4.1LG16g00020CsaV3_2G017870Cucumber (Chinese Long) v3cpecucB0335
Cp4.1LG16g00020CsGy2G015400Cucumber (Gy14) v2cgybcpeB199
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG16g00020Cucurbita pepo (Zucchini)cpecpeB068
Cp4.1LG16g00020Cucurbita pepo (Zucchini)cpecpeB295
Cp4.1LG16g00020Cucurbita pepo (Zucchini)cpecpeB313
Cp4.1LG16g00020Cucumber (Gy14) v1cgycpeB0665
Cp4.1LG16g00020Cucurbita maxima (Rimu)cmacpeB565
Cp4.1LG16g00020Cucurbita maxima (Rimu)cmacpeB623
Cp4.1LG16g00020Cucurbita maxima (Rimu)cmacpeB629
Cp4.1LG16g00020Cucurbita maxima (Rimu)cmacpeB660
Cp4.1LG16g00020Cucurbita moschata (Rifu)cmocpeB517
Cp4.1LG16g00020Cucurbita moschata (Rifu)cmocpeB573
Cp4.1LG16g00020Cucurbita moschata (Rifu)cmocpeB578
Cp4.1LG16g00020Wild cucumber (PI 183967)cpecpiB270
Cp4.1LG16g00020Bottle gourd (USVL1VR-Ls)cpelsiB222
Cp4.1LG16g00020Watermelon (Charleston Gray)cpewcgB268
Cp4.1LG16g00020Watermelon (Charleston Gray)cpewcgB274
Cp4.1LG16g00020Watermelon (97103) v1cpewmB284
Cp4.1LG16g00020Watermelon (97103) v1cpewmB288
Cp4.1LG16g00020Melon (DHL92) v3.5.1cpemeB261
Cp4.1LG16g00020Cucumber (Gy14) v2cgybcpeB194
Cp4.1LG16g00020Melon (DHL92) v3.6.1cpemedB305
Cp4.1LG16g00020Silver-seed gourdcarcpeB1132
Cp4.1LG16g00020Silver-seed gourdcarcpeB1472
Cp4.1LG16g00020Silver-seed gourdcarcpeB1474
Cp4.1LG16g00020Cucumber (Chinese Long) v3cpecucB0366
Cp4.1LG16g00020Wax gourdcpewgoB0367
Cp4.1LG16g00020Wax gourdcpewgoB0356