Cp4.1LG15g08870 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g08870
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionZinc finger protein CONSTANS-LIKE 3
LocationCp4.1LG15 : 8567139 .. 8568329 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCATTCCTCAATTCTACTCTGACTATACACCAACGGGCGCAGCAATGTTTCCTAATGATCTCTATGATCTGCCTCCTCCTACAACGCCGTCGACTGCGGGCACTCCTGGCGGCCCATTCTGGGGCGAAGAAACCTTAGTTCCTTTGTTCCACGAGTTTGGCCTTCTTCACCCTCCTTCTCTTTCCCCATCATCCCAATATTGTTGTGATGATAAACCACCGCCACCCCTGTCCTCCGCCATTGATCCCACCTCCTTTCCTCAACTTAATATCCCCTCCATTAATGGAGGACGTCAAAACTCTTGCCTTGATCATCATTTCCATGAATTTCAGGACGATTGCTTTGGATTGGTGCCTGAGATCAAGCCACTTCACCAACCACTCCCTCCCCATAATTGGGTATGTCCACCCATCTCTTTCTTTTGAAGGATACAGATTGAAGAGAAAATTTTAAATTTTGATTTTATAATGTGATATTTATTTACATCCTTGGATATGGGTGAACTTAATGATATAGGAAATCCAAAGCAATGAAGTTCCTGTGGCTGAGGACTCGAACATGAAGGTTGGCCGCTACTCTGAAGAAGTAAGAAAACAAAGGATTCTGCGCTACTTGAAGAAAAGAAACCAAAGAAATTTCACCAAAACCATAAAGGTATCCATGTTAAAATCAACATAATCAACCCCTTTGAATAGTCGAGGTGGGACTTCTCTCCTAATAATTCTCAACAATATTGATATATCATTCGTTTATATAAAACAGTATGCATGTCGGAAAACGTTAGCCGACAGAAGGATTCGAGTCCGAGGGAGATTTGCAAGGAACAACGAAGCATGTGATCAAGAACCTAATCCAGCAAAGAATGATACTTGTATTCTTCACATGGACAATGAATTAGTATACAACCATGAGTTGGGTGTCCAGGTATAAAAAAAAGATTCGAAATGCTAAGTGGTTAAGGTTTCTTTGTTCCAAAAGCTTTCTCTCCTCAAAGTTTTTCTCTTGCTTCGACATATTTTGATTGTGGGTCAAATCCAATACGAAACCCCTTCCACCCACATCCCATTATGCTTCTAATTCAATTATGATAAAATATTCTATCATTTTTGCAGATGAAAAAGGATGAGGAGGAATGGGAACAAGAAATGAGGAGCCTGATGTATTTACCATATATCAATAGTTGA

mRNA sequence

ATGGCTTCCATTCCTCAATTCTACTCTGACTATACACCAACGGGCGCAGCAATGTTTCCTAATGATCTCTATGATCTGCCTCCTCCTACAACGCCGTCGACTGCGGGCACTCCTGGCGGCCCATTCTGGGGCGAAGAAACCTTAGTTCCTTTGTTCCACGAGTTTGGCCTTCTTCACCCTCCTTCTCTTTCCCCATCATCCCAATATTGTTGTGATGATAAACCACCGCCACCCCTGTCCTCCGCCATTGATCCCACCTCCTTTCCTCAACTTAATATCCCCTCCATTAATGGAGGACGTCAAAACTCTTGCCTTGATCATCATTTCCATGAATTTCAGGACGATTGCTTTGGATTGGTGCCTGAGATCAAGCCACTTCACCAACCACTCCCTCCCCATAATTGGGAAATCCAAAGCAATGAAGTTCCTGTGGCTGAGGACTCGAACATGAAGGTTGGCCGCTACTCTGAAGAAGTAAGAAAACAAAGGATTCTGCGCTACTTGAAGAAAAGAAACCAAAGAAATTTCACCAAAACCATAAAGATGAAAAAGGATGAGGAGGAATGGGAACAAGAAATGAGGAGCCTGATGTATTTACCATATATCAATAGTTGA

Coding sequence (CDS)

ATGGCTTCCATTCCTCAATTCTACTCTGACTATACACCAACGGGCGCAGCAATGTTTCCTAATGATCTCTATGATCTGCCTCCTCCTACAACGCCGTCGACTGCGGGCACTCCTGGCGGCCCATTCTGGGGCGAAGAAACCTTAGTTCCTTTGTTCCACGAGTTTGGCCTTCTTCACCCTCCTTCTCTTTCCCCATCATCCCAATATTGTTGTGATGATAAACCACCGCCACCCCTGTCCTCCGCCATTGATCCCACCTCCTTTCCTCAACTTAATATCCCCTCCATTAATGGAGGACGTCAAAACTCTTGCCTTGATCATCATTTCCATGAATTTCAGGACGATTGCTTTGGATTGGTGCCTGAGATCAAGCCACTTCACCAACCACTCCCTCCCCATAATTGGGAAATCCAAAGCAATGAAGTTCCTGTGGCTGAGGACTCGAACATGAAGGTTGGCCGCTACTCTGAAGAAGTAAGAAAACAAAGGATTCTGCGCTACTTGAAGAAAAGAAACCAAAGAAATTTCACCAAAACCATAAAGATGAAAAAGGATGAGGAGGAATGGGAACAAGAAATGAGGAGCCTGATGTATTTACCATATATCAATAGTTGA

Protein sequence

MASIPQFYSDYTPTGAAMFPNDLYDLPPPTTPSTAGTPGGPFWGEETLVPLFHEFGLLHPPSLSPSSQYCCDDKPPPPLSSAIDPTSFPQLNIPSINGGRQNSCLDHHFHEFQDDCFGLVPEIKPLHQPLPPHNWEIQSNEVPVAEDSNMKVGRYSEEVRKQRILRYLKKRNQRNFTKTIKMKKDEEEWEQEMRSLMYLPYINS
Homology
[Close]
BLAST of Cp4.1LG15g08870 vs. TrEMBL
Match: A0A0A0K3I7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G237850 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.2e-34
Identity = 108/214 (50.47%), Postives = 122/214 (57.01%), Query Frame = 1 

Query: 1   MASIP-QFYSDYTPTGAAMFPNDLYDLPPPTTPSTAGTPGGPFWGEET----LVPLFHE- 60
           MASIP QFY D   T  A         PPPTTPS      G  WG+ET    LVPL  + 
Sbjct: 1   MASIPDQFYHDDQYTSLAA--------PPPTTPSV-----GIGWGDETADDNLVPLLEDD 60

Query: 61  -FGLLHPPSLSPSSQYCCDDKPPPPLSSAIDPT--SFPQLNI----PSINGGRQN----- 120
            FG LH    +  +QY C        S+ ID    SFPQ ++    PS +  + N     
Sbjct: 61  NFGALHHQPYTHPNQYYCS-------SNVIDSATWSFPQQDMLPPFPSAHSHQNNKNARG 120

Query: 121 -SCLDHHFH------------EFQDDCFGLVPEIKP--LHQPLPPHNWEIQSNEVPVAED 180
            SC D + H            EF DDCFGLVPEIKP   + PLP HNW+ QSN+V VAED
Sbjct: 121 SSCQDFNSHLGCQLPDHQLFSEFHDDCFGLVPEIKPSFYNNPLPTHNWDNQSNQVSVAED 180

Query: 181 SNMKVGRYSEEVRKQRILRYLKKRNQRNFTKTIK 182
           SNMKVGRYSEEVRK+RILRYLKKRNQRNF KTIK
Sbjct: 181 SNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIK 194

[Close]
BLAST of Cp4.1LG15g08870 vs. TrEMBL
Match: A0A061FAW4_THECC (Activator of spomin::LUC2, putative OS=Theobroma cacao GN=TCM_032561 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.3e-18
Identity = 97/279 (34.77%), Postives = 119/279 (42.65%), Query Frame = 1 

Query: 1   MASIPQFYSDYTPTGAAMFPNDLYDLPPPTTPS------TAGTPGGPFWGEETL-VPLFH 60
           MAS+PQFYS+Y+      F ND      P   S      +AG   G  WG++ +  P+F 
Sbjct: 1   MASVPQFYSNYS------FSNDFSQFQNPLLISQDNYIGSAGAISGAAWGDQEIGFPMFL 60

Query: 61  EFGL-LHPPSLSPSSQYCCDDKPPPPL----SSAIDPTSFPQLNIPSING--------GR 120
           + G  L  P   P+ +        P L    S    PT FP  N+    G        GR
Sbjct: 61  DNGGGLDVPQQEPNIKSSVPAALFPELIGISSDLAVPTGFPDNNVAGFCGIGTIQNFGGR 120

Query: 121 ---QNSCLDHHFHEFQDDCFGLV-PEIKPLHQPLPPHNWEIQSNEV-PVAEDSNMKVGRY 180
              Q+ C      EF ++C G V  + KP+  P     W IQ N + P  EDSN+KVGRY
Sbjct: 121 YQLQDVC------EFGEECSGFVHQDFKPV-DPTVGETWGIQGNRMQPAMEDSNLKVGRY 180

Query: 181 SEEVRKQRILRYLKKRNQRNFTKTIK---------------------------------- 203
           S E RK RILRYLKKRNQRNF KTIK                                  
Sbjct: 181 SVEERKDRILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNTELCEEEMVMKKE 240

[Close]
BLAST of Cp4.1LG15g08870 vs. TrEMBL
Match: A0A0S3SJX9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G206000 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.1e-17
Identity = 69/189 (36.51%), Postives = 97/189 (51.32%), Query Frame = 1 

Query: 1   MASIPQFYSDYTPTGAAMFPNDLYDLPPPTTPSTAGTPGGPFWG-EETLVPLF--HEFGL 60
           MASIP  Y +YT T      +DL D P P   + A       W  +++ +P+   +   L
Sbjct: 8   MASIPHLYPNYTFT-----THDLSDFPTPHITANASLMENSMWAAQDSFIPVLDINNGAL 67

Query: 61  LHPPSLSPSSQYCCDDKPPPPLSSAIDPTSFPQLNIPSIN--GGRQN--SCLDHHFHEFQ 120
            H  SL   +  C +  P    S  +   S   ++   +   GG QN  +    H  +F 
Sbjct: 68  DHIVSLDCDTMACANWMPS--FSDQVGGLSDLAISDCKMGFYGGFQNFNARYQPHIGDFG 127

Query: 121 DDCFGLVPEIKPLHQP-LPPHNWEIQSNEVPVAEDSNMKVGRYSEEVRKQRILRYLKKRN 180
           ++C   + ++KP   P     NW +Q N++   E+ N+KVGRYSEE RK+RILRYLKKRN
Sbjct: 128 EECCAFLEDVKPPPYPNAARENWGLQGNQIQAVEEPNIKVGRYSEEERKERILRYLKKRN 187

Query: 181 QRNFTKTIK 182
           QRNF KTIK
Sbjct: 188 QRNFNKTIK 189

[Close]
BLAST of Cp4.1LG15g08870 vs. TrEMBL
Match: K7L771_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G168900 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.0e-16
Identity = 76/205 (37.07%), Postives = 97/205 (47.32%), Query Frame = 1 

Query: 1   MASIPQFYSDYTPTGAAMFPNDLYDLPPPTTPSTAGTPG---------GPFWG--EETLV 60
           MASIPQFY +YT T      +DL D P P      G+              WG  +++L+
Sbjct: 8   MASIPQFYQNYTFT-----THDLSDYPTPLLNGGGGSNDIVNASVMDTTTVWGGGQDSLI 67

Query: 61  PL----FHEFGLLHPPSLSPSSQYCCDDKPPPPLSSAIDPTSFPQLNIPSINGG------ 120
            +     +   L H  SL   +  C  +  P   S +     F  L I     G      
Sbjct: 68  NIPVLDMNNGALDHIVSLDCDTMACAANWMP---SFSEQLGGFSDLAISDCKMGFYGGFQ 127

Query: 121 --RQNSCLDHHFHEFQDDCFGLVPEIKPLHQP-LPPHNWEIQSNEVPVAEDSNMKVGRYS 180
               +     H  EF D+C G V ++KP   P     NW IQ N++   E+ N+KVGRYS
Sbjct: 128 SFNNSRSYQPHVGEFGDECCGFVEDVKPPAYPNAARENWGIQGNQMAAIEEPNIKVGRYS 187

Query: 181 EEVRKQRILRYLKKRNQRNFTKTIK 182
           EE RK+RILRYLKKRNQRNF KTIK
Sbjct: 188 EEERKERILRYLKKRNQRNFNKTIK 204

[Close]
BLAST of Cp4.1LG15g08870 vs. TrEMBL
Match: A0A0L9UJ55_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g033000 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-16
Identity = 68/189 (35.98%), Postives = 97/189 (51.32%), Query Frame = 1 

Query: 1   MASIPQFYSDYTPTGAAMFPNDLYDLPPPTTPSTAGTPGGPFWG-EETLVPLF--HEFGL 60
           MASIP  Y +YT T      +DL D P P   + A       W  +++ +P+   +   L
Sbjct: 1   MASIPHLYPNYTFT-----THDLSDFPTPHITANASLMENSMWAAQDSFIPVLDINNGAL 60

Query: 61  LHPPSLSPSSQYCCDDKPPPPLSSAIDPTSFPQLNIPSIN--GGRQN--SCLDHHFHEFQ 120
            H  SL   +  C +  P    S  +   S   ++   +   GG QN  +    H  +F 
Sbjct: 61  DHIVSLDCDTMACANWMPS--FSDQVGGLSDLAISDCKMGFYGGFQNFNARYQPHIGDFG 120

Query: 121 DDCFGLVPEIKPLHQP-LPPHNWEIQSNEVPVAEDSNMKVGRYSEEVRKQRILRYLKKRN 180
           ++C   + ++KP   P     NW +Q N++   E+ N+K+GRYSEE RK+RILRYLKKRN
Sbjct: 121 EECCAFLEDVKPPPYPNAARENWGLQGNQIQAVEEPNIKLGRYSEEERKERILRYLKKRN 180

Query: 181 QRNFTKTIK 182
           QRNF KTIK
Sbjct: 181 QRNFNKTIK 182

[Close]
BLAST of Cp4.1LG15g08870 vs. TAIR10
Match: AT3G12890.1 (AT3G12890.1 activator of spomin::LUC2)

HSP 1 Score: 69.3 bits (168), Expect = 3.1e-12
Identity = 41/96 (42.71%), Postives = 57/96 (59.38%), Query Frame = 1 

Query: 91  LNIPSINGGRQNSCLDHHFHEFQ----DDCFGLVPEIKPLHQPLP-PHNWEIQSNEVPVA 150
           +++P  N   Q   +++  H F      + +G  PEIKPL +P     +W   ++E  + 
Sbjct: 67  VSVPEYNNYYQKMSVNNATHYFHGGDHQEYYGFSPEIKPLFRPATGEQSWG--NSEGGIQ 126

Query: 151 EDSNMKVGRYSEEVRKQRILRYLKKRNQRNFTKTIK 182
            + N KVGRYS E RK RI+RYLKK+NQRNF KTIK
Sbjct: 127 AEPNTKVGRYSVEERKDRIMRYLKKKNQRNFNKTIK 160

[Close]
BLAST of Cp4.1LG15g08870 vs. TAIR10
Match: AT5G41380.1 (AT5G41380.1 CCT motif family protein)

HSP 1 Score: 54.7 bits (130), Expect = 7.8e-08
Identity = 26/44 (59.09%), Postives = 35/44 (79.55%), Query Frame = 1 

Query: 138 QSNEVPVAEDSNMKVGRYSEEVRKQRILRYLKKRNQRNFTKTIK 182
           +++ +P +E+ N KVGRYS E RK++I +Y  KRNQRNFTKTIK
Sbjct: 193 ENSTMPFSEEQNFKVGRYSAEERKEKISKYRAKRNQRNFTKTIK 236

[Close]
BLAST of Cp4.1LG15g08870 vs. NCBI nr
Match: gi|778725985|ref|XP_011659034.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 5 [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 6.0e-34
Identity = 108/214 (50.47%), Postives = 122/214 (57.01%), Query Frame = 1 

Query: 1   MASIP-QFYSDYTPTGAAMFPNDLYDLPPPTTPSTAGTPGGPFWGEET----LVPLFHE- 60
           MASIP QFY D   T  A         PPPTTPS      G  WG+ET    LVPL  + 
Sbjct: 3   MASIPDQFYHDDQYTSLAA--------PPPTTPSV-----GIGWGDETADDNLVPLLEDD 62

Query: 61  -FGLLHPPSLSPSSQYCCDDKPPPPLSSAIDPT--SFPQLNI----PSINGGRQN----- 120
            FG LH    +  +QY C        S+ ID    SFPQ ++    PS +  + N     
Sbjct: 63  NFGALHHQPYTHPNQYYCS-------SNVIDSATWSFPQQDMLPPFPSAHSHQNNKNARG 122

Query: 121 -SCLDHHFH------------EFQDDCFGLVPEIKP--LHQPLPPHNWEIQSNEVPVAED 180
            SC D + H            EF DDCFGLVPEIKP   + PLP HNW+ QSN+V VAED
Sbjct: 123 SSCQDFNSHLGCQLPDHQLFSEFHDDCFGLVPEIKPSFYNNPLPTHNWDNQSNQVSVAED 182

Query: 181 SNMKVGRYSEEVRKQRILRYLKKRNQRNFTKTIK 182
           SNMKVGRYSEEVRK+RILRYLKKRNQRNF KTIK
Sbjct: 183 SNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIK 196

[Close]
BLAST of Cp4.1LG15g08870 vs. NCBI nr
Match: gi|700189037|gb|KGN44270.1| (hypothetical protein Csa_7G237850 [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 6.0e-34
Identity = 108/214 (50.47%), Postives = 122/214 (57.01%), Query Frame = 1 

Query: 1   MASIP-QFYSDYTPTGAAMFPNDLYDLPPPTTPSTAGTPGGPFWGEET----LVPLFHE- 60
           MASIP QFY D   T  A         PPPTTPS      G  WG+ET    LVPL  + 
Sbjct: 1   MASIPDQFYHDDQYTSLAA--------PPPTTPSV-----GIGWGDETADDNLVPLLEDD 60

Query: 61  -FGLLHPPSLSPSSQYCCDDKPPPPLSSAIDPT--SFPQLNI----PSINGGRQN----- 120
            FG LH    +  +QY C        S+ ID    SFPQ ++    PS +  + N     
Sbjct: 61  NFGALHHQPYTHPNQYYCS-------SNVIDSATWSFPQQDMLPPFPSAHSHQNNKNARG 120

Query: 121 -SCLDHHFH------------EFQDDCFGLVPEIKP--LHQPLPPHNWEIQSNEVPVAED 180
            SC D + H            EF DDCFGLVPEIKP   + PLP HNW+ QSN+V VAED
Sbjct: 121 SSCQDFNSHLGCQLPDHQLFSEFHDDCFGLVPEIKPSFYNNPLPTHNWDNQSNQVSVAED 180

Query: 181 SNMKVGRYSEEVRKQRILRYLKKRNQRNFTKTIK 182
           SNMKVGRYSEEVRK+RILRYLKKRNQRNF KTIK
Sbjct: 181 SNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIK 194

[Close]
BLAST of Cp4.1LG15g08870 vs. NCBI nr
Match: gi|659092563|ref|XP_008447123.1| (PREDICTED: uncharacterized protein LOC103489646 [Cucumis melo])

HSP 1 Score: 148.3 bits (373), Expect = 1.5e-32
Identity = 110/223 (49.33%), Postives = 123/223 (55.16%), Query Frame = 1 

Query: 1   MASI--PQFYSDYTPTGAAMFPNDLYDLPPPTTPSTAGTPGGPFWGE-----ETLVPLFH 60
           MASI   QFY D   T +A         PPPT  S     GGPFWG+     + LVPL  
Sbjct: 1   MASIIPDQFYYDDHYTSSAA--------PPPTAASV----GGPFWGDHDETADNLVPLLE 60

Query: 61  E--FGLLH------PPSLSPSSQYCCDDKPPPPLSSAIDPT--SFPQLN-IPSI------ 120
           +  FG LH       P     +QY        P S  IDP   SFPQ + +PS       
Sbjct: 61  DDNFGALHRRRRHHQPYTDHHNQYY-------PSSDIIDPATWSFPQQDMLPSFPSHSHQ 120

Query: 121 ---NGGRQNSCLDHH------------FHEFQDDCFGLVPEIKPL---HQPLPPHNWEIQ 180
              N  R +SC D +            F+EFQDDCFGLVPEIKP    + PLP HN + Q
Sbjct: 121 NNNNNARGSSCQDFNCHLGCQLPYHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQ 180

Query: 181 SNEVPVAEDSNMKVGRYSEEVRKQRILRYLKKRNQRNFTKTIK 182
           SN+V VAEDSNMKVGRYSEEVRKQRILRYLKKRNQRNF KTIK
Sbjct: 181 SNQVSVAEDSNMKVGRYSEEVRKQRILRYLKKRNQRNFNKTIK 204

[Close]
BLAST of Cp4.1LG15g08870 vs. NCBI nr
Match: gi|590612283|ref|XP_007022342.1| (Activator of spomin::LUC2, putative [Theobroma cacao])

HSP 1 Score: 98.6 bits (244), Expect = 1.3e-17
Identity = 97/279 (34.77%), Postives = 119/279 (42.65%), Query Frame = 1 

Query: 1   MASIPQFYSDYTPTGAAMFPNDLYDLPPPTTPS------TAGTPGGPFWGEETL-VPLFH 60
           MAS+PQFYS+Y+      F ND      P   S      +AG   G  WG++ +  P+F 
Sbjct: 1   MASVPQFYSNYS------FSNDFSQFQNPLLISQDNYIGSAGAISGAAWGDQEIGFPMFL 60

Query: 61  EFGL-LHPPSLSPSSQYCCDDKPPPPL----SSAIDPTSFPQLNIPSING--------GR 120
           + G  L  P   P+ +        P L    S    PT FP  N+    G        GR
Sbjct: 61  DNGGGLDVPQQEPNIKSSVPAALFPELIGISSDLAVPTGFPDNNVAGFCGIGTIQNFGGR 120

Query: 121 ---QNSCLDHHFHEFQDDCFGLV-PEIKPLHQPLPPHNWEIQSNEV-PVAEDSNMKVGRY 180
              Q+ C      EF ++C G V  + KP+  P     W IQ N + P  EDSN+KVGRY
Sbjct: 121 YQLQDVC------EFGEECSGFVHQDFKPV-DPTVGETWGIQGNRMQPAMEDSNLKVGRY 180

Query: 181 SEEVRKQRILRYLKKRNQRNFTKTIK---------------------------------- 203
           S E RK RILRYLKKRNQRNF KTIK                                  
Sbjct: 181 SVEERKDRILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNTELCEEEMVMKKE 240

[Close]
BLAST of Cp4.1LG15g08870 vs. NCBI nr
Match: gi|950972556|ref|XP_014500550.1| (PREDICTED: uncharacterized protein LOC106761508 [Vigna radiata var. radiata])

HSP 1 Score: 97.1 bits (240), Expect = 3.9e-17
Identity = 70/189 (37.04%), Postives = 97/189 (51.32%), Query Frame = 1 

Query: 1   MASIPQFYSDYTPTGAAMFPNDLYDLPPPTTPSTAGTPGGPFWG-EETLVPLF--HEFGL 60
           MASIP  Y +YT T      +DL + P P   S A       W  ++T +P+   +   L
Sbjct: 8   MASIPHLYPNYTFT-----THDLSEFPTPHITSNASLIENTIWAAQDTFIPVLDINNGAL 67

Query: 61  LHPPSLSPSSQYCCDDKPPPPLSSAIDPTSFPQLNIPSIN--GGRQN--SCLDHHFHEFQ 120
            H  SL   +  C +  P    S  +   S   ++   +   GG QN  +    H  +F 
Sbjct: 68  DHIVSLDSDTMPCANWMPS--FSDQVGGLSDLAISDCKMGFYGGFQNFNARYQPHIGDFG 127

Query: 121 DDCFGLVPEIKPLHQP-LPPHNWEIQSNEVPVAEDSNMKVGRYSEEVRKQRILRYLKKRN 180
           ++C   + ++KP   P     NW +Q N++   E+ N+KVGRYSEE RK+RILRYLKKRN
Sbjct: 128 EECCAFLEDVKPPPYPNAARENWGLQGNQIQAVEEPNIKVGRYSEEERKERILRYLKKRN 187

Query: 181 QRNFTKTIK 182
           QRNF KTIK
Sbjct: 188 QRNFNKTIK 189

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g08870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG15g08870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3I7_CUCSA4.2e-3450.47Uncharacterized protein OS=Cucumis sativus GN=Csa_7G237850 PE=4 SV=1[more]
A0A061FAW4_THECC9.3e-1834.77Activator of spomin::LUC2, putative OS=Theobroma cacao GN=TCM_032561 PE=4 SV=1[more]
A0A0S3SJX9_PHAAN6.1e-1736.51Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G206000 PE=... [more]
K7L771_SOYBN1.0e-1637.07Uncharacterized protein OS=Glycine max GN=GLYMA_08G168900 PE=4 SV=1[more]
A0A0L9UJ55_PHAAN1.3e-1635.98Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g033000 PE=4 SV=1[more]
BLAST of Cp4.1LG15g08870 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12890.13.1e-1242.71 activator of spomin::LUC2[more]
AT5G41380.17.8e-0859.09 CCT motif family protein[more]
BLAST of Cp4.1LG15g08870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778725985|ref|XP_011659034.1|6.0e-3450.47PREDICTED: zinc finger protein CONSTANS-LIKE 5 [Cucumis sativus][more]
gi|700189037|gb|KGN44270.1|6.0e-3450.47hypothetical protein Csa_7G237850 [Cucumis sativus][more]
gi|659092563|ref|XP_008447123.1|1.5e-3249.33PREDICTED: uncharacterized protein LOC103489646 [Cucumis melo][more]
gi|590612283|ref|XP_007022342.1|1.3e-1734.77Activator of spomin::LUC2, putative [Theobroma cacao][more]
gi|950972556|ref|XP_014500550.1|3.9e-1737.04PREDICTED: uncharacterized protein LOC106761508 [Vigna radiata var. radiata][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016070 RNA metabolic process
biological_process GO:0009987 cellular process
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g08870.1Cp4.1LG15g08870.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31717FAMILY NOT NAMEDcoord: 108..181
score: 5.0
NoneNo IPR availablePANTHERPTHR31717:SF9ACTIVATOR OF SPORAMIN LUC 2coord: 108..181
score: 5.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g08870Cucsa.239670Cucumber (Gy14) v1cgycpeB0632
Cp4.1LG15g08870CmaCh11G019680Cucurbita maxima (Rimu)cmacpeB115
Cp4.1LG15g08870CmaCh19G010900Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g08870CmoCh11G020560Cucurbita moschata (Rifu)cmocpeB093
Cp4.1LG15g08870CmoCh19G011190Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g08870Cla005506Watermelon (97103) v1cpewmB234
Cp4.1LG15g08870Cla013468Watermelon (97103) v1cpewmB265
Cp4.1LG15g08870Csa7G237850Cucumber (Chinese Long) v2cpecuB259
Cp4.1LG15g08870MELO3C012623Melon (DHL92) v3.5.1cpemeB226
Cp4.1LG15g08870ClCG09G022600Watermelon (Charleston Gray)cpewcgB215
Cp4.1LG15g08870CSPI07G10770Wild cucumber (PI 183967)cpecpiB260
Cp4.1LG15g08870Lsi11G016170Bottle gourd (USVL1VR-Ls)cpelsiB201
Cp4.1LG15g08870MELO3C012623.2Melon (DHL92) v3.6.1cpemedB264
Cp4.1LG15g08870MELO3C019654.2Melon (DHL92) v3.6.1cpemedB252
Cp4.1LG15g08870CsaV3_6G013650Cucumber (Chinese Long) v3cpecucB0317
Cp4.1LG15g08870CsaV3_7G022750Cucumber (Chinese Long) v3cpecucB0324
Cp4.1LG15g08870Bhi10G000747Wax gourdcpewgoB0337
Cp4.1LG15g08870Bhi05G001746Wax gourdcpewgoB0328
Cp4.1LG15g08870CsGy7G010130Cucumber (Gy14) v2cgybcpeB912
Cp4.1LG15g08870CsGy6G011330Cucumber (Gy14) v2cgybcpeB750
Cp4.1LG15g08870Carg15666Silver-seed gourdcarcpeB0751
Cp4.1LG15g08870Carg13653Silver-seed gourdcarcpeB0042
Cp4.1LG15g08870Carg04676Silver-seed gourdcarcpeB0541
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG15g08870Cp4.1LG04g02210Cucurbita pepo (Zucchini)cpecpeB267
Cp4.1LG15g08870Cp4.1LG05g15630Cucurbita pepo (Zucchini)cpecpeB277
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g08870Silver-seed gourdcarcpeB0464
Cp4.1LG15g08870Cucurbita pepo (Zucchini)cpecpeB256
Cp4.1LG15g08870Cucumber (Gy14) v1cgycpeB0288
Cp4.1LG15g08870Cucurbita maxima (Rimu)cmacpeB558
Cp4.1LG15g08870Cucurbita moschata (Rifu)cmocpeB512
Cp4.1LG15g08870Cucurbita moschata (Rifu)cmocpeB567
Cp4.1LG15g08870Wild cucumber (PI 183967)cpecpiB252
Cp4.1LG15g08870Cucumber (Chinese Long) v2cpecuB252
Cp4.1LG15g08870Bottle gourd (USVL1VR-Ls)cpelsiB198
Cp4.1LG15g08870Watermelon (Charleston Gray)cpewcgB230
Cp4.1LG15g08870Melon (DHL92) v3.5.1cpemeB211