Cp4.1LG15g06930 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g06930
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRho GDP-dissociation inhibitor 1
LocationCp4.1LG15 : 7543347 .. 7546623 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAATACATATTTGTGGAGCTTGTGCAACTTCCGAGTAGGCTTTCAATTCAAACTAAAATTCCCCGCAATTCTCTGCGCTAATTCTTCCCCCGCTATGAAATTTTCAAATCCCACAATCTTTCTCTCTTTCCTTTGCAGCTGCCATCGCCATAACAATCAATGAATCCAGTTCTTCATTGCTTTATGCTTCCTACGCTCTCTCTTTCTCTTTCGGCCATTTCGGATCACCACACGACTTTCTCTTCGTCCCAAACCCCAAACCAGATCCTAGTTCTTGTTCGTTCCTGTTCTTTTCCCCTTTCCCTTTCTGGGTCTTGTCTGTTCCCTTGCTCCACAAAAATTGGAAGAGATCCACCCCTGTTTTTGACCCATTCTTTCAATTTCTTTACTGGGTTTTCTCGTAAGGGAACGATGAGTAATTAGAGCTTGTTTATGTTCTAATTTGTTGGGTATTTTGTGGGTTTTGTTCTGTTTCTTTGTGTTGGTTTAACCCTTTGAATGTCTTTGGCTGTTGGGGCGGCTTTGGATTCCAAGAACATGGGGTTCGATGAGAACCGTGAGGAGGGAGAATCATTGGATAGCCATGGGAAGGGGAATGAAGCTGAGAAGATTGGTGGGCAAATGAGTGAAAATTCTGTTTATGCAACGGAGGATGAGGGTGATGATGAAGGAACCAAAATCGAGTTGGGGCCTCAACTCACATTGAAAGAAGAGCTTGAAAAGGATAAGGTTAATCTTGTTCTTGTTCTTGTTCTAACATTCAAGATTGTTTTGTAATCAATTTTCTTCGTGTATAAGCTTCGTTTCTGTTCTTTTGTGGTATGTAAGTTTAGGATGATGAGAGTCTGAGGAGGTGGAAGGAGCAGCTTATTGGGACTGTGGATTTAGAAAACGCTGGAGGTAATTATAACTTAGAATTCTTCCTTTGTGTTTTCAATGTATGTCATTGTTATGAAATGTGAGATCTTACATTGGTTGGAGAAGCATTCTTTAGAAGGGTGTGGAAATCTTTCTCTAACAAGACCGTGAGGAAAGCCCAAAGATAATAGCCCCAGCGGTGGGCTTAGGCAGTTATGAGATCTTACATTGGTTGGAGAAGCATTCTTTAGAAGGGTGTGGAAACCTTTCTCTAACAAAACCGTGAGGAAAGCCCAAAGATAATAGCCCCAGCGGTGGGCTTAGGCAGTTATGAGATCTTACATTGGTTGGAGAAGCATTCTTTAGAAGGGTGTGGAAACCTTTCTCTAACAAAACCGTGAGGAAAGCCCAAAGATAATAGCCCCAGCGGTGGGCTTAGGCAGTTACGACGGTGTGCCAGTGAGGATGCTGGCCCACAAGGGGGTGAGTGTGAGATGAGATCCCACGTCGGTTGGAGAAGGGATTGTGAGAACCCACGTCGGTTGGAGAGGGGAACAAAGCATTCCTTATAAGAGTGTGGAAACCTCTCATACCTCTCCTATCAGACCCAAATGGGGAAATTCATAAGGAAAAACTTAGAGAAGACAATATCGGCTAGCACTGAGCTTGGGCTATTGCAAGCCTAGGGAGAAGTTTCCACACTTTTATAAGGAACGTGCTTCAAGGATGTGGGATCTCACATAAAATACTTATCTTATCTCGAGGTTTCTGCAGCCATATAGCTTTTCTTTTGGCTTGGTTTTGTTTGTGAGTTCCAATTCTTATGTGTTTTTGTAGAAACTGTTGAGCCAGAGGTGAAGATTCTAAGTCTGTCAATAGTGGCACCTGAGAGACCAGACTTGGTTCTTCCCATTCCGGAAGATGGGAACCTGAAAGGGCTGTGGTTTACCCTGAAAGAAGGCAGTCCTTACAACCTGAAATTCTCCTTCCAAGTCAATAAAAACATTGTTGCAGGCCTCAAGTACACCAACACTGTCTGGAAAACTGGTGTCAAAGGTTTGTTTCTATGTCTGATTCGTCTCTTCGTTTATACAAGTTCGAGTTTCGATGATTCGTAACTCGTGTTTGTTTCAGTTGACAGCTCCAAAGAGATGCTTGGAACTTTCAGTCCCCAGGTAGAGGCCTATACTCATGTAATGCCAGAGGACACCACGCCCTCTGGCATGTTCGCCCGTGGATCATATTCAGCAAGATCTAAGGTCAGCTTGTTTTTGTAACTCTTGAACTTCTGTGATATTGTCACATAACAATGCCTTGCTCATGAACACAAAAGCCTTTCACATTATTCCCATGTCTTCATGCTGTCCAAATCATGTGGCCCCATGATTCCATTTATTGATACCTGTTCTTCTGTCCAGCCATGTTCTTCTATACAATATATGCTATACAACCCCCTCTCCTCATTCAAAACCCGCACCACTTTGCACACGATATTGTCTGCTTTGCCCCGTTACGTATTATCGTCAGTTTCATGGTTTTAAAATGCCTCTACTATGGAGAGAGTCTAGCCCTACTCCAACCAGTGCCTCACACTTCCCGGTGATTGACTCTGATACCATTTGTACCAGCCGAAGCCCACTAGTAGTAGATTTGTACAGTCTGTGAGGTTTGTTGGATGATGAAAGTCTCACATCGACTAATTTAGAGATCATGGGTTTATAAGCAAAGAATACTCTCTCCATTGGTACGAGGCCTTTTGGGGAAGTCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGATAATATCATACCATTGTGGAGAGTCGTGTTTGTCTAACAAGGCTTAGACTGATACACTTCTTTTGACAAACCTTCCTTGTTCTCAAAAAACTTTCTTGATCTTACCCTTTTCATTCCATAACGAGGTTCCTCAAACCTCGATTCAAACGGTGTATAACTCGAAACCGAATGGAACGTTTTCCTCGAAGCATCTTCAATGGAGGAACTTTTTCCCTGAACTTTGATGTTTCTCATGAAAAAAATGAGGATTTTCCATTGTTGTTCATATCATTTTGGCTCAAGAACAGCTCTATATTTGTAGTTATAATGAAGTATGAATAGCTTTTTGTGTATGTTTTTGCAGTTTGTTGATGATGATAACAAGTGTTACTTGGAAATCAACTACACATTTGATATCAGAAAGGAGTGGGCTGCAACATAAATAAGCCAATGATTAGCCTGAGGAGCAGTGATGTTCTGTTCTGTTCTTAACCTGCCATTTTAGTCAATTAATTTCTCTTTTAATTACATGTAATTATAATTAAGGCCAACAAGCTTGTTAATTGCTAGGTATTTGCTGCATCCAAACTCTTACAGGTTTCCAGTGGTTGGGATGAGAAGTTGAATGAATGGAAAA

mRNA sequence

GAATACATATTTGTGGAGCTTGTGCAACTTCCGAGTAGGCTTTCAATTCAAACTAAAATTCCCCGCAATTCTCTGCGCTAATTCTTCCCCCGCTATGAAATTTTCAAATCCCACAATCTTTCTCTCTTTCCTTTGCAGCTGCCATCGCCATAACAATCAATGAATCCAGTTCTTCATTGCTTTATGCTTCCTACGCTCTCTCTTTCTCTTTCGGCCATTTCGGATCACCACACGACTTTCTCTTCGTCCCAAACCCCAAACCAGATCCTAGTTCTTGTTCGTTCCTGTTCTTTTCCCCTTTCCCTTTCTGGGTCTTGTCTGTTCCCTTGCTCCACAAAAATTGGAAGAGATCCACCCCTGTTTTTGACCCATTCTTTCAATTTCTTTACTGGGTTTTCTCGTAAGGGAACGATGAGTAATTAGAGCTTGTTTATGTTCTAATTTGTTGGGTATTTTGTGGGTTTTGTTCTGTTTCTTTGTGTTGGTTTAACCCTTTGAATGTCTTTGGCTGTTGGGGCGGCTTTGGATTCCAAGAACATGGGGTTCGATGAGAACCGTGAGGAGGGAGAATCATTGGATAGCCATGGGAAGGGGAATGAAGCTGAGAAGATTGGTGGGCAAATGAGTGAAAATTCTGTTTATGCAACGGAGGATGAGGGTGATGATGAAGGAACCAAAATCGAGTTGGGGCCTCAACTCACATTGAAAGAAGAGCTTGAAAAGGATAAGCTTCGTTTCTGTTCTTTTGTGGTATAAACTGTTGAGCCAGAGGTGAAGATTCTAAGTCTGTCAATAGTGGCACCTGAGAGACCAGACTTGGTTCTTCCCATTCCGGAAGATGGGAACCTGAAAGGGCTGTGGTTTACCCTGAAAGAAGGCAGTCCTTACAACCTGAAATTCTCCTTCCAAGTCAATAAAAACATTGTTGCAGGCCTCAAGTACACCAACACTGTCTGGAAAACTGGTGTCAAAGTTGACAGCTCCAAAGAGATGCTTGGAACTTTCAGTCCCCAGGTAGAGGCCTATACTCATGTAATGCCAGAGGACACCACGCCCTCTGGCATGTTCGCCCGTGGATCATATTCAGCAAGATCTAAGTTTGTTGATGATGATAACAAGTGTTACTTGGAAATCAACTACACATTTGATATCAGAAAGGAGTGGGCTGCAACATAAATAAGCCAATGATTAGCCTGAGGAGCAGTGATGTTCTGTTCTGTTCTTAACCTGCCATTTTAGTCAATTAATTTCTCTTTTAATTACATGTAATTATAATTAAGGCCAACAAGCTTGTTAATTGCTAGGTATTTGCTGCATCCAAACTCTTACAGGTTTCCAGTGGTTGGGATGAGAAGTTGAATGAATGGAAAA

Coding sequence (CDS)

ATGTCTTTGGCTGTTGGGGCGGCTTTGGATTCCAAGAACATGGGGTTCGATGAGAACCGTGAGGAGGGAGAATCATTGGATAGCCATGGGAAGGGGAATGAAGCTGAGAAGATTGGTGGGCAAATGAGTGAAAATTCTGTTTATGCAACGGAGGATGAGGGTGATGATGAAGGAACCAAAATCGAGTTGGGGCCTCAACTCACATTGAAAGAAGAGCTTGAAAAGGATAAGCTTCGTTTCTGTTCTTTTGTGGTATAA

Protein sequence

MSLAVGAALDSKNMGFDENREEGESLDSHGKGNEAEKIGGQMSENSVYATEDEGDDEGTKIELGPQLTLKEELEKDKLRFCSFVV
Homology
[Close]
BLAST of Cp4.1LG15g06930 vs. Swiss-Prot
Match: GDIR_ARATH (Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana GN=GDI1 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 9.9e-07
Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = 1 

Query: 1  MSLAVGAALDSKNMGFDENREEGESLDSHGKGNEA------EKIGGQMSENSVYATEDEG 60
          MSL  GA    ++MGFD+N     + D   + + +      + +  QMSE+S+ ATE+E 
Sbjct: 1  MSLVSGA----RDMGFDDNNNNKNNKDGDDENSSSRTRADDDALSRQMSESSLCATEEEE 60

Query: 61 DDEGTKIELGPQLTLKEELEKDK 78
          DD+ +K++LGPQ T+KE LEKDK
Sbjct: 61 DDD-SKLQLGPQYTIKEHLEKDK 78

[Close]
BLAST of Cp4.1LG15g06930 vs. TrEMBL
Match: A0A0A0K6K3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037500 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.8e-21
Identity = 61/78 (78.21%), Postives = 66/78 (84.62%), Query Frame = 1 

Query: 1  MSLAVGAALDSKNMGFDENREEGESLDSHGKGNEA-EKIGGQMSENSVYATEDEGDDEGT 60
          MSLAVGAA +SKNMGFDENREEG +LD+HG  NEA EKI  QMSE S+ ATEDE DDEG+
Sbjct: 1  MSLAVGAASNSKNMGFDENREEGGALDNHGNENEATEKISRQMSETSLSATEDETDDEGS 60

Query: 61 KIELGPQLTLKEELEKDK 78
           IELGPQ TLKEELEKDK
Sbjct: 61 NIELGPQRTLKEELEKDK 78

[Close]
BLAST of Cp4.1LG15g06930 vs. TrEMBL
Match: V4UL76_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016372mg PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.5e-09
Identity = 47/88 (53.41%), Postives = 53/88 (60.23%), Query Frame = 1 

Query: 1  MSLAVGAALDSKNMGFDENREEGESLDSH--------GKGNEAEKIGG---QMSENSVYA 60
          MSLAVG    SKNMG D+  +  ES  S          + N  E+ GG   QMSENS+  
Sbjct: 1  MSLAVGVDSSSKNMGLDDKDKSNESEVSGETMPKTPPNEENVDEQSGGMSRQMSENSISV 60

Query: 61 TEDEGDDEGTKIELGPQLTLKEELEKDK 78
          TEDE DDE  KIELGPQ TLKE+ EKDK
Sbjct: 61 TEDEEDDEDRKIELGPQYTLKEQFEKDK 88

[Close]
BLAST of Cp4.1LG15g06930 vs. TrEMBL
Match: A0A067GIF0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025457mg PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.3e-09
Identity = 48/88 (54.55%), Postives = 56/88 (63.64%), Query Frame = 1 

Query: 1  MSLAVGAALDSKNMGFDE----NREE--GESLDSH--GKGNEAEKIGG---QMSENSVYA 60
          MSLAVG    SKNMG D+    N+ E  GE++      + N  E+ GG   QMSENS+  
Sbjct: 1  MSLAVGVDSSSKNMGLDDKDKSNKSEVSGETMPKTPPNEENVDEQSGGMSRQMSENSISV 60

Query: 61 TEDEGDDEGTKIELGPQLTLKEELEKDK 78
          TEDE DDE  KIELGPQ TLKE+ EKDK
Sbjct: 61 TEDEEDDEDRKIELGPQYTLKEQFEKDK 88

[Close]
BLAST of Cp4.1LG15g06930 vs. TrEMBL
Match: A0A067GSZ1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025457mg PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.3e-09
Identity = 48/88 (54.55%), Postives = 56/88 (63.64%), Query Frame = 1 

Query: 1  MSLAVGAALDSKNMGFDE----NREE--GESLDSH--GKGNEAEKIGG---QMSENSVYA 60
          MSLAVG    SKNMG D+    N+ E  GE++      + N  E+ GG   QMSENS+  
Sbjct: 1  MSLAVGVDSSSKNMGLDDKDKSNKSEVSGETMPKTPPNEENVDEQSGGMSRQMSENSISV 60

Query: 61 TEDEGDDEGTKIELGPQLTLKEELEKDK 78
          TEDE DDE  KIELGPQ TLKE+ EKDK
Sbjct: 61 TEDEEDDEDRKIELGPQYTLKEQFEKDK 88

[Close]
BLAST of Cp4.1LG15g06930 vs. TrEMBL
Match: A0A067GSM0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025457mg PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.3e-09
Identity = 48/88 (54.55%), Postives = 56/88 (63.64%), Query Frame = 1 

Query: 1  MSLAVGAALDSKNMGFDE----NREE--GESLDSH--GKGNEAEKIGG---QMSENSVYA 60
          MSLAVG    SKNMG D+    N+ E  GE++      + N  E+ GG   QMSENS+  
Sbjct: 1  MSLAVGVDSSSKNMGLDDKDKSNKSEVSGETMPKTPPNEENVDEQSGGMSRQMSENSISV 60

Query: 61 TEDEGDDEGTKIELGPQLTLKEELEKDK 78
          TEDE DDE  KIELGPQ TLKE+ EKDK
Sbjct: 61 TEDEEDDEDRKIELGPQYTLKEQFEKDK 88

[Close]
BLAST of Cp4.1LG15g06930 vs. TAIR10
Match: AT3G07880.1 (AT3G07880.1 Immunoglobulin E-set superfamily protein)

HSP 1 Score: 53.9 bits (128), Expect = 5.6e-08
Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = 1 

Query: 1  MSLAVGAALDSKNMGFDENREEGESLDSHGKGNEA------EKIGGQMSENSVYATEDEG 60
          MSL  GA    ++MGFD+N     + D   + + +      + +  QMSE+S+ ATE+E 
Sbjct: 1  MSLVSGA----RDMGFDDNNNNKNNKDGDDENSSSRTRADDDALSRQMSESSLCATEEEE 60

Query: 61 DDEGTKIELGPQLTLKEELEKDK 78
          DD+ +K++LGPQ T+KE LEKDK
Sbjct: 61 DDD-SKLQLGPQYTIKEHLEKDK 78

[Close]
BLAST of Cp4.1LG15g06930 vs. NCBI nr
Match: gi|659110981|ref|XP_008455513.1| (PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis melo])

HSP 1 Score: 114.0 bits (284), Expect = 1.3e-22
Identity = 62/78 (79.49%), Postives = 68/78 (87.18%), Query Frame = 1 

Query: 1  MSLAVGAALDSKNMGFDENREEGESLDSHGKGNEA-EKIGGQMSENSVYATEDEGDDEGT 60
          MSLAVGAA +SKNMGFDENREEG++LD+HG  NEA EKI  QMSE S+Y TEDE DDEG+
Sbjct: 1  MSLAVGAASNSKNMGFDENREEGDALDNHGNENEATEKISRQMSETSLYGTEDETDDEGS 60

Query: 61 KIELGPQLTLKEELEKDK 78
          KIELGPQ TLKEELEKDK
Sbjct: 61 KIELGPQRTLKEELEKDK 78

[Close]
BLAST of Cp4.1LG15g06930 vs. NCBI nr
Match: gi|449453577|ref|XP_004144533.1| (PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis sativus])

HSP 1 Score: 108.6 bits (270), Expect = 5.4e-21
Identity = 61/78 (78.21%), Postives = 66/78 (84.62%), Query Frame = 1 

Query: 1  MSLAVGAALDSKNMGFDENREEGESLDSHGKGNEA-EKIGGQMSENSVYATEDEGDDEGT 60
          MSLAVGAA +SKNMGFDENREEG +LD+HG  NEA EKI  QMSE S+ ATEDE DDEG+
Sbjct: 1  MSLAVGAASNSKNMGFDENREEGGALDNHGNENEATEKISRQMSETSLSATEDETDDEGS 60

Query: 61 KIELGPQLTLKEELEKDK 78
           IELGPQ TLKEELEKDK
Sbjct: 61 NIELGPQRTLKEELEKDK 78

[Close]
BLAST of Cp4.1LG15g06930 vs. NCBI nr
Match: gi|1009107241|ref|XP_015878638.1| (PREDICTED: rho GDP-dissociation inhibitor 1 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 72.8 bits (177), Expect = 3.3e-10
Identity = 47/89 (52.81%), Postives = 54/89 (60.67%), Query Frame = 1 

Query: 1  MSLAVGAALDSKNMGFDENREEGESLDSHGK------GNEAEKIGGQ------MSENSVY 60
          MSLAVGA   S +MGFDE  +  E+ +   K      G   E + G       MSE S+Y
Sbjct: 1  MSLAVGAVSSSTSMGFDEKGDGAENAEVSEKKTVAETGLAEENVDGTEGMIRTMSETSIY 60

Query: 61 ATEDEGDDEGTKIELGPQLTLKEELEKDK 78
          ATEDE DDEG KIELGPQ TLKE +EKDK
Sbjct: 61 ATEDEEDDEGKKIELGPQYTLKEHIEKDK 89

[Close]
BLAST of Cp4.1LG15g06930 vs. NCBI nr
Match: gi|1009107239|ref|XP_015878629.1| (PREDICTED: rho GDP-dissociation inhibitor 1 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 72.8 bits (177), Expect = 3.3e-10
Identity = 47/89 (52.81%), Postives = 54/89 (60.67%), Query Frame = 1 

Query: 1  MSLAVGAALDSKNMGFDENREEGESLDSHGK------GNEAEKIGGQ------MSENSVY 60
          MSLAVGA   S +MGFDE  +  E+ +   K      G   E + G       MSE S+Y
Sbjct: 1  MSLAVGAVSSSTSMGFDEKGDGAENAEVSEKKTVAETGLAEENVDGTEGMIRTMSETSIY 60

Query: 61 ATEDEGDDEGTKIELGPQLTLKEELEKDK 78
          ATEDE DDEG KIELGPQ TLKE +EKDK
Sbjct: 61 ATEDEEDDEGKKIELGPQYTLKEHIEKDK 89

[Close]
BLAST of Cp4.1LG15g06930 vs. NCBI nr
Match: gi|747078150|ref|XP_011086231.1| (PREDICTED: rho GDP-dissociation inhibitor 1-like [Sesamum indicum])

HSP 1 Score: 72.0 bits (175), Expect = 5.6e-10
Identity = 48/83 (57.83%), Postives = 54/83 (65.06%), Query Frame = 1 

Query: 1  MSLAVGAALDSKNMGFDENREEGESLDSHGKGNEA-----EKIGGQMSENSVYATEDEGD 60
          MSLAVG A  SK MGFDEN+ EG   +   KGNE+       I  +MSE S+Y TEDE D
Sbjct: 1  MSLAVGVASSSKGMGFDENKAEGSETN---KGNESGGDNEGSISRKMSEASLYTTEDEDD 60

Query: 61 -DEGTKIELGPQLTLKEELEKDK 78
           D  TKI+LGPQ TLKE  EKDK
Sbjct: 61 EDTETKIQLGPQCTLKELSEKDK 80

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g06930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GDIR_ARATH9.9e-0742.17Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana GN=GDI1 PE=1 SV=1[more]
BLAST of Cp4.1LG15g06930 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6K3_CUCSA3.8e-2178.21Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037500 PE=4 SV=1[more]
V4UL76_9ROSI2.5e-0953.41Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016372mg PE=4 SV=1[more]
A0A067GIF0_CITSI4.3e-0954.55Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025457mg PE=4 SV=1[more]
A0A067GSZ1_CITSI4.3e-0954.55Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025457mg PE=4 SV=1[more]
A0A067GSM0_CITSI4.3e-0954.55Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025457mg PE=4 SV=1[more]
BLAST of Cp4.1LG15g06930 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G07880.15.6e-0842.17 Immunoglobulin E-set superfamily protein[more]
BLAST of Cp4.1LG15g06930 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110981|ref|XP_008455513.1|1.3e-2279.49PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis melo][more]
gi|449453577|ref|XP_004144533.1|5.4e-2178.21PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis sativus][more]
gi|1009107241|ref|XP_015878638.1|3.3e-1052.81PREDICTED: rho GDP-dissociation inhibitor 1 isoform X2 [Ziziphus jujuba][more]
gi|1009107239|ref|XP_015878629.1|3.3e-1052.81PREDICTED: rho GDP-dissociation inhibitor 1 isoform X1 [Ziziphus jujuba][more]
gi|747078150|ref|XP_011086231.1|5.6e-1057.83PREDICTED: rho GDP-dissociation inhibitor 1-like [Sesamum indicum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005094Rho GDP-dissociation inhibitor activity
Vocabulary: INTERPRO
TermDefinition
IPR000406Rho_GDI
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0008150 biological_process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005094 Rho GDP-dissociation inhibitor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g06930.1Cp4.1LG15g06930.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000406Rho protein GDP-dissociation inhibitorPANTHERPTHR10980RHO GDP-DISSOCIATION INHIBITORcoord: 8..77
score: 5.6
NoneNo IPR availablePANTHERPTHR10980:SF19SUBFAMILY NOT NAMEDcoord: 8..77
score: 5.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g06930MELO3C018889.2Melon (DHL92) v3.6.1cpemedB261
Cp4.1LG15g06930CsaV3_7G002870Cucumber (Chinese Long) v3cpecucB0322
Cp4.1LG15g06930Bhi05G001258Wax gourdcpewgoB0326
Cp4.1LG15g06930CsGy7G002670Cucumber (Gy14) v2cgybcpeB910
Cp4.1LG15g06930Carg04165Silver-seed gourdcarcpeB0281
Cp4.1LG15g06930Carg18059Silver-seed gourdcarcpeB1481
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG15g06930Cp4.1LG04g04110Cucurbita pepo (Zucchini)cpecpeB267
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g06930Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g06930Wild cucumber (PI 183967)cpecpiB257
Cp4.1LG15g06930Cucumber (Chinese Long) v2cpecuB257
Cp4.1LG15g06930Bottle gourd (USVL1VR-Ls)cpelsiB194
Cp4.1LG15g06930Bottle gourd (USVL1VR-Ls)cpelsiB199
Cp4.1LG15g06930Watermelon (Charleston Gray)cpewcgB233
Cp4.1LG15g06930Watermelon (97103) v1cpewmB268
Cp4.1LG15g06930Melon (DHL92) v3.5.1cpemeB214
Cp4.1LG15g06930Melon (DHL92) v3.5.1cpemeB223
Cp4.1LG15g06930Silver-seed gourdcarcpeB0484
Cp4.1LG15g06930Wax gourdcpewgoB0336
Cp4.1LG15g06930Cucurbita pepo (Zucchini)cpecpeB255
Cp4.1LG15g06930Cucumber (Gy14) v1cgycpeB0497
Cp4.1LG15g06930Cucurbita maxima (Rimu)cmacpeB118
Cp4.1LG15g06930Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g06930Cucurbita maxima (Rimu)cmacpeB560
Cp4.1LG15g06930Cucurbita moschata (Rifu)cmocpeB093